mRNA_P-fluviatile_contig9.15165.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: D7G586_ECTSI (Dynein light chain roadblock n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G586_ECTSI) HSP 1 Score: 191 bits (484), Expect = 1.960e-61 Identity = 97/98 (98.98%), Postives = 98/98 (100.00%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK 294
MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTY+ALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK
Sbjct: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYSALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHSK 98
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A836CL08_9STRA (Dynein light chain roadblock n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL08_9STRA) HSP 1 Score: 170 bits (431), Expect = 2.390e-53 Identity = 83/97 (85.57%), Postives = 93/97 (95.88%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 291
MSSEVEETLKRIQSHRGVKGVLI+N +GIPIRSN++QEDTDTYAALISQL+FKANGI+RTLDE DSLTFLRLRS KHEIMVAPDKD+ LIV+QNP++
Sbjct: 1 MSSEVEETLKRIQSHRGVKGVLIINQEGIPIRSNMNQEDTDTYAALISQLNFKANGIIRTLDETDSLTFLRLRSQKHEIMVAPDKDFTLIVVQNPNA 97
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A482SBS1_9ARCH (Roadblock/LC7 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SBS1_9ARCH) HSP 1 Score: 158 bits (400), Expect = 1.280e-48 Identity = 76/97 (78.35%), Postives = 88/97 (90.72%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 291
MSSEVEETLKRIQSH+GVKGVLI+N +GIPIRSNLS EDT+ YAAL+SQL+FKA+G+VR LDE D L FLR+RS KHEIMVAPDKDY+L+VIQNP+
Sbjct: 1 MSSEVEETLKRIQSHKGVKGVLIMNAEGIPIRSNLSPEDTENYAALVSQLAFKASGVVRCLDETDELAFLRIRSKKHEIMVAPDKDYVLVVIQNPNE 97
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A7S2FUR4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FUR4_9STRA) HSP 1 Score: 151 bits (381), Expect = 3.160e-45 Identity = 72/96 (75.00%), Postives = 86/96 (89.58%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPH 288
MS+EVEETLKRIQSHRGVKGVLI N++G+PIRSNL ED TY+AL+SQL+ KAN +VR LDEAD LTFLR+RS KHEIM+APDK+++LIVIQNP+
Sbjct: 38 MSTEVEETLKRIQSHRGVKGVLICNSEGVPIRSNLPAEDEQTYSALVSQLAMKANNVVRNLDEADELTFLRIRSKKHEIMIAPDKEFLLIVIQNPN 133
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A7S1U8Y1_9STRA (Dynein light chain roadblock n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U8Y1_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.180e-44 Identity = 72/93 (77.42%), Postives = 85/93 (91.40%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQ 279
MS+ VEETLKRIQSHRGVKGVLI+N+DG+PIRS L+QE TD+YAAL+SQL+FKA+ +VRTLDE D LTFLR+RS K EIMVAPD+DY+LIVIQ
Sbjct: 1 MSAAVEETLKRIQSHRGVKGVLIVNSDGVPIRSTLNQESTDSYAALLSQLAFKASSVVRTLDETDGLTFLRIRSNKEEIMVAPDRDYLLIVIQ 93
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A7S2STB6_9STRA (Dynein light chain roadblock n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STB6_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.480e-42 Identity = 67/96 (69.79%), Postives = 83/96 (86.46%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPH 288
MS EVEET+KRIQSHRGVKGV+I N++G+PIRSNL ED Y+AL+SQL+ KA+ +VRTLDE D L FLR+RS KHE+MVAPDK+++LIVIQNP+
Sbjct: 10 MSMEVEETMKRIQSHRGVKGVVICNSEGVPIRSNLEPEDEQNYSALVSQLAIKASSVVRTLDETDDLAFLRIRSKKHEVMVAPDKEFLLIVIQNPN 105
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: F0Y4U8_AURAN (Dynein light chain roadblock n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4U8_AURAN) HSP 1 Score: 142 bits (358), Expect = 3.140e-42 Identity = 69/97 (71.13%), Postives = 83/97 (85.57%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 291
MSSEVEETL+RIQSHRGVKGVLI++ G+PIRSNL E+T+TYAAL+SQL+ KA+ +VRTLDE D LTF R+RS KHEIM+APD +Y+LIVIQ S
Sbjct: 1 MSSEVEETLRRIQSHRGVKGVLIVSAQGVPIRSNLENEETNTYAALLSQLAMKASSVVRTLDETDELTFFRIRSKKHEIMIAPDAEYLLIVIQETAS 97
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A8J2WXW4_9STRA (Dynein light chain roadblock n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXW4_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.010e-40 Identity = 66/93 (70.97%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQ 279
MSSEVEETLKRIQSHRGVKGVLI++ DG+PIRSNL ++T TYAAL+SQL+ KA +VR LD+ D L F R+RS KHEIMVAPD +Y+LIV+Q
Sbjct: 1 MSSEVEETLKRIQSHRGVKGVLIVSADGVPIRSNLDDDETQTYAALLSQLATKARNVVRVLDDQDELAFFRIRSNKHEIMVAPDPEYLLIVVQ 93
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: A0A1Y2ATV3_9FUNG (Dynein light chain roadblock n=3 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2ATV3_9FUNG) HSP 1 Score: 131 bits (330), Expect = 6.550e-38 Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 1
Query: 7 SEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 291
SEVEET+KR+QSH+GV+G++I+NNDGIPIRS L T Y+ALI+QL+ KA +VR LD + LTFLR+RS KHEIMVAPDK+YILIVIQNP
Sbjct: 2 SEVEETIKRLQSHKGVEGIVIVNNDGIPIRSTLDNNLTVQYSALITQLASKARSVVRDLDPQNDLTFLRIRSKKHEIMVAPDKEYILIVIQNPQE 96
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Match: C5KNE1_PERM5 (Roadblock, putative n=1 Tax=Perkinsus marinus (strain ATCC 50983 / TXsc) TaxID=423536 RepID=C5KNE1_PERM5) HSP 1 Score: 131 bits (330), Expect = 1.130e-37 Identity = 63/97 (64.95%), Postives = 82/97 (84.54%), Query Frame = 1
Query: 1 MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLSFKANGIVRTLDEADSLTFLRLRSTKHEIMVAPDKDYILIVIQNPHS 291
+ SEVEETL RI++H+GV G++ILN++G+PIRS L Q+ T Y+ALISQL++KA ++R LD + LTFLRLRS KHEIMVAPDKDYILIVIQ+P++
Sbjct: 14 LMSEVEETLNRIKTHKGVSGIVILNHEGVPIRSTLEQKYTLQYSALISQLTYKARSVIRDLDPHNDLTFLRLRSRKHEIMVAPDKDYILIVIQDPNA 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15165.1 >prot_P-fluviatile_contig9.15165.1 ID=prot_P-fluviatile_contig9.15165.1|Name=mRNA_P-fluviatile_contig9.15165.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=99bp MSSEVEETLKRIQSHRGVKGVLILNNDGIPIRSNLSQEDTDTYAALISQLback to top mRNA from alignment at P-fluviatile_contig9:1544355..1544651- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15165.1 ID=mRNA_P-fluviatile_contig9.15165.1|Name=mRNA_P-fluviatile_contig9.15165.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=297bp|location=Sequence derived from alignment at P-fluviatile_contig9:1544355..1544651- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:1544355..1544651- >mRNA_P-fluviatile_contig9.15165.1 ID=mRNA_P-fluviatile_contig9.15165.1|Name=mRNA_P-fluviatile_contig9.15165.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=594bp|location=Sequence derived from alignment at P-fluviatile_contig9:1544355..1544651- (Porterinema fluviatile SAG_2381)back to top |