mRNA_P-fluviatile_contig9.15089.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15089.1
Unique NamemRNA_P-fluviatile_contig9.15089.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: D8LC94_ECTSI (SET domain and mariner transposase fusion n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC94_ECTSI)

HSP 1 Score: 332 bits (852), Expect = 3.090e-97
Identity = 189/325 (58.15%), Postives = 226/325 (69.54%), Query Frame = 2 
Query:   41 MTLLETL--SHSDTTTILLDYLSHSEIVHL-VTCTRLFALLSDAMSKRREDISCGDSPHPVPCDSLQ---HGDEP-----SSESSRRGKWSLGGPLPPKFTFLNEAIYTFEDSGDPPFDDLEGCACFGECDDGDEDNIASCPCIQLNVAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEKGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFV--IRR---GSFLRPRLAFFTRNRVEAGSELTYDYGATGSAGG 967
            M L+E L  S  +TT+ LL +L   + V   +T T LF  +   + K+ +DISCG SP+P+PCDS     HG +      SS SS+  KWSLGGP+PP F +LNEAI+ F+DSG    D+LEGCACFG C  G +D +  CPC+QLNVAVQSG APLFECH+ C+CG ACRLRATQ G  +K  VPP++RLRYMG+KGWGAY+V AI  GT+VA YTGEVLPV EARRRV  YDR GLNYVLTTQEFFQGGKQV++TI+DATT GNVSRFFNH C+PTL+VFV  +RR   G+F  PR    T  R           G T S GG
Sbjct:    1 MPLVEALVDSSCNTTSTLLSFLGWEDAVAFAITSTLLFVQVKAIIQKQCDDISCGSSPYPIPCDSAHRPLHGVQQATPGGSSHSSQSFKWSLGGPVPPSFMYLNEAIHAFDDSG---ADELEGCACFGGC--GVDDTL--CPCVQLNVAVQSGPAPLFECHTSCTCGIACRLRATQRGAASK--VPPMLRLRYMGKKGWGAYSVGAIAGGTYVADYTGEVLPVPEARRRVHAYDRDGLNYVLTTQEFFQGGKQVFQTIVDATTCGNVSRFFNHSCEPTLSVFVAVVRRLHVGAF-DPRADSHTGLRSAVWKSAGGSKGPTHSGGG 315
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BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: L8GPN6_ACACA (SET domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPN6_ACACA)

HSP 1 Score: 142 bits (358), Expect = 2.410e-34
Identity = 81/182 (44.51%), Postives = 97/182 (53.30%), Query Frame = 2 
Query:  407 DEDNIASCPCIQLNVAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGE-KGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRV-PVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDYG 946
            D D  A+          Q    PLFECHSRC C   C  R  Q G+    +V       +M   KGW    +  +  G FV+ Y GEV+   EA+RR    YDR GLNY+L  +EF        RT ID T  GNVSRFFNH CDP + +F++R GS + PRLAFF    V AG ELTYDYG
Sbjct:   43 DTDAAAAXXXXXXXXRPQPTDRPLFECHSRCGCSADCASRVVQKGITLPLEV-------FMSATKGWSVRVLSPVRKGQFVSEYAGEVVSTEEAQRRWRDEYDRAGLNYLLVVREFIPARGATLRTNIDGTRLGNVSRFFNHSCDPNMLLFLVRVGSLI-PRLAFFVCRDVAAGEELTYDYG 216
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BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: A0A7K8R1L4_9PASS (SETMR methyltransferase (Fragment) n=1 Tax=Smithornis capensis TaxID=363769 RepID=A0A7K8R1L4_9PASS)

HSP 1 Score: 137 bits (346), Expect = 1.230e-32
Identity = 84/209 (40.19%), Postives = 109/209 (52.15%), Query Frame = 2 
Query:  350 DPPFDDLEGCACFGECDDGDEDNIA-SCPCIQLN----------VAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEKGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDY 943
            DP    L GC+C      G    +A  CPC+               +Q GSAP+FEC + C C  +CR R  Q G++ + +V      +  G KGWG  T+EAIP G+FV  Y GEVL V EARRR+     +  NY+L  +E    G+ V  T +D T  GNV RF NH C+P L +  +R  S + PRLA F    + AG EL YDY
Sbjct:   15 DPTEITLPGCSC------GSSSCVAPECPCLWRGDSSSGQCLRGTELQGGSAPVFECSALCRCSDSCRNRLVQGGLRLRLQV-----FQSRG-KGWGVRTLEAIPRGSFVCEYAGEVLGVAEARRRILAQTPEDSNYILALREHLHDGR-VLETFVDPTHIGNVGRFLNHSCEPNLVMVPVRVHSMV-PRLALFAATDISAGEELCYDY 209
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BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: UPI001A9863EB (histone-lysine N-methyltransferase SETMAR n=1 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A9863EB)

HSP 1 Score: 122 bits (306), Expect = 5.590e-27
Identity = 85/243 (34.98%), Postives = 115/243 (47.33%), Query Frame = 2 
Query:  299 PKFTFLNEAIYTFEDSGDPPFDDLEGCACFGE--CDDGDEDNIASCPCIQ--------------LNVAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGE-KGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDYGATGSAGGILP 976
            P+F +  + +     + DP    L GC+C     C D       +CPC++              L  A     +P+FEC++ C+C  AC  R  Q G++ + +V       Y  E KGWG  T++AIP GTFV  Y GEV+ + EARRR         NY++  +E   G   V  T +D    GN  RF NH C P L +  +R  S + PRLA F    V A  ELT+DY  TG  G  LP
Sbjct:   24 PQFQYSPDNVQGPGCTTDPSEVTLPGCSCRSASCCSD-------TCPCLRTCGRAYDGAGALLALGAAGSGYCSPVFECNALCACSDACSSRVVQGGLRLRLEV-------YATENKGWGVRTLQAIPRGTFVCEYAGEVIGLEEARRRQLAQRPGDNNYIIAVREH-AGEGSVTETFVDPAAVGNAGRFLNHSCRPNLFMQPVRVHSLV-PRLALFAGRNVAAREELTFDY--TGGYGNRLP 248
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BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: UPI001B3AAF11 (histone-lysine N-methyltransferase SETMAR n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3AAF11)

HSP 1 Score: 121 bits (304), Expect = 1.380e-26
Identity = 65/169 (38.46%), Postives = 89/169 (52.66%), Query Frame = 2 
Query:  437 IQLNVAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEKGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDY 943
            + L  A     +P+FECH+ C+C   C  R  Q G++ + +V         G +GWG  T+EAIP GTFV  Y GEV+   EARRR      +  NY++  +E   G   +  T +D    GNV RF NH C P L +  +R  S + PRLA F    ++A  ELT+DY
Sbjct:   89 LNLTRADSGYCSPVFECHALCTCSDTCSNRVVQRGLRLRLEV------YCTGNRGWGVRTLEAIPQGTFVCEYAGEVISFEEARRRQLTQRSEDNNYIIAVREH-AGTGSIMETFVDPAVVGNVGRFLNHSCQPNLFMLPVRVHSVV-PRLALFAGRYIDAQEELTFDY 249
[Close]
BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: UPI00188733C8 (histone-lysine N-methyltransferase SETMAR isoform X1 n=3 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188733C8)

HSP 1 Score: 120 bits (301), Expect = 3.650e-26
Identity = 86/235 (36.60%), Postives = 111/235 (47.23%), Query Frame = 2 
Query:  350 DPPFDDLEGCAC-FGECDDGDEDNIASCPCIQLNVAVQSGS--------------APLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGE-KGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDYGATGSAGGILP----RGSDQQ 994
            DP    L GC+C F  C         +C C++       G+              +P+FEC++ C+C  AC  R  Q G++ + +V       Y  E KGWG  T+EAIP GTFV  Y GEV+   EARRR         NY++  +E   G   V  T +D   +GN  RF NH C P L +  +R  S + PRLA F    V A  ELT+DYG  G  G  LP    RG D Q
Sbjct:   55 DPSEVTLPGCSCRFASC------RPENCSCLRAYGVAYDGAGALLARGPAASGYCSPVFECNALCACSDACSSRVVQGGLRLRLEV-------YATEGKGWGVRTLEAIPRGTFVCEYAGEVIGPEEARRRQVAQRPGDNNYIIAVREH-AGEGSVTETFVDPAAAGNAGRFLNHSCRPNLFMQPVRVHSLV-PRLALFAGRDVAAREELTFDYG--GRYGSQLPAATQRGGDPQ 272
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BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: A0A5J5DJK1_9PERO (Uncharacterized protein n=5 Tax=Percidae TaxID=8165 RepID=A0A5J5DJK1_9PERO)

HSP 1 Score: 119 bits (299), Expect = 6.850e-26
Identity = 69/170 (40.59%), Postives = 91/170 (53.53%), Query Frame = 2 
Query:  437 IQLNVAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEK-GWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDY 943
            + LN       +PLFEC++ C+C  AC  R  Q G++ + +V       Y  EK GWG  T+EAIP GTFV  Y GEV+   EARRR      +  NY++  +E   G   V  T +D    GNV RF NH C P L +  +R  S + PRLA F    ++A  ELT+DY
Sbjct:   93 LNLNKTNSGYCSPLFECNALCTCSDACSNRVVQRGLRLRLEV-------YSTEKRGWGVRTLEAIPHGTFVCEYAGEVISFEEARRRQRAQRSEDNNYIIGVREH-AGTGCVTETFVDPAMVGNVGRFLNHACQPNLFMQPVRVHSVV-PRLALFAGRNIDAQEELTFDY 253
[Close]
BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: UPI0012EDE427 (histone-lysine N-methyltransferase SETMAR n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EDE427)

HSP 1 Score: 118 bits (295), Expect = 2.030e-25
Identity = 81/242 (33.47%), Postives = 112/242 (46.28%), Query Frame = 2 
Query:  299 PKFTFLNEAIYTFEDSGDPPFDDLEGCACFGECDDGDEDNIASCPCIQLNVAVQSGS--------------APLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMG--EKGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDYGATGSAGGILP 976
            P+F +  + I     + DP    L GC+C       +     +C C++        +              AP+FEC++ C+C  AC  R  Q G++        +RL   G   KGWG  T+ AIP GTFV  Y GEV+ + EARRR      +  NY++  +E   G   V  T +D    GNV RF NH C P L +  +R  S + PRLA F    ++A  ELT+DY  TG     LP
Sbjct:   30 PEFQYSTDNIQGPGCTADPTEVALPGCSCRSRSCCAE-----NCTCLRTRGRAYDSAGALLTLGPTDSGYCAPVFECNALCACSDACSNRVVQGGMR--------LRLEVYGTENKGWGVRTLGAIPRGTFVCEYAGEVIGLEEARRRQLAQSSEENNYIIAVREH-AGTGAVAETFVDPAAVGNVGRFLNHSCQPNLFMQPVRVHSLV-PRLALFAGRNIDAQEELTFDY--TGGYSNHLP 254
[Close]
BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: A0A3Q4B841_MOLML (SET domain and mariner transposase fusion gene n=1 Tax=Mola mola TaxID=94237 RepID=A0A3Q4B841_MOLML)

HSP 1 Score: 117 bits (294), Expect = 2.520e-25
Identity = 72/206 (34.95%), Postives = 98/206 (47.57%), Query Frame = 2 
Query:  368 LEGCACFGECDDGDEDNIASCPCIQLNVAVQSGS--------------APLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEKGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDY 943
            L GC+C       D     SC C+Q +    S +              +P+FEC++ C+C  AC  R  Q G++ + +V           KGWG  T+EA+P GTFV  Y GEV+   EARRR         NY++  +E   G   +  T +D    GNV RF NH C P L +  +R  S + PRLA F    + A  ELT+DY
Sbjct:   47 LPGCSCLSHSCFTD-----SCSCLQAHGQAYSSNGTLLKLSRTDSGYCSPVFECNALCTCSDACSNRVVQRGLRVRLEVFST------NNKGWGVRTLEALPHGTFVCEYAGEVISFEEARRRQWAQKSMENNYIIAVREH-AGTGSITETFVDPAVVGNVGRFLNHSCQPNLLMQPVRVHSVV-PRLALFAGRDINAQEELTFDY 239
[Close]
BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Match: A0A8C6SIW9_9GOBI (SET domain and mariner transposase fusion gene n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6SIW9_9GOBI)

HSP 1 Score: 117 bits (294), Expect = 2.570e-25
Identity = 89/277 (32.13%), Postives = 123/277 (44.40%), Query Frame = 2 
Query:  158 DAMSKRREDISCGDSPHPVPCDSLQHGDEPSSESSRRGKWSLGGPLPPKFTFLNEAIYTFEDSGDPPFDDLEGCACFGE-CDDGDEDNIASCPCIQLN--------------VAVQSGSAPLFECHSRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEKGWGAYTVEAIPAGTFVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDATTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYDY 943
            DA  +   D+SCG    P+         E +  SSRR          P F +  E +     +  P    + GC C    C       + SC C+  +               A  + ++P+FEC++ CSCG +C  R  Q+GV+ K +V           +GWG  T+E I  G FV  Y GEV+   EARRR      K  NY++  +E   G   V  T ID    GNV RF NH C P+L +  +R  S + PRL+ F    +EA  ELT+DY
Sbjct:    2 DASDRNVNDLSCGLENVPILI-------ETTVVSSRR----------PTFQYSPENVQGPGCAVHPSEVTITGCTCVAHSC------VLESCSCLLTHGQAYTLQGTLLARDTAHSTCTSPVFECNTLCSCGDSCSNRVVQSGVRHKLEV------FCTTNRGWGVRTLEPIQCGAFVCEYAGEVIGFDEARRRQLAQGPKDSNYIIAVREH-AGTGNVTETFIDPAKIGNVGRFLNHSCQPSLFMVPVRVHSVI-PRLSLFAGRNIEAKEELTFDY 247
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15089.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC94_ECTSI3.090e-9758.15SET domain and mariner transposase fusion n=1 Tax=... [more]
L8GPN6_ACACA2.410e-3444.51SET domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7K8R1L4_9PASS1.230e-3240.19SETMR methyltransferase (Fragment) n=1 Tax=Smithor... [more]
UPI001A9863EB5.590e-2734.98histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
UPI001B3AAF111.380e-2638.46histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
UPI00188733C83.650e-2636.60histone-lysine N-methyltransferase SETMAR isoform ... [more]
A0A5J5DJK1_9PERO6.850e-2640.59Uncharacterized protein n=5 Tax=Percidae TaxID=816... [more]
UPI0012EDE4272.030e-2533.47histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
A0A3Q4B841_MOLML2.520e-2534.95SET domain and mariner transposase fusion gene n=1... [more]
A0A8C6SIW9_9GOBI2.570e-2532.13SET domain and mariner transposase fusion gene n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:831259..835232 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score333.2
Seed ortholog evalue1.8e-88
Seed eggNOG ortholog2880.D8LC94
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11419,ko:K11433
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,map00310
GOsGO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0070013
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG1082@2759
EC2.1.1.43
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_005625.1
Exons4
Model size3072
Cds size1245
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15089.1prot_P-fluviatile_contig9.15089.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 831299..833445 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817314.5019288-UTR-P-fluviatile_contig9:831258..8312981622817314.5019288-UTR-P-fluviatile_contig9:831258..831298Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 831259..831298 +
1693572034.844962-UTR-P-fluviatile_contig9:831258..8312981693572034.844962-UTR-P-fluviatile_contig9:831258..831298Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 831259..831298 +
1622817314.5659232-UTR-P-fluviatile_contig9:833445..8352321622817314.5659232-UTR-P-fluviatile_contig9:833445..835232Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 833446..835232 +
1693572035.2196436-UTR-P-fluviatile_contig9:833445..8352321693572035.2196436-UTR-P-fluviatile_contig9:833445..835232Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 833446..835232 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817314.515382-CDS-P-fluviatile_contig9:831298..8317201622817314.515382-CDS-P-fluviatile_contig9:831298..831720Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 831299..831720 +
1693572034.8673384-CDS-P-fluviatile_contig9:831298..8317201693572034.8673384-CDS-P-fluviatile_contig9:831298..831720Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 831299..831720 +
1622817314.5248423-CDS-P-fluviatile_contig9:832106..8324011622817314.5248423-CDS-P-fluviatile_contig9:832106..832401Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 832107..832401 +
1693572034.883018-CDS-P-fluviatile_contig9:832106..8324011693572034.883018-CDS-P-fluviatile_contig9:832106..832401Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 832107..832401 +
1622817314.534466-CDS-P-fluviatile_contig9:832735..8328341622817314.534466-CDS-P-fluviatile_contig9:832735..832834Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 832736..832834 +
1693572035.1910386-CDS-P-fluviatile_contig9:832735..8328341693572035.1910386-CDS-P-fluviatile_contig9:832735..832834Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 832736..832834 +
1622817314.5513039-CDS-P-fluviatile_contig9:833016..8334451622817314.5513039-CDS-P-fluviatile_contig9:833016..833445Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 833017..833445 +
1693572035.2048008-CDS-P-fluviatile_contig9:833016..8334451693572035.2048008-CDS-P-fluviatile_contig9:833016..833445Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 833017..833445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15089.1

>prot_P-fluviatile_contig9.15089.1 ID=prot_P-fluviatile_contig9.15089.1|Name=mRNA_P-fluviatile_contig9.15089.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=415bp
MTLLETLSHSDTTTILLDYLSHSEIVHLVTCTRLFALLSDAMSKRREDIS
CGDSPHPVPCDSLQHGDEPSSESSRRGKWSLGGPLPPKFTFLNEAIYTFE
DSGDPPFDDLEGCACFGECDDGDEDNIASCPCIQLNVAVQSGSAPLFECH
SRCSCGTACRLRATQTGVKAKWKVPPLMRLRYMGEKGWGAYTVEAIPAGT
FVAGYTGEVLPVHEARRRVPVYDRKGLNYVLTTQEFFQGGKQVYRTIIDA
TTSGNVSRFFNHCCDPTLTVFVIRRGSFLRPRLAFFTRNRVEAGSELTYD
YGATGSAGGILPRGSDQQSSVQPQEPTRKTQRTSDADSHVESRPKGESPH
RSGKLSSGDNLLQLDGNDDQRQAWVAGGPSSIRGDDARSPTLRRPCLCGS
RRCRGVLPCNRVIL*
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mRNA from alignment at P-fluviatile_contig9:831259..835232+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15089.1 ID=mRNA_P-fluviatile_contig9.15089.1|Name=mRNA_P-fluviatile_contig9.15089.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3974bp|location=Sequence derived from alignment at P-fluviatile_contig9:831259..835232+ (Porterinema fluviatile SAG_2381)
CAACGGGACGACGGATGTTCTCTGCTTTTGCTCAGCACTCATGACGCTCT
TGGAGACGCTTAGTCACTCTGATACCACAACGATTCTCCTTGATTATTTA
TCTCATTCCGAAATCGTCCACTTAGTCACGTGCACTCGATTGTTCGCGCT
TTTGTCCGACGCGATGAGCAAACGGCGCGAAGACATTTCATGTGGAGACA
GCCCCCATCCCGTACCGTGCGACTCGCTGCAACACGGAGACGAACCTTCT
TCCGAATCATCTCGGCGTGGAAAATGGAGCCTCGGTGGACCCCTGCCGCC
GAAATTCACGTTCCTGAATGAAGCGATCTATACTTTCGAAGATTCCGGCG
ACCCACCCTTCGACGATCTCGAAGGATGTGCGTGTTTCGGAGAGTGCGAC
GACGGCGATGAGGACAATATTGCCTCTTGCCCCTGTATCCAGCTGAACGT
AGCTGTGCAAAGGTGAGACTCTATATGGTGCGTTTCACATGTTTGCAGAA
TCTTACACCGTTCCGCAATCCCATTTCATAGTGTGGTTGCGTAACTCGCA
CACCCTCCACATGCCCGAGTCCGTTCGTTACTGTCCGGTGAGCACCTGAA
CAGCAGTCGCGTCGTCGCCTCTTCACCCCTGCGTTCGTAGCATGTGCCTC
CTACATCCCGGTTCCAATTTGATTCCCTGCGTGTACGTTGTAGAACCAGA
TCTTGTGTCAACCATATTGCTCAACAGCAGTGTGGCACATCTGGCGCTTG
TTCTGAAACGTGCTGGCCCGAACCCGAACCCCCTCTGTCACCAACTGCCG
CCTGGCCCGTGCCCGCCCGAACGATACTACTTTCCTTCACCCACCAAGTG
GCTCTGCGCCGCTCTTTGAGTGCCACTCTCGTTGCTCATGCGGCACTGCA
TGTCGCCTAAGAGCCACGCAAACAGGGGTGAAGGCAAAGTGGAAGGTGCC
CCCGCTGATGAGGCTCCGCTACATGGGCGAGAAAGGATGGGGTGCCTACA
CCGTCGAGGCCATTCCGGCAGGAACATTTGTTGCAGGCTACACTGGAGAG
GTGCTGCCAGTACACGAAGCGAGAAGGAGGGTGCCCGTGTACGATCGGAA
GGGGTTGAACTACGTTTTGACAACTCAGGAGTTCTTCCAGGGGGTAAGTG
TTCACCGAACTTATGTGCGTTGGCGATCTCTTCCTATTGAAGACCTCGTC
TTGCTCAGTTGAGTATCTCGTTTTTCAACAATTGCTCGCTATCGGCACTT
TTGTCAGCACTCGGTTGTGGATAATTCTGTGCTTAATCCAATGATCTAGA
CGCGCTTCGAGATATGCGGGGGTGACAGCAATCCTCCACAGGACTCACGA
GGTCATAAGGCAGGATATGTAGTGGTCGCCGTCGCCTGTACCAGGGATTC
GTGCGTGTCATATGTAACATATGGCTTCTCTCCACATGCTGTCCTTGCGA
TGAAATGCTGTGGAATCCTTGGCGCAGGGAAAGCAGGTGTACCGTACAAT
CATCGACGCCACAACGTCCGGAAACGTGTCGAGGTTCTTCAATCACTGCT
GCGACCCCACCCTCACCGTCTTCGTGGTGAGAGAGGTTGAGAAATTGATT
CACGGTTGGCCTGGGGGCTTGTCTGTAAGCAGGCGAAAGCTCAGAATGTT
TTGATCATCGCGAGGAGGTCAGCAGGAGTTCCGTTGGTGTCCGATTGTTC
GGCTCATTGTCGATGCTCTATCCCGCTCCGTCCTTTGTCCCCTGTGTTCG
CCCTGAAGATTCGAAGAGGCTCATTCCTACGACCGCGTCTGGCTTTCTTC
ACACGGAACCGCGTGGAGGCAGGCTCTGAACTGACATACGACTACGGAGC
GACTGGCTCGGCGGGTGGAATTTTGCCACGAGGCAGCGATCAACAAAGCA
GTGTGCAGCCGCAGGAGCCGACTCGCAAGACACAACGAACAAGCGATGCC
GACAGCCACGTTGAGAGTAGGCCAAAGGGGGAATCTCCACATAGGAGCGG
AAAATTGTCCAGTGGTGACAATCTGTTGCAACTTGACGGAAACGACGACC
AGCGGCAGGCATGGGTAGCAGGCGGTCCAAGTAGCATCCGAGGTGACGAC
GCACGATCGCCGACTTTGCGGCGACCGTGTCTTTGCGGGTCGCGGCGCTG
TCGTGGTGTCCTTCCGTGTAACCGAGTGATACTATGAAAACATTGTGGAA
TCTTCTCGAGTGGAATATACAGCCAACGTGGTGGGGTTCAGCTGCGGTTG
GATGGAGCGCACGGATGCTCTTGGGGAGTTGATACCTCCGGAGATTGGCA
TCACATGACTGATCATCTGCGGAAGGTGCGCTGTGAGTGCAAACGATCAC
TTCGTAGAACTCGGCAATCTCTCACTGGAATCTGCGTAGGTTTGACATGG
ATAACTAGCGCACGAACGCATCGCGCATGACTGCAGTGCGCAGACCGTGT
GTTCGAGTACGTTGAGCTATCCACGCCTGACTGACCCCCTGTGCATGGCT
ATACACTCCTGTCGACGTGCATTCTGTTTTCATCTTCGAATCATCCTTCT
GGCGTGTCAAAATCTGCGATTGCGTGTTCGTGGCAGGCACGTGCCGTGCG
TGTAGTGTTGTGCGTTGCGTTTCTTCGGTACTTGTACGACAGACGTGGCC
CCGCTCAAGCGCCCTTCCACACTACACAGCCAAAACACGGCAACGAATAG
GGCGACGACAGCATAATCAATCAACAGCGCCAGCGCATGGTCAAAATTTC
TAAAGGAATGGCGGAATTTTTGGAGTATCAGGCCGTTGCTTACGGAGTGC
TTTTTTCAGTTTTTTTTTCAAATCCAACGTGAGAATCCAATTCAGCTTCT
ACTCAGGCTTCGTTTAAGTTTCATGCACGACCAGTGTAAATACCCTGAGG
TTGACAAACACCCCGTTTGCGCAAATATTGCATGTTTCGGTTGTGTGAAA
AATCGCCCTCGAACGGAAAGCGTGGCGAATATTGTGGGAGGAGAAGACCC
TGCAGATGCGCGTGCTCAGACTACAGTTTTACAACCTTCGGGGTACAGCG
CAGTGGTCGCTGGCGATGGCAGTCGGCTGATCAAGGATTGTTGACGTGCG
AGTGGTTGCGGGGACACGTCGCAATATTGGTGTGACCCCGTATTGCATGG
CGTGCGCGAGGGGGTGAACGATGGGAAGGGTTCTAGCGCTGTGAGATCTG
GAGGCGGAGAGGAGTACATAGAGGGCGGCGTGTATTGTGTTGTCGTGAGA
TATGAATCCGAATTATTGCGACGGAGAGATCCGAGTTATTGCGACAGAGA
GAAAGCAGCGTTGGGTTGGGCTCCACGCCAGTAGGAACGAAAGTTGTTCC
GACATTGACGGAGCTTTGCCATGATTTTTCGATGCATACGGTTGGCGGTG
TCAACGCGAGGGGATGGTTTTTGGCGGTGCGGTGTTAATAGATTATTACT
AAGAGATGTTGTCGACACGAGAGATATCCCTCGTAGTCATTGGTGTTCGT
CGAGCAGGGGAACCGTGTTGGGAAAATATGGCTCTGAGGCCGGTCGATGG
ATTTTTTCGAAACGCCGATGAAATTATATGGAAAGATCGCGTACCTACTA
GAAGATCCAAGATATGTTGGGGATATATGTTGACGTTGTTGTGGATTTTT
TTCTCTTTGCTAGACAGGAAGCGGCGACAAGCGGGTACATGCGATAGTTG
AAACGATAGGTATCGCATCGAGTTGTATATGAAGTGATTGATATTGAAGC
ATGTGCCGAGGCGGATGAAAATGTGCACATGATGCCGTTAGGCGAGATCG
TTGCTGACGGGTCTGGTCAGAGCATCATCCTTAAAGATCTACCTGACTGA
CAAGTTGCCCTGTGCCAGGAAGGCTGTTCTGTTCAGCACACACGATGTTT
TAGAAATTTCCCCTGCCGCCGAAGGAGAACGTCGCGCTGCACTGTTCGTG
TTTGTGCACTCAAGAATGAACGCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:831259..835232+

>mRNA_P-fluviatile_contig9.15089.1 ID=mRNA_P-fluviatile_contig9.15089.1|Name=mRNA_P-fluviatile_contig9.15089.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2490bp|location=Sequence derived from alignment at P-fluviatile_contig9:831259..835232+ (Porterinema fluviatile SAG_2381)
ATGACGCTCTTGGAGACGCTTAGTCACTCTGATACCACAACGATTCTCCT
TGATTATTTATCTCATTCCGAAATCGTCCACTTAGTCACGTGCACTCGAT
TGTTCGCGCTTTTGTCCGACGCGATGAGCAAACGGCGCGAAGACATTTCA
TGTGGAGACAGCCCCCATCCCGTACCGTGCGACTCGCTGCAACACGGAGA
CGAACCTTCTTCCGAATCATCTCGGCGTGGAAAATGGAGCCTCGGTGGAC
CCCTGCCGCCGAAATTCACGTTCCTGAATGAAGCGATCTATACTTTCGAA
GATTCCGGCGACCCACCCTTCGACGATCTCGAAGGATGTGCGTGTTTCGG
AGAGTGCGACGACGGCGATGAGGACAATATTGCCTCTTGCCCCTGTATCC
AGCTGAACGTAGCTGTGCAAAGATGACGCTCTTGGAGACGCTTAGTCACT
CTGATACCACAACGATTCTCCTTGATTATTTATCTCATTCCGAAATCGTC
CACTTAGTCACGTGCACTCGATTGTTCGCGCTTTTGTCCGACGCGATGAG
CAAACGGCGCGAAGACATTTCATGTGGAGACAGCCCCCATCCCGTACCGT
GCGACTCGCTGCAACACGGAGACGAACCTTCTTCCGAATCATCTCGGCGT
GGAAAATGGAGCCTCGGTGGACCCCTGCCGCCGAAATTCACGTTCCTGAA
TGAAGCGATCTATACTTTCGAAGATTCCGGCGACCCACCCTTCGACGATC
TCGAAGGATGTGCGTGTTTCGGAGAGTGCGACGACGGCGATGAGGACAAT
ATTGCCTCTTGCCCCTGTATCCAGCTGAACGTAGCTGTGCAAAGTGGCTC
TGCGCCGCTCTTTGAGTGCCACTCTCGTTGCTCATGCGGCACTGCATGTC
GCCTAAGAGCCACGCAAACAGGGGTGAAGGCAAAGTGGAAGGTGCCCCCG
CTGATGAGGCTCCGCTACATGGGCGAGAAAGGATGGGGTGCCTACACCGT
CGAGGCCATTCCGGCAGGAACATTTGTTGCAGGCTACACTGGAGAGGTGC
TGCCAGTACACGAAGCGAGAAGGAGGGTGCCCGTGTACGATCGGAAGGGG
TTGAACTACGTTTTGACAACTCAGGAGTTCTTCCAGGGGTGGCTCTGCGC
CGCTCTTTGAGTGCCACTCTCGTTGCTCATGCGGCACTGCATGTCGCCTA
AGAGCCACGCAAACAGGGGTGAAGGCAAAGTGGAAGGTGCCCCCGCTGAT
GAGGCTCCGCTACATGGGCGAGAAAGGATGGGGTGCCTACACCGTCGAGG
CCATTCCGGCAGGAACATTTGTTGCAGGCTACACTGGAGAGGTGCTGCCA
GTACACGAAGCGAGAAGGAGGGTGCCCGTGTACGATCGGAAGGGGTTGAA
CTACGTTTTGACAACTCAGGAGTTCTTCCAGGGGGGAAAGCAGGTGTACC
GTACAATCATCGACGCCACAACGTCCGGAAACGTGTCGAGGTTCTTCAAT
CACTGCTGCGACCCCACCCTCACCGTCTTCGTGGGAAAGCAGGTGTACCG
TACAATCATCGACGCCACAACGTCCGGAAACGTGTCGAGGTTCTTCAATC
ACTGCTGCGACCCCACCCTCACCGTCTTCGTGATTCGAAGAGGCTCATTC
CTACGACCGCGTCTGGCTTTCTTCACACGGAACCGCGTGGAGGCAGGCTC
TGAACTGACATACGACTACGGAGCGACTGGCTCGGCGGGTGGAATTTTGC
CACGAGGCAGCGATCAACAAAGCAGTGTGCAGCCGCAGGAGCCGACTCGC
AAGACACAACGAACAAGCGATGCCGACAGCCACGTTGAGAGTAGGCCAAA
GGGGGAATCTCCACATAGGAGCGGAAAATTGTCCAGTGGTGACAATCTGT
TGCAACTTGACGGAAACGACGACCAGCGGCAGGCATGGGTAGCAGGCGGT
CCAAGTAGCATCCGAGGTGACGACGCACGATCGCCGACTTTGCGGCGACC
GTGTCTTTGCGGGTCGCGGCGCTGTCGTGGTGTCCTTCCGTGTAACCGAG
TGATACTATGAATTCGAAGAGGCTCATTCCTACGACCGCGTCTGGCTTTC
TTCACACGGAACCGCGTGGAGGCAGGCTCTGAACTGACATACGACTACGG
AGCGACTGGCTCGGCGGGTGGAATTTTGCCACGAGGCAGCGATCAACAAA
GCAGTGTGCAGCCGCAGGAGCCGACTCGCAAGACACAACGAACAAGCGAT
GCCGACAGCCACGTTGAGAGTAGGCCAAAGGGGGAATCTCCACATAGGAG
CGGAAAATTGTCCAGTGGTGACAATCTGTTGCAACTTGACGGAAACGACG
ACCAGCGGCAGGCATGGGTAGCAGGCGGTCCAAGTAGCATCCGAGGTGAC
GACGCACGATCGCCGACTTTGCGGCGACCGTGTCTTTGCGGGTCGCGGCG
CTGTCGTGGTGTCCTTCCGTGTAACCGAGTGATACTATGA
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