mRNA_P-fluviatile_contig9.15027.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15027.1
Unique NamemRNA_P-fluviatile_contig9.15027.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15027.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:246710..248851 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-00_009920.1
Exons3
Model size1190
Cds size1188
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15027.1prot_P-fluviatile_contig9.15027.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 246710..248849 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817306.7120168-CDS-P-fluviatile_contig9:246709..2472281622817306.7120168-CDS-P-fluviatile_contig9:246709..247228Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 246710..247228 +
1693572007.5635936-CDS-P-fluviatile_contig9:246709..2472281693572007.5635936-CDS-P-fluviatile_contig9:246709..247228Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 246710..247228 +
1622817306.7244363-CDS-P-fluviatile_contig9:247716..2479291622817306.7244363-CDS-P-fluviatile_contig9:247716..247929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 247717..247929 +
1693572007.5751555-CDS-P-fluviatile_contig9:247716..2479291693572007.5751555-CDS-P-fluviatile_contig9:247716..247929Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 247717..247929 +
1622817306.7350621-CDS-P-fluviatile_contig9:248393..2488491622817306.7350621-CDS-P-fluviatile_contig9:248393..248849Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 248394..248849 +
1693572007.585765-CDS-P-fluviatile_contig9:248393..2488491693572007.585765-CDS-P-fluviatile_contig9:248393..248849Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 248394..248849 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15027.1

>prot_P-fluviatile_contig9.15027.1 ID=prot_P-fluviatile_contig9.15027.1|Name=mRNA_P-fluviatile_contig9.15027.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=396bp
RKGGNRGGGHHRRKRGGDRERAPPKVAASTAAGTGSMSGGGVGAAGGGGG
DSDEQLVHRFKEWLKEPDVPSWAVEIQTNFDKDPNVARYMRQIRHLFANR
NERAGSQEQHHQNHQHHEAAGRGGTTDFADALMQPVGMPDSSAAALVGGD
STMGMSSWGGGLGAGEVESSLNQARLFEDNATAVLSSPPGSAISAPGLPP
AGVHMGVAAPMVRSLLNEMGRDSGTGGGQPFPDYPQEHFAGNQQFHINYQ
QHHQQNQDFNQQQPNFMYSSQPHQQQQQQQQQQHFPDIGTSGSRSMPDMG
VPGLDNNSNKNDSSHFSKVMRGGSGPGSWGPFSSNTAFSTPASEPSSIAA
SGGGSRGGALGGVLDGSGRRQENSQGGYFSVSGGGGGGGGEFPADR
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mRNA from alignment at P-fluviatile_contig9:246710..248851+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15027.1 ID=mRNA_P-fluviatile_contig9.15027.1|Name=mRNA_P-fluviatile_contig9.15027.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2142bp|location=Sequence derived from alignment at P-fluviatile_contig9:246710..248851+ (Porterinema fluviatile SAG_2381)
AGGAAGGGTGGCAACCGCGGTGGTGGGCATCATCGGCGCAAGAGAGGTGG
AGATCGAGAGCGTGCACCGCCGAAGGTGGCAGCAAGCACTGCTGCAGGCA
CTGGAAGCATGAGCGGCGGAGGCGTAGGGGCGGCGGGCGGCGGAGGTGGC
GATAGCGATGAGCAGCTCGTCCACAGGTTCAAAGAATGGTTGAAGGAGCC
GGACGTTCCGTCGTGGGCAGTCGAGATCCAGACGAATTTCGACAAGGACC
CGAACGTGGCCAGGTACATGCGCCAGATTCGCCACTTGTTCGCGAACCGC
AACGAGCGAGCGGGCTCCCAGGAGCAGCACCACCAGAACCACCAGCATCA
CGAAGCAGCGGGCAGGGGAGGGACAACTGATTTTGCCGACGCCCTCATGC
AACCAGTAGGCATGCCTGATTCCTCCGCAGCCGCTCTTGTCGGAGGCGAT
TCGACGATGGGAATGTCGTCTTGGGGGGGAGGGCTGGGAGCTGGCGAGGT
GGAGAGTTCCCTTAACCAGGCGCGTGCCCTTTCTTCTGACTAAGAATTGG
ATGTTTGCCGGAGGGGGGGCGGTTTGTTTCGCTGCAGGTGTGCTTTGGCT
TCAGACAGGTGGTCAATGCTGCGGTATTCTGTTTGCATCATGGATTGTAA
AATTGTCGAGAGCACCTGAAAAAGGTGTCCTACGGTGCGCACCACGGTCG
TGCACGCGTAACTCCCGCAGAAACATAGTGCGGCTTGTGTCGATGGACGA
TTTTTCGACAGTGTTGACACGTCTCCCGTCTCCCCGTCTCCCGTCTTCGG
TTATCAACTACTTCGCAATCGCCAAGGCGTCCCCCTTGAGCTGCAGTCCG
TTTTCCGCCGCGGTATCCTTTGCACACCCCTCCAACCTATCAAACGACGA
CCCACGTACCGCGACCTCAATGCCCGTCTGAAACGAAGTCAGCGTGAGCC
TTCTCTTTTCTCGTTGGCCCGCCGAACGGCTTGCTTGCCCTTTGCGTGTG
CGTGCAGGCGAGATTATTCGAGGACAACGCGACGGCCGTCCTCAGCAGCC
CACCAGGTAGCGCCATCAGCGCGCCCGGCCTCCCCCCAGCCGGCGTACAC
ATGGGGGTCGCAGCGCCGATGGTGCGTTCCCTGCTCAACGAAATGGGCAG
GGACAGCGGCACCGGCGGCGGTCAACCGTTCCCGGACTATCCTCAGGAGC
ATTTTGCTGGGAACCAACAGGTGATTTCTTCAGCCGCGTGGCCCGTTGTG
GTCGATCAGCTACTCCGCGACGCGCGTTGCGTAACGTGGAACGTTTTCAT
CCCATTTCGGAATACACCAGGATTTGAGTGCGGCGAACGTAACAGACTTG
GTTGCGCAAGCGATTTGTTGTTATGGATCTTGTTTTCCCCAATGTGCGCT
TCCGTTTGTAGCTTAGTGTTGCTTTTCATAGCATGTGTCCGTAAGCTTGG
AATCACTTTTTGTATATTACGTACACGTCCCCGGCAGGTGAACCAGGGGA
AGGGGGGTTATGCTGTCATTTCCTTTTTCAGCATTGCTGACACTGACTTG
CTCACAGCATGCCTCGGTCAACTATACGAACTACTGTTGAGTGTCGTGCC
GTGCCTCGACAATCCAGTTATATGTACATGAAAATTGTCATTGCTGATTT
TCGCCGCTGCCAACCCTCCGCCCCACAACTCTAGTTTCATATAAATTACC
AGCAACACCACCAGCAGAATCAGGACTTCAACCAGCAGCAGCCTAATTTC
ATGTACTCGTCCCAGCCACATCAGCAGCAGCAGCAGCAGCAGCAGCAGCA
GCACTTTCCGGATATCGGCACCTCTGGAAGCCGATCGATGCCAGACATGG
GCGTGCCGGGCTTAGACAACAACAGCAACAAAAACGACAGTAGCCATTTC
TCAAAGGTCATGCGCGGAGGCAGTGGACCCGGGTCCTGGGGGCCGTTCAG
CAGCAACACCGCCTTTTCCACTCCCGCCTCGGAGCCCTCTTCCATCGCCG
CCAGCGGCGGCGGCAGTCGAGGCGGCGCACTGGGCGGCGTGCTGGATGGG
TCGGGACGTCGGCAAGAAAATAGCCAGGGGGGATATTTTTCCGTGTCGGG
CGGCGGCGGCGGCGGCGGCGGCGAGTTTCCGGCCGATCGCAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:246710..248851+

>mRNA_P-fluviatile_contig9.15027.1 ID=mRNA_P-fluviatile_contig9.15027.1|Name=mRNA_P-fluviatile_contig9.15027.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2376bp|location=Sequence derived from alignment at P-fluviatile_contig9:246710..248851+ (Porterinema fluviatile SAG_2381)
AGGAAGGGTGGCAACCGCGGTGGTGGGCATCATCGGCGCAAGAGAGGTGG
AGATCGAGAGCGTGCACCGCCGAAGGTGGCAGCAAGCACTGCTGCAGGCA
CTGGAAGCATGAGCGGCGGAGGCGTAGGGGCGGCGGGCGGCGGAGGTGGC
GATAGCGATGAGCAGCTCGTCCACAGGTTCAAAGAATGGTTGAAGGAGCC
GGACGTTCCGTCGTGGGCAGTCGAGATCCAGACGAATTTCGACAAGGACC
CGAACGTGGCCAGGTACATGCGCCAGATTCGCCACTTGTTCGCGAACCGC
AACGAGCGAGCGGGCTCCCAGGAGCAGCACCACCAGAACCACCAGCATCA
CGAAGCAGCGGGCAGGGGAGGGACAACTGATTTTGCCGACGCCCTCATGC
AACCAGTAGGCATGCCTGATTCCTCCGCAGCCGCTCTTGTCGGAGGCGAT
TCGACGATGGGAATGTCGTCTTGGGGGGGAGGGCTGGGAGCTGGCGAGGT
GGAGAGTTCCCTTAACCAGAGGAAGGGTGGCAACCGCGGTGGTGGGCATC
ATCGGCGCAAGAGAGGTGGAGATCGAGAGCGTGCACCGCCGAAGGTGGCA
GCAAGCACTGCTGCAGGCACTGGAAGCATGAGCGGCGGAGGCGTAGGGGC
GGCGGGCGGCGGAGGTGGCGATAGCGATGAGCAGCTCGTCCACAGGTTCA
AAGAATGGTTGAAGGAGCCGGACGTTCCGTCGTGGGCAGTCGAGATCCAG
ACGAATTTCGACAAGGACCCGAACGTGGCCAGGTACATGCGCCAGATTCG
CCACTTGTTCGCGAACCGCAACGAGCGAGCGGGCTCCCAGGAGCAGCACC
ACCAGAACCACCAGCATCACGAAGCAGCGGGCAGGGGAGGGACAACTGAT
TTTGCCGACGCCCTCATGCAACCAGTAGGCATGCCTGATTCCTCCGCAGC
CGCTCTTGTCGGAGGCGATTCGACGATGGGAATGTCGTCTTGGGGGGGAG
GGCTGGGAGCTGGCGAGGTGGAGAGTTCCCTTAACCAGGCGAGATTATTC
GAGGACAACGCGACGGCCGTCCTCAGCAGCCCACCAGGTAGCGCCATCAG
CGCGCCCGGCCTCCCCCCAGCCGGCGTACACATGGGGGTCGCAGCGCCGA
TGGTGCGTTCCCTGCTCAACGAAATGGGCAGGGACAGCGGCACCGGCGGC
GGTCAACCGTTCCCGGACTATCCTCAGGAGCATTTTGCTGGGAACCAACA
GGCGAGATTATTCGAGGACAACGCGACGGCCGTCCTCAGCAGCCCACCAG
GTAGCGCCATCAGCGCGCCCGGCCTCCCCCCAGCCGGCGTACACATGGGG
GTCGCAGCGCCGATGGTGCGTTCCCTGCTCAACGAAATGGGCAGGGACAG
CGGCACCGGCGGCGGTCAACCGTTCCCGGACTATCCTCAGGAGCATTTTG
CTGGGAACCAACAGTTTCATATAAATTACCAGCAACACCACCAGCAGAAT
CAGGACTTCAACCAGCAGCAGCCTAATTTCATGTACTCGTCCCAGCCACA
TCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACTTTCCGGATATCGGCA
CCTCTGGAAGCCGATCGATGCCAGACATGGGCGTGCCGGGCTTAGACAAC
AACAGCAACAAAAACGACAGTAGCCATTTCTCAAAGGTCATGCGCGGAGG
CAGTGGACCCGGGTCCTGGGGGCCGTTCAGCAGCAACACCGCCTTTTCCA
CTCCCGCCTCGGAGCCCTCTTCCATCGCCGCCAGCGGCGGCGGCAGTCGA
GGCGGCGCACTGGGCGGCGTGCTGGATGGGTCGGGACGTCGGCAAGAAAA
TAGCCAGGGGGGATATTTTTCCGTGTCGGGCGGCGGCGGCGGCGGCGGCG
GCGAGTTTCCGGCCGATCGCTTTCATATAAATTACCAGCAACACCACCAG
CAGAATCAGGACTTCAACCAGCAGCAGCCTAATTTCATGTACTCGTCCCA
GCCACATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCACTTTCCGGATA
TCGGCACCTCTGGAAGCCGATCGATGCCAGACATGGGCGTGCCGGGCTTA
GACAACAACAGCAACAAAAACGACAGTAGCCATTTCTCAAAGGTCATGCG
CGGAGGCAGTGGACCCGGGTCCTGGGGGCCGTTCAGCAGCAACACCGCCT
TTTCCACTCCCGCCTCGGAGCCCTCTTCCATCGCCGCCAGCGGCGGCGGC
AGTCGAGGCGGCGCACTGGGCGGCGTGCTGGATGGGTCGGGACGTCGGCA
AGAAAATAGCCAGGGGGGATATTTTTCCGTGTCGGGCGGCGGCGGCGGCG
GCGGCGGCGAGTTTCCGGCCGATCGC
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