mRNA_P-fluviatile_contig9.15050.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15050.1
Unique NamemRNA_P-fluviatile_contig9.15050.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: D8LUA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LUA5_ECTSI)

HSP 1 Score: 506 bits (1303), Expect = 4.740e-180
Identity = 247/289 (85.47%), Postives = 271/289 (93.77%), Query Frame = 1
Query:    1 MILTTEQSKSRADLMSSSLGGDYQPAMANSKSFGLLRVRRTIMDSYNETVRSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPFGW 867
            M +TT+Q+ SRADL+S+SLGG+Y PA   SKS  +L++RRT+MDSYNETVRSAPKIGFGTAGR PLQ+GGA+APGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQ+EPGPGHYK+AIVNPQE+NAPKY+F KDAGA  RE+ VRAPGPG+YNLHPGVGKQVLSTKRS+ GVGFG GNRPDL+VQSTA+VGPGEYSIPGSTGERQVDSR+CNKSGAKFSKA RMGKP + EDVAPGPGNYRLPPGICG+GAASPYPSAPAATLSGREKFGSPFGW
Sbjct:    1 MAMTTQQN-SRADLVSNSLGGEYLPAATKSKSSDILKMRRTLMDSYNETVRSAPKIGFGTAGRPPLQDGGAEAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQLEPGPGHYKLAIVNPQEENAPKYTFPKDAGAMIRENVVRAPGPGRYNLHPGVGKQVLSTKRSHNGVGFGTGNRPDLLVQSTADVGPGEYSIPGSTGERQVDSRRCNKSGAKFSKAVRMGKPGSLEDVAPGPGNYRLPPGICGQGAASPYPSAPAATLSGREKFGSPFGW 288          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: A0A835YVV8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVV8_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.480e-77
Identity = 138/272 (50.74%), Postives = 171/272 (62.87%), Query Frame = 1
Query:  106 LRVRRTIMDSYNETVRSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIA-IVNPQEDNAPKYSFSKDAGAAKRESAVR--APGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKA---PRMGK------PVNP------EDVA--PGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            +++ RT++DSYN TV  AP++GFGTA R  L +GG D PGPGAY +KSTMF NP S  RSPP F++RGREKFGSPDLKA DR  QMEPGP  YKI  I   ++   P YSF + + A       R  +PGPG Y L   VGKQVLSTKRS+ G  FG G RP L+  ST ++GPG+Y IPG+ G +QVDSRK     ++F+K    P++ K      P  P      +D A  PG G Y +P  +  R   S + S P A +SGREKFGSPF
Sbjct:    1 MKMGRTVIDSYNATVPMAPRVGFGTADRPALLDGGDDVPGPGAYAIKSTMFKNPRSCFRSPPCFSIRGREKFGSPDLKACDRATQMEPGPAAYKIPHIAGSEQRQPPAYSFPRSSWAKSDAVTARDISPGPGTYALPAAVGKQVLSTKRSHSGPAFGTGGRPPLISVSTDDIGPGDYEIPGNLGTKQVDSRKTTHQASRFAKPGGPPKVKKGGHGAHPQTPAESHAEDDFAHVPGAGAYNIPSTLV-RNPCSMFRSPPVARMSGREKFGSPF 271          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: A0A8J2SYT1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SYT1_9STRA)

HSP 1 Score: 209 bits (532), Expect = 2.080e-63
Identity = 124/263 (47.15%), Postives = 164/263 (62.36%), Query Frame = 1
Query:   91 KSFGLLRVRRTIMDSYNETVRSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVN-PSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLM-VQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPR-MGKPVNPED---VAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            KS GL     +I+DS+N T +++P   FG+A R  L +     PG GAY +K+T+  N P S I S P F++R REKFG P L+A+D     EPGPG Y    +NP +DN PKYSF K  G   ++ A  +PGPG Y +   VG+QVLSTK +  G+GFG G RP L+ VQ+  +VGPGEY +  S   +QVDSRK      KFS++ R     +  +D     PGPG Y+LP G+CG G++ P+ +AP A+LSGREKFGSPF
Sbjct:    3 KSLGL---DHSIIDSFNATKKTSPSYQFGSAIRPRLSDA-EPTPGAGAYSIKTTILGNVPDSRIVSTPQFSLRSREKFGDPMLRALDAGTASEPGPGWYTPKQINPNDDNPPKYSFPK--GHFIKDKARFSPGPGAYAIPSSVGRQVLSTKSNNNGMGFGQGERPPLLRVQN--DVGPGEYGVGISACRKQVDSRKKTSGFVKFSRSARDKTSSMTMQDELQARPGPGTYQLPSGLCGSGSSYPFRAAPRASLSGREKFGSPF 257          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: F0YJJ1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJJ1_AURAN)

HSP 1 Score: 178 bits (452), Expect = 4.650e-50
Identity = 102/219 (46.58%), Postives = 134/219 (61.19%), Query Frame = 1
Query:  163 KIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVN-PSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPR----MGKPVNPEDVAPGPGNYRLPPGICGRGAASP 804
            ++ FG+A R  L E     PG GAY +K+T+  N P S I S P F++R REKFG+P L+A+D     +PGPG Y    VNP++DNAPKYSF K  G   ++ A  +PGPG Y +   VGKQVLSTK +  G+GFG G RP L+     +VGPGEY +  S  ++QVDSRK      KFS+  R         + E+  PGPG Y+LPPG+CG G++ P
Sbjct:   92 RVSFGSAIRPRLSEA-EPTPGAGAYSIKTTILGNVPDSKIHSAPQFSLRSREKFGNPMLRALDTETARQPGPGWYTPKQVNPKDDNAPKYSFPK--GHFIKDKARLSPGPGAYVIPSSVGKQVLSTKSNNNGMGFGQGERPPLLRVHN-DVGPGEYGVGISACKKQVDSRKKTSGFVKFSRCARDKATSTSAKDEEEALPGPGTYQLPPGLCGGGSSYP 306          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: A0A8K1CPW0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPW0_PYTOL)

HSP 1 Score: 126 bits (317), Expect = 3.720e-31
Identity = 89/255 (34.90%), Postives = 130/255 (50.98%), Query Frame = 1
Query:  100 GLLRVRRTIMDSYNETVRSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            G   V+ ++    +    +AP   FG++ R P    G+ +PGPGAYQ+ S++     S + + P+ ++ GREKFGS  D+K    T    PGPG Y   IVNP+E +APKYS  K     +     + PGPG+Y     +G+ VLST++      F    R  L   STA+VGPG+Y +  +   +Q  S   + +   F    R        +V PGP +Y+ P    G+   S Y +AP  ++SGR KFGS F
Sbjct:   29 GFNDVKSSVGGQVDSRKVTAPTTVFGSSTR-PQTSSGSKSPGPGAYQIPSSIGKPILSTMNAAPACSISGREKFGSTSDMK----TAANSPGPGDYTSTIVNPRERSAPKYSLGKKW--TQLSGMKKFPGPGEYEAPTTIGRTVLSTQKQNPMPAFPRVERKPLAATSTADVGPGQYGVVVAAVGKQPLSTLTSAAAFSFGNEQRSKLAKTGVEV-PGPASYQ-PKSSVGKQVESTYRTAPKISMSGRTKFGSHF 274          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: F0WEQ1_9STRA (Uncharacterized protein AlNc14C76G5101 n=2 Tax=Albugo TaxID=65356 RepID=F0WEQ1_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.440e-30
Identity = 85/238 (35.71%), Postives = 123/238 (51.68%), Query Frame = 1
Query:  154 SAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAID-RTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPEDVA-PGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            +AP   FG++ R P     A +PGPG+YQ+ ST+     S ++  PS ++ GR+KFGS    AID +     PGPG Y   +VN +E NAPK+S  K   ++  +S  + PGPG Y     +G   LST++S     F  G R  L   +T +VGPG+Y +  ++  +Q  S     +   F    R  KP   + +   G G Y       G+ + S YPS+P  ++SGR KFGS F
Sbjct:   44 TAPYTVFGSSPR-PKPSNDAKSPGPGSYQIPSTLGKAVLSTVQQAPSCSLSGRDKFGS----AIDVKNAASSPGPGDYTSKVVNLREQNAPKFSLGKKWNSSA-DSNKKGPGPGAYETANCIGPTFLSTQKSNPASAFPRGERTSLTQNNTPDVGPGQYGVVLTSVGKQTISTLSTPASFSFGTQERS-KPSKSKALDNAGQGRYYSARSSVGKQSESIYPSSPGISMSGRTKFGSHF 274          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: W7T5U8_9STRA (Flagellar associated protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T5U8_9STRA)

HSP 1 Score: 117 bits (292), Expect = 7.850e-28
Identity = 83/213 (38.97%), Postives = 112/213 (52.58%), Query Frame = 1
Query:  124 IMDSYNETVRSAPKIGFGTAGRQPL--QEGGADAPGPGAYQLKSTMFVNPS-SMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIA-------IVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNR---------PDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKA 705
            I+ SY     + P  GFG++ R  +     G D PGPGAY LKST+  + + S IRS   F++RGRE FGS  +   DR C  EPGPG Y  +       + NP+   AP++SF K  G + R      PGPG Y+    +G QVLS++ S     FG G +         PDL   +++  GPG Y+   + G +QVDSRK N  G +F KA
Sbjct:   24 IITSYKGIFPATPSFGFGSSPRDTIAPSHSGNDTPGPGAYNLKSTLSGHVADSRIRSTNGFSLRGREGFGS-KIFTKDRACVDEPGPGAYLSSQSRKGGLLSNPKHRAAPQFSFPK--GCSPRNKLSIQPGPGHYHFKDTLGPQVLSSRASPPVSTFGKGRKRQSFTSDLTPDL---TSSGGGPGFYNAVSACG-KQVDSRKRNGGGVRFGKA 229          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: A0A6G0XD37_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD37_9STRA)

HSP 1 Score: 115 bits (288), Expect = 9.270e-27
Identity = 84/255 (32.94%), Postives = 117/255 (45.88%), Query Frame = 1
Query:  112 VRRTIMDSYNETVRSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSPDLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGV--GKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPE---DVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            ++ +  +  +   R+AP   FGT+ R      G  +PGPGAYQ+ +T+     S IRS P+ ++ GREKFGS     +  +C   PGPG Y   IVNP E NAP++S  K       +S+ ++PGPG Y+    +   + VLST +      F   NR                        +QV S   N +   FS   R   PV      D +P P  Y+    + G    S Y SAP  ++SGR KFGS F
Sbjct:   42 IKSSCGEQVDSRKRTAPTTCFGTSSRPKDPGDGNKSPGPGAYQVPTTIGKPVVSTIRSAPACSISGREKFGSTSDLKLAASC---PGPGDYTPHIVNPNERNAPQFSLGKKWTKGIVDSSAKSPGPGAYDTPESLLNTRTVLSTSKHATASSFPKDNRXXXXXXXXXXXXXXXXXXXNVAVGKQVVSTVTNSAAYSFSVVGRSKAPVGARMSHDASPAPNAYKHKDAV-GTQVLSTYKSAPKCSMSGRTKFGSHF 292          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: K3WN56_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WN56_GLOUD)

HSP 1 Score: 115 bits (287), Expect = 9.680e-27
Identity = 85/255 (33.33%), Postives = 125/255 (49.02%), Query Frame = 1
Query:  100 GLLRVRRTIMDSYNETVRSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            G + ++ +  +  +    +AP   FG++ R P    G  +PGPGAYQ+ S++     S +   P+ ++ GREKFGS  D K    T    PGPG Y   IVNP+E  AP+YS  K  G        ++PGPG Y     +G+  LST++S     F    R  L   +T +VGPG+Y++  +   +Q  S   + +   F    R        D  PGP +Y     + G+   S Y +AP  ++SGR KFGS F
Sbjct:   33 GYVDIKSSCGEQVDSRKATAPVTVFGSSTR-PHTTSGNKSPGPGAYQIPSSIGKPVLSTMMQAPACSISGREKFGSTGDAKLSGST----PGPGDYTSEIVNPRERAAPRYSLGKKWG--NLSEMKKSPGPGSYESSTTLGRTFLSTQKSNPMPAFTKVERKPLTSGNT-DVGPGQYAVVVAAVGKQPISTLSSAASYSFGTELRTKVSRGTVDAVPGPNSYPSKSSV-GKQVESTYRTAPKCSMSGRTKFGSHF 278          
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Match: H3H517_PHYRM (Uncharacterized protein n=8 Tax=Peronosporaceae TaxID=4777 RepID=H3H517_PHYRM)

HSP 1 Score: 114 bits (286), Expect = 1.190e-26
Identity = 92/251 (36.65%), Postives = 120/251 (47.81%), Query Frame = 1
Query:  124 IMDSYNETVRS----APKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFTMRGREKFGSP-DLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAGAAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQSTAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPEDVAPGPGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPF 861
            I  S  E V S    AP   FG+ G +P    GA +PGPGAYQ+ S++     S +   PS ++ GREKFGS  DLK+  +     PGPG Y  AIVNP+E  AP YS  K       +         +    P +G+ VLST++S     F    R  L   STA+VGPG+YS+      RQ  S   + +   F    R     +  D  PGP  Y     + G    S Y +AP  ++SGR KFGS F
Sbjct:   30 IKSSCGEQVDSRKVTAPVTVFGS-GTRPRTTSGAKSPGPGAYQIPSSIGKPVLSTMVQAPSCSISGREKFGSTADLKSSAKF----PGPGDYTTAIVNPRERAAPSYSLGKKWSPMTGQKXXXXXXXXETT--PTIGRTVLSTQKSNPMSSFPKVERKPLRNASTADVGPGQYSVVVEAVGRQAVSTLTSAAAYSFGTESRSKTGRSTADGVPGPNMYDHKSSV-GWQVESTYRTAPKCSMSGRTKFGSHF 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15050.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LUA5_ECTSI4.740e-18085.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVV8_9STRA4.480e-7750.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2SYT1_9STRA2.080e-6347.15Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YJJ1_AURAN4.650e-5046.58Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A8K1CPW0_PYTOL3.720e-3134.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
F0WEQ1_9STRA1.440e-3035.71Uncharacterized protein AlNc14C76G5101 n=2 Tax=Alb... [more]
W7T5U8_9STRA7.850e-2838.97Flagellar associated protein n=1 Tax=Nannochlorops... [more]
A0A6G0XD37_9STRA9.270e-2732.94Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3WN56_GLOUD9.680e-2733.33Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
H3H517_PHYRM1.190e-2636.65Uncharacterized protein n=8 Tax=Peronosporaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:472238..476903 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score509.2
Seed ortholog evalue1.3e-141
Seed eggNOG ortholog2880.D8LUA5
EggNOG free text desc.Sperm-tail PG-rich repeat
EggNOG OGs2CN1A@1,2QT9S@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-14_004280.1
Exons9
Model size870
Cds size870
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817309.8072758-CDS-P-fluviatile_contig9:472237..4722901622817309.8072758-CDS-P-fluviatile_contig9:472237..472290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 472238..472290 +
1693572013.3077908-CDS-P-fluviatile_contig9:472237..4722901693572013.3077908-CDS-P-fluviatile_contig9:472237..472290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 472238..472290 +
1622817309.8183603-CDS-P-fluviatile_contig9:472603..4727151622817309.8183603-CDS-P-fluviatile_contig9:472603..472715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 472604..472715 +
1693572013.3189209-CDS-P-fluviatile_contig9:472603..4727151693572013.3189209-CDS-P-fluviatile_contig9:472603..472715Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 472604..472715 +
1622817309.8291326-CDS-P-fluviatile_contig9:473314..4734031622817309.8291326-CDS-P-fluviatile_contig9:473314..473403Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 473315..473403 +
1693572013.4947703-CDS-P-fluviatile_contig9:473314..4734031693572013.4947703-CDS-P-fluviatile_contig9:473314..473403Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 473315..473403 +
1622817309.8416605-CDS-P-fluviatile_contig9:473902..4739871622817309.8416605-CDS-P-fluviatile_contig9:473902..473987Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 473903..473987 +
1693572013.5085387-CDS-P-fluviatile_contig9:473902..4739871693572013.5085387-CDS-P-fluviatile_contig9:473902..473987Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 473903..473987 +
1622817309.852251-CDS-P-fluviatile_contig9:474568..4746551622817309.852251-CDS-P-fluviatile_contig9:474568..474655Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 474569..474655 +
1693572013.525587-CDS-P-fluviatile_contig9:474568..4746551693572013.525587-CDS-P-fluviatile_contig9:474568..474655Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 474569..474655 +
1622817309.8619838-CDS-P-fluviatile_contig9:475083..4751821622817309.8619838-CDS-P-fluviatile_contig9:475083..475182Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 475084..475182 +
1693572013.5403073-CDS-P-fluviatile_contig9:475083..4751821693572013.5403073-CDS-P-fluviatile_contig9:475083..475182Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 475084..475182 +
1622817309.8728569-CDS-P-fluviatile_contig9:475770..4759021622817309.8728569-CDS-P-fluviatile_contig9:475770..475902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 475771..475902 +
1693572013.550031-CDS-P-fluviatile_contig9:475770..4759021693572013.550031-CDS-P-fluviatile_contig9:475770..475902Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 475771..475902 +
1622817309.8853042-CDS-P-fluviatile_contig9:476287..4763711622817309.8853042-CDS-P-fluviatile_contig9:476287..476371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 476288..476371 +
1693572013.7146134-CDS-P-fluviatile_contig9:476287..4763711693572013.7146134-CDS-P-fluviatile_contig9:476287..476371Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 476288..476371 +
1622817309.898921-CDS-P-fluviatile_contig9:476774..4769031622817309.898921-CDS-P-fluviatile_contig9:476774..476903Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 476775..476903 +
1693572013.7266402-CDS-P-fluviatile_contig9:476774..4769031693572013.7266402-CDS-P-fluviatile_contig9:476774..476903Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 476775..476903 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15050.1prot_P-fluviatile_contig9.15050.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 472238..476903 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15050.1

>prot_P-fluviatile_contig9.15050.1 ID=prot_P-fluviatile_contig9.15050.1|Name=mRNA_P-fluviatile_contig9.15050.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=290bp
MILTTEQSKSRADLMSSSLGGDYQPAMANSKSFGLLRVRRTIMDSYNETV
RSAPKIGFGTAGRQPLQEGGADAPGPGAYQLKSTMFVNPSSMIRSPPSFT
MRGREKFGSPDLKAIDRTCQMEPGPGHYKIAIVNPQEDNAPKYSFSKDAG
AAKRESAVRAPGPGQYNLHPGVGKQVLSTKRSYYGVGFGMGNRPDLMVQS
TAEVGPGEYSIPGSTGERQVDSRKCNKSGAKFSKAPRMGKPVNPEDVAPG
PGNYRLPPGICGRGAASPYPSAPAATLSGREKFGSPFGW*
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mRNA from alignment at P-fluviatile_contig9:472238..476903+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15050.1 ID=mRNA_P-fluviatile_contig9.15050.1|Name=mRNA_P-fluviatile_contig9.15050.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4666bp|location=Sequence derived from alignment at P-fluviatile_contig9:472238..476903+ (Porterinema fluviatile SAG_2381)
ATGATTTTGACAACCGAGCAGAGCAAGAGCCGGGCGGATCTCATGTCTAG CAGGTGATCAAACACAGAACGGGAGTGTCGGTTGATCCGCCTTATCCCTC GATGGTAGTGAGCGGTGGCTTCGATCATCCTTGATCAACTCGTGCGGTGT GATTCTGTTCGGTACGTCCGGTTGGTGACCACGGCGTAAAAGGTTGTCTG GCACTGTTAGCTCCCCTAGTTGGGGAGTACACCATTTTGACTTCCGTTCG ACGTTTGGTGAACAGCTGTGATGTGTTGAAGTGATCGACTGCTGCGTTGG GGCTGAGAAATTTACCAAGAAGAGGACTTTCCGATGTCGCTTCCGTTCGC GCGCTGTTGTCGGCAGCCTTGGCGGCGACTACCAGCCCGCGATGGCGAAT TCTAAGTCGTTCGGCTTGCTGCGAGTGCGACGAACAATTATGGATAGCTA CAATGAGACGGTCCGGAGCGCTCCGAAGGTACAACAGAGACGAGCTTAAC ATACAACTTTCAACGGCTGCTTCTTTCAGTTGTATACGCCTCGCGGGACG CTGCCGGCGTTCTTGCGCGGGCGATACACTTGTGTGTTGCTCGTTTTGTG CGGCATTAGTTTGCTCATCTTGAGGGAATGCACCTTTCGTCGAGGAAGTC ATCAAGGTTCTCCATTTCATGGCTTGTTTCCTACCGGCGGCTGCCTTTTT TTTTATTCGGAAAACATACTGGAGTACGTTCGCAGTTGAATTACTTTTTT TGAAATCATTTCGCTTCAAGTCTGTTTATGGTACCGCCGACATCATTTCT GCGTATTCGGCGGTTCATAGACTCTTAAGGAGTATCGGCAATGTAAATGG TAAGGTTTGATGGGTACGACGGGATCCTTGCCCCTCCTTCGTGTACAGCA TACGCAACTTTGAGACAATTAAAAGCGCCCCGGGTCGGTTTCCGTGCGAA GACTGCTTCTCTCGAACTTTGTATCAAGCACAGATTAGGCACTCGACCAT CAATCAAGTACCATGCGCACGACAGGCATTTGTTTCAAACGGGGCCGCGT TTCCTGTTGCACGTAATGCGTGTCCAGATCGGGTTTGGCACGGCTGGACG CCAACCTCTACAGGAAGGAGGGGCCGACGCCCCAGGGCCAGGGGCATATC AACTGAAATCGACAATGTGAGCGAGAAGGGCTGTCGCGAAGAAGCGAGGC TGCACACCAACCCAAAGAGTCAAGCTCTTTCCTCCCTTCATCATTAGAAA AGGATGGATCGACAGGGTGTGTTATTATCTGCGGTTTTCGGACGCATTGT GCAATTGTTTCCGTCCGCCGGACGCATTGTGCAATTGTTTAACGAGACGT TCGATTCTGTGTGGAGCTTTTGGATGCAACGCTCCCTCTGTACTGATGCA ACTGCTTACGAGCGCCTATCGTAGACACAACGCAACGTGTTGCGACCTTC AAGGGTGATGATTCATGTCGTTGGCCACAACAATGGTTCAGGCTATTGCA ATAGCCTCGATGTTTAGACAGGGAATGCTTCAGGAATTCCTCTGCAGCAA GATATCTTGCGCAGTGTTTCTTCGTGTTCATGCTCGAACATCACTTGTTA ATTACCTCCCAGGCAAGCAATCAATTCTTTCCACCCTCTTTCTCGCGCAA TCGATTACGAATTAGGTTTGTAAACCCCAGCAGCATGATCCGATCTCCCC CTAGTTTCACCATGCGAGGGCGTGAGAAGTTCGGATCTCCCGATTTGAAA GTGAGTGTTTAAGTGCCAGAAAGAACATGCCCGATCTAGAGCCCCTGCTA CTCATTTGGACGAGATTTCAAAGGCAGAACAAAATACCTGCTTCTTGTTT GTCGAGCCCTGAAGTTCAAAATTACGATAACACTAGGTGCTCTGAGCCCA GCGAGAGTCAAGTTGGTGCAGAATCGCATATCAAAGCGCAATGGTGTTCC ATAACAGTTCACGCACATTTGTTCGCGCTACGTATACCTCGTGGAAGCCT GGTACTCTGCGAGTGTTGAGTGTCGGCTGCAACCGAACACTGCCAGCTTC CTCTCGGACGATTACTGTGGGTGTAAAACCGACGGGTGCTCTGATTGCGC GAAATTGGTTCAATTTTCTCCACTTTGGCTGTCTCTTTGCATTTGGACAA CGGAGCTGGTGAACAGGGGGGGAAGCCTATCCCAGGTGTAGCGTAGGTCT ATAGCATGGTGGTGTGTCATACTCTAGTAGCGCGGGTACATCATCGCGAG GAACGTGCGCGAGCTGTTAAATCGAATGCGTTCGACATCACTCAATTCTG ATATCGGGAATATGACGCGCCATCGGGACAGGCCATCGACCGCACATGCC AGATGGAACCAGGACCCGGGCACTACAAGATCGCGATTGTCAACCCTCAG GAGGACAATGCCCCGAAGGTAAGGGGGCTAAAACGACGTTGACTAGGCGG AGGAACGCGGGTGGAAAAGAATGTCATCATGTTGTGAGTTCAAACAAAAG TGGTTTTCATGAGGTAGGCTTAACACGTTCTCAGCCAAGATACAGCTGCG GTCGGCAGAGAGACACCCAGCACTTCCCGGCCCTAAACCCGTCTCCTCTC GTGGGTTTTGTCGGTGCGCTTGAGCACCCCTGCACGGTTAACGCGCGTTT GTCCTCGTGCTTTCGTAAGCTTTCATGATCGGAGGGTTTTCGATGGCAGC GGGGTTGTCCAAGGATGCCTGATTGCTTGTCCTTTTTCGTGGCCAGTGTC TATGTAACGTTTCACTCTGCTGCTTGCTCGTTTTCAAAGTCATGCTTTGC ATGTGCACCACTCCTACGTGTGCTGCATGCCGTCCCCGCGATACAGTATT CGTTTTCGAAGGACGCCGGCGCAGCGAAACGAGAAAGTGCTGTCCGTGCG CCTGGGCCCGGCCAATACAACTTGCATCCAGGAGTAGGGAAGCAGGTGGG AAAGGTTTTCCGCGAATTTCTCTCGGGTGGGAGGGGGATGATTTACATGC GCTAGCTTATCCGTACTTTTTCTTTGATCTCTAGAAACCGTGCGGGAGGG AGAGCAAGAGAGATCGAGAAAATGCATCCCAAGTGCAGGACACAAGTGTC CATGTAAAAAAAATGTCGCCTGCTTTGCCGCAGTGGTAGCAGACGACTGA ATTGGCTTTACCAGCTCCTAGAAATCAAGACTCCCTGCGCTGCGAACGTC CAATTGTCTCAGATAAGACAGAGATACACACTGAGCTTCATGGGAGCAGT TACCGGCATATTGAAAGGGCACTAAGATAAGGCGCAACCGCGATAATGCG GCTGTCGGTTGTTGGGAAATGACCTGCGACGAGAAAATTGGTTGACGAAA CAAGTCGACGCGGGTTCCTGATCGGCCTCGCAATCGACTTTGCCGGAACG CCCTACAAAACTGTGCTGTTTTACATCCCTTTCCTTCACATGCTCGTCGA CTGTTGTGTATTGCCGAGAAATGCGACGGATGCACCCCCGTATGCGATGG CGACGGCTGCTGCTGCCCTGAAAATGTAACAAGGTTTTGTCGACCAAGCG GAGTTATTACGGCGTGGGCTTTGGGATGGGAAACCGACCAGATTTGATGG TGCAGAGCACCGCCGAAGTTGGCCCTGGAGAATACTCCATCCCAGGCTCA ACCGGTGAACGCCAGGTATGAAGGAGAATCGATTCATCTTTTTCGCACGT GAATACGTTGATCGGACGCTAGTTTGCCAGACTCGAGCCTTGTTTCAGAA CCTAGCCCTTGAACACGCATGCTTATCATAATTGAACCAGCAGCGCTCAC ATAACGTGCTTGCTCCGAACGAAATGCACACGCCGGTCTTCATGGAGCGC TTTGTGTGTCGGTTAACGGCTTCAGAACCAGCCTGCGTAGCACGTTGTTG GGAGAAAAGCAACAACCCACTCAGTCTTCTGATAAATGGCGGATAAACGT TCTCCCTGTCTCTTTCTTTGTGCTTGCCCCGTCCTGCCCACCCGCCTCGT CCATCCGATGGTTCAAACAAACGACGTAAATCTTCACACTCTATGCCAAG GTCGACTCGAGAAAATGCAACAAAAGCGGGGCAAAGTTTTCCAAGGCCCC GCGGATGGGGAAGCCTGTCAACCCGGAAGACGTGGTGAGAGACTGCCCCG TCTAAGCCACTCGGTTTCAAAGAGCGATTGCACTGCATCAAACTACACCT GTCTACACCGTCATAGTATCCGGCCGCGGCAATGGGCAAGCACGATCGAC CCCGCCCCCTATCCCCGTCAACGCCGAATGCAACCACCGGCAAACAGAGC GCATCGAGTACGCCGCGACTAAAGTATCCAACCTGTGCAAACTCAAATCT CAGCATTCCTTTTCAGATTCCACCGCGGGCTTGCTGCACTAGTCCACGCG CTGAACATCACTGCCTATTCATAACTCTTGTCGTCTTCCCTCCTTCCGTA GTTCCATTCTCTGTCTGTGCGATGGATCCCATCGAGAATGGTGCCTTTTA AAGAAAAACATTAATGCTTCCGTCGCTTTACTTGCAGGCGCCCGGACCGG GAAATTATCGGCTGCCTCCGGGCATTTGCGGGCGGGGCGCGGCGTCGCCC TACCCTTCCGCGCCCGCGGCCACCTTGAGCGGAAGAGAAAAGTTCGGATC CCCGTTCGGGTGGTGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:472238..476903+

>mRNA_P-fluviatile_contig9.15050.1 ID=mRNA_P-fluviatile_contig9.15050.1|Name=mRNA_P-fluviatile_contig9.15050.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1740bp|location=Sequence derived from alignment at P-fluviatile_contig9:472238..476903+ (Porterinema fluviatile SAG_2381)
ATGATTTTGACAACCGAGCAGAGCAAGAGCCGGGCGGATCTCATGTCTAG
CAGATGATTTTGACAACCGAGCAGAGCAAGAGCCGGGCGGATCTCATGTC
TAGCAGCCTTGGCGGCGACTACCAGCCCGCGATGGCGAATTCTAAGTCGT
TCGGCTTGCTGCGAGTGCGACGAACAATTATGGATAGCTACAATGAGACG
GTCCGGAGCGCTCCGAAGCCTTGGCGGCGACTACCAGCCCGCGATGGCGA
ATTCTAAGTCGTTCGGCTTGCTGCGAGTGCGACGAACAATTATGGATAGC
TACAATGAGACGGTCCGGAGCGCTCCGAAGATCGGGTTTGGCACGGCTGG
ACGCCAACCTCTACAGGAAGGAGGGGCCGACGCCCCAGGGCCAGGGGCAT
ATCAACTGAAATCGACAATATCGGGTTTGGCACGGCTGGACGCCAACCTC
TACAGGAAGGAGGGGCCGACGCCCCAGGGCCAGGGGCATATCAACTGAAA
TCGACAATGTTTGTAAACCCCAGCAGCATGATCCGATCTCCCCCTAGTTT
CACCATGCGAGGGCGTGAGAAGTTCGGATCTCCCGATTTGAAAGTTTGTA
AACCCCAGCAGCATGATCCGATCTCCCCCTAGTTTCACCATGCGAGGGCG
TGAGAAGTTCGGATCTCCCGATTTGAAAGCCATCGACCGCACATGCCAGA
TGGAACCAGGACCCGGGCACTACAAGATCGCGATTGTCAACCCTCAGGAG
GACAATGCCCCGAAGGCCATCGACCGCACATGCCAGATGGAACCAGGACC
CGGGCACTACAAGATCGCGATTGTCAACCCTCAGGAGGACAATGCCCCGA
AGTATTCGTTTTCGAAGGACGCCGGCGCAGCGAAACGAGAAAGTGCTGTC
CGTGCGCCTGGGCCCGGCCAATACAACTTGCATCCAGGAGTAGGGAAGCA
GTATTCGTTTTCGAAGGACGCCGGCGCAGCGAAACGAGAAAGTGCTGTCC
GTGCGCCTGGGCCCGGCCAATACAACTTGCATCCAGGAGTAGGGAAGCAG
GTTTTGTCGACCAAGCGGAGTTATTACGGCGTGGGCTTTGGGATGGGAAA
CCGACCAGATTTGATGGTGCAGAGCACCGCCGAAGTTGGCCCTGGAGAAT
ACTCCATCCCAGGCTCAACCGGTGAACGCCAGGTTTTGTCGACCAAGCGG
AGTTATTACGGCGTGGGCTTTGGGATGGGAAACCGACCAGATTTGATGGT
GCAGAGCACCGCCGAAGTTGGCCCTGGAGAATACTCCATCCCAGGCTCAA
CCGGTGAACGCCAGGTCGACTCGAGAAAATGCAACAAAAGCGGGGCAAAG
TTTTCCAAGGCCCCGCGGATGGGGAAGCCTGTCAACCCGGAAGACGTGGT
CGACTCGAGAAAATGCAACAAAAGCGGGGCAAAGTTTTCCAAGGCCCCGC
GGATGGGGAAGCCTGTCAACCCGGAAGACGTGGCGCCCGGACCGGGAAAT
TATCGGCTGCCTCCGGGCATTTGCGGGCGGGGCGCGGCGTCGCCCTACCC
TTCCGCGCCCGCGGCCACCTTGAGCGGAAGAGAAAAGTTCGGATCCCCGT
TCGGGTGGTGAGCGCCCGGACCGGGAAATTATCGGCTGCCTCCGGGCATT
TGCGGGCGGGGCGCGGCGTCGCCCTACCCTTCCGCGCCCGCGGCCACCTT
GAGCGGAAGAGAAAAGTTCGGATCCCCGTTCGGGTGGTGA
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