mRNA_P-fluviatile_contig9.15154.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15154.1
Unique NamemRNA_P-fluviatile_contig9.15154.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: D7G596_ECTSI (Putative DP transcription factor n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G596_ECTSI)

HSP 1 Score: 693 bits (1788), Expect = 1.570e-241
Identity = 419/529 (79.21%), Postives = 450/529 (85.07%), Query Frame = 2 
Query:  128 MESLIFPSYATSPTPFGLSSAGLWDEIEDNGKNSSSRRKHDDTLNDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKEGGQGSVAQMLRPFSVAGDATSPVAMTASAIFSPKPRGVAPALDSPLLLKRSLGSPAPXXXXXXXXXXXXXXXAHRGD--GGALSHLTESPAAIRGTDLRQVASAESDTPPKSKPYTKRARKSLPEAAXXXXXXXXXXXXXXXXXXXXXXAGRTRRACTNYAADASGETEPRAKRTKKVDTKPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAG------NGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEVYTRDDADXXXXXXXXXXXXXS-CSEYSPT 1687
            MESL+FP  ATSPTP    S GLWDEIEDNGK SS +RKHDDTL+DELLTMLKDAGLENMALEVGTVQGGQIAALQDGK+GG GS A+MLRPF+ AGDATSPVAMTASAIFSP PRG AP LDSPLLLKRSLGSPA XXXXXXXXXXXXXXX HR    GGALSHLTESPAAI+GTDLRQ ASAESD+PPKSK  +K++R++LP A  XXXXXXXXXXXXXXXX     AGRTRRACT+Y ADA  +T  + KRTKK + KPNKGLRHFSVKVCRKVEEK TTTYNEVADELVQELAAEG+ G+GKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPEN++RSGL ALQ+EK DRERSLD KK QLADLLVQQISFRNLARRNRS A              NGAECA + D +E+AASKIFVPFIVVSSS+DTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMH+CRKQDLPVLLARELIP+VP EVY+RDDA+             S CS+YSPT
Sbjct:    1 MESLMFPGDATSPTP----SFGLWDEIEDNGKFSSLKRKHDDTLSDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKDGGLGSAAKMLRPFAAAGDATSPVAMTASAIFSPNPRGTAPPLDSPLLLKRSLGSPAXXXXXXXXXXXXXXXXXHRVGVGGGALSHLTESPAAIKGTDLRQAASAESDSPPKSK--SKKSRRTLPPATAXXXXXXXXXXXXXXXXP----AGRTRRACTHYGADAPSDTALQTKRTKKPEAKPNKGLRHFSVKVCRKVEEKGTTTYNEVADELVQELAAEGKLGTGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENSSRSGLRALQQEKQDRERSLDAKKSQLADLLVQQISFRNLARRNRSRAXXXXXXXXXXXXXXNGAECAEEQDAEEVAASKIFVPFIVVSSSHDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHKCRKQDLPVLLARELIPRVPPEVYSRDDAEGSPSSSSTPSSPTSSCSDYSPT 519
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A2D4C957_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C957_PYTIN)

HSP 1 Score: 224 bits (571), Expect = 5.830e-62
Identity = 126/252 (50.00%), Postives = 171/252 (67.86%), Query Frame = 2 
Query:  869 PRAKRTKKVDTKPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEVYTRDDAD 1624
            P AK+ K++  K NKGLRHFS++VC+KVEEK  TTYNEVADELV+E           +  YD+KNIRRRVYDALNVLMA+DIISK+RKEI+W+GLP N        L  E+ +R +S++ KK  L DLLVQQ++ +NL +RN               E   D   DE    +IF+PFIVV++S DTVIQCEM+E+R+D+FFNFS+ F+I DD EIL+RL +H+C +++L  ++  +L+  VP E  ++ + D
Sbjct:  179 PSAKKRKQL--KINKGLRHFSLRVCQKVEEKNVTTYNEVADELVREFVTM----RPNDTAYDEKNIRRRVYDALNVLMALDIISKERKEIRWRGLPTNLQHDAE-MLIAERNERVKSVEQKKQHLQDLLVQQVAMKNLLKRNAKRRK----------ESTLDALRDE---GRIFLPFIVVNTSKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEILRRLDLHKCPREELRHIVPEKLLSHVPTECESKSEED 410
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A8K1CI48_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CI48_PYTOL)

HSP 1 Score: 223 bits (568), Expect = 6.850e-62
Identity = 124/239 (51.88%), Postives = 163/239 (68.20%), Query Frame = 2 
Query:  902 KPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEVYTRDD 1618
            K NKGLRHFS+KVC KVEEK  TTYNEVADELV+E        SG    YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +S++ K+  L DLLVQQ++ +NL +RN            NG +  RD         +IF+PFIVV+++ DTVIQCEM+E+R+D+FFNFS+ F+I DD EIL+RL +H+C   +L  ++  +L+  +PAE  ++ D
Sbjct:  158 KINKGLRHFSMKVCEKVEEKNVTTYNEVADELVREFVTLRPNDSG----YDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPTNLQHDAE-MLIAERNERMKSVEQKRQHLQDLLVQQVAMKNLLKRNTKRRKE------NGTDTLRDE-------GRIFLPFIVVNTNKDTVIQCEMSEDRQDIFFNFSNPFEINDDTEILRRLDLHKCPYGELKQIVPDKLMSYLPAECESKSD 378
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: K3WUL3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUL3_GLOUD)

HSP 1 Score: 219 bits (557), Expect = 6.450e-60
Identity = 124/244 (50.82%), Postives = 164/244 (67.21%), Query Frame = 2 
Query:  902 KPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATAR-----AGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEVYTRDD 1618
            K NKGLRHFS+KVC+KVEEK  T+YNEVADELV+E           +  YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +SL+ KK  L DLLVQQ++ +NL +RN +   A      A  +G+G E             +IF+PFIVV+++ DTVIQCEM+E+R+D+FFNFS  F+I DD EIL+RL +H+C   +L  L+  +L+  +PAE   + +
Sbjct:  188 KINKGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTM----RPNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHD-TEMLIAERNERRKSLEQKKQHLQDLLVQQVAMKNLLKRNAARRKAETELSVASESGHGDE------------GRIFLPFIVVNTAKDTVIQCEMSEDRQDIFFNFSAPFEINDDTEILRRLNLHQCAFSELKQLVPEKLLSCLPAECEAKSE 414
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A5D6Y9W8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y9W8_9STRA)

HSP 1 Score: 219 bits (559), Expect = 6.930e-60
Identity = 132/277 (47.65%), Postives = 176/277 (63.54%), Query Frame = 2 
Query:  809 AGRTRRACTNYAADASGETEPR----AKRTKKVDTKPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAEC---ARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEVYTRDD 1618
            AG ++R  +  + D  G + P     A   K+   K NKGLRHFS+KVC+KVEEK TTTYNEVADELV+E           +  YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +SL+ KK  L DLLVQQ++ +NL +R              G+E    A +  +DE    +I +PFIVV++  DTVIQCEM+E+R+D+FFNFS  F+I DD EIL+RL +H+C   +L  L+  +L+  +PAE   + +
Sbjct:  174 AGVSKRQLSETSQDGGGASSPTFGSPASGKKRKYLKLNKGLRHFSMKVCQKVEEKHTTTYNEVADELVREFVTL----RPNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIQWKGLPSNLQHD-TEMLIAERNERMKSLEQKKQHLQDLLVQQVAMKNLLKRXXXXXXXXXXXXXXGSEAPAAASEAASDE---GRISLPFIVVNTGKDTVIQCEMSEDRQDIFFNFSAPFEINDDTEILRRLELHKCAYAELKQLVPEKLLAHLPAECEAKSE 442
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A485KV23_9STRA (Aste57867_12256 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KV23_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.210e-59
Identity = 124/261 (47.51%), Postives = 170/261 (65.13%), Query Frame = 2 
Query:  842 AADASGETEPRAKRTKKVDT----KPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEVYTR 1612
            A+  +G + P+ K+ +  +T    K +KGLRHFS+KVC+KVEEK  T+YNEVADELV E           E  YD+KNIRRRVYDALNVLMA+DIISK++KEI+W+GLP NA +  L  LQ E+  R +S++ KK QL +LL+QQI+ +NL +RN+                    +    A+S+I +PFI+V++  DTVIQCEM+E+R D+FFNFS  F+I DD+EILKR+ +HR         +  +LI  +PAE  T+
Sbjct:  165 ASFLAGASTPKKKKARSANTPVTEKGSKGLRHFSMKVCQKVEEKHVTSYNEVADELVHEFVTM----RPSESVYDEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLPSNA-KQDLELLQMERAQRAQSIEQKKQQLQELLLQQIALKNLIKRNKE-------------------EEKPPASSRISLPFILVNTPKDTVIQCEMSEDRHDIFFNFSGPFEINDDSEILKRMELHRIAPDQAASYVPEKLIRYLPAEYQTK 401
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A8J6CHE7_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CHE7_DIALT)

HSP 1 Score: 218 bits (555), Expect = 1.440e-59
Identity = 126/248 (50.81%), Postives = 162/248 (65.32%), Query Frame = 2 
Query:  857 GETEPRAKRTKKVDT--KPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVP 1594
            GE   + KR ++  T  K NKGLRHFS+KVC KVEEK  TTYNEVADELV E        S  +  YD+KNIRRRVYDALNVLMA+DII+K++K I W+GLP NAA+     LQ +  +R   ++ K+ QL +LL QQISF++L  RNR+   A                  EL  +++ +PFI+V++S  TVI CEMAE++ D+FFNFS  F+I DDNEILKR+G+H C+  DLP L+   LIP  P
Sbjct:   86 GEAGSKKKRLQRAHTGDKNNKGLRHFSMKVCNKVEEKSRTTYNEVADELVAEFVPTDGISS-MDQAYDEKNIRRRVYDALNVLMAMDIIAKEKKNITWRGLPTNAAQEA-DRLQVDVEERRERIEVKRLQLQELLTQQISFKHLVSRNRAQPNA----------------VPEL--NRVHLPFIIVNTSKQTVIDCEMAEDKHDIFFNFSMPFEIHDDNEILKRMGLHNCQLADLPHLVPPALIPFTP 313
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: W4FM68_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FM68_9STRA)

HSP 1 Score: 218 bits (554), Expect = 1.660e-59
Identity = 121/255 (47.45%), Postives = 167/255 (65.49%), Query Frame = 2 
Query:  839 YAADASGETEPRAKRTKKVDTKPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAA-SKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAE 1600
            + A    + +PR+  T  V  K +KGLRHFS+KVC+KVEEK  TTYNEVADELV E          +  +YD+KNIRRRVYDALNVLMA+DIISK++KEI+W+GLP NA +  L  LQ E   R +S++ KK QL +LL+QQI+ +NL +RN+                      D+ +A  +I +PFI+V++S DT+IQCEM+E+R+D+FFNFS  F+I DD+EILKR+ +H   + D    +  +LI  +P +
Sbjct:  182 HGASTPKKKKPRSTSTTPVSDKGSKGLRHFSMKVCQKVEEKHVTTYNEVADELVHEFVT---MRPAESVNYDEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLPSNA-KQDLELLQMENAQRAKSVEQKKQQLQELLLQQIALKNLIQRNKQ--------------------VDKPSALCRISLPFILVNTSKDTIIQCEMSEDRQDIFFNFSGPFEINDDSEILKRMNLHHVAEADAATHIPEKLIRYLPPD 412
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A3F2S1S5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1S5_9STRA)

HSP 1 Score: 210 bits (534), Expect = 7.540e-59
Identity = 117/236 (49.58%), Postives = 159/236 (67.37%), Query Frame = 2 
Query:  902 KPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAA---SKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAE 1600
            K NKGLRHFS+KVC+KVEEK  T+YNEVADELV+E           +  YD+KNIRRRVYDALNVLMA+DIISK+RKEI+WKGLP N        L  E+ +R +S++ KK  L DLLVQQ++ +NL +RN       +           ++    +AA    ++F+PFI V++S DTVIQCEM+E+R+D+FFNFS  F+I DD +IL+RL +H+ R  +L  ++  +L+  +PAE
Sbjct:   16 KINKGLRHFSMKVCQKVEEKHVTSYNEVADELVREFVTM----RPNDAVYDEKNIRRRVYDALNVLMAMDIISKERKEIRWKGLPSNLQHD-TEMLLAERNERMKSVEQKKQHLQDLLVQQVAMKNLLKRNAERKRLES-----------ENPVSAIAARDEGRVFLPFIAVNTSKDTVIQCEMSEDRQDIFFNFSAPFEIHDDADILQRLNLHKARFAELKQMVPDKLLSYLPAE 235
[Close]
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Match: A0A1V9ZDW0_9STRA (Transcription factor Dp-1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZDW0_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.530e-58
Identity = 122/244 (50.00%), Postives = 159/244 (65.16%), Query Frame = 2 
Query:  869 PRAKRTKKVDTKPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGLPENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSNATARAGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAENREDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAE 1600
            PR   T     K +KGLRHFS+KVC+KVEEK  T+YNEVADELV E        S     YD+KNIRRRVYDALNVLMA+DIISK++KEI+W+GLP NA +  L  L  EK  R +S++ KK QL +LL+QQI+ +NL RRN + A                      A S I +PFI+V++  DTVIQCEM+E+R+D+FFNFS  F+I DD+EILKR+ +H+    D+  L+  +L+  +P E
Sbjct:  178 PRGSATAGASEKGSKGLRHFSMKVCQKVEEKHVTSYNEVADELVHEFVTMRPSDSV----YDEKNIRRRVYDALNVLMAMDIISKEKKEIRWRGLPSNA-KQDLEILTMEKAQRLKSIEQKKQQLQELLLQQIALKNLVRRNAAEAVT------------------APALSHITLPFILVNTCKDTVIQCEMSEDRQDIFFNFSGPFEINDDSEILKRMELHKASAADIKDLVPEKLLRYLPPE 398
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15154.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G596_ECTSI1.570e-24179.21Putative DP transcription factor n=2 Tax=Ectocarpu... [more]
A0A2D4C957_PYTIN5.830e-6250.00Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A8K1CI48_PYTOL6.850e-6251.88Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WUL3_GLOUD6.450e-6050.82Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6Y9W8_9STRA6.930e-6047.65Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A485KV23_9STRA1.210e-5947.51Aste57867_12256 protein n=1 Tax=Aphanomyces stella... [more]
A0A8J6CHE7_DIALT1.440e-5950.81Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
W4FM68_9STRA1.660e-5947.45Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A3F2S1S5_9STRA7.540e-5949.58Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A1V9ZDW0_9STRA1.530e-5850.00Transcription factor Dp-1 n=1 Tax=Achlya hypogyna ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:1455076..1462767 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score700.3
Seed ortholog evalue7e-199
Seed eggNOG ortholog2880.D7G596
Preferred nameTFDP1
KEGG koko:K04683,ko:K09392,ko:K09393,ko:K09394
KEGG Pathwayko04110,ko04350,map04110,map04350
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000082,GO:0000083,GO:0000278,GO:0000981,GO:0002009,GO:0002064,GO:0002065,GO:0002066,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0003713,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005667,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006277,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006810,GO:0006839,GO:0006915,GO:0006950,GO:0006974,GO:0006977,GO:0006996,GO:0007005,GO:0007006,GO:0007049,GO:0007093,GO:0007113,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007304,GO:0007306,GO:0007307,GO:0007346,GO:0007389,GO:0007548,GO:0008022,GO:0008069,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008283,GO:0008285,GO:0008406,GO:0008544,GO:0008630,GO:0009058,GO:0009059,GO:0009653,GO:0009798,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009950,GO:0009953,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010453,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010623,GO:0010628,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010720,GO:0010821,GO:0010822,GO:0010927,GO:0010941,GO:0010942,GO:0010948,GO:0012501,GO:0012505,GO:0016043,GO:0016333,GO:0016334,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019904,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030154,GO:0030330,GO:0030703,GO:0030707,GO:0030855,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031523,GO:0031570,GO:0031571,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032989,GO:0032991,GO:0033043,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035189,GO:0035556,GO:0040027,GO:0040028,GO:0042023,GO:0042127,GO:0042659,GO:0042770,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043276,GO:0043900,GO:0043902,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044773,GO:0044774,GO:0044783,GO:0044786,GO:0044798,GO:0044819,GO:0044843,GO:0045137,GO:0045476,GO:0045477,GO:0045595,GO:0045597,GO:0045786,GO:0045787,GO:0045850,GO:0045892,GO:0045893,GO:0045930,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046578,GO:0046580,GO:0046902,GO:0046982,GO:0046983,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048608,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051049,GO:0051050,GO:0051052,GO:0051056,GO:0051058,GO:0051093,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051241,GO:0051252,GO:0051253,GO:0051254,GO:0051302,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0060284,GO:0060341,GO:0060429,GO:0061024,GO:0061062,GO:0061064,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070201,GO:0070316,GO:0070317,GO:0070344,GO:0070345,GO:0071156,GO:0071158,GO:0071704,GO:0071840,GO:0071897,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0090559,GO:0090575,GO:0097159,GO:0097190,GO:0097193,GO:0140110,GO:1900739,GO:1900740,GO:1901028,GO:1901030,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902531,GO:1902532,GO:1902679,GO:1902680,GO:1902742,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903507,GO:1903508,GO:1903747,GO:1903749,GO:1903827,GO:1903829,GO:1904747,GO:1904748,GO:1904951,GO:1905475,GO:1905477,GO:1905879,GO:1905881,GO:2000026,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000241,GO:2000243,GO:2000278,GO:2001141,GO:2001233,GO:2001235
EggNOG free text desc.cell cycle
EggNOG OGsKOG2829@1,KOG2829@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDP transcription factor
Ec32 orthologEc-14_006710.1
Exons10
Model size2470
Cds size1587
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15154.1prot_P-fluviatile_contig9.15154.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 1455856..1462664 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817322.9922938-UTR-P-fluviatile_contig9:1455075..14558551622817322.9922938-UTR-P-fluviatile_contig9:1455075..1455855Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 1455076..1455855 -
1693572059.9190423-UTR-P-fluviatile_contig9:1455075..14558551693572059.9190423-UTR-P-fluviatile_contig9:1455075..1455855Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 1455076..1455855 -
1622817323.1597517-UTR-P-fluviatile_contig9:1462664..14627671622817323.1597517-UTR-P-fluviatile_contig9:1462664..1462767Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 1462665..1462767 -
1693572060.0720909-UTR-P-fluviatile_contig9:1462664..14627671693572060.0720909-UTR-P-fluviatile_contig9:1462664..1462767Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 1462665..1462767 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817323.0040066-CDS-P-fluviatile_contig9:1455855..14559961622817323.0040066-CDS-P-fluviatile_contig9:1455855..1455996Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1455856..1455996 -
1693572059.943546-CDS-P-fluviatile_contig9:1455855..14559961693572059.943546-CDS-P-fluviatile_contig9:1455855..1455996Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1455856..1455996 -
1622817323.0142512-CDS-P-fluviatile_contig9:1456267..14563371622817323.0142512-CDS-P-fluviatile_contig9:1456267..1456337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1456268..1456337 -
1693572059.9577994-CDS-P-fluviatile_contig9:1456267..14563371693572059.9577994-CDS-P-fluviatile_contig9:1456267..1456337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1456268..1456337 -
1622817323.027718-CDS-P-fluviatile_contig9:1456990..14570851622817323.027718-CDS-P-fluviatile_contig9:1456990..1457085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1456991..1457085 -
1693572059.972901-CDS-P-fluviatile_contig9:1456990..14570851693572059.972901-CDS-P-fluviatile_contig9:1456990..1457085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1456991..1457085 -
1622817323.041343-CDS-P-fluviatile_contig9:1457954..14581981622817323.041343-CDS-P-fluviatile_contig9:1457954..1458198Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1457955..1458198 -
1693572059.9840372-CDS-P-fluviatile_contig9:1457954..14581981693572059.9840372-CDS-P-fluviatile_contig9:1457954..1458198Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1457955..1458198 -
1622817323.0555186-CDS-P-fluviatile_contig9:1458665..14588681622817323.0555186-CDS-P-fluviatile_contig9:1458665..1458868Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1458666..1458868 -
1693572059.99482-CDS-P-fluviatile_contig9:1458665..14588681693572059.99482-CDS-P-fluviatile_contig9:1458665..1458868Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1458666..1458868 -
1622817323.0680974-CDS-P-fluviatile_contig9:1459186..14592591622817323.0680974-CDS-P-fluviatile_contig9:1459186..1459259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1459187..1459259 -
1693572060.0054991-CDS-P-fluviatile_contig9:1459186..14592591693572060.0054991-CDS-P-fluviatile_contig9:1459186..1459259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1459187..1459259 -
1622817323.11602-CDS-P-fluviatile_contig9:1459451..14599381622817323.11602-CDS-P-fluviatile_contig9:1459451..1459938Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1459452..1459938 -
1693572060.0164871-CDS-P-fluviatile_contig9:1459451..14599381693572060.0164871-CDS-P-fluviatile_contig9:1459451..1459938Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1459452..1459938 -
1622817323.1287634-CDS-P-fluviatile_contig9:1460575..14606661622817323.1287634-CDS-P-fluviatile_contig9:1460575..1460666Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1460576..1460666 -
1693572060.0359955-CDS-P-fluviatile_contig9:1460575..14606661693572060.0359955-CDS-P-fluviatile_contig9:1460575..1460666Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1460576..1460666 -
1622817323.1393251-CDS-P-fluviatile_contig9:1462045..14621201622817323.1393251-CDS-P-fluviatile_contig9:1462045..1462120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1462046..1462120 -
1693572060.0549939-CDS-P-fluviatile_contig9:1462045..14621201693572060.0549939-CDS-P-fluviatile_contig9:1462045..1462120Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1462046..1462120 -
1622817323.1496167-CDS-P-fluviatile_contig9:1462556..14626641622817323.1496167-CDS-P-fluviatile_contig9:1462556..1462664Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1462557..1462664 -
1693572060.063498-CDS-P-fluviatile_contig9:1462556..14626641693572060.063498-CDS-P-fluviatile_contig9:1462556..1462664Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 1462557..1462664 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15154.1

>prot_P-fluviatile_contig9.15154.1 ID=prot_P-fluviatile_contig9.15154.1|Name=mRNA_P-fluviatile_contig9.15154.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=529bp
MAKPDKREMESLIFPSYATSPTPFGLSSAGLWDEIEDNGKNSSSRRKHDD
TLNDELLTMLKDAGLENMALEVGTVQGGQIAALQDGKEGGQGSVAQMLRP
FSVAGDATSPVAMTASAIFSPKPRGVAPALDSPLLLKRSLGSPAPPISMT
ASAIFSPNPRAHRGDGGALSHLTESPAAIRGTDLRQVASAESDTPPKSKP
YTKRARKSLPEAAAPPPPPLPPRDLPPPEPVPPPPAGRTRRACTNYAADA
SGETEPRAKRTKKVDTKPNKGLRHFSVKVCRKVEEKRTTTYNEVADELVQ
ELAAEGEFGSGKEPHYDDKNIRRRVYDALNVLMAIDIISKDRKEIKWKGL
PENAARSGLGALQREKLDRERSLDGKKGQLADLLVQQISFRNLARRNRSN
ATARAGAAGNGAECARDHDTDELAASKIFVPFIVVSSSNDTVIQCEMAEN
REDVFFNFSHEFQIADDNEILKRLGMHRCRKQDLPVLLARELIPQVPAEV
YTRDDADDSMSSSSPSSPASSCSEYSPT*
back to top

mRNA from alignment at P-fluviatile_contig9:1455076..1462767-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15154.1 ID=mRNA_P-fluviatile_contig9.15154.1|Name=mRNA_P-fluviatile_contig9.15154.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7692bp|location=Sequence derived from alignment at P-fluviatile_contig9:1455076..1462767- (Porterinema fluviatile SAG_2381)
TTCCTTCCGACGCTCTCCATCGAGGAACATCGGCCCTCTCCCACTCTCGC
TTCTGCCCCCTCTCTTCCTTCCATGAGGTAGGAGTGAACGACGCACACAG
CTCATGGCCAAACCAGACAAACGAGAGATGGAGAGCTTGATCTTCCCGAG
TTATGCCACATCTCCGACACCATTCGGGCTAAGCAGTGCAGGCTTGTGGG
ACGAGATCGAGGTGAGTGCGTCCGGCATTCGCTATGCGCTCTGTAGTTTC
AAATGTAGCCCTCGCAACCACAGCTGAGCACGCCAATCTTCTATCACACG
CAAGGGCAAGGGAGAAGTGTGATTGTGAAATAAAGATCGGCAACGATAAA
ATATTCTTCGGCGAGGGGCGAGCGTTGAGTGTAGGGGAGACCAGCACAAC
AGCGTCGGGCTTGACGATGAGTCATAGCCCAGCTATAGGGCGATGTAGGT
TGGTCCTAGATCAAATGCCATGCCTGGAGGTCCTCGTACCGGCGGTGTCT
GGATTCTTACATCATCGTGTAGGTCCCCTCGCCGGTCCCGCACACACGCC
TCTGCTGCGCTCATTTGAAGCGAGTGTGCGAGAGGGCAACTGCCAGCCGT
TCGACGCCTTTGCGATTAACCCCTTCCCCCGCTCACGTTGGTAGCAGGAT
AACGGCAAAAACAGCAGCTCGAGGAGGAAGCACGACGACACCCTGAACGA
CGAACTTCTCACCATGCTCAAGGTGAAGCCGTTCACCCTCGTGCCGCGGC
GGTGTGTGTGTCGTTCGTTATTCTTCCGTGTTCCTTTCGATCGCACACTT
CCGACCACACCGACGTACACACAACCGTAGCAGCAAGAGAGGGACGGCAG
GAGCATGGCAGTCTTTCGGATCTACTGCCCTTACTCCATGGAGGAGTGGC
AATTTGCTGCTTTCATGCTTCCACTTTTCCTTGCATGCGCCCTTGGACAT
TTTCGCAGCCTCGGAGGAAGAAGTTGTACTTAACTCTGGTCTTTGGTCCT
TGTTGGGGCCTTGTTGATGCCAACTTTGGCCCCTAATCTTGCGCGAATGC
CATGCCCCCACTCACTCTCCCTGAAAAGGCTCAGTTTCCCTTTTTCGCCT
TCCCATCGCGCATGAAAGCGGGGGTGATGACCTAGAGCAGCACTCGTGCC
TTCACTACTGAAATGCGTTGCGGGCGGATTTTCCCGACGTGGGCGCCGTT
GTTTCTGGGGGCGGTGTACCGCATACGCTCGATCTCCAATATTCTATTCC
GCCCTCGAGTCGTGGACCCCTGGCTTCGAATCGTCGCTTGGCGAGCGGTA
AAAGTTCGCAGTTATGTGGTCCCCCGACAAGCCGAAAAGGTGTTGATTTG
GACACCACGTACGATACCCCCGCGCTCCCTTCTTTCGGCGGTGGAGATAA
TTGACAATTTGTAGCGGTTGCTGATTATTGACCGGTGCTGCTGCGTCTTG
GCCACCTACTGCCCGTCGTTTGGCTGTGTTCGTTGGAGATGAAACTTGTA
ATGAGATGGAAAAACACATGTATAGCGCGCACACACAGGCCCCGCCGCCC
AACATGGCGGAACGGTGCAACACTGCAACGAGATGGGGCCTGCACACAAC
AAGCTGACTGTCGCATCTGGAAAATGTTGGAGAGTCGCACATCTAATTCG
CACGTGGTATGCAGCAAATCTGATCTTTTGGGGGACATCCATTGGAGACG
GCCTGCTTCGGCTTACAGACCGCTTTCTGACTGCTTTGTGGTGTTCTGCA
TTTGCTGCCGGTTAGCCCGTGCGCGAGAGGTGCCGCGGCAAATTCAGCGT
GCGGGAATAGTTGGCTTTTTTGGTGGCGCCCGGTGAGAGCGCCCACAGTA
AAAAGCTTTGCGTTGGCGCTTGCAAGCGACCACATACACTGTGGATCACG
TGTGCGTGCATCCCTGTCACAGCGGTAAGGTCGTACCTTGTCTTAGGCTC
TACTTTGCGGCCGTGACCCCCTCCCAGATTTATCTGCATGTTCCCATATC
CAGAACGTCGCCTGGCTGTCGTGATGCGTTTGGCATGGCTTCGCTACTTT
CACTAACTGCTTCTGCGTGCTCTTGTGTCTTGTCGCTCGTTTCCTCCGCA
GGACGCGGGGTTGGAGAACATGGCGCTGGAAGTGGGCACGGTGCAGGGAG
GCCAGATCGCTGCTCTGCAGGATGGCAAGGAAGGAGGGCAAGGTAGAAGC
TGCTTCAGTTGTTGGCAAACAGCCACCTCTTGTTCCAGGGCGTAGAAGAT
GGGGTTGTCTTTTTCGTCTTTTAGCCCTCCGACTTTACGGCGCATGTGTC
GATGTCTAGCAGGAAAAGATTCCAGCGCTGCGACTTTGAGGTCTCGGTGT
GGGGGAAAGGAAGGGAGGTAGGTCGGATCGTTGCGGTGCGGAACTGTACG
ATAGACTTTGCACGCGGTACGTACCGCCCTCGTGAACGTATTTGCCCTCA
ACGGTGACCCCGTTTCAGGTGCAACAGGTTGAAGGTTGGCACACATTAAT
TCACACGCACAGACCGCGTGCTCCCTCGCATGGCTGATAAGCCTCGTCGG
CACTGGACCTCGTGTTTCGTCCCACCTCAGCCCCTGAGGTTCTGCCTTGC
AACGGAGATGCATATCCGTCGGTTGTAGTGTTTGACGGTGTTGAGTCACG
CATCAAAAGAGTGGATCATCATCCTGGCAGCCGGGCGGGTTCGTTTTCCT
CGGTGCGGTCGCTCTGACTGCACGTTACAACTCGCAATGGCCAAAGGTGT
GGCAGTCCGGTGGAAAAGTCCCGTCCTACGGTTGCCCCCTTACCGTAAAG
TGGTCGAACATCTCCCCCTTCCTCGCAAGGCTCGGTGGCACAAATGTTGC
GTCCGTTTTCTGTAGCAGGCGATGCCACTTCCCCGGTAGCGATGACAGCG
TCCGCCATCTTCTCACCAAAACCGCGGGGGGTCGCCCCTGCACTGGACTC
TCCCCTGCTTCTCAAGCGGTCCTTGGGCTCCCCTGCTCCTCCGATATCGA
TGACCGCCTCCGCGATATTCTCGCCGAACCCGCGGGCGCATCGTGGTGAC
GGCGGGGCGCTTTCACACCTGACGGAATCCCCCGCGGCGATACGGGGGAC
CGACCTGAGGCAGGTGGCGTCGGCAGAGTCTGACACCCCTCCGAAATCGA
AACCGTACACCAAGAGAGCACGAAAGTCGTTGCCAGAGGCGGCGGCGCCG
CCGCCGCCGCCGCTTCCCCCGAGAGATCTACCGCCACCGGAGCCGGTCCC
ACCTCCGCCTGCGGGGCGAACCCGGCGAGCGTGTACCAACTATGCCGCGG
ACGCTTCGGGTGAAACGTGAGAGTGTAGCTGGTTTGAATTTGCGATCGGG
TGAAGGATGAGGGGCTGGATGATACGAGGAGGGGGCAGAGGAATGAGGTT
TGCGTGACAAGTGACCGATGATTGCGTGCGGACACCGCCAGCATTCTGCC
GTACCGATAAGGTGGACGTCGTATTTTGTCTTTCCGTTGATTTCATGGTG
CCGCACAGTGAGCCCCGAGCAAAGCGGACGAAGAAGGTGGACACCAAGCC
GAACAAGGGTCTCCGACACTTCAGCGTCAAGGTGAGAATGCTTCAAGCAC
GCACGGGTTGTGCCACCTTGTCCTGCGCAAGCACATCGCACAGCGACAGC
GACAATCTGCGGAAAATTCGTCCCATTGGGAAGAAGCAGGAGTACCCTCA
CAGAGCAAAAAAACGTCGTCAGAGTCGTGGCAAATGATGCCAACGCCGTC
CTATACTTCTGGCTGCGAATGATAGCAAAATATCACCCAAAAATCAGGAC
CAGCTCCGTTTCTTGCAACAAAAACGGCCGTCTACAAATGCGTGTATTTC
ACTTCGTCTCTCTTTTCCTTCGTGCACTCTTGTTCCCTTTCTCCTAAAGG
TTTGTCGCAAGGTGGAAGAGAAAAGAACTACAACGTACAACGAGGTGGCT
GACGAGCTGGTACAGGAGCTCGCGGCGGAGGGGGAGTTCGGCTCGGGGAA
GGAGCCCCACTACGATGATAAGAACATCCGGCGGAGAGTTTACGATGCCC
TGAACGTGCTCATGGCCATAGACATCATCTCCAAGGATCGGAAGGAGATC
AAGTGAGTGAGCATCGCGCAGCGGTTACATGAGCGTTTTGTGTTGTTCTC
AGCTGCGGTTGTGACCCAGCTACATGTCTGTTGGACGGCAGACTGCCCCC
CTGGCTTTCCAACGTTCGGCATGGTTGCGTGCCGTGGAATATCTCGGGGT
CTCGGAGTATATTCAGGGCTAAGGGTACTAGCCTAGAGGCCATGGCGAAA
GACACCGTTTCGACACCGAGGTTAGTTTGTGTCAAGATAAGGTGTGCTGG
TGCTGCAGGAGCCTCTGCTCCTTTGCTCTGGCGTCCCAGCGGTACTGCCG
AGGTAAACCGCGACCACGGGTTGCTGCTGGTGGTACGACAACTGCTCGCG
TTGGGCTCGACATGTCCGTTCCACGCCTAACAACCACGCTGCAAGCGCGG
CAAGGCTCTTCTATCTCGTCATGATTTCACTAACGCCTGACACCGCTTGT
TTGCTTCTGCGCGACGCAGGTGGAAGGGGCTCCCCGAAAATGCTGCCCGA
TCAGGGCTGGGCGCTCTCCAGCGGGAAAAGCTGGATCGCGAACGCTCGCT
GGACGGCAAGAAGGGCCAGCTGGCAGACCTGCTGGTGCAGCAGATATCCT
TCCGAAACCTGGCTCGCAGAAACCGTTCGAACGCGACCGCAAGGGCCGGC
GCCGCGGGAAACGGGGCGGAGTGTGCGCGAGATCATGACACCGACGAGCT
GGCGGCCTCGAAGGTGAAATTCTGCCGTAACGTTTTCCGCCAGCGCGTCT
TCTGTCACCGTATCGCATGGCCCTTCCTTAGAACGAAAGAAGAAAATCGG
TTGAAATCATTAACGCTGCGCCATGCTTGAGTTGTTGATGTTTGTTCCAG
GATGCGCTTCGCACCTCGTGGTCAATTGTTGCATCACCAAGGCGAGAGCA
TGAGCATGCCGCCCTCCCCGATGCCCCCCCCGCCCCATTTTTGTTCAGCG
CCGGGGCAATTTTTCTCCATCCTTTCGTCCCCCCCCCTCGAGACGAACGC
AGACAAATTGTCAGTGTTTGAAAGACAGTGGGTGAGATCGCCCGTTTCTT
CCGGCTTTTTCTTTTGGTCGACCGAAGAGATGTCAATTCAGCGAGTCGCA
CGAACGGCGGAAGCGTCTCGGCGGCCATGTTCGCCCCCTCTTCCGACACT
CCGTAAATTCCTGTCATGGGTGCTGTCCACGCCCGGCACCCGCGGCAGGG
TCCACGATGTGTGCAGAGCGTGTTACCGGGTGACGAGCGCTGATTTTTCG
AATTTTCGAAACCAGTCAACGTTTAAGGTGGCACTCCCCCACCACGTGTC
CCGCCGAGAGGTCGTTGTTTCCCACGAGACTTCAAGATAGCTCTACCGGG
TTCTTATTGAAGACTCCTCGGTGGTTGTGGATCCCAGCATTGCGTTGTAA
GCACGACCCACATGACTCGCAACAGCAACGTACGACAGAAGATGGTCGAA
GGCGTTCTTCAGCCCTTTTCTACGAAAGCGATCATTCGTGACACGATTTC
GTACCGAACGCCACGCTCGCCTCGCGTGCAACTCGTGCCCTTTTGCTGCT
GGTGTGCTATGCACCCCGTGTCGAGACTGCAGATTTTCGTGCCTTTTATC
GTTGTGAGTTCGAGCAATGACACCGTCATTCAGTGCGAGATGGCGGAGAA
CCGAGAAGATGTTTTCTTCAACTTCAGGTGGGTACGGGAGGGTGTTCGTT
CGTCCATCGGCCGTTTTAATGGGATGGTCGTCGTTTCCGAGCGTCGCGCG
CCTCGCAGGAGTACGGAAAGCACCGGAGAGAACGCGCGGCGTGAAATGTA
GGTTTCCAGCAAAGCCCAGCACGCCGACAATCCACAGGGTGTCAAAGATT
TCTAGCTCCATCTGGAGTCAGACCTTGGCCATGTCTTTCTCCGCGAACAA
ATCCTTCCCAGCATTTCTCACTTGACCTCCCCCCCCCCCTCGGTTGTGAA
GGTCGATTGGGCTAGGAAATTGGTTTTGCGCCGGGTGTTGATCACCAAAA
ATGTGTACCGGTATGCCCCGTTGCACTTCGGCGGCCCCTCCATGCTGCAC
TTGGTCCGCTGATCACAAGTCGAATCAAACTTTTCAATGGGCCAAAGTTT
TGGACGGGCACGTTGCGAAAATCTGGAAATGAGGAAGTCATGAATGTTTG
TTGGTGCCGCTACGGCGTTCCATTCCATGGCCGGCAACAACCAAGCCATG
CTCCACAGGCCGAGCTTTGTTCGCGGGGATGGGAGTGGCTTGAAACGGTG
TGGCGGTGTTTTGATGAGTCAACGTATCTGACGGTTGGACCATCCACCCG
TTGTCGTTTTCGTGCCTCGTGCGTGGCCAGTCACGAGTTCCAGATCGCGG
ACGACAACGAAATTCTCAAGCGTCTCGGCATGCACCGGTGCCGGAAACAG
GTGTGAGTAGGGCGTGCTCGTTCTCGTGACGGCCGCGTTCGTTCGTGTCC
TTCCCTCTTTGGCGTGTGTCCTTAGGTGCGTTCCACAGCCTCGAGACGGC
TCCGATTTGTTGTGCTCGCCAGTGCCGTCGGATTCGGGTTTTGTTGTCGG
CTCGAGGGGCCAGTCATCGCCGCCCGACGAAACATGTCGGGACAGTCGAC
TCCGTTCATGTGCCCCGAGCTTGGAGGACTCATTCGAACACGCTTTTGCT
TTTGTTGTTCGGTGATGTCAGGACCTGCCGGTACTGCTCGCGCGGGAGCT
CATTCCTCAGGTCCCGGCGGAAGTCTACACGCGTGACGATGCCGACGATT
CGATGTCGTCGTCGTCGCCCTCTTCCCCCGCTTCCTCCTGCTCCGAGTAT
TCCCCGACGTAGCGGTTGCCGGTTGTTGGCAGTAGGTGTTTGGTGGAGAA
AGATATGTACAGGAATTGCGACGCTGCGTACCACCCACACCATTTTAGCG
CTTTCAGGCAGGCGTTTGTTGCTATGCTGTGGCCAAGGGGTTTTTCAAGC
TGGCGGGGGGTGGTTTTAGCGTGAAGCGCAGGGAGGCGGGGGGTTGTCGC
AGGGTTTGTTGCTCCTGCTGATAATCCCCTGCTTGGTTGTGAAAAGACTG
TTATTTTTCAGGGGCGTTGTCGAGGCCTGGGGTGGAGCCGCTTATCATTT
TTCTCGATGTTTCGTCTTACTTTTTTAGTTGAAAATTTCAAATATACATG
TACCTTAGTCGCAAAGATTCGAGTTTGGGCTATCTTCCGCCCCTCCTCTG
TTGTTCGTACACCGGATCGCTTTACTTTATTTTACTCAATGGGCTGCGGA
AGGAAGAGGAGGATTGGAGAGGATGATTTACCCATTGTTGAGTGCCCCTT
TCACGGCCGCATTGGGCGTATGAGTTTTCGTTGCATCGCGTCCGTCGTAG
TTCTGTGTACGCTGTCTTTCAAAGCACCAGGCGTTGCGTGTCGGCCAACG
CGAATTTTCCGGCAGCAGCTGCAGAGTTTTCGAGCGGCGCGTTTTGATTA
CACCAATGGAGTCTTCAATTACATCCTAAAGAGTGAGCGCTTCGCGCAAA
CGATCGACATTGTCAAACGTCGACGGGGGCTAAACAAAGGCTGTCCTGAA
TCCGCCCACGCTATCGGAGCTTCAACCCCCCCCCATCATGCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig9:1455076..1462767-

>mRNA_P-fluviatile_contig9.15154.1 ID=mRNA_P-fluviatile_contig9.15154.1|Name=mRNA_P-fluviatile_contig9.15154.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3174bp|location=Sequence derived from alignment at P-fluviatile_contig9:1455076..1462767- (Porterinema fluviatile SAG_2381)
ATGGCCAAACCAGACAAACGAGAGATGGAGAGCTTGATCTTCCCGAGTTA
TGCCACATCTCCGACACCATTCGGGCTAAGCAGTGCAGGCTTGTGGGACG
AGATCGAGATGGCCAAACCAGACAAACGAGAGATGGAGAGCTTGATCTTC
CCGAGTTATGCCACATCTCCGACACCATTCGGGCTAAGCAGTGCAGGCTT
GTGGGACGAGATCGAGGATAACGGCAAAAACAGCAGCTCGAGGAGGAAGC
ACGACGACACCCTGAACGACGAACTTCTCACCATGCTCAAGGATAACGGC
AAAAACAGCAGCTCGAGGAGGAAGCACGACGACACCCTGAACGACGAACT
TCTCACCATGCTCAAGGACGCGGGGTTGGAGAACATGGCGCTGGAAGTGG
GCACGGTGCAGGGAGGCCAGATCGCTGCTCTGCAGGATGGCAAGGAAGGA
GGGCAAGGACGCGGGGTTGGAGAACATGGCGCTGGAAGTGGGCACGGTGC
AGGGAGGCCAGATCGCTGCTCTGCAGGATGGCAAGGAAGGAGGGCAAGGC
TCGGTGGCACAAATGTTGCGTCCGTTTTCTGTAGCAGGCGATGCCACTTC
CCCGGTAGCGATGACAGCGTCCGCCATCTTCTCACCAAAACCGCGGGGGG
TCGCCCCTGCACTGGACTCTCCCCTGCTTCTCAAGCGGTCCTTGGGCTCC
CCTGCTCCTCCGATATCGATGACCGCCTCCGCGATATTCTCGCCGAACCC
GCGGGCGCATCGTGGTGACGGCGGGGCGCTTTCACACCTGACGGAATCCC
CCGCGGCGATACGGGGGACCGACCTGAGGCAGGTGGCGTCGGCAGAGTCT
GACACCCCTCCGAAATCGAAACCGTACACCAAGAGAGCACGAAAGTCGTT
GCCAGAGGCGGCGGCGCCGCCGCCGCCGCCGCTTCCCCCGAGAGATCTAC
CGCCACCGGAGCCGGTCCCACCTCCGCCTGCGGGGCGAACCCGGCGAGCG
TGTACCAACTATGCCGCGGACGCTTCGGGTGAAACGCTCGGTGGCACAAA
TGTTGCGTCCGTTTTCTGTAGCAGGCGATGCCACTTCCCCGGTAGCGATG
ACAGCGTCCGCCATCTTCTCACCAAAACCGCGGGGGGTCGCCCCTGCACT
GGACTCTCCCCTGCTTCTCAAGCGGTCCTTGGGCTCCCCTGCTCCTCCGA
TATCGATGACCGCCTCCGCGATATTCTCGCCGAACCCGCGGGCGCATCGT
GGTGACGGCGGGGCGCTTTCACACCTGACGGAATCCCCCGCGGCGATACG
GGGGACCGACCTGAGGCAGGTGGCGTCGGCAGAGTCTGACACCCCTCCGA
AATCGAAACCGTACACCAAGAGAGCACGAAAGTCGTTGCCAGAGGCGGCG
GCGCCGCCGCCGCCGCCGCTTCCCCCGAGAGATCTACCGCCACCGGAGCC
GGTCCCACCTCCGCCTGCGGGGCGAACCCGGCGAGCGTGTACCAACTATG
CCGCGGACGCTTCGGGTGAAACTGAGCCCCGAGCAAAGCGGACGAAGAAG
GTGGACACCAAGCCGAACAAGGGTCTCCGACACTTCAGCGTCAAGTGAGC
CCCGAGCAAAGCGGACGAAGAAGGTGGACACCAAGCCGAACAAGGGTCTC
CGACACTTCAGCGTCAAGGTTTGTCGCAAGGTGGAAGAGAAAAGAACTAC
AACGTACAACGAGGTGGCTGACGAGCTGGTACAGGAGCTCGCGGCGGAGG
GGGAGTTCGGCTCGGGGAAGGAGCCCCACTACGATGATAAGAACATCCGG
CGGAGAGTTTACGATGCCCTGAACGTGCTCATGGCCATAGACATCATCTC
CAAGGATCGGAAGGAGATCAAGTTTGTCGCAAGGTGGAAGAGAAAAGAAC
TACAACGTACAACGAGGTGGCTGACGAGCTGGTACAGGAGCTCGCGGCGG
AGGGGGAGTTCGGCTCGGGGAAGGAGCCCCACTACGATGATAAGAACATC
CGGCGGAGAGTTTACGATGCCCTGAACGTGCTCATGGCCATAGACATCAT
CTCCAAGGATCGGAAGGAGATCAAGTGGAAGGGGCTCCCCGAAAATGCTG
CCCGATCAGGGCTGGGCGCTCTCCAGCGGGAAAAGCTGGATCGCGAACGC
TCGCTGGACGGCAAGAAGGGCCAGCTGGCAGACCTGCTGGTGCAGCAGAT
ATCCTTCCGAAACCTGGCTCGCAGAAACCGTTCGAACGCGACCGCAAGGG
CCGGCGCCGCGGGAAACGGGGCGGAGTGTGCGCGAGATCATGACACCGAC
GAGCTGGCGGCCTCGAAGGTGGAAGGGGCTCCCCGAAAATGCTGCCCGAT
CAGGGCTGGGCGCTCTCCAGCGGGAAAAGCTGGATCGCGAACGCTCGCTG
GACGGCAAGAAGGGCCAGCTGGCAGACCTGCTGGTGCAGCAGATATCCTT
CCGAAACCTGGCTCGCAGAAACCGTTCGAACGCGACCGCAAGGGCCGGCG
CCGCGGGAAACGGGGCGGAGTGTGCGCGAGATCATGACACCGACGAGCTG
GCGGCCTCGAAGATTTTCGTGCCTTTTATCGTTGTGAGTTCGAGCAATGA
CACCGTCATTCAGTGCGAGATGGCGGAGAACCGAGAAGATGTTTTCTTCA
ACTTCAGATTTTCGTGCCTTTTATCGTTGTGAGTTCGAGCAATGACACCG
TCATTCAGTGCGAGATGGCGGAGAACCGAGAAGATGTTTTCTTCAACTTC
AGTCACGAGTTCCAGATCGCGGACGACAACGAAATTCTCAAGCGTCTCGG
CATGCACCGGTGCCGGAAACAGTCACGAGTTCCAGATCGCGGACGACAAC
GAAATTCTCAAGCGTCTCGGCATGCACCGGTGCCGGAAACAGGACCTGCC
GGTACTGCTCGCGCGGGAGCTCATTCCTCAGGTCCCGGCGGAAGTCTACA
CGCGTGACGATGCCGACGATTCGATGTCGTCGTCGTCGCCCTCTTCCCCC
GCTTCCTCCTGCTCCGAGTATTCCCCGACGTAGGACCTGCCGGTACTGCT
CGCGCGGGAGCTCATTCCTCAGGTCCCGGCGGAAGTCTACACGCGTGACG
ATGCCGACGATTCGATGTCGTCGTCGTCGCCCTCTTCCCCCGCTTCCTCC
TGCTCCGAGTATTCCCCGACGTAG
back to top