mRNA_P-fluviatile_contig9.15012.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig9.15012.1
Unique NamemRNA_P-fluviatile_contig9.15012.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 4.770e-155
Identity = 266/526 (50.57%), Postives = 335/526 (63.69%), Query Frame = 1 
Query:  178 MVDVVEKSTAKPPPEVRAXXXXXXXXXXXXXXXXXXXGHGLAAPKLDPTSHARHTAKLNSRVEIRRHPKRGRGLFAVRKVPAGTEVMRVPAAAAVLLCSGDRT-KGSCGGCLLPANEVGRLEACHGCPLSFCATCKKNGAVGGARGGSCDGDVGHTSSTCELTKAFVSICATKPAGGPPDEGCLRLLADIFARRAAGVIQAEEWDLIMSLESQDNAARTMSLGDRELRECARLLKDVMGIDVSHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFLKGWDFLCVCERCQREAEEFARLETCPTPINKEALRVLRRLHQMMQLAWRDNPGSPRQQALKEELERIVEVLTFAKQRKLSPLLAGRLAIGLQEAAAVVRDPNPLVHFGVCGFAADELSSVGSSMEIASRQQQYVFSTKVGNCLELSADQSRKLEFVRRAGICALQRAAELCTLFYGAEHK 1752
            MVD+V++S ++  PE R+                            DPT +AR TA L++RVE+R  PKRGRGLFA+R +PAGTEVMRVPAAAAVLL   DR+ KGSC GCLLP + VG LEACHG PLSFCA CKK   VGG  G        H S+TCELTK   +ICAT    G  D+  LRL AD+F RR AG+    EW L+ SLES DN A TMSL   EL +C RL K ++  ++S ++ QAMYR +TRNAH+VSPNT+     G VQGLFPCGALVNHSCLPN  FHC+ +SSS +GRP + QVLR+IR++ AGDELCYSYLS+ + +  VSERRD L GW F C C RC  EAEE  RL    TPI++ AL++L RL Q+  L  R+N  + R++A   +L+ I E  +  K + LSP+L  R+A+ + E  A++   N    F VCGFAADELS + ++M I  RQQQY+F+TKV  C       ++KLE +R  G  A   A  L  L+YG + K
Sbjct:    1 MVDLVDESASESSPETRSSSDG------------------------DPTRYARRTANLDARVEVRFDPKRGRGLFALRDIPAGTEVMRVPAAAAVLL---DRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKKATTVGGVSGV-------HNSATCELTKELNTICATS---GGIDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNEAHTMSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRRITRNAHTVSPNTSKP-GFGSVQGLFPCGALVNHSCLPNTFFHCVTESSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMGWGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERLAQISALGQRENAPALREEAYMPDLQLIAEFYSREKGKLLSPMLQYRVAVLMMEVTALIGATNLFFRFMVCGFAADELSELRNAMAITCRQQQYMFATKVEVCDLGETQATKKLEGIRAVGKFARNDARRLHELYYGGQSK 488
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: D7FPE3_ECTSI (Set and mynd domain containing n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE3_ECTSI)

HSP 1 Score: 130 bits (328), Expect = 4.630e-28
Identity = 109/325 (33.54%), Postives = 156/325 (48.00%), Query Frame = 1 
Query:  331 ARHTAKLNSRVEIRRHP---KRGRGLFAVRKVPAGTEVMRVPAAAAVLLCSGDRTKGS-CGGCLLPANEVGRLEACHGCPLSFCATCKKNGAVGGARGGSCDGDVGHTSSTCELTKAF----VSICATKPAGGPPDEGCLRLLADIFARRAAGVIQAEEW----DLIMSL-ESQDNAARTMSLGDRELRECARLLKDVMGIDVSHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFLKG-WDFLCVCERCQREAE 1263
            AR   +L+ R ++RR+P   KRGRG+FAV  VPAGTEV+    AAA+     DR + + C  CL   ++   L  C  C   FC    K   +  A      G+  H   TC L +      +S           +   LRL  +  +RR AG+   EEW    DL++   E     +   +L    +RE    L D  G++VS +E Q ++R + RN H+V P          V G+FP  +LVNHSC PNA FH  +  +  +G P +   LR   DV AG+E+C SYL+     +    RR+ L+  W F C C RC+ + +
Sbjct:  113 ARRRGQLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVAKQAAAL---PRDRYRPAFCRRCLTLLDKS-LLIKCRRCEDRFCG---KECVIAAA------GEGTHEV-TCGLVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDLVLPEDEGGGEGSGGGTLEPDVIREAQARLNDG-GLEVSAEEIQTVHRRLRRNFHTVQPEPLGRLLPPTVVGVFPAASLVNHSCEPNACFH--SRRAGPEG-PPLELALRCTTDVSAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCEDDTK 419
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A7S0J4V8_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J4V8_9EUKA)

HSP 1 Score: 75.1 bits (183), Expect = 1.350e-10
Identity = 54/144 (37.50%), Postives = 74/144 (51.39%), Query Frame = 1 
Query:  865 ARLLKDVMGIDVSHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFLKGWDFLCVCERCQREAEEFARLETCPTP 1296
            A LL D  G+  S D+F A+  ++  N+H V  + + +   G+  G++P GA++NHSC P AA      S + DGR   T  LR I ++  GDE+ YSYLS     SP +ERR  L    F    E  +R A E A L     P
Sbjct:   68 APLLND--GLLGSDDDFAALLLALRANSHVVLDDLSHSYPVGV--GVYPAGAMLNHSCFPTAAL-----SFASDGR---TLRLRAIVNLKPGDEVTYSYLSEPHLCSPWTERRTLLASAHFFAAEEHPKRTASEAAALSNARVP 199
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A7S3LHE8_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LHE8_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 1.930e-8
Identity = 46/167 (27.54%), Postives = 76/167 (45.51%), Query Frame = 1 
Query:  874 LKDVMGIDVSHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFLKGWDFLCVCERCQREA------------EEFARLETCPTPINKEALRVLRRLHQ 1338
            L+ ++  D S D+  ++     RN  +V     D     +   ++P G ++NHSC PN          + DG     Q++RT++ V  G+ELC+SY+   TT      R   +  + F C CERC+ E              +  RLE  P+ + ++ L++   LHQ
Sbjct:   42 LEGLLPPDASEDQILSLLSKFPRNNFAV----VDDLQKAIGAAVYPIGCILNHSCRPNCIL-------TYDGT---RQIIRTVKSVTKGEELCHSYVDLITTRD--ERREQLMTTYGFACSCERCEEEKPNSESSGAKMDLRKVQRLEDFPSEV-QDRLKIAYELHQ 191
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A0L0HW21_SPIPD (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0HW21_SPIPD)

HSP 1 Score: 68.9 bits (167), Expect = 2.030e-8
Identity = 84/303 (27.72%), Postives = 134/303 (44.22%), Query Frame = 1 
Query:  361 VEIRRHPKRGRGLFAVRKVPAGTEVMRVPAAAAVLLCSGDRTKGSCGGCLLPANEVGRLEACHGCPLSFCATCKKNGAVGGARGGSCDGDVGHTSSTCELTKAFVSICATKPAGGPPDEGCLRLLADIFARRAAGVIQAEEWDLIMSLESQDNAARTMSLGDRELRECARLLKDVMGID------VSHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFL-KGWDFLCVCERC 1248
            + ++ HP + R L     +PAGT +    A   V+L   D T  +C  CL+ ++++         PL+ C++CK+     G +    D D GH +  C++ K   +    +      DE    +L  + +    GV      +  +SL+  +       L + +  E A++++ V+          S D F  + R  + N      +  D     + +G FP GAL+NHSC PN        S   +GR    QV+RTIRDVHAG+EL  +Y+     M    ER+  L   + F C CERC
Sbjct:   21 LSLQPHPAKRRILVTSVFIPAGTILFTSNAIGTVVL---DPT--ACHYCLIRSDQLST-------PLTRCSSCKR-ATYCGKKCQKEDWDAGHAT-LCKIWKQRGN--GGESGDWDKDE---EMLVKVLSSLKKGV-DTVGIEAFLSLQGHEEV-----LNEIDKSEWAKIIQGVLKFPKMPASTTSQDLFSHLLRFRSNNF-----SIHDGELFVIGEGTFPLGALLNHSCHPNC-------SVLYEGRE---QVVRTIRDVHAGEELLGTYVDG---MGERGERQQTLWSKYGFECDCERC 280
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A507E2R6_9FUNG (SET domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507E2R6_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 3.850e-8
Identity = 84/326 (25.77%), Postives = 138/326 (42.33%), Query Frame = 1 
Query:  361 VEIRRHPKRGRGLFAVRKVPAGTEVMRVPAAAAVLL-CSGDRTKGSCGGCLLPANE---VGRLEACHGCPLSFCATCKKNGAVGGARGGSCDGDVGHT---------------SSTCELTKAFVSICATKPAGGPPDEGCLRLLADIFARRAAGVIQAEE---------WDLIMSLESQDNAARTMSLGDRELRECARLLKDVMGIDVSHDEFQAMYRSVTRNAHS-VSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRD-FLKGWDFLCVCERC 1248
            +++R    +GR + A   +P GT V+   +AA VLL  S D     C  C+ P +E    G+ ++  G             + G ++G  C G +  T               S  CE+ +    I A        D   +RL+  +   R    +             +DL+   ++ D   + ++  +    +  + L + + I  S  E   +   +  N+H+ V P     +  G+  G+FP  A++NH+C PN +F      S+  GR     ++RT+RDV AG+ELC +Y+   T   P SERR   L+   F C CERC
Sbjct:   17 IQLRATRSKGRHVMASESLPKGTLVVSEESAAFVLLKASMDEL---CLRCVRPLDEGDSKGQQQSLFG-------------SAGNSKGVVCGGCIKQTYYCSSECMNSDHERHSLECEVVRHLPGITAMHST----DYALMRLVLGVLVNRYLETVATMPSTRTPTEFVFDLVSHRKTCD--PKWLACVEACADDFVQYLPEHLSIPAS--EIVTLACRINSNSHAMVDPTGNTNQEVGV--GMFPMVAMLNHACAPNCSF-----VSTTHGR----MIVRTLRDVEAGEELCVTYVDLCT---PRSERRGKLLETKHFWCECERC 304
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A507ED68_9FUNG (SET domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ED68_9FUNG)

HSP 1 Score: 68.2 bits (165), Expect = 4.810e-8
Identity = 85/323 (26.32%), Postives = 135/323 (41.80%), Query Frame = 1 
Query:  361 VEIRRHPKRGRGLFAVRKVPAGTEVMRVPAAAAVLL-CSGDRTKGSCGGCLLPANEVGRLEACHGCPLSFCATCKKNGAVGGARGGSCDGDVGHT---------------SSTCELTKAFVSICATKPAGGPPDEGCLRLLADIFARRAAGVIQAEE---------WDLIMSLESQDNAARTMSLGDRELRECARLLKDVMGIDVSHDEFQAMYRSVTRNAHS-VSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRD-FLKGWDFLCVCERC 1248
            + +R    +GR + A   +P GT V+   AAA VLL  S D     C  C+ P +E    +                G+ G ++G  C G +  T               S  CE+ +    I A        D   +RL+  +   R    +             +DL+   ++ D   + ++  +    + A+ L + + I  S  E   +   +  N+H+ V P     +  G+  G+FP  A++NH+C PN +F      S+  GR     ++RT+RDV AG+ELC +Y+   T   P SERR   L+   F C CERC
Sbjct:   17 ILLRATRSKGRHVVASESLPKGTLVVSEDAAAFVLLKASMDEL---CLRCVRPLDEGDSKDQQQ----------SLFGSAGNSKGVVCKGCIKQTYYCSSECMDSDHERHSLECEVVRHLPGITAMHST----DYALMRLVLGVLVNRHLETVATMPSTRTPTEFVFDLVSHRKTCD--PKWLACVEACADDFAQYLPEHLSIPAS--EIVTLACRINSNSHAMVDPTGNTNQEVGV--GMFPMVAMLNHACAPNCSF-----VSTTHGR----MIVRTLRDVQAGEELCVTYVDLCT---PRSERRGKLLETKHFWCECERC 304
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: N1Q9T7_PSEFD (SET domain-containing protein n=1 Tax=Pseudocercospora fijiensis (strain CIRAD86) TaxID=383855 RepID=N1Q9T7_PSEFD)

HSP 1 Score: 66.2 bits (160), Expect = 7.700e-8
Identity = 35/88 (39.77%), Postives = 46/88 (52.27%), Query Frame = 1 
Query: 1000 GLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFLKG-WDFLCVCERCQREA 1260
            GL+PC +  NHSC PN A H          R   +     +RD+ AG+E C +YL        V ER   L+  WDF+CVC+RC+ EA
Sbjct:  272 GLYPCASYFNHSCDPNIAKH----------RRGRSWEFHALRDISAGEECCITYLGGDERDMDVLERLRRLRDVWDFVCVCQRCKAEA 349
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A1Y2D3F3_9FUNG (SET domain-containing protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D3F3_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 1.870e-7
Identity = 84/306 (27.45%), Postives = 127/306 (41.50%), Query Frame = 1 
Query:  385 RGRGLFAVRKVPAGTEVMRVPAAAAVLLCSGDRTKGSCGGCLLPANEVGRLEACHGCPLSFCATCKKNGAVGGARGGSCDGDVGHTSSTCELTKAF-----VSICATKP---AGGPPDEGCLRLLADIFARR------AAGVIQAEEWDLIMSLESQDNAA--RTMSLGDRELRECARLLKDVMGIDVSHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRD-FLKGWDFLCVCERCQ 1251
            +GR + A   + AGT V+   A+A  LL     T   C  CL P        A     L   ++  K  A+  AR   C     + S TC+   A        +    P   A    D   +RL+  +  +R      AA V +    DL+  L S       + ++  +    + A+ L   + I VS  +  ++   +  N+H +   T +      V G+FP  A++NHSC PN +F      SS  G+     ++RT+R V  G+ELC SY+   T   P  ERR   L+   F C C RC+
Sbjct:    7 KGRHVKAAADLVAGTNVVVETASALALLKHS--TDELCLCCLRPLPSESTTRAGERINLLGGSSSSKTSAIKCAR---CIKQAFYCSDTCKNDDAKRHALECEVLRDLPGITAAANVDYTLMRLVLAVLVQRSMELSGAAAVRENTSADLVFDLLSHRKTCDPKWLACVEECAEDFAQHLPPELAIPVS--DIVSLACRINSNSHGIIDPTGNTNGEVGV-GMFPLVAMLNHSCAPNCSF-----VSSTHGK----MIVRTLRPVKEGEELCVSYVDLCT---PRDERRGKLLETKHFWCACSRCE 292
[Close]
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Match: A0A7S3D0Q7_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D0Q7_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 7.500e-7
Identity = 47/157 (29.94%), Postives = 76/157 (48.41%), Query Frame = 1 
Query:  991 LVQGLFPCGALVNHSCLPNAAFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSERRDFL-KGWDFLCVCERCQREAEEFARLETCPTPINKEALRV-LRRLHQMMQLAWRDNPGSPRQQALKEELERIVEVLTFAKQRKLSP 1455
            +    FP GAL+NHSC PN   H   +           Q++R +RDV  G+ELC+SY+  + T     +RR+ L + + FLC+C  CQ + +    L +  T    EA R  L+    ++  A   + GSP   A++ E  +++      ++R   P
Sbjct:  257 IASACFPFGALLNHSCAPNCVLHYDVERK--------IQIIRCVRDVEKGEELCHSYIDVAGT---TQQRREKLSRQFFFLCMCPLCQEKGDRDPLLTS--TSAQDEAARAELQTSAALLHQAEAMDDGSP---AIQRETIKVLSDAYRTRRRYCQP 397
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig9.15012.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPE5_ECTSI4.770e-15550.57SET and MYND domain containing 1b n=1 Tax=Ectocarp... [more]
D7FPE3_ECTSI4.630e-2833.54Set and mynd domain containing n=1 Tax=Ectocarpus ... [more]
A0A7S0J4V8_9EUKA1.350e-1037.50Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A7S3LHE8_9STRA1.930e-827.54Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A0L0HW21_SPIPD2.030e-827.72Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A507E2R6_9FUNG3.850e-825.77SET domain-containing protein n=1 Tax=Chytriomyces... [more]
A0A507ED68_9FUNG4.810e-826.32SET domain-containing protein n=1 Tax=Chytriomyces... [more]
N1Q9T7_PSEFD7.700e-839.77SET domain-containing protein n=1 Tax=Pseudocercos... [more]
A0A1Y2D3F3_9FUNG1.870e-727.45SET domain-containing protein (Fragment) n=1 Tax=R... [more]
A0A7S3D0Q7_9EUKA7.500e-729.94Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig9contigP-fluviatile_contig9:137931..141964 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.2
Seed ortholog evalue1e-28
Seed eggNOG ortholog2880.D7FPE3
KEGG koko:K11426
EggNOG free text desc.SET domain
EggNOG OGsCOG2940@1,KOG2084@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_004640.1
Exons5
Model size2357
Cds size1803
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig9.15012.1prot_P-fluviatile_contig9.15012.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig9 137931..141410 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817305.7308862-CDS-P-fluviatile_contig9:137930..1379571622817305.7308862-CDS-P-fluviatile_contig9:137930..137957Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 137931..137957 +
1693572004.2154083-CDS-P-fluviatile_contig9:137930..1379571693572004.2154083-CDS-P-fluviatile_contig9:137930..137957Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 137931..137957 +
1622817305.7435699-CDS-P-fluviatile_contig9:138334..1392391622817305.7435699-CDS-P-fluviatile_contig9:138334..139239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 138335..139239 +
1693572004.2878973-CDS-P-fluviatile_contig9:138334..1392391693572004.2878973-CDS-P-fluviatile_contig9:138334..139239Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 138335..139239 +
1622817305.7542148-CDS-P-fluviatile_contig9:139734..1399961622817305.7542148-CDS-P-fluviatile_contig9:139734..139996Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 139735..139996 +
1693572004.368681-CDS-P-fluviatile_contig9:139734..1399961693572004.368681-CDS-P-fluviatile_contig9:139734..139996Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 139735..139996 +
1622817305.764392-CDS-P-fluviatile_contig9:140316..1404801622817305.764392-CDS-P-fluviatile_contig9:140316..140480Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 140317..140480 +
1693572004.448676-CDS-P-fluviatile_contig9:140316..1404801693572004.448676-CDS-P-fluviatile_contig9:140316..140480Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 140317..140480 +
1622817305.7777646-CDS-P-fluviatile_contig9:140965..1414101622817305.7777646-CDS-P-fluviatile_contig9:140965..141410Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 140966..141410 +
1693572004.4681354-CDS-P-fluviatile_contig9:140965..1414101693572004.4681354-CDS-P-fluviatile_contig9:140965..141410Porterinema fluviatile SAG_2381CDSP-fluviatile_contig9 140966..141410 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817305.7893217-UTR-P-fluviatile_contig9:141410..1419641622817305.7893217-UTR-P-fluviatile_contig9:141410..141964Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 141411..141964 +
1693572004.4804623-UTR-P-fluviatile_contig9:141410..1419641693572004.4804623-UTR-P-fluviatile_contig9:141410..141964Porterinema fluviatile SAG_2381UTRP-fluviatile_contig9 141411..141964 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig9.15012.1

>prot_P-fluviatile_contig9.15012.1 ID=prot_P-fluviatile_contig9.15012.1|Name=mRNA_P-fluviatile_contig9.15012.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=601bp
MPSFEKGCLVLYRPTKSLFEVVRWDREAAALLLSPAECRLIGGSRSGEEG
VRTRWAFECMVDVVEKSTAKPPPEVRADGGGANNAAVAATAAAPPPGHGL
AAPKLDPTSHARHTAKLNSRVEIRRHPKRGRGLFAVRKVPAGTEVMRVPA
AAAVLLCSGDRTKGSCGGCLLPANEVGRLEACHGCPLSFCATCKKNGAVG
GARGGSCDGDVGHTSSTCELTKAFVSICATKPAGGPPDEGCLRLLADIFA
RRAAGVIQAEEWDLIMSLESQDNAARTMSLGDRELRECARLLKDVMGIDV
SHDEFQAMYRSVTRNAHSVSPNTTDARASGLVQGLFPCGALVNHSCLPNA
AFHCLADSSSVDGRPAITQVLRTIRDVHAGDELCYSYLSASTTMSPVSER
RDFLKGWDFLCVCERCQREAEEFARLETCPTPINKEALRVLRRLHQMMQL
AWRDNPGSPRQQALKEELERIVEVLTFAKQRKLSPLLAGRLAIGLQEAAA
VVRDPNPLVHFGVCGFAADELSSVGSSMEIASRQQQYVFSTKVGNCLELS
ADQSRKLEFVRRAGICALQRAAELCTLFYGAEHKASIGARELAREALARR
*
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mRNA from alignment at P-fluviatile_contig9:137931..141964+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig9.15012.1 ID=mRNA_P-fluviatile_contig9.15012.1|Name=mRNA_P-fluviatile_contig9.15012.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4034bp|location=Sequence derived from alignment at P-fluviatile_contig9:137931..141964+ (Porterinema fluviatile SAG_2381)
ATGCCATCGTTTGAGAAGGGGTGCTTGGTGAGCCAATAATCTGTGGCGAC
GTCGCCTCACGTGTGTGTTTCCCGGAGGCCCCCCTGCTGAGCATGATACA
GCCACCTGTCTCTTTCGCTGCGATGCTGCCGACGATTCCCTTCGTCTTAT
TATCGTCATAGGCTATGGCTTAGATACAGTGTCGTCGGTAGCATGTGATG
TACCGTACGCCGTAAGCCAGGCGTGCATTTCCCATATCTCCTGCTATTTT
CATTGCAAGGACATTTGAACGAGCTGCGGACCATCGCGATCCTGGCGCCA
AATTCACACGCTTTTCCCTTCGTTCCCCCGCTCTTCCTATCCTTGATCCT
GCACGGGGACTGACTGCGCATCTACCCTATTCACATTGACCCCCCGCCCT
GTAGGTGCTCTACCGCCCGACAAAATCGCTGTTCGAGGTCGTGCGGTGGG
ACCGAGAGGCTGCGGCCCTGCTTCTTTCTCCGGCGGAATGTCGCCTCATC
GGCGGCAGCAGGTCCGGCGAGGAGGGTGTGAGAACGCGATGGGCGTTCGA
GTGCATGGTCGATGTTGTCGAGAAGAGTACCGCCAAGCCCCCTCCCGAAG
TGAGAGCCGACGGAGGCGGCGCCAACAATGCTGCTGTGGCCGCCACAGCG
GCTGCGCCGCCGCCAGGGCATGGCCTCGCCGCTCCCAAACTCGACCCAAC
CTCACACGCCCGTCACACAGCAAAGCTCAACAGCCGGGTCGAGATCAGGC
GTCATCCCAAGCGGGGCCGGGGGCTGTTTGCGGTCCGGAAAGTGCCGGCG
GGCACAGAGGTGATGCGGGTGCCGGCGGCGGCGGCCGTGTTGCTGTGCTC
CGGTGACAGAACGAAGGGCTCGTGCGGTGGGTGCCTTCTCCCGGCCAATG
AGGTGGGCCGCTTGGAGGCATGCCACGGCTGCCCCCTTAGTTTTTGCGCC
ACTTGCAAGAAGAATGGCGCCGTCGGTGGCGCAAGAGGAGGAAGCTGTGA
TGGTGACGTCGGCCATACCAGCAGCACGTGCGAACTGACCAAAGCGTTTG
TAAGCATCTGCGCGACGAAACCCGCAGGCGGCCCGCCCGACGAGGGGTGT
CTGCGACTCTTGGCCGATATCTTCGCACGGAGAGCAGCGGGCGTGATTCA
AGCCGAAGAGTGGGACCTGATCATGAGCCTCGAGAGCCAAGACAATGCGG
CCCGCACGATGAGCTTGGGCGACCGCGAACTTCGAGAGTGTGCTCGACTT
CTCAAGGACGTGATGGGCATCGACGTTTCGCATGACGAATTTCAGGCGAT
GTACCGCAGGTGAGTTTTGGTCTATGTGGCGGTGGCATCTAGATTCGGAT
AGCTCTCACTCGATTAAACAGATAAAGTGATGTGGAGCACAATGCGACGG
GTGTTGTAAGAGCCAACTTGTTGAAGGCAGCTTTTTCTTGCGAGTGTTTC
CCTGTCCTTTGGCGGGTGTTTCTCGTTTTCAACATGTTTTTGGCGTGTTT
CCTTTGAAGGGGCGGGTTTTTGTTGTTTCCAAAAGTGCGGATGCATAAGC
GTCGTAGATGGCCGTGCAGCTATGACGTCGTTCGCCCGACAGTTCATTTC
AATCCCAACGTGCCGACCCGCATTTGGCCATGAACTCACGCCATCTGCTA
GTTTTGTCCACGAGCACAGGTCGTCAGTAGGCTAGAGTAGCAGCGCATGC
TCGGTCATTAATCGCCCACCCATTTTTGTTTCCTTTGAATGCTCATTGAA
CAAAGCCGCCCCCTTTTGCTCCGCCGCTCTTTGCACTTTTGAAATCGTCA
TTAGCGTCACACGCAACGCACACTCGGTCTCCCCCAACACAACGGACGCT
CGTGCCTCCGGGTTGGTCCAAGGTCTCTTCCCCTGCGGGGCCCTCGTCAA
TCATTCCTGCCTGCCAAACGCGGCTTTCCACTGCTTGGCGGACTCTTCTT
CTGTCGATGGGCGGCCGGCGATCACACAAGTGTTGAGAACTATCCGCGAC
GTCCATGCGGGGGACGAGCTCTGCTATTCATACCTTTCCGCCAGTACGAC
GATGAGCCCCGTTTCTGTGAGTGAAGGGCGGGGAGTCACGTGGGGCGACA
ACATCCGGTGACATACCGAAACGCTCCCACTTTCCCGACAGGAAACGGCA
GACCGTACATTGAAAACAGGGCAACGCGGAAGTTTTTCTGCTACAAGCCA
AAGGTGTAGCGCTCATCGCGGTCCGCGTGCAAATTCAGACAGAACGCCAT
CGCACGGCTCCCGTGCAGCGATTTCCGGGGCACGGCATTGTGCTCTGCGT
CCCTTTCTTGCATCGCTCTCGGCTCGTCTCCCCATCGCCGAGAGTCCACA
TTTCATGGTACTCGATCGTGTCTCTTGGATCTGTAGGAACGCCGCGATTT
CCTGAAGGGATGGGACTTTCTGTGCGTCTGCGAGAGGTGCCAGCGTGAAG
CTGAAGAATTCGCCAGGCTGGAAACCTGCCCAACGCCGATCAACAAAGAG
GCCTTGAGAGTGCTGCGGCGTCTTCACCAGATGATGCAACTCGCGTGGCG
GTAAGGCACCGAAGCAGGAGCCGCCGTTCGATGTTTGCGAGCGTGTTCGT
CATGAAGAAGTCTCCAGGACAGAGTTCCGACTCATTCGCAAATGGGGCAT
GTTTGTTTCGGACTTGGCGTGCAGCGTATTTTTATCGGTGCCCGGTTTTG
TCGTCTGTTCCTGTGCGCTCGTTGTGGCAGGCGTATATCTCGATGCAGAT
TGTTCCTGCCGTTGCTCTCTCCCCTTGTCGACTGACCGCCAGGAATCTTC
GGGTGCGGGTTCTTCTCAACTAGGTCGTCCGAGAGTTGCTTTTTTGGCCC
ATCCCGCGTGATCGACATGGTTTCTGTCCTGCCAGCTGTGGGCATGAGTG
TGTCGAAGCACGACAAGGTCAACAAACAACTACTGCAGCCGACGACTGAA
GTTCAGCACTGCCCTTTCTCGCCAACGAAGGGATCTTAATGATTTTCCGG
TCTACTGCACCCCTTTCGTTTCGGTCGCAAAACAGGGACAACCCCGGAAG
TCCAAGGCAGCAAGCGCTGAAGGAGGAGCTCGAACGAATCGTAGAGGTCT
TGACATTCGCGAAGCAGCGAAAGCTCTCGCCGCTGCTCGCTGGTAGGTTG
GCGATCGGCCTGCAGGAAGCAGCCGCGGTCGTCCGTGACCCGAACCCTCT
TGTCCATTTTGGGGTGTGTGGCTTCGCAGCTGACGAACTGTCCAGCGTAG
GCAGCTCCATGGAAATCGCTTCCCGCCAGCAGCAGTACGTCTTCTCGACA
AAAGTCGGCAACTGCCTCGAACTAAGCGCGGATCAATCACGAAAGTTGGA
ATTTGTTAGGCGTGCCGGGATCTGCGCTCTGCAGCGCGCGGCAGAGCTTT
GCACGTTATTTTACGGAGCAGAGCACAAGGCAAGCATCGGAGCTCGTGAG
CTCGCACGGGAGGCCCTTGCTCGTCGTTGAAGCACAAGCAGCGCGTTCAA
TTCCTCGGCTCTCATTGAACGAAAGCGAGGTCGTACGCGCGCGCGTTTTG
TGTTTGCGGATTTCCGACTCGAAGCAAGTGTGCTCTGGCGCGTTGTCGTG
TATCAGCTTGTGTCGGTTGGTCAATACGCGCCGTTGGCCTTGCTTTTTTC
TTAAGGTTCTCCCTCTCTGTGTACCTGCTTGTAAACTAACAAATATGTCA
GATTTATGCCAGTGCTCCTGCGCCGTGTTTTCTGAGTAGAAGTGCCACAA
GTTATTGTAGGCTTCTGTTCGATGTGTTGGGCTCGAAGTCGCCCGGGTCG
TTTGTTGGGTTGGTTCGAGCCCGTGTTGGTAGTGCTTGGCATGATAGGAT
CAGAACTCTACCAGCGACGAACCCCAAACTGTGCGTGCTTGCGTAATGTT
GCTCGCATAATTGTCGATGGTTGTTCCAATCTGCCCGTAAAAACTTAAAT
TATCGAGCGTCGGCAAGAATAACGGTGGGCTATGTTCAATCCTACCCGGG
AGAGATGCGTACGTGATCCTTTCCCCTTTTCCCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig9:137931..141964+

>mRNA_P-fluviatile_contig9.15012.1 ID=mRNA_P-fluviatile_contig9.15012.1|Name=mRNA_P-fluviatile_contig9.15012.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3606bp|location=Sequence derived from alignment at P-fluviatile_contig9:137931..141964+ (Porterinema fluviatile SAG_2381)
ATGCCATCGTTTGAGAAGGGGTGCTTGATGCCATCGTTTGAGAAGGGGTG
CTTGGTGCTCTACCGCCCGACAAAATCGCTGTTCGAGGTCGTGCGGTGGG
ACCGAGAGGCTGCGGCCCTGCTTCTTTCTCCGGCGGAATGTCGCCTCATC
GGCGGCAGCAGGTCCGGCGAGGAGGGTGTGAGAACGCGATGGGCGTTCGA
GTGCATGGTCGATGTTGTCGAGAAGAGTACCGCCAAGCCCCCTCCCGAAG
TGAGAGCCGACGGAGGCGGCGCCAACAATGCTGCTGTGGCCGCCACAGCG
GCTGCGCCGCCGCCAGGGCATGGCCTCGCCGCTCCCAAACTCGACCCAAC
CTCACACGCCCGTCACACAGCAAAGCTCAACAGCCGGGTCGAGATCAGGC
GTCATCCCAAGCGGGGCCGGGGGCTGTTTGCGGTCCGGAAAGTGCCGGCG
GGCACAGAGGTGATGCGGGTGCCGGCGGCGGCGGCCGTGTTGCTGTGCTC
CGGTGACAGAACGAAGGGCTCGTGCGGTGGGTGCCTTCTCCCGGCCAATG
AGGTGGGCCGCTTGGAGGCATGCCACGGCTGCCCCCTTAGTTTTTGCGCC
ACTTGCAAGAAGAATGGCGCCGTCGGTGGCGCAAGAGGAGGAAGCTGTGA
TGGTGACGTCGGCCATACCAGCAGCACGTGCGAACTGACCAAAGCGTTTG
TAAGCATCTGCGCGACGAAACCCGCAGGCGGCCCGCCCGACGAGGGGTGT
CTGCGACTCTTGGCCGATATCTTCGCACGGAGAGCAGCGGGCGTGATTCA
AGCCGAAGAGTGGGACCTGATCATGAGCCTCGAGAGCCAAGACAATGCGG
CCCGCACGATGAGCTTGGGCGACCGCGAACTTCGAGAGTGTGCTCGACTT
CTCAAGGACGTGATGGGCATCGACGTTTCGCATGACGAATTTCAGGCGAT
GTACCGCAGGTGCTCTACCGCCCGACAAAATCGCTGTTCGAGGTCGTGCG
GTGGGACCGAGAGGCTGCGGCCCTGCTTCTTTCTCCGGCGGAATGTCGCC
TCATCGGCGGCAGCAGGTCCGGCGAGGAGGGTGTGAGAACGCGATGGGCG
TTCGAGTGCATGGTCGATGTTGTCGAGAAGAGTACCGCCAAGCCCCCTCC
CGAAGTGAGAGCCGACGGAGGCGGCGCCAACAATGCTGCTGTGGCCGCCA
CAGCGGCTGCGCCGCCGCCAGGGCATGGCCTCGCCGCTCCCAAACTCGAC
CCAACCTCACACGCCCGTCACACAGCAAAGCTCAACAGCCGGGTCGAGAT
CAGGCGTCATCCCAAGCGGGGCCGGGGGCTGTTTGCGGTCCGGAAAGTGC
CGGCGGGCACAGAGGTGATGCGGGTGCCGGCGGCGGCGGCCGTGTTGCTG
TGCTCCGGTGACAGAACGAAGGGCTCGTGCGGTGGGTGCCTTCTCCCGGC
CAATGAGGTGGGCCGCTTGGAGGCATGCCACGGCTGCCCCCTTAGTTTTT
GCGCCACTTGCAAGAAGAATGGCGCCGTCGGTGGCGCAAGAGGAGGAAGC
TGTGATGGTGACGTCGGCCATACCAGCAGCACGTGCGAACTGACCAAAGC
GTTTGTAAGCATCTGCGCGACGAAACCCGCAGGCGGCCCGCCCGACGAGG
GGTGTCTGCGACTCTTGGCCGATATCTTCGCACGGAGAGCAGCGGGCGTG
ATTCAAGCCGAAGAGTGGGACCTGATCATGAGCCTCGAGAGCCAAGACAA
TGCGGCCCGCACGATGAGCTTGGGCGACCGCGAACTTCGAGAGTGTGCTC
GACTTCTCAAGGACGTGATGGGCATCGACGTTTCGCATGACGAATTTCAG
GCGATGTACCGCAGCGTCACACGCAACGCACACTCGGTCTCCCCCAACAC
AACGGACGCTCGTGCCTCCGGGTTGGTCCAAGGTCTCTTCCCCTGCGGGG
CCCTCGTCAATCATTCCTGCCTGCCAAACGCGGCTTTCCACTGCTTGGCG
GACTCTTCTTCTGTCGATGGGCGGCCGGCGATCACACAAGTGTTGAGAAC
TATCCGCGACGTCCATGCGGGGGACGAGCTCTGCTATTCATACCTTTCCG
CCAGTACGACGATGAGCCCCGTTTCTCGTCACACGCAACGCACACTCGGT
CTCCCCCAACACAACGGACGCTCGTGCCTCCGGGTTGGTCCAAGGTCTCT
TCCCCTGCGGGGCCCTCGTCAATCATTCCTGCCTGCCAAACGCGGCTTTC
CACTGCTTGGCGGACTCTTCTTCTGTCGATGGGCGGCCGGCGATCACACA
AGTGTTGAGAACTATCCGCGACGTCCATGCGGGGGACGAGCTCTGCTATT
CATACCTTTCCGCCAGTACGACGATGAGCCCCGTTTCTGAACGCCGCGAT
TTCCTGAAGGGATGGGACTTTCTGTGCGTCTGCGAGAGGTGCCAGCGTGA
AGCTGAAGAATTCGCCAGGCTGGAAACCTGCCCAACGCCGATCAACAAAG
AGGCCTTGAGAGTGCTGCGGCGTCTTCACCAGATGATGCAACTCGCGTGG
CGGAACGCCGCGATTTCCTGAAGGGATGGGACTTTCTGTGCGTCTGCGAG
AGGTGCCAGCGTGAAGCTGAAGAATTCGCCAGGCTGGAAACCTGCCCAAC
GCCGATCAACAAAGAGGCCTTGAGAGTGCTGCGGCGTCTTCACCAGATGA
TGCAACTCGCGTGGCGGGACAACCCCGGAAGTCCAAGGCAGCAAGCGCTG
AAGGAGGAGCTCGAACGAATCGTAGAGGTCTTGACATTCGCGAAGCAGCG
AAAGCTCTCGCCGCTGCTCGCTGGTAGGTTGGCGATCGGCCTGCAGGAAG
CAGCCGCGGTCGTCCGTGACCCGAACCCTCTTGTCCATTTTGGGGTGTGT
GGCTTCGCAGCTGACGAACTGTCCAGCGTAGGCAGCTCCATGGAAATCGC
TTCCCGCCAGCAGCAGTACGTCTTCTCGACAAAAGTCGGCAACTGCCTCG
AACTAAGCGCGGATCAATCACGAAAGTTGGAATTTGTTAGGCGTGCCGGG
ATCTGCGCTCTGCAGCGCGCGGCAGAGCTTTGCACGTTATTTTACGGAGC
AGAGCACAAGGCAAGCATCGGAGCTCGTGAGCTCGCACGGGAGGCCCTTG
CTCGTCGTTGAGGACAACCCCGGAAGTCCAAGGCAGCAAGCGCTGAAGGA
GGAGCTCGAACGAATCGTAGAGGTCTTGACATTCGCGAAGCAGCGAAAGC
TCTCGCCGCTGCTCGCTGGTAGGTTGGCGATCGGCCTGCAGGAAGCAGCC
GCGGTCGTCCGTGACCCGAACCCTCTTGTCCATTTTGGGGTGTGTGGCTT
CGCAGCTGACGAACTGTCCAGCGTAGGCAGCTCCATGGAAATCGCTTCCC
GCCAGCAGCAGTACGTCTTCTCGACAAAAGTCGGCAACTGCCTCGAACTA
AGCGCGGATCAATCACGAAAGTTGGAATTTGTTAGGCGTGCCGGGATCTG
CGCTCTGCAGCGCGCGGCAGAGCTTTGCACGTTATTTTACGGAGCAGAGC
ACAAGGCAAGCATCGGAGCTCGTGAGCTCGCACGGGAGGCCCTTGCTCGT
CGTTGA
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