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Homology
BLAST of mRNA_P-fluviatile_contig9.15073.1 vs. uniprot
Match: A0A6H5KUD7_9PHAE (GT31 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUD7_9PHAE) HSP 1 Score: 906 bits (2342), Expect = 0.000e+0 Identity = 480/738 (65.04%), Postives = 552/738 (74.80%), Query Frame = 1
Query: 1 PSDQTRPDAIAMKLAICILTRRSRWQRRHLLRQTWLQDEPYGVQVSHIFVMGEDRSYTQEENKDLAEEVKAHGDILIAPVEEASETKSAKTKHCIDWTTKSNDFDVLVKADDDSTLFLSRLFGSEGWLRPGAVRRDELVYFGKRHALARVANPALISFPPQTKEGSAWTDTIPPTGAALVAPDTGRLFEFDYRGIYWPEHMEGGMYGLSRALAEEIAKNNFRAYSSEEATVGVWVSAFGARALYLADGQALSGEADYLASNGTAVAASFGTCPLRLASMWCEYSRNGTLSSKSILPEDVRQALDCLGAYEQASNAPRSLPLGARDRHRMATLESLRRRWPITEGPSLGETGRWWAQMGGAFRGRPAAVVGTSAATIDRLPLYLLEGMHTLVMDDFFRVSERYTSWAPTMYMCVDPKICASSXXXXXXXXXXXREGRRGTATGAVESANRFARDVFAAFYILSGGPEGAEYWRYLRQRVNAHWFAAGSGSGXXXXXXXXXXXXXXXXXXXXXGGENLEAGLAENSPEIFSVSSQASGLAMSVEVLSFLGFSPIYVTAATEELGSRGAGTTAPQQWEEFSRAVSLARLAYGTTVTYLYADDEDKLPKARIIPFSGSDKRG----QAASELAAAGNLNGQEHILTWAERRSHARGEELANWDLDAFARNFPVVSRVDVVPGAASVDGMFPRSPRCRDADDLDRFQKAVICSVRISLKHFSSFLSWHVPYGPVRGVFVWLKR 2202
P +QTR A LAICILTRRS WQRRHLLRQTWLQD P GV+VSHIFVMGEDRSYT EEN LA E +AH DILIAPVEEA +T S +TKHCI WTT+ ++FD+LVKADDDSTLFLSRLFG GWL P AV R EL+YFGKRHALA+VANPA + PQ + T GA +T +FEFDYRG+YWPEHMEGGMYGLSR LAEEI KN+FR Y++EEATVGVWV+ F AR YLAD Q LS EADYLASNGTAVAASFGT LR A+MWCEY+ GTLS +SIL +D++Q LDCLG+YE++SN PRS PLGA + H+ ATLES+ RRWPI P+ ETGRWWA+MGGAFRG+PAA+VGTSA +DRLPLYLL+GMHTLVMDDFFRVSERYTSW PTMYMCVDP++CAS XXXXXXX + R G +VESANRFARDVFAAFY+LSGGPEGA+YW+YLRQRVN HWF AG+G G G G+A+ SPE F V SQ SGLAM VEVLS+LGFSPIYV AA EELG G Q+ +E SRAV LA YGT V YL ADDEDKLP R+ S G QAA+ A G L+ QE+I+ WA+ RS+A + A WDLD F ++FP VSR+ VV A++V+GMFP+SP CRDADDLDRFQKAV+C V+ SLKHFSSFL+WH+PYGPV+G FVW+KR
Sbjct: 41 PVEQTRTAAEVTNLAICILTRRSEWQRRHLLRQTWLQDVPDGVRVSHIFVMGEDRSYTAEENARLAAEAEAHRDILIAPVEEARDTASERTKHCIHWTTEHHEFDLLVKADDDSTLFLSRLFGRGGWLPPKAVDRGELLYFGKRHALAKVANPANV-LDPQADPSAGLTGG----GAIEEETETDGVFEFDYRGVYWPEHMEGGMYGLSRGLAEEIIKNDFRTYTNEEATVGVWVAVFDARVRYLADEQVLSREADYLASNGTAVAASFGTRRLRQAAMWCEYAPLGTLSPRSILAKDLQQTLDCLGSYERSSNPPRSQPLGAGEDHQAATLESISRRWPIMAPPNREETGRWWARMGGAFRGKPAAIVGTSATAVDRLPLYLLQGMHTLVMDDFFRVSERYTSWKPTMYMCVDPELCASRGXXXXXXXKKGQS-RSGAVANSVESANRFARDVFAAFYVLSGGPEGAQYWQYLRQRVNVHWFDAGAGGGSEQGGVRGGRVPGGATVA----GMGPAEGVADGSPENFRVLSQESGLAMGVEVLSYLGFSPIYVAAAKEELG----GAWGAQKLDECSRAVRLAGSMYGTRVVYLAADDEDKLPAGRVSATSARSGGGKVDAQAAARAGAEGKLSDQENIVAWAKTRSYA---QTARWDLDVFLQHFPAVSRLQVVRSASTVEGMFPKSPVCRDADDLDRFQKAVLCPVKKSLKHFSSFLTWHIPYGPVQGKFVWVKR 761
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | beta-1,3-galactosyltransferase 6 |
| Ec32 ortholog | Ec-14_005280.1 |
| Exons | 2 |
| Model size | 2205 |
| Cds size | 2205 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817312.7357974-CDS-P-fluviatile_contig9:692410..693961 | 1622817312.7357974-CDS-P-fluviatile_contig9:692410..693961 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig9 692411..693961 + |
| 1693572026.264312-CDS-P-fluviatile_contig9:692410..693961 | 1693572026.264312-CDS-P-fluviatile_contig9:692410..693961 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig9 692411..693961 + |
| 1622817312.7464342-CDS-P-fluviatile_contig9:693999..694653 | 1622817312.7464342-CDS-P-fluviatile_contig9:693999..694653 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig9 694000..694653 + |
| 1693572026.4578211-CDS-P-fluviatile_contig9:693999..694653 | 1693572026.4578211-CDS-P-fluviatile_contig9:693999..694653 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig9 694000..694653 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15073.1 >prot_P-fluviatile_contig9.15073.1 ID=prot_P-fluviatile_contig9.15073.1|Name=mRNA_P-fluviatile_contig9.15073.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=735bp
PSDQTRPDAIAMKLAICILTRRSRWQRRHLLRQTWLQDEPYGVQVSHIFV MGEDRSYTQEENKDLAEEVKAHGDILIAPVEEASETKSAKTKHCIDWTTK SNDFDVLVKADDDSTLFLSRLFGSEGWLRPGAVRRDELVYFGKRHALARV ANPALISFPPQTKEGSAWTDTIPPTGAALVAPDTGRLFEFDYRGIYWPEH MEGGMYGLSRALAEEIAKNNFRAYSSEEATVGVWVSAFGARALYLADGQA LSGEADYLASNGTAVAASFGTCPLRLASMWCEYSRNGTLSSKSILPEDVR QALDCLGAYEQASNAPRSLPLGARDRHRMATLESLRRRWPITEGPSLGET GRWWAQMGGAFRGRPAAVVGTSAATIDRLPLYLLEGMHTLVMDDFFRVSE RYTSWAPTMYMCVDPKICASSSGSSSGGGGGRREGRRGTATGAVESANRF ARDVFAAFYILSGGPEGAEYWRYLRQRVNAHWFAAGSGSGGGGTWRRLGG GGGEGGGRKRRGGENLEAGLAENSPEIFSVSSQASGLAMSVEVLSFLGFS PIYVTAATEELGSRGAGTTAPQQWEEFSRAVSLARLAYGTTVTYLYADDE DKLPKARIIPFSGSDKRGQAASELAAAGNLNGQEHILTWAERRSHARGEE LANWDLDAFARNFPVVSRVDVVPGAASVDGMFPRSPRCRDADDLDRFQKA VICSVRISLKHFSSFLSWHVPYGPVRGVFVWLKR* back to topmRNA from alignment at P-fluviatile_contig9:692411..694653+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig9.15073.1 ID=mRNA_P-fluviatile_contig9.15073.1|Name=mRNA_P-fluviatile_contig9.15073.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2243bp|location=Sequence derived from alignment at P-fluviatile_contig9:692411..694653+ (Porterinema fluviatile SAG_2381) CCCTCCGACCAGACACGACCGGACGCGATAGCAATGAAGTTGGCGATATG
CATCTTGACGCGAAGGAGCCGGTGGCAAAGGCGGCACCTCTTGCGGCAGA
CGTGGCTCCAGGACGAGCCGTACGGCGTGCAGGTGTCGCACATCTTCGTG
ATGGGGGAGGACCGCAGCTACACCCAGGAAGAGAACAAGGACCTGGCGGA
AGAGGTGAAGGCGCATGGGGATATCCTGATCGCCCCTGTGGAAGAGGCGA
GCGAGACGAAGTCCGCGAAGACGAAGCATTGCATCGACTGGACCACGAAG
AGCAACGACTTCGACGTCCTGGTCAAGGCCGACGACGACAGCACCCTATT
TTTGTCGCGTCTGTTCGGGAGCGAGGGCTGGCTCCGGCCCGGAGCGGTCC
GCCGCGACGAGCTCGTGTACTTCGGCAAGCGGCACGCGCTCGCCAGGGTC
GCAAACCCTGCACTTATTTCGTTTCCGCCTCAGACCAAAGAGGGCAGTGC
ATGGACAGACACGATACCCCCCACAGGGGCGGCGTTGGTGGCCCCGGACA
CGGGCAGACTTTTCGAGTTCGACTACCGAGGGATCTACTGGCCGGAGCAC
ATGGAGGGCGGGATGTACGGCCTGTCGCGGGCGCTGGCGGAAGAGATAGC
CAAGAACAACTTCCGCGCGTACTCAAGCGAGGAGGCCACCGTCGGGGTCT
GGGTGTCCGCGTTCGGGGCGAGGGCGCTGTACCTAGCGGACGGGCAGGCG
CTATCCGGTGAGGCGGACTACCTCGCCAGCAACGGCACCGCCGTCGCGGC
GTCCTTCGGCACCTGCCCCCTGCGCCTGGCGTCCATGTGGTGCGAGTACT
CCCGTAATGGTACCCTTTCCTCGAAGTCCATCCTGCCGGAGGACGTGCGG
CAGGCGCTCGACTGCCTCGGCGCGTACGAGCAGGCCTCGAACGCTCCCCG
CTCGCTTCCGCTCGGTGCCCGCGACCGACACCGCATGGCGACCCTCGAGT
CTCTCCGCCGCAGGTGGCCGATAACGGAGGGTCCCAGCCTGGGGGAAACC
GGCCGGTGGTGGGCGCAGATGGGTGGGGCTTTCAGGGGGAGGCCGGCGGC
TGTGGTGGGCACGTCGGCTGCCACTATCGACCGCCTGCCGCTGTACCTGC
TGGAGGGAATGCACACGCTGGTGATGGACGACTTCTTTCGAGTCTCGGAG
CGGTACACGTCGTGGGCGCCCACGATGTACATGTGCGTGGATCCCAAGAT
TTGTGCGTCGAGCAGCGGCAGCAGCAGCGGCGGCGGCGGCGGTAGGAGAG
AGGGCCGCAGAGGCACTGCTACTGGCGCCGTCGAGAGCGCGAATAGATTC
GCGAGGGACGTGTTTGCGGCGTTTTATATCTTGAGCGGCGGCCCTGAGGG
TGCGGAGTACTGGCGGTACTTACGGCAAAGGGTGAACGCGCACTGGTTTG
CGGCGGGGTCTGGGAGTGGGGGTGGTGGCACCTGGAGAAGATTGGGAGGA
GGAGGGGGAGAAGGAGGAGGAAGGAAAAGACGGGGAGGGGAAAACTTGGA
GGTATTGCTGGGATGAGTCCAGTACTGGAGGGACTGGAGGCGGGGCTGGC
CGAGAATTCCCCGGAGATTTTCAGCGTGTCATCTCAGGCGTCAGGACTTG
CCATGTCGGTTGAGGTGCTCTCGTTCCTTGGGTTTTCTCCGATCTACGTG
ACAGCGGCGACCGAGGAACTTGGCAGCAGGGGCGCGGGGACGACGGCTCC
GCAGCAGTGGGAAGAGTTTAGCAGAGCCGTCAGTCTGGCAAGGTTGGCCT
ACGGAACTACCGTCACTTACCTGTACGCCGATGACGAGGACAAGCTTCCC
AAGGCGCGGATCATCCCGTTTTCGGGGAGCGATAAGCGGGGTCAAGCGGC
CTCCGAGCTCGCGGCGGCGGGGAACCTCAACGGCCAGGAGCACATCTTGA
CTTGGGCTGAGAGGAGGAGCCACGCCCGCGGAGAGGAGTTGGCGAACTGG
GATCTTGACGCATTCGCGCGAAACTTTCCGGTCGTGAGCCGGGTCGATGT
CGTGCCCGGTGCCGCGAGCGTGGATGGCATGTTTCCGAGATCCCCGCGTT
GCCGGGATGCGGATGACCTTGACCGGTTCCAAAAGGCCGTCATTTGCTCA
GTCAGAATCTCGCTGAAGCATTTCTCGTCATTCCTTTCTTGGCACGTTCC
GTACGGGCCAGTGCGGGGTGTGTTTGTGTGGTTGAAGCGGTAG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig9:692411..694653+ >mRNA_P-fluviatile_contig9.15073.1 ID=mRNA_P-fluviatile_contig9.15073.1|Name=mRNA_P-fluviatile_contig9.15073.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4410bp|location=Sequence derived from alignment at P-fluviatile_contig9:692411..694653+ (Porterinema fluviatile SAG_2381) CCCTCCGACCAGACACGACCGGACGCGATAGCAATGAAGTTGGCGATATG CATCTTGACGCGAAGGAGCCGGTGGCAAAGGCGGCACCTCTTGCGGCAGA CGTGGCTCCAGGACGAGCCGTACGGCGTGCAGGTGTCGCACATCTTCGTG ATGGGGGAGGACCGCAGCTACACCCAGGAAGAGAACAAGGACCTGGCGGA AGAGGTGAAGGCGCATGGGGATATCCTGATCGCCCCTGTGGAAGAGGCGA GCGAGACGAAGTCCGCGAAGACGAAGCATTGCATCGACTGGACCACGAAG AGCAACGACTTCGACGTCCTGGTCAAGGCCGACGACGACAGCACCCTATT TTTGTCGCGTCTGTTCGGGAGCGAGGGCTGGCTCCGGCCCGGAGCGGTCC GCCGCGACGAGCTCGTGTACTTCGGCAAGCGGCACGCGCTCGCCAGGGTC GCAAACCCTGCACTTATTTCGTTTCCGCCTCAGACCAAAGAGGGCAGTGC ATGGACAGACACGATACCCCCCACAGGGGCGGCGTTGGTGGCCCCGGACA CGGGCAGACTTTTCGAGTTCGACTACCGAGGGATCTACTGGCCGGAGCAC ATGGAGGGCGGGATGTACGGCCTGTCGCGGGCGCTGGCGGAAGAGATAGC CAAGAACAACTTCCGCGCGTACTCAAGCGAGGAGGCCACCGTCGGGGTCT GGGTGTCCGCGTTCGGGGCGAGGGCGCTGTACCTAGCGGACGGGCAGGCG CTATCCGGTGAGGCGGACTACCTCGCCAGCAACGGCACCGCCGTCGCGGC GTCCTTCGGCACCTGCCCCCTGCGCCTGGCGTCCATGTGGTGCGAGTACT CCCGTAATGGTACCCTTTCCTCGAAGTCCATCCTGCCGGAGGACGTGCGG CAGGCGCTCGACTGCCTCGGCGCGTACGAGCAGGCCTCGAACGCTCCCCG CTCGCTTCCGCTCGGTGCCCGCGACCGACACCGCATGGCGACCCTCGAGT CTCTCCGCCGCAGGTGGCCGATAACGGAGGGTCCCAGCCTGGGGGAAACC GGCCGGTGGTGGGCGCAGATGGGTGGGGCTTTCAGGGGGAGGCCGGCGGC TGTGGTGGGCACGTCGGCTGCCACTATCGACCGCCTGCCGCTGTACCTGC TGGAGGGAATGCACACGCTGGTGATGGACGACTTCTTTCGAGTCTCGGAG CGGTACACGTCGTGGGCGCCCACGATGTACATGTGCGTGGATCCCAAGAT TTGTGCGTCGAGCAGCGGCAGCAGCAGCGGCGGCGGCGGCGGTAGGAGAG AGGGCCGCAGAGGCACTGCTACTGGCGCCGTCGAGAGCGCGAATAGATTC GCGAGGGACGTGTTTGCGGCGTTTTATATCTTGAGCGGCGGCCCTGAGGG TGCGGAGTACTGGCGGTACTTACGGCAAAGGGTGAACGCGCACTGGTTTG CGGCGGGGTCTGGGAGTGGGGGTGGTGGCACCTGGAGAAGATTGGGAGGA GGAGGGGGAGAAGGAGGAGGAAGGAAAAGACGGGGAGGGGAAAACTTGGA GCCCTCCGACCAGACACGACCGGACGCGATAGCAATGAAGTTGGCGATAT GCATCTTGACGCGAAGGAGCCGGTGGCAAAGGCGGCACCTCTTGCGGCAG ACGTGGCTCCAGGACGAGCCGTACGGCGTGCAGGTGTCGCACATCTTCGT GATGGGGGAGGACCGCAGCTACACCCAGGAAGAGAACAAGGACCTGGCGG AAGAGGTGAAGGCGCATGGGGATATCCTGATCGCCCCTGTGGAAGAGGCG AGCGAGACGAAGTCCGCGAAGACGAAGCATTGCATCGACTGGACCACGAA GAGCAACGACTTCGACGTCCTGGTCAAGGCCGACGACGACAGCACCCTAT TTTTGTCGCGTCTGTTCGGGAGCGAGGGCTGGCTCCGGCCCGGAGCGGTC CGCCGCGACGAGCTCGTGTACTTCGGCAAGCGGCACGCGCTCGCCAGGGT CGCAAACCCTGCACTTATTTCGTTTCCGCCTCAGACCAAAGAGGGCAGTG CATGGACAGACACGATACCCCCCACAGGGGCGGCGTTGGTGGCCCCGGAC ACGGGCAGACTTTTCGAGTTCGACTACCGAGGGATCTACTGGCCGGAGCA CATGGAGGGCGGGATGTACGGCCTGTCGCGGGCGCTGGCGGAAGAGATAG CCAAGAACAACTTCCGCGCGTACTCAAGCGAGGAGGCCACCGTCGGGGTC TGGGTGTCCGCGTTCGGGGCGAGGGCGCTGTACCTAGCGGACGGGCAGGC GCTATCCGGTGAGGCGGACTACCTCGCCAGCAACGGCACCGCCGTCGCGG CGTCCTTCGGCACCTGCCCCCTGCGCCTGGCGTCCATGTGGTGCGAGTAC TCCCGTAATGGTACCCTTTCCTCGAAGTCCATCCTGCCGGAGGACGTGCG GCAGGCGCTCGACTGCCTCGGCGCGTACGAGCAGGCCTCGAACGCTCCCC GCTCGCTTCCGCTCGGTGCCCGCGACCGACACCGCATGGCGACCCTCGAG TCTCTCCGCCGCAGGTGGCCGATAACGGAGGGTCCCAGCCTGGGGGAAAC CGGCCGGTGGTGGGCGCAGATGGGTGGGGCTTTCAGGGGGAGGCCGGCGG CTGTGGTGGGCACGTCGGCTGCCACTATCGACCGCCTGCCGCTGTACCTG CTGGAGGGAATGCACACGCTGGTGATGGACGACTTCTTTCGAGTCTCGGA GCGGTACACGTCGTGGGCGCCCACGATGTACATGTGCGTGGATCCCAAGA TTTGTGCGTCGAGCAGCGGCAGCAGCAGCGGCGGCGGCGGCGGTAGGAGA GAGGGCCGCAGAGGCACTGCTACTGGCGCCGTCGAGAGCGCGAATAGATT CGCGAGGGACGTGTTTGCGGCGTTTTATATCTTGAGCGGCGGCCCTGAGG GTGCGGAGTACTGGCGGTACTTACGGCAAAGGGTGAACGCGCACTGGTTT GCGGCGGGGTCTGGGAGTGGGGGTGGTGGCACCTGGAGAAGATTGGGAGG AGGAGGGGGAGAAGGAGGAGGAAGGAAAAGACGGGGAGGGGAAAACTTGG AGGCGGGGCTGGCCGAGAATTCCCCGGAGATTTTCAGCGTGTCATCTCAG GCGTCAGGACTTGCCATGTCGGTTGAGGTGCTCTCGTTCCTTGGGTTTTC TCCGATCTACGTGACAGCGGCGACCGAGGAACTTGGCAGCAGGGGCGCGG GGACGACGGCTCCGCAGCAGTGGGAAGAGTTTAGCAGAGCCGTCAGTCTG GCAAGGTTGGCCTACGGAACTACCGTCACTTACCTGTACGCCGATGACGA GGACAAGCTTCCCAAGGCGCGGATCATCCCGTTTTCGGGGAGCGATAAGC GGGGTCAAGCGGCCTCCGAGCTCGCGGCGGCGGGGAACCTCAACGGCCAG GAGCACATCTTGACTTGGGCTGAGAGGAGGAGCCACGCCCGCGGAGAGGA GTTGGCGAACTGGGATCTTGACGCATTCGCGCGAAACTTTCCGGTCGTGA GCCGGGTCGATGTCGTGCCCGGTGCCGCGAGCGTGGATGGCATGTTTCCG AGATCCCCGCGTTGCCGGGATGCGGATGACCTTGACCGGTTCCAAAAGGC CGTCATTTGCTCAGTCAGAATCTCGCTGAAGCATTTCTCGTCATTCCTTT CTTGGCACGTTCCGTACGGGCCAGTGCGGGGTGTGTTTGTGTGGTTGAAG CGGTAGGCGGGGCTGGCCGAGAATTCCCCGGAGATTTTCAGCGTGTCATC TCAGGCGTCAGGACTTGCCATGTCGGTTGAGGTGCTCTCGTTCCTTGGGT TTTCTCCGATCTACGTGACAGCGGCGACCGAGGAACTTGGCAGCAGGGGC GCGGGGACGACGGCTCCGCAGCAGTGGGAAGAGTTTAGCAGAGCCGTCAG TCTGGCAAGGTTGGCCTACGGAACTACCGTCACTTACCTGTACGCCGATG ACGAGGACAAGCTTCCCAAGGCGCGGATCATCCCGTTTTCGGGGAGCGAT AAGCGGGGTCAAGCGGCCTCCGAGCTCGCGGCGGCGGGGAACCTCAACGG CCAGGAGCACATCTTGACTTGGGCTGAGAGGAGGAGCCACGCCCGCGGAG AGGAGTTGGCGAACTGGGATCTTGACGCATTCGCGCGAAACTTTCCGGTC GTGAGCCGGGTCGATGTCGTGCCCGGTGCCGCGAGCGTGGATGGCATGTT TCCGAGATCCCCGCGTTGCCGGGATGCGGATGACCTTGACCGGTTCCAAA AGGCCGTCATTTGCTCAGTCAGAATCTCGCTGAAGCATTTCTCGTCATTC CTTTCTTGGCACGTTCCGTACGGGCCAGTGCGGGGTGTGTTTGTGTGGTT GAAGCGGTAG back to top
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