mRNA_P-fluviatile_contig9.15040.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig9.15040.1 vs. uniprot
Match: D7G201_ECTSI (Sel1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G201_ECTSI) HSP 1 Score: 874 bits (2259), Expect = 1.420e-305 Identity = 547/802 (68.20%), Postives = 602/802 (75.06%), Query Frame = 1
Query: 1 SRLMSVTSAALSRVKGMKIRSGSTGRVLTPRSVTMVSGYFFPSRQNGSSAVSRDHGEKTDDRHSNHGSESKSSSSNFMNVGQTGSIDDAFGTHSPKGARKGGSGDGGG---NEQKLSVLFGDDEESDCEPRSDG----ESTATNDR--ATSCSKWTSTLMASTLARGEA-GKPSFCGGVDLVPRPSEAGNKVEYLIMVCKAAQKYASAQVPRLSRVRDGQHMINQLRDVASDLGRQAEKILAVYDTREVRQSADRLGETLSKVYDLLGDVEGTSIMFGRKRGFGKRVSALVHDIGTRANALLAATSLAIANRPNVLYASDNGERGTPAPQQEALLKMCIKGDKFFFGRGEKPNMAKAFEAYSWAAERGCAEAMHMTAWMYRVGNSGVEADAEKCQLWLERAVEKGYAPAMNDLAATLLGEADRIERAHPELKTDVASADAGASTGRRLDSGDDDDSELAANDKDDND-GTGA-----PRGNSDGGEEDGMGTKR------------------DGSXXAEGGVGRLGEDSSPLPPELAQLFEQVMDKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGFPEDARSWYSLAALPSESANNPRAQNCLGALFYEGRGVTRDLAEAVKWFRLSARQGFPQACQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSITATNNLAYLLARDALHTLAAAARQAPSASSHCRDHPFRVVGTGLQFEDPSNGFMKAAELSSRASSKLWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGLPLDPVAAFENFLSAADGEAAHPTA 2304
SRL+S TSAAL+RVKGM +RSG++GRVL PRSVT+VSG PSR G V D ++T + E +S + G + A P G DGGG N+QKLSVLF DDEES+ E ++ ST+TND AT SKW +TLMASTLAR +A GK VDL+P P EA NK+EYL+MVCKAAQ YAS Q RLSRVRDGQHMINQLRDVASDLGRQAEK+LAVYDTREVR SADRLGETL VYDLLGDVEGT+IMFGRKRGFGKRV+ALVHDIGTRANALLAATSLAIA+RPNVLY +D G PAPQQ+ LLKMCI+GDKFFFGRGE PNM+KAFEAY+WAAERGCAEAM+M AWMYRVG+ V+ADAE+CQ WLERAV+KGYAPAMNDLA TLL +ADR ERAHPELK DVA+AD +A + DD D G GA P ++ GG E+ DG E ED+S LPPELAQLFEQVM+KRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMG+ EDARSWYSLAA PSESANNPRAQN LG LFYEGRGVT+D EAVKWFRLSARQGFPQAC XXXXXXXXXXXXXXXXXXXXXXXXXXX GSI+ATN+LAYLLARDALH LAAAARQAP R+ V GTGLQFEDPS G MK A LSS+ASSK WRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLG+PL+PVA+FENFL+AADGE HPTA
Sbjct: 77 SRLLSATSAALTRVKGMTLRSGTSGRVLNPRSVTLVSGLLSPSR--GKKGVDNDGADRTSE-------EDRSRKDRPFSQGHVENDKSAPWVQDP-----GQDDDGGGTKSNKQKLSVLF-DDEESNAENGTEEGASIPSTSTNDSNAATPRSKWAATLMASTLAREKATGKAMVRNRVDLLPHPREAANKIEYLVMVCKAAQAYASTQAARLSRVRDGQHMINQLRDVASDLGRQAEKMLAVYDTREVRNSADRLGETLKGVYDLLGDVEGTAIMFGRKRGFGKRVTALVHDIGTRANALLAATSLAIADRPNVLYMADTGGGEPPAPQQQELLKMCIEGDKFFFGRGENPNMSKAFEAYAWAAERGCAEAMYMMAWMYRVGSGSVDADAEQCQRWLERAVDKGYAPAMNDLATTLLEQADRTERAHPELKADVAAADV-----------------IADSPTDDADRGLGATRPPTPDDHTSGGSEEXXXXXXXXXXXXXXXXXXXXXXXXDGGRQVE-----AEEDASSLPPELAQLFEQVMEKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGYFEDARSWYSLAAHPSESANNPRAQNYLGTLFYEGRGVTKDRDEAVKWFRLSARQGFPQACXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGSISATNSLAYLLARDALHALAAAARQAPPGLDQ-RNLSAGVAGTGLQFEDPSRGIMKPAGLSSQASSKAWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGIPLEPVASFENFLAAADGEVVHPTA 840
BLAST of mRNA_P-fluviatile_contig9.15040.1 vs. uniprot
Match: A0A836CC33_9STRA (MYND-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC33_9STRA) HSP 1 Score: 392 bits (1007), Expect = 3.320e-115 Identity = 276/705 (39.15%), Postives = 353/705 (50.07%), Query Frame = 1
Query: 430 SKWTSTLMASTLARGEAGKPSFCGGVDL---------VPRPSEAGNKVEYLIMVCKAAQKYASAQVPRLSRVRDGQHMINQLRDVASDLGRQAEKILAVYDTREVRQSADRLGETLSKVYDLLGDVEGTSIMFGRKRGFGKRVSALVHDIGTRANALLAATSLAIANRPNVLYASDNGERGTPAPQQEALLKMCIKGDKFFFGRGEKPNMAKAFEAYSWAAERGCAEAMHMTAWMYRVGNSGVEADAEKCQLWLERAVEKGYAPAMNDLAATLLGEADRIERAHPELKTDVASADAGASTGRRLDSGDDDDSELAANDKDDNDGTGAPRGNSDGGEEDGMGTKRDGSXXAEGGVGRLGED-SSPLPPELAQLFEQVMDKRKRSMQLLQ-------------------------DAAKTGHTEAMTNLGNMQEAMGFPEDARSWYSLAALPSES-ANNPRAQNCLGALFYEGRGVTRDLAEAVKWFRLSARQGFPQACQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------------------GSITATNNLAYLLARDALHTLAAAARQAPSASSHCRDHPFRVVGT-------GLQFEDPSNGFMKAAELSSRAS---------------------SKLWRESTAQLREAADLFRRAADSGIGDASYQLGRLYQQGLGLPLDPVAAF 2256
S+W TL+ ST + G +PR + GNKV++L+ VCK+ + YA +L VR G +I LRD +DL RQ +KILAVYDT EVR+SADRLG TL+ V+++L DVE + MFGRK+GFGKRV ALV ++GT AN+LLAATSLAIA+RP +LY D + P + E L++ C++GD++++GR PN KA AY WAAERG EA +M AWMY+ G+ V ADAE+C WLERAVE+GYAPAMN+LA LL EA+ I A PE++ A+ D AS D+ D RD A +G L PE A F + RKR+ LLQ AA+ GH +AM +LG++ E G AR WY LAA P + ANN RAQN LG +++ GRG RD EA +WF+ +A+QG AC GS +A NLAYLLAR+ALH L A Q P R G G+QFEDP G M++ E S+ AS + + RE T QL EAA+LFRRAAD+G DASYQLGRLY+QGLG+P+DP+AAF
Sbjct: 289 SRWAQTLLLSTTSSAFKGXXXXXXXXXXXXXXXXXATMPREEDVGNKVDFLVAVCKSTEVYAKQLEAKLGTVRSGVALIEGLRDTHADLKRQRDKILAVYDTLEVRRSADRLGTTLTHVFEVLSDVERAARMFGRKKGFGKRVQALVQELGTNANSLLAATSLAIADRPQMLYMVDADDGAPPKHKLEELIQRCLEGDRWYYGREGPPNFEKAHAAYLWAAERGFGEAQYMLAWMYKHGHF-VTADAERCTHWLERAVERGYAPAMNELALLLLEEAEGISAAWPEVQ---AAFDELASKAADADAAGDXXXXXXXXXXXXXXXXXXXX------XXXXXXXARDVRGSAAAALGATQRRLQRTLSPEAAAKFAAAAELRKRAQSLLQRVRLCVRREVRCVRQLCAAAVPAAVSAARLGHADAMASLGSLLEEAGRVRAARRWYELAAAPGDGGANNARAQNFLGRMYHSGRGAARDPREAARWFKRAAKQGLAAACNNLGLCYEAGAGVQKVGAGKRKVCRRFADTSPFCMDAATGAARASAHDTSKAIELYRQGVEGGSASACGNLAYLLAREALHALGCLAGQGT---------PLRGDGGALQWGRGGMQFEDPQRGAMESPEASAAASQCTLARCVSPLDVPLETTMSAADVRREMTRQLLEAAELFRRAADAGSADASYQLGRLYEQGLGMPVDPMAAF 974
BLAST of mRNA_P-fluviatile_contig9.15040.1 vs. uniprot
Match: A0A7W9DCQ0_9BURK (Uncharacterized protein n=2 Tax=unclassified Janthinobacterium TaxID=2610881 RepID=A0A7W9DCQ0_9BURK) HSP 1 Score: 59.3 bits (142), Expect = 4.420e-6 Identity = 41/117 (35.04%), Postives = 57/117 (48.72%), Query Frame = 1
Query: 1450 AEGGVGRLGEDSSPLPP-ELAQLFEQVMDKRKRSMQLLQDAAKTGHTEAMTNLGNMQEAMGFPEDARSWYSLAALPSESANNPRAQNCLGALFYEGRGVTRDLAEAVKWFRLSARQG 1797
AE V R E P+ ELA +++ ++R ++QL + AA+ G TEA LG M P A WY AA + +A LG L G GVT+D EA +W +S+ G
Sbjct: 45 AERRVRRWAESGLPVAERELALVYQPRAERRDEALQLFEQAARAGDTEAAFELGQMLR-QSQPGQAWLWYRQAA----EQQHAKAALMLGLLAANGEGVTKDQTEAARWLAVSSELG 156 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15040.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig9.15040.1 >prot_P-fluviatile_contig9.15040.1 ID=prot_P-fluviatile_contig9.15040.1|Name=mRNA_P-fluviatile_contig9.15040.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=768bp MSVTSAALSRVKGMKIRSGSTGRVLTPRSVTMVSGYFFPSRQNGSSAVSRback to top mRNA from alignment at P-fluviatile_contig9:360055..365871+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig9.15040.1 ID=mRNA_P-fluviatile_contig9.15040.1|Name=mRNA_P-fluviatile_contig9.15040.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5817bp|location=Sequence derived from alignment at P-fluviatile_contig9:360055..365871+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig9:360055..365871+ >mRNA_P-fluviatile_contig9.15040.1 ID=mRNA_P-fluviatile_contig9.15040.1|Name=mRNA_P-fluviatile_contig9.15040.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4608bp|location=Sequence derived from alignment at P-fluviatile_contig9:360055..365871+ (Porterinema fluviatile SAG_2381)back to top |