mRNA_P-fluviatile_contig9.15071.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: A0A6H5L9C1_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C1_9PHAE) HSP 1 Score: 184 bits (467), Expect = 2.640e-47 Identity = 99/142 (69.72%), Postives = 113/142 (79.58%), Query Frame = 3
Query: 495 ERSNALRPPLNLPETPPKLGRQPPRKGTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDPAITEQLRQLYARRDMVINDAFIGDDDSFEQVSNSPSGS 920
++SNA R PLNLP+TP KL RQPP KGT+RETLQDIARRVPV ++ YFNFSLR AA AM ISVTSLKRLCRRHGVKRWPHRQL+GLNR VSHLE + TS+DP I QL +LY RRD VI+ AF DD+S E + +PS S
Sbjct: 15 QQSNASRTPLNLPKTPRKLARQPPLKGTRRETLQDIARRVPVEVLLPYFNFSLRTAADAMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLEERQATSNDPDIARQLARLYCRRDEVIDLAFTSDDNSSE-LERAPSPS 155
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: D8LEC2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC2_ECTSI) HSP 1 Score: 150 bits (380), Expect = 2.820e-35 Identity = 78/140 (55.71%), Postives = 100/140 (71.43%), Query Frame = 3
Query: 492 RERSNALRPPLNLPETPPKLGRQPPRKGTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDP---AITEQLRQLYARRDMVINDAFIGDDDSFEQVS 902
R ++ L P L +P PPK+ R+ P KG KRETL DIA+R+PV ++R YFN+ LR AA AM ISVT+LKRLCRRHGVKRWPHRQ+ G+NR ++ LE QH T+ ++ +QLRQLY RRD++I AF DD+S S
Sbjct: 66 RSPADGLPPRLAIPHEPPKVPRRTPSKGNKRETLADIAKRIPVGLMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGDEVDSVADQLRQLYRRRDVIIELAFESDDESISNGS 205
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: A0A6H5K716_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K716_9PHAE) HSP 1 Score: 147 bits (371), Expect = 4.130e-34 Identity = 76/138 (55.07%), Postives = 99/138 (71.74%), Query Frame = 3
Query: 492 RERSNALRPPLNLPETPPKLGRQPPRKGTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDP---AITEQLRQLYARRDMVINDAFIGDDDSFEQ 896
R ++ L L +P PPK+ R+ P KG KRETL DIA+R+PV ++R YFN+ LR AA AM ISVT+LKRLCRRHGVKRWPHRQ+ G+NR ++ LE QH T+ ++ EQLRQL+ RRD++I AF DD+S +
Sbjct: 78 RSPADGLPHRLTIPHEPPKVPRRTPSKGNKRETLADIAKRIPVELMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGDEVDSVAEQLRQLHRRRDVIIELAFESDDESISK 215
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI) HSP 1 Score: 134 bits (336), Expect = 7.320e-32 Identity = 77/151 (50.99%), Postives = 104/151 (68.87%), Query Frame = 3
Query: 459 TRDIGDGVDDHRERSNALRPPLNLPETPPKLGRQPPRK----GTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDP----AITEQLRQLYARRDMVINDAFIGDDDS 887
+++ +G +D R A+R L +P+ PP L PPR G+KRE L DIA+R+PV ++REYFN+ LR +A AM ISVT+LKRLCRRHGVKRWPHRQ++GLNR + LE QH + A+ E+LRQL+ RR+++I AF DD+S
Sbjct: 19 SKNSNNGTED--SRGPAVRR-LRIPDEPPTL---PPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARGEEEIAAVEEELRQLHRRREVIIERAFESDDES 163
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: A0A6H5JLN8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN8_9PHAE) HSP 1 Score: 135 bits (341), Expect = 1.790e-29 Identity = 72/125 (57.60%), Postives = 94/125 (75.20%), Query Frame = 3
Query: 522 LNLPETPPKLGRQPPRKGTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQH----RTSSDPAI-----TEQLRQLYARRDMVINDAF 869
L +PETPP + R+PP KG KRETL DIA R+PV ++R YFN+ LR AA AM+ISVT+LKRLCRRHGVKRWPHRQ++G+NRA++HLE Q R +S+ I +EQ+++L RR ++I AF
Sbjct: 991 LFIPETPPVVPRRPPSKGNKRETLGDIALRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQDQAGRRNSEITIRNNQVSEQMQELLRRRQVMIEHAF 1115
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: A0A6H5KFL8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL8_9PHAE) HSP 1 Score: 134 bits (338), Expect = 2.220e-29 Identity = 77/158 (48.73%), Postives = 103/158 (65.19%), Query Frame = 3
Query: 438 RPGSGLVTRDIGDGVDDHRERSNALRPPLNLPETPPKLGRQPPRK----GTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDP----AITEQLRQLYARRDMVINDAFIGDDDS 887
+ G + +G +D R + L +P+ PP L PPR G+KRE L DIA+R+PV ++REYFN+ LR +A AM ISVT+LKRLCRRHGVKRWPHRQ++GLNRA+ LE QH + A+ E+LRQL+ RR+++I AF DD+S
Sbjct: 13 KSGRSAAKNNRNNGTEDRRGPALGR---LRIPDEPPTL---PPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRALGDLEAQHDAARGEEEIAAVEEELRQLHRRREVIIERAFESDDES 164
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: D8LNV2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV2_ECTSI) HSP 1 Score: 129 bits (323), Expect = 2.320e-27 Identity = 64/98 (65.31%), Postives = 79/98 (80.61%), Query Frame = 3
Query: 492 RERSNALRPPLNLPETPPKLGRQPPRKGTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQ 785
R+ S R L +PETPP + R+PP KG KRETL DIA R+PV ++R YFN+ LR AA AM+ISVT+LKRLCRRHGVKRWPHRQ++G+NRA++HLE Q
Sbjct: 757 RDASGLTR--LFIPETPPVVPRRPPSKGNKRETLGDIAHRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQ 852
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: D8LCC6_ECTSI (Riboflavin kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC6_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.260e-22 Identity = 67/122 (54.92%), Postives = 74/122 (60.66%), Query Frame = 3
Query: 495 ERSNALRPPLNLPETPPKLGRQPPRKGTKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDPAITEQLRQLYARRDMVIN 860
++SNA R PLNLP+TP KL RQPP K AM ISVTSLKRLCRRHGVKRWPHRQL+GLNR VSHLE + TSSDP I QL +LY RRD VI+
Sbjct: 15 QQSNASRTPLNLPKTPRKLARQPPLK--------------------------------AMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLEERQATSSDPDIARQLARLYCRRDEVID 104
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.330e-15 Identity = 40/104 (38.46%), Postives = 70/104 (67.31%), Query Frame = 3
Query: 576 TKRETLQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSDPAITEQLRQ----LYARRDMVINDAFIG 875
+KR+T +++A+R+PV ++ E+++ L AA +S+S+T LK+LCR++G+KRWPHRQ++ LN+++ LE + +SD LR L +R+++I A G
Sbjct: 1 SKRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEKILGASDDKAAAALRAKAGPLRTKRELIIKTASAG 104
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Match: A0A835Z500_9STRA (RWP-RK domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z500_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 1.260e-9 Identity = 39/100 (39.00%), Postives = 60/100 (60.00%), Query Frame = 3
Query: 591 LQDIARRVPVPIIREYFNFSLRDAAHAMSISVTSLKRLCRRHGVKRWPHRQLNGLNRAVSHLEVQHRTSSD---------PAITEQLRQLYARRDMVIND 863
+ DIAR + +R F+ L+ AA +++SVT++KRLCRR+ + RWPHRQL G++ + LE Q RT+ A EQ++QLY R +I++
Sbjct: 1 MDDIARNISASQLRSMFHLPLKVAARELNVSVTTMKRLCRRYKIPRWPHRQLKGIDARIYMLEQQIRTAMTGEHGGADKAQAAQEQIQQLYRNRAQLIDE 100 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15071.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15071.1 >prot_P-fluviatile_contig9.15071.1 ID=prot_P-fluviatile_contig9.15071.1|Name=mRNA_P-fluviatile_contig9.15071.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=472bp MLSRPGSGLVTRDIGDGVDDHRERSNALRPPLNLPETPPKLGRQPPRKGTback to top mRNA from alignment at P-fluviatile_contig9:667535..674143- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15071.1 ID=mRNA_P-fluviatile_contig9.15071.1|Name=mRNA_P-fluviatile_contig9.15071.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6609bp|location=Sequence derived from alignment at P-fluviatile_contig9:667535..674143- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:667535..674143- >mRNA_P-fluviatile_contig9.15071.1 ID=mRNA_P-fluviatile_contig9.15071.1|Name=mRNA_P-fluviatile_contig9.15071.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2832bp|location=Sequence derived from alignment at P-fluviatile_contig9:667535..674143- (Porterinema fluviatile SAG_2381)back to top |