mRNA_P-fluviatile_contig9.15243.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15243.1
Unique NamemRNA_P-fluviatile_contig9.15243.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A6H5K9Y9_9PHAE (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y9_9PHAE)

HSP 1 Score: 348 bits (894), Expect = 2.190e-108
Identity = 218/366 (59.56%), Postives = 246/366 (67.21%), Query Frame = 2
Query: 1067 GIPTACGSSAPIFPPPPPTATRAPRVYLGGANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRS--------------GGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGL-DTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDS--GGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARE-SEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAFWSAR 2110
            G+P       P   P P   TRAPRVYL GANLHVGQTVQL+ EQTRYLVSVMR+R GS VRVFDGVNGEFLA V +  S              G GRG               + VELRV+ LTRRQPG        + D   P +EL+FAPIRKQRLKMLVEKAVE+GASRLTPV+TARTQKGAV+D+  LD+LG VTAVEAAEQCERMTVP V A+PV L S L  LEL+ S+    S  G A+  GG        LP  +FVCKERD DAPPLLEALAEY +  SEE   D    + G      NA AAFL+GPEGGFDP EI ++A YPFVRFVSLG +VLRAETAAVYALSSW+AFW++R
Sbjct:  121 GVPARIAGVNPALVPLPSPPTRAPRVYLNGANLHVGQTVQLTPEQTRYLVSVMRLRDGSPVRVFDGVNGEFLAAVATSSSTSSSSRLERSGEKIGSGRGGRRGRGKRSTVGADKV-VELRVECLTRRQPGIGGGGDGEVEDVDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPV-ASPVTLASYLRSLELRQSSCDLSSIIGLARDRGGD-----LSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEERRQDHVNSSDGS----RNANAAFLIGPEGGFDPDEIGALAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWASR 475          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: D7G8G1_ECTSI (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8G1_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 1.940e-85
Identity = 179/309 (57.93%), Postives = 209/309 (67.64%), Query Frame = 2
Query: 1223 MRVRAGSLVRVFDGVNGEFLAVVTSGRS------------GGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGL-DTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARE-SEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAFWSA 2107
            MR+R G+ VRVFDGVNGEFLA V +  S            G GRG               + +ELRV+ LTRRQPG        + D   P +EL+FAPIRKQRLKMLVEKAVE+GASRLTPV+TARTQKGAV+D+  LD+LG VTAVEAAEQCERMTVP + A+PV L S L  LEL+ S+  G S    L   +DG   R LP  +FVCKERD DAPPLLEALAEY +  SE+   D    +        NA AAFL+GPEGGFDP EI ++A YPFVRFVSLG +VLRAETAAVYALSSW+AFW++
Sbjct:    1 MRLRDGNPVRVFDGVNGEFLAAVATSSSSSSRLERSGEKIGSGRGGRRGRGKRSAGGAEKV-IELRVECLTRRQPGIGGGGGGEVEDLDAPEIELVFAPIRKQRLKMLVEKAVEVGASRLTPVLTARTQKGAVSDASMLDRLGAVTAVEAAEQCERMTVPPM-ASPVTLASYLRSLELRHSSCDGSSI-VGLARDRDGD--RSLPDIVFVCKERDVDAPPLLEALAEYEQAFSEQRRQDHVNSSDD----NRNANAAFLIGPEGGFDPDEIGTLAQYPFVRFVSLGRTVLRAETAAVYALSSWSAFWAS 300          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A835ZHN8_9STRA (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHN8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.820e-31
Identity = 113/301 (37.54%), Postives = 156/301 (51.83%), Query Frame = 2
Query: 1223 MRVRAGSLVRVFDGVNGEFLAVV--TSGRSGG---GRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAK-AAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAFWSA 2107
            MR+R GS VR F+G +GE+L  +  T G S     G+G+ S              + L+V++  R Q          LD     V L+ API++QR+K+LVEKA E+G + + PV+TA TQ+    D++   +L L  A+EAAEQCER+++P +   P PL  LL     +   R                        LFVC+ER   +PPLLEALA                A      P +A  AAFLVGPEGGF   E   +A  P+++ VSLG +VLRAETAA+YALS +++F +A
Sbjct:    1 MRLRDGSTVRAFNGRDGEYLCTLSQTDGSSSSKPAGKGRRSAKPA----------LALQVEQQLRSQA---EDSCADLD-----VWLLCAPIKRQRMKLLVEKATELGVTCIAPVLTAHTQEAL--DAEGTSRL-LPIAIEAAEQCERLSLPHLHP-PAPLPELLARWHSEPHTRARQ---------------------LFVCQERSPQSPPLLEALAA---------------ASAARGVPSSAAPAAFLVGPEGGFSADEREMLAGLPWIQGVSLGATVLRAETAALYALSCYSSFAAA 243          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A3D6A1M1_9PROT (Ribosomal RNA small subunit methyltransferase E n=2 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3D6A1M1_9PROT)

HSP 1 Score: 128 bits (321), Expect = 1.750e-29
Identity = 122/322 (37.89%), Postives = 152/322 (47.20%), Query Frame = 2
Query: 1136 PRVYLGGANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLL----EDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSW 2089
            PR+Y+  A L  G  + L  EQ  YLV+VMR  AGS VRVF+G +GE+ AVV      G                  LQVE R+    R Q             GVP + L FAP++K R   +VEKA E+GA+ + PV+T RTQ   V      D+L +  A EAAEQ ER+ +P V + PV L  LL    ED  L      GD  GA   GG  G  R                  P+L+ L          E D SG                L+GPEGGFD AE + +   PFVR V+LGP +LRA+TAAV AL+ W
Sbjct:    5 PRLYVD-APLDDGAELILPREQAHYLVNVMRREAGSPVRVFNGRDGEWQAVVADASRKGAS----------------LQVETRL----REQ------------VGVPPLRLCFAPVKKARTDFIVEKATELGAAVIQPVITRRTQSERVRT----DRL-MALATEAAEQTERLCLPVV-SEPVTLERLLADWPEDHRLIFCDEAGDGEGA--WGGPQGRAR------------------PMLDVLR--------AEPDPSGPW------------TVLIGPEGGFDDAERARLRSLPFVRAVTLGPRILRADTAAVAALTLW 247          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A2E4XSR1_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XSR1_9PROT)

HSP 1 Score: 126 bits (317), Expect = 6.310e-29
Identity = 114/334 (34.13%), Postives = 159/334 (47.60%), Query Frame = 2
Query: 1121 TATRAPRVYLGGANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSXXXXXXXXXXXXLQVELRV-DKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAFWSARKRR 2119
            T  RA R+Y+  A L  G++V LS  Q+ YL  V+R+  G+ V +F+G +GE+ A + + R   G                 L VE ++  ++T                  P + L+FAPI++ RL MLV+KAVE+G SRL PV+T RT+   +   +    L     +EAAEQCERMT+P +   P P+L +L D                         RRLL     VC ER   AP  +  + E          D +G+A  CA          L GPEGGF   E+ +     F+RFVSLGP +LRAETAA+ A++ W A     +RR
Sbjct:    5 TGVRA-RLYVDQA-LDAGRSVDLSANQSHYLKHVLRLGPGAEVALFNGKDGEWRARIETIRRNAGS----------------LGVETQIRPQITE-----------------PDLWLLFAPIKRARLDMLVQKAVELGVSRLVPVLTERTEVKRLNADRHRSNL-----IEAAEQCERMTLPEI-VEPRPILDVLSDFPTG---------------------RRLL-----VCAERGHAAP--INQILE----------DDTGEADRCA---------ILCGPEGGFAETELDAFQKLSFIRFVSLGPRILRAETAAISAVTCWQAALGDWRRR 250          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A1H4DH21_9RHOB (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Rubrimonas cliftonensis TaxID=89524 RepID=A0A1H4DH21_9RHOB)

HSP 1 Score: 124 bits (312), Expect = 2.590e-28
Identity = 120/323 (37.15%), Postives = 152/323 (47.06%), Query Frame = 2
Query: 1133 APRVYLG-GANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVT-SGRSGGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTA 2095
            AP+V L   A L  G  V L   Q  YL +VMR+  G  V +F+G +GE+ AV T +GR GG                      LR   L R Q               P ++LIFAPI+K R   + EKA E+GA RL P +T  T     A+   +++L    AVEAAEQCE ++VP V A P PL +LL+  E                     A RRL+     VC E   DAPP ++AL    RE+  G                    A L+GPEGGF P E + ++  PFV  VSLGP VLRA+TAAV AL+ W A
Sbjct:    5 APKVRLFVDAPLGDGAAVALERAQAHYLFTVMRLGQGDAVALFNGRDGEWRAVATEAGRKGGA---------------------LRCAALLRPQAEG------------PDLDLIFAPIKKARTDFIAEKACEMGARRLIPCLTRFTN----AERVNVERLR-AHAVEAAEQCEILSVPQVLA-PAPLAALLDAWE---------------------AGRRLM-----VCDEA-RDAPPAMDALRAAGREAGSGPGPW----------------AVLIGPEGGFAPEERARLSEAPFVTRVSLGPRVLRADTAAVAALALWQA 245          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A3T0E7Y8_9PROT (Ribosomal RNA small subunit methyltransferase E n=1 Tax=Glycocaulis alkaliphilus TaxID=1434191 RepID=A0A3T0E7Y8_9PROT)

HSP 1 Score: 122 bits (307), Expect = 1.300e-27
Identity = 119/324 (36.73%), Postives = 152/324 (46.91%), Query Frame = 2
Query: 1136 PRVYLGGANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLL----EDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTA 2095
            PR+++  A L  G  + L  EQ  YLV+VMR  AG+ VRVF+G +GE+   V      G                  LQVE R+    R Q            TGVP + L FAP++K R   +VEKA E+GA+ + PV+T RTQ   V      D+L L  A EAAEQ ER+ +P + + PV L  LL    +   L      GD  GA   GG  G  R                  PL + L        +GE D SG                L+GPEGGFD AE + +   PFVR V+LGP +LRA+TAAV AL+ W A
Sbjct:    5 PRLFVD-APLSEGAELILPREQAHYLVNVMRREAGAPVRVFNGRDGEWQTKVAEASRKGAS----------------LQVETRL----REQ------------TGVPPLRLCFAPVKKARTDFIVEKATELGAACIQPVITRRTQSERVRT----DRL-LALATEAAEQTERLCLPEM-SEPVSLERLLACWPDGERLIFCDEAGDGEGA--WGGSQGRAR------------------PLADML--------QGETDPSGPW------------TILIGPEGGFDDAERTHLRSLPFVRAVTLGPRILRADTAAVAALTLWQA 249          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: UPI0010745A2F (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Terasakiella sp. SH-1 TaxID=2560057 RepID=UPI0010745A2F)

HSP 1 Score: 120 bits (302), Expect = 5.720e-27
Identity = 102/317 (32.18%), Postives = 153/317 (48.26%), Query Frame = 2
Query: 1139 RVYLGGANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSW 2089
            R+Y+   +L VG +  LS++Q  Y+ +VMR++ G  V VF+G +GE+L  ++S R                       ++L ++K+  +                P + L+FAPI+KQRL  ++EKA E+G S   PV+T RT    +A     D+L   T +EA+EQCER+ +P V    V L+ L++D   +                           TLFV  E    A P+LE L E+A +          + G CA          LVGPEGGFDP+E+  +A    V  +S+GP +LRA+TAA+ A+S W
Sbjct:    3 RLYID-TSLSVGLSQDLSSDQAHYVNNVMRLKVGDEVAVFNGQDGEWLGQISSARK------------------KNCTIQL-IEKIREQD-------------SCPDLMLVFAPIKKQRLDFIMEKATELGVSDFQPVITQRT----IASKIRSDRLCAQT-IEASEQCERLNIPVVHEA-VSLVQLVKDWPQER--------------------------TLFVLNEHGG-AKPILEGLQEFAGK----------EIGPCA---------ILVGPEGGFDPSELDLLAKLQNVVPLSIGPRILRADTAALAAISCW 234          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: A0A143DD91_9PROT (Ribosomal RNA small subunit methyltransferase E n=4 Tax=Haematospirillum TaxID=1804663 RepID=A0A143DD91_9PROT)

HSP 1 Score: 120 bits (300), Expect = 1.060e-26
Identity = 111/319 (34.80%), Postives = 144/319 (45.14%), Query Frame = 2
Query: 1157 ANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAF---WS 2104
            A L    +V     Q RYL SV+R R    V +F+G +G++LA +                          +VELR     R QP          DTG+P V L+FAP++K    M+V+KA E+GAS L PV+T+RT    V     +++L   TA+EAAEQCER TVP +         + E LE              LL G +         TL+V  E     P         ARE+                   +  AAFL GPEGGFDP E   +   PFVR VSLGP +LRAETAA+ +L+ W A    WS
Sbjct:   13 ARLAKDASVLADAGQARYLGSVLRARPADRVCLFNGQDGDWLADIVH--------------------LDRQRVELRALSCLRPQP----------DTGIPDVWLLFAPVKKDGTDMIVQKATELGASVLWPVLTSRTNSQRVN----VERLR-ATAIEAAEQCERSTVPDMR--------MPERLE-------------PLLAGWEHT------RTLYVADETGRGDP----VATVLAREA-------------------SGPAAFLTGPEGGFDPRETELLHQAPFVRPVSLGPRILRAETAAMASLTCWQAINGDWS 246          
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Match: UPI0004150087 (16S rRNA (uracil(1498)-N(3))-methyltransferase n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004150087)

HSP 1 Score: 120 bits (301), Expect = 1.280e-26
Identity = 118/333 (35.44%), Postives = 150/333 (45.05%), Query Frame = 2
Query: 1118 PTATRAPRVYLGGANLHVGQTVQLSTEQTRYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSXXXXXXXXXXXXLQVELRVDKLTRRQPGXXXXXXTGLDTGVPGVELIFAPIRKQRLKMLVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERMTVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPSTLFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAFLVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAF---WSA 2107
            P A    R+Y+ G  L  GQ V L  E+  YL  VMR   G  + VF+G +GE+ A +     G G+G  S                L VD   R Q            T  P + L+FAP+++ R+  + EKA E+GASR+ PV T RT    V     LD+L    AVEAAEQCER+TVP + A PVPL   L                        G P   +   LF C E    A P+ EA+  +A                         AAFLVGPEGGFD  E+ ++   PFV  V LGP +LRA+TAA  AL+ W A    W+A
Sbjct:   11 PDARPKIRLYVDGP-LATGQAVGLDHERAHYLRHVMRRDRGDAIAVFNGRDGEWRATI----DGFGKGWCS----------------LTVDGRLRAQ------------TAAPDLWLLFAPLKRGRIDTVAEKASELGASRIWPVFTRRTDPHRVN----LDRLR-ANAVEAAEQCERLTVPEL-AEPVPLDRALA-----------------------GWPADRV---LFFCAE-SGSAIPVAEAVRAHATRP----------------------AAFLVGPEGGFDTRELDAIRNLPFVVPVGLGPRILRADTAAFAALACWQALAGDWAA 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15243.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K9Y9_9PHAE2.190e-10859.5616S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
D7G8G1_ECTSI1.940e-8557.9316S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A835ZHN8_9STRA3.820e-3137.5416S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A3D6A1M1_9PROT1.750e-2937.89Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A2E4XSR1_9PROT6.310e-2934.13Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A1H4DH21_9RHOB2.590e-2837.15Ribosomal RNA small subunit methyltransferase E n=... [more]
A0A3T0E7Y8_9PROT1.300e-2736.73Ribosomal RNA small subunit methyltransferase E n=... [more]
UPI0010745A2F5.720e-2732.1816S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]
A0A143DD91_9PROT1.060e-2634.80Ribosomal RNA small subunit methyltransferase E n=... [more]
UPI00041500871.280e-2635.4416S rRNA (uracil(1498)-N(3))-methyltransferase n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:2185028..2187895 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score286.6
Seed ortholog evalue2.1e-74
Seed eggNOG ortholog2880.D7G8G1
EggNOG free text desc.RNA methyltransferase
EggNOG OGs2SA8N@2759,COG1385@1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal anchor
Exons3
Model size2359
Cds size1377
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15243.1prot_P-fluviatile_contig9.15243.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 2185256..2187113 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817335.428507-UTR-P-fluviatile_contig9:2185027..21852551622817335.428507-UTR-P-fluviatile_contig9:2185027..2185255Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2185028..2185255 -
1693572120.4846966-UTR-P-fluviatile_contig9:2185027..21852551693572120.4846966-UTR-P-fluviatile_contig9:2185027..2185255Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2185028..2185255 -
1622817335.463251-UTR-P-fluviatile_contig9:2187113..21874641622817335.463251-UTR-P-fluviatile_contig9:2187113..2187464Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2187114..2187464 -
1693572120.5199556-UTR-P-fluviatile_contig9:2187113..21874641693572120.5199556-UTR-P-fluviatile_contig9:2187113..2187464Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2187114..2187464 -
1622817335.4773314-UTR-P-fluviatile_contig9:2187492..21878951622817335.4773314-UTR-P-fluviatile_contig9:2187492..2187895Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2187493..2187895 -
1693572120.5302289-UTR-P-fluviatile_contig9:2187492..21878951693572120.5302289-UTR-P-fluviatile_contig9:2187492..2187895Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 2187493..2187895 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817335.438904-CDS-P-fluviatile_contig9:2185255..21863711622817335.438904-CDS-P-fluviatile_contig9:2185255..2186371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2185256..2186371 -
1693572120.4982343-CDS-P-fluviatile_contig9:2185255..21863711693572120.4982343-CDS-P-fluviatile_contig9:2185255..2186371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2185256..2186371 -
1622817335.448982-CDS-P-fluviatile_contig9:2186852..21871131622817335.448982-CDS-P-fluviatile_contig9:2186852..2187113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2186853..2187113 -
1693572120.5094624-CDS-P-fluviatile_contig9:2186852..21871131693572120.5094624-CDS-P-fluviatile_contig9:2186852..2187113Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 2186853..2187113 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15243.1

>prot_P-fluviatile_contig9.15243.1 ID=prot_P-fluviatile_contig9.15243.1|Name=mRNA_P-fluviatile_contig9.15243.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=459bp
MRHRGSQRRHGDEREPVTCKYFTMMKGMRFRQLLLLVAALSVLSDAYISA
GAVGWAQLRLPTRFRSASKRRAAVSRAVFLGRRCLQNTGGAAQEGCNAGN
SGEEGIPTACGSSAPIFPPPPPTATRAPRVYLGGANLHVGQTVQLSTEQT
RYLVSVMRVRAGSLVRVFDGVNGEFLAVVTSGRSGGGRGQTSKSRRSGGG
GGGGLQVELRVDKLTRRQPGSGGGGGTGLDTGVPGVELIFAPIRKQRLKM
LVEKAVEIGASRLTPVMTARTQKGAVADSKALDKLGLVTAVEAAEQCERM
TVPCVEATPVPLLSLLEDLELQSSARRGDSGGAKLLGGQDGAPRRLLPST
LFVCKERDADAPPLLEALAEYARESEEGENDISGDAGGCAAAPENAKAAF
LVGPEGGFDPAEISSMAMYPFVRFVSLGPSVLRAETAAVYALSSWTAFWS
ARKRRSKS*
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mRNA from alignment at P-fluviatile_contig9:2185028..2187895-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15243.1 ID=mRNA_P-fluviatile_contig9.15243.1|Name=mRNA_P-fluviatile_contig9.15243.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2868bp|location=Sequence derived from alignment at P-fluviatile_contig9:2185028..2187895- (Porterinema fluviatile SAG_2381)
GTTGTTAACCTGCTCTCTCGCAGTCGCTCTCTCGAATGGAACGGAATGGA ACGGAATGGAACATCCATGCCAAGCCACTAATATCTAATGCAGTGCTATT GCTCTGTGCAATATCTTGTGCTGGTGTAGCGTCATTACAAAGAAGTGTGT CGTACAGCAACGACGGAGAGAAGCAGCTGCCTCCCCAGCCTTGAGGGCGA GTGTGCATTTTCCGGCCTGCTATTTGTGCATGTGAACTGGCGGCCGGTGC GCTGATCACGCCCTCGTCCAGGCAAGCAATGACGGGAACCAATCGGTGAG GAGACAAGCTGCTTCAAGTGAAAGTCTCCAAATCTACACACACGCATACC TGCTCTCGCTCTCCTCTTTCGTTCTCTGTCTGTCGCTCTCCCCCCCCGCA CTCTCCCCTCTCCGTGGATGTTGATGTGTTTGGACACGTCACCCGACGAT TGAGATTTTTTACCTTCCCGGAGAGAATTTTTTTACACTGTAAGTCGACA CTCGTGCCCCTATGATGTGTCCTCTCCCTGCAGCAACGGGGCGCTCTCTC TTCCTTGCGTTTTATCTCCCTCCCCGTGCTTGAGCGAATCTCTTTACTAT GTGTGTAGCTGTGTCCCATACCGCCGTGCTTGCGACGTTTGAGATGACAC GTACGACCCTGCCGGTTCAGCGACGTCACGTATTCCTTTTCACAGGAACA CACAAGAGGTGAAAGCGCGCTCCGCTCACACGAAGATAAGCCCTCTCCAC CTGCCAGAGAGGGGGTGTGAGCTAGGCGATAAATGAGGCACAGAGGAAGT CAACGGAGGCATGGGGACGAGAGAGAGCCGGTTACCTGCAAATACTTCAC AATGATGAAGGGGATGCGATTCCGGCAGCTCCTGCTGCTCGTGGCTGCGC TCTCTGTCCTGAGCGATGCGTACATTTCCGCAGGGGCAGTGGGATGGGCT CAGCTTCGCTTGCCGACAAGATTTCGCAGCGCATCGAAGCGCCGTGCCGC AGTATCTCGTGCGGTCTTTCTCGGGAGGAGATGCCTTCAGAATGTGAGGA TGCCATCCGTAGTGCATGTATGCTTTTGGTGGGGATTACGCTACAACGGT GGCACGCAAGATCACGGAAGCCCTGCCCCGGCCTTATCATCCCGCGTTGT GTTTCGAGATTTCCAAAGTGAACAGGCACACCCATTGGGCATCACCACGG TGCTGGCATGCTGTCCTCTGCACCCGTCTGCGTATTTTGTGGCGGAAAGA ATTGTTTGCAAAACACCTCTCAAGGCTTCGTGAGGAATCTCACTTTGTGG CTCCCCTGTGAGTCTCACGGATCTTTTACTTTCATTACGATGGTTCGAGA GTGTGTACAATTTAAACCGCTCCCAAGAAACAAGCCCCACACTACAGAGT TCTGCGCGCCGAGCTTTTTTTTTCCGCTGATGGACTTGTTTCGAGAGCTC CGCCCACTTTCGTGCGCTGCGACTCTGTTGTCCGCTCCTTTCTACCTTGC TGTCAAATATCCTCGTCGTGGAAGACGGGAGGCGCAGCACAGGAGGGTTG CAACGCCGGGAATTCAGGAGAAGAAGGAATTCCTACCGCCTGTGGCAGTT CTGCGCCGATTTTTCCCCCACCGCCACCGACGGCGACGCGCGCCCCCCGC GTGTACCTCGGCGGCGCGAACTTGCATGTGGGACAAACCGTTCAGCTGTC GACCGAGCAGACGCGGTACCTCGTGAGCGTCATGCGCGTGCGGGCCGGTA GTCTCGTACGCGTTTTCGACGGCGTGAATGGCGAATTCTTGGCCGTGGTT ACTTCCGGCAGGAGCGGCGGCGGTCGAGGCCAAACGAGCAAGTCAAGGCG ATCGGGCGGCGGTGGCGGTGGCGGCCTGCAGGTAGAGTTGCGGGTCGACA AGCTCACACGGCGGCAGCCAGGCAGCGGAGGGGGTGGTGGCACGGGGCTT GACACGGGCGTACCTGGTGTCGAGCTCATCTTCGCTCCCATCCGAAAGCA GCGCCTCAAGATGCTCGTGGAAAAAGCGGTCGAAATAGGAGCTTCGCGGC TGACGCCCGTGATGACTGCTCGCACGCAGAAGGGCGCGGTCGCGGACTCG AAAGCCCTTGATAAGCTCGGACTTGTCACGGCCGTGGAGGCTGCCGAGCA ATGCGAGCGCATGACGGTACCATGTGTCGAGGCAACGCCTGTACCGCTCT TGTCCCTTCTCGAGGACCTGGAGCTGCAAAGCTCTGCTAGGAGAGGAGAT AGCGGCGGTGCCAAGCTTCTAGGGGGGCAGGACGGCGCGCCGAGACGCTT GTTGCCGAGCACTCTTTTCGTGTGCAAGGAAAGAGACGCAGATGCGCCGC CGCTTTTGGAGGCTCTCGCAGAGTATGCGCGGGAAAGCGAGGAGGGCGAA AACGACATTTCTGGCGATGCTGGCGGTTGTGCCGCCGCCCCGGAGAACGC AAAGGCTGCTTTCCTTGTGGGGCCGGAAGGCGGGTTCGATCCCGCTGAGA TAAGCTCGATGGCAATGTACCCGTTTGTTCGATTTGTGTCCCTTGGACCT TCGGTGCTCCGTGCTGAAACGGCGGCCGTGTACGCCCTCAGTTCGTGGAC CGCTTTTTGGTCTGCGCGCAAACGGCGGAGCAAGAGTTGACCCGTTCATT TTTTACACGCACCTTCTACCTGTACTGCGGGCGTTTCGTCGAACGCACGC GGAGTGACTGCCGGCCAGGGGTTGTTGGCCTTCTCCATTGCTGACTTGGT TGGTGTGTTTCCGTTCATCTTGTCCCAAGAACGGCGCAAAGAATGGTTGT CGTTTGTAGCGCTCCTGTGCAAGGTTTTAGGGAATGATGCGTGCAACCGT TTTTTATCTGACTTTTAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:2185028..2187895-

>mRNA_P-fluviatile_contig9.15243.1 ID=mRNA_P-fluviatile_contig9.15243.1|Name=mRNA_P-fluviatile_contig9.15243.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2754bp|location=Sequence derived from alignment at P-fluviatile_contig9:2185028..2187895- (Porterinema fluviatile SAG_2381)
ATGAGGCACAGAGGAAGTCAACGGAGGCATGGGGACGAGAGAGAGCCGGT
TACCTGCAAATACTTCACAATGATGAAGGGGATGCGATTCCGGCAGCTCC
TGCTGCTCGTGGCTGCGCTCTCTGTCCTGAGCGATGCGTACATTTCCGCA
GGGGCAGTGGGATGGGCTCAGCTTCGCTTGCCGACAAGATTTCGCAGCGC
ATCGAAGCGCCGTGCCGCAGTATCTCGTGCGGTCTTTCTCGGGAGGAGAT
GCCTTCAGAATATGAGGCACAGAGGAAGTCAACGGAGGCATGGGGACGAG
AGAGAGCCGGTTACCTGCAAATACTTCACAATGATGAAGGGGATGCGATT
CCGGCAGCTCCTGCTGCTCGTGGCTGCGCTCTCTGTCCTGAGCGATGCGT
ACATTTCCGCAGGGGCAGTGGGATGGGCTCAGCTTCGCTTGCCGACAAGA
TTTCGCAGCGCATCGAAGCGCCGTGCCGCAGTATCTCGTGCGGTCTTTCT
CGGGAGGAGATGCCTTCAGAATACGGGAGGCGCAGCACAGGAGGGTTGCA
ACGCCGGGAATTCAGGAGAAGAAGGAATTCCTACCGCCTGTGGCAGTTCT
GCGCCGATTTTTCCCCCACCGCCACCGACGGCGACGCGCGCCCCCCGCGT
GTACCTCGGCGGCGCGAACTTGCATGTGGGACAAACCGTTCAGCTGTCGA
CCGAGCAGACGCGGTACCTCGTGAGCGTCATGCGCGTGCGGGCCGGTAGT
CTCGTACGCGTTTTCGACGGCGTGAATGGCGAATTCTTGGCCGTGGTTAC
TTCCGGCAGGAGCGGCGGCGGTCGAGGCCAAACGAGCAAGTCAAGGCGAT
CGGGCGGCGGTGGCGGTGGCGGCCTGCAGGTAGAGTTGCGGGTCGACAAG
CTCACACGGCGGCAGCCAGGCAGCGGAGGGGGTGGTGGCACGGGGCTTGA
CACGGGCGTACCTGGTGTCGAGCTCATCTTCGCTCCCATCCGAAAGCAGC
GCCTCAAGATGCTCGTGGAAAAAGCGGTCGAAATAGGAGCTTCGCGGCTG
ACGCCCGTGATGACTGCTCGCACGCAGAAGGGCGCGGTCGCGGACTCGAA
AGCCCTTGATAAGCTCGGACTTGTCACGGCCGTGGAGGCTGCCGAGCAAT
GCGAGCGCATGACGGTACCATGTGTCGAGGCAACGCCTGTACCGCTCTTG
TCCCTTCTCGAGGACCTGGAGCTGCAAAGCTCTGCTAGGAGAGGAGATAG
CGGCGGTGCCAAGCTTCTAGGGGGGCAGGACGGCGCGCCGAGACGCTTGT
TGCCGAGCACTCTTTTCGTGTGCAAGGAAAGAGACGCAGATGCGCCGCCG
CTTTTGGAGGCTCTCGCAGAGTATGCGCGGGAAAGCGAGGAGGGCGAAAA
CGACATTTCTGGCGATGCTGGCGGTTGTGCCGCCGCCCCGGAGAACGCAA
AGGCTGCTTTCCTTGTGGGGCCGGAAGGCGGGTTCGATCCCGCTGAGATA
AGCTCGATGGCAATGTACCCGTTTGTTCGATTTGTGTCCCTTGGACCTTC
GGTGCTCCGTGCTGAAACGGCGGCCGTGTACGCCCTCAGTTCGTGGACCG
CTTTTTGGTCTGCGCGCAAACGGCGGAGCAAGAGTTGAACGGGAGGCGCA
GCACAGGAGGGTTGCAACGCCGGGAATTCAGGAGAAGAAGGAATTCCTAC
CGCCTGTGGCAGTTCTGCGCCGATTTTTCCCCCACCGCCACCGACGGCGA
CGCGCGCCCCCCGCGTGTACCTCGGCGGCGCGAACTTGCATGTGGGACAA
ACCGTTCAGCTGTCGACCGAGCAGACGCGGTACCTCGTGAGCGTCATGCG
CGTGCGGGCCGGTAGTCTCGTACGCGTTTTCGACGGCGTGAATGGCGAAT
TCTTGGCCGTGGTTACTTCCGGCAGGAGCGGCGGCGGTCGAGGCCAAACG
AGCAAGTCAAGGCGATCGGGCGGCGGTGGCGGTGGCGGCCTGCAGGTAGA
GTTGCGGGTCGACAAGCTCACACGGCGGCAGCCAGGCAGCGGAGGGGGTG
GTGGCACGGGGCTTGACACGGGCGTACCTGGTGTCGAGCTCATCTTCGCT
CCCATCCGAAAGCAGCGCCTCAAGATGCTCGTGGAAAAAGCGGTCGAAAT
AGGAGCTTCGCGGCTGACGCCCGTGATGACTGCTCGCACGCAGAAGGGCG
CGGTCGCGGACTCGAAAGCCCTTGATAAGCTCGGACTTGTCACGGCCGTG
GAGGCTGCCGAGCAATGCGAGCGCATGACGGTACCATGTGTCGAGGCAAC
GCCTGTACCGCTCTTGTCCCTTCTCGAGGACCTGGAGCTGCAAAGCTCTG
CTAGGAGAGGAGATAGCGGCGGTGCCAAGCTTCTAGGGGGGCAGGACGGC
GCGCCGAGACGCTTGTTGCCGAGCACTCTTTTCGTGTGCAAGGAAAGAGA
CGCAGATGCGCCGCCGCTTTTGGAGGCTCTCGCAGAGTATGCGCGGGAAA
GCGAGGAGGGCGAAAACGACATTTCTGGCGATGCTGGCGGTTGTGCCGCC
GCCCCGGAGAACGCAAAGGCTGCTTTCCTTGTGGGGCCGGAAGGCGGGTT
CGATCCCGCTGAGATAAGCTCGATGGCAATGTACCCGTTTGTTCGATTTG
TGTCCCTTGGACCTTCGGTGCTCCGTGCTGAAACGGCGGCCGTGTACGCC
CTCAGTTCGTGGACCGCTTTTTGGTCTGCGCGCAAACGGCGGAGCAAGAG
TTGA
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