mRNA_P-fluviatile_contig89.14993.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig89.14993.1
Unique NamemRNA_P-fluviatile_contig89.14993.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: D1J792_ECTSI (ATP synthase subunit a, chloroplastic n=40 Tax=Phaeophyceae TaxID=2870 RepID=D1J792_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 1.360e-126
Identity = 184/190 (96.84%), Postives = 188/190 (98.95%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGKEYRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 570
            GTSNK++VP GWQNFMESVVEFVKEIA+NQLGKEYRPWLPFIGTLFLFVFGCNWAGA+IPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVL LLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH
Sbjct:   58 GTSNKNIVPNGWQNFMESVVEFVKEIAENQLGKEYRPWLPFIGTLFLFVFGCNWAGAIIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 247
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A8F0F721_9PHAE (ATP synthase CF0 A subunit subunit IV n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F721_9PHAE)

HSP 1 Score: 357 bits (917), Expect = 1.460e-121
Identity = 178/191 (93.19%), Postives = 185/191 (96.86%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGK-EYRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 570
            GTSNK  +P GWQNFME+VVEFVK+IAQNQLG   YRPWLPFIGTLFLF+FGCNWAGA+IPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGN+LADELTVSVLTLLVPLIVPLPVM+LGVFASSVQALIFSTLAGAYIAEAVEGH
Sbjct:   58 GTSNKEAIPTGWQNFMEAVVEFVKDIAQNQLGATNYRPWLPFIGTLFLFIFGCNWAGALIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTLLVPLIVPLPVMVLGVFASSVQALIFSTLAGAYIAEAVEGH 248
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A8E6D5Q8_9PHAE (ATP synthase subunit a, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5Q8_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 1.600e-118
Identity = 175/191 (91.62%), Postives = 183/191 (95.81%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 570
            GTS +  VP+GWQNFMESVVEFVK+IAQNQLG+  YRPWLPFIGTLFLF+FGCNWAGA+IPWKLIKLSEGEFGAPTNDINTTVAL+LLTSFMYFYAGLSTKG GYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVL LLVPLI+PLPVMLLGVFASSVQALIFSTLAGAYIAEAVE H
Sbjct:   58 GTSRRKTVPEGWQNFMESVVEFVKDIAQNQLGESAYRPWLPFIGTLFLFIFGCNWAGALIPWKLIKLSEGEFGAPTNDINTTVALSLLTSFMYFYAGLSTKGLGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLALLVPLIIPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEEH 248
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A141BSD6_9PHAE (ATP synthase subunit a, chloroplastic n=14 Tax=Fucales TaxID=3009 RepID=A0A141BSD6_9PHAE)

HSP 1 Score: 347 bits (890), Expect = 1.860e-117
Identity = 169/191 (88.48%), Postives = 183/191 (95.81%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 570
            GTSNK+++P GWQNFMESVVEF+K+IA NQLG+  YRPWLPFIGT+FLFVFGCNWAGAVIPWKLIKL+EGEF APTNDINTTVALALLTSF YFYAG STKGFGYFKRYIEPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVLT+LVPL +PLPVMLLGVFASSVQALIFSTLAGAYIAE++EGH
Sbjct:   58 GTSNKNIIPNGWQNFMESVVEFIKDIAVNQLGESAYRPWLPFIGTIFLFVFGCNWAGAVIPWKLIKLNEGEFAAPTNDINTTVALALLTSFTYFYAGFSTKGFGYFKRYIEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTVLVPLFIPLPVMLLGVFASSVQALIFSTLAGAYIAESIEGH 248
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: D1GJH7_FUCVE (ATP synthase subunit a, chloroplastic n=5 Tax=Fucales TaxID=3009 RepID=D1GJH7_FUCVE)

HSP 1 Score: 333 bits (855), Expect = 4.760e-112
Identity = 163/189 (86.24%), Postives = 178/189 (94.18%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVE 564
            GT NK+++P GWQNFMESVVEF+K+IA NQLG+  YRPWLPFIGT+FLFVFGCNWAGA+IPWKLIKL EGEF APTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVLT+LVPL +PLPVMLLGVFASSVQALIFSTLAGAY+   ++
Sbjct:   58 GTLNKNIIPNGWQNFMESVVEFIKDIAVNQLGESAYRPWLPFIGTIFLFVFGCNWAGAIIPWKLIKLPEGEFAAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTVLVPLFIPLPVMLLGVFASSVQALIFSTLAGAYLLNLLK 246
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A7S6U9W7_9STRA (ATP synthase subunit a, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9W7_9STRA)

HSP 1 Score: 326 bits (836), Expect = 2.770e-109
Identity = 158/189 (83.60%), Postives = 176/189 (93.12%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVE 564
            GT NK  VP GWQNFME+V+EF ++IAQNQLGK  Y+PW+PFI TLFLF+FGCNWAGA+IPWKLIKLSEGE  APTNDINTTVALALLTSFMYFYAG+S KG GYFKRY+EPTP+LLPINILEDFTKPLSLSFRLFGN+LADELTVSVLT+LVPLI+PLP+M+LG+FASSVQALIFSTLA AYIAEA+E
Sbjct:   58 GTLNKQRVPTGWQNFMEAVIEFTQDIAQNQLGKTFYKPWVPFISTLFLFIFGCNWAGALIPWKLIKLSEGELAAPTNDINTTVALALLTSFMYFYAGISKKGLGYFKRYLEPTPILLPINILEDFTKPLSLSFRLFGNVLADELTVSVLTMLVPLIIPLPIMVLGIFASSVQALIFSTLAAAYIAEALE 246
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A4Y7ID77_PAPSO (ATP-synt_C domain-containing protein n=1 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7ID77_PAPSO)

HSP 1 Score: 326 bits (835), Expect = 6.370e-108
Identity = 177/296 (59.80%), Postives = 212/296 (71.62%), Query Frame = 1 
Query:   22 VPKGWQNFMESVVEFVKEIAQNQLGKEYRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH*VALYLIILIIIKRIYQKFVNF--FLYNPRIKYMDSIVSAASVIAAGLAVGLAAIGPGIGQGTAAGQAVEGIARQPEAENKIRGTLLLSFAFMEALTIYGLVVALALLFANPF 903
            +P   QNF E V+EF++++++ Q+G+EY PW+PFIGT+FLF+F  NW+GA++PWK+I+L  G+   PTNDINTTVALALLTS  YFYAGL+ KG GYF +YI+PTP+LLPINILEDFTKPLSLSFRLFGNILADEL V VL  LVPL+VP+PVM LG+F S ++ALIF+TLA AYI E++EG                Y +  +F  F Y   I +        S+                   TAAGQAVEGIARQPEAE KIRGTLLLS AFMEALTIYGLVVAL LLFANPF
Sbjct:   64 IPTNGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGKLAPPTNDINTTVALALLTSVAYFYAGLTKKGLGYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIKALIFATLAAAYICESMEGA---------------YHESTDFCHFRYCCWIGHRACFYWTRSL-----------------SSTAAGQAVEGIARQPEAEGKIRGTLLLSLAFMEALTIYGLVVALVLLFANPF 327
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A2I4Q287_9PHAE (ATP synthase subunit a, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q287_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 1.200e-104
Identity = 159/191 (83.25%), Postives = 172/191 (90.05%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGK-EYRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH 570
            GT++K ++PK  QNFME VV FVK+IA NQ+G   Y+PWLPF+G LFLF+FGCN AGA+IPWKLIKL EGEFGAPTNDINTTVALALLTSFMYFYAG+S KGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVL LLVPLI PLPVM LGVFASSVQALIFSTLA AYI E++EG 
Sbjct:   55 GTADKQLIPKTGQNFMELVVLFVKDIAVNQIGAGSYKPWLPFVGNLFLFIFGCNLAGALIPWKLIKLPEGEFGAPTNDINTTVALALLTSFMYFYAGISKKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLVLLVPLIAPLPVMALGVFASSVQALIFSTLAAAYIGESLEGE 245
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A6A5LUY7_LUPAL (ATP-synt_C domain-containing protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LUY7_LUPAL)

HSP 1 Score: 324 bits (831), Expect = 2.350e-103
Identity = 173/268 (64.55%), Postives = 207/268 (77.24%), Query Frame = 1 
Query:   10 NKSMVPKGWQNFMESVVEFVKEIAQNQLGKEYRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH*VALYLIILIIIKRIYQKFVNFFLYNPRIKYMDSIVSAASVIAAGLAVGLAAIGPGIGQGTAAGQAVEGIARQPEAENKIR 813
            N   +P   QNF E V+EF++++++ Q+G+EY PW+PFIGTLFLF+F  NW+GA++PWK+I+L  GE  APTNDINTTVALALLTS  YFYAGLS KG  YF +YI+PTP+LLPINILEDFTKPLSLSFRLFGNILADEL V VL  LVPL+VP+PVM LG+F S +QALIF+TLA AYI            LI L+I+       ++ F        M+ ++SAASVIAAGLAVGLA+IGPG+GQGTAAGQAVEGIARQPEAE KIR
Sbjct:  251 NPQTIPTFGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTLFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAYFYAGLSKKGLAYFGKYIQPTPILLPINILEDFTKPLSLSFRLFGNILADELVVVVLVSLVPLVVPIPVMFLGLFTSGIQALIFATLAAAYIV-----------LIWLLIVSLT----ISLFYLGCEELIMNPLISAASVIAAGLAVGLASIGPGVGQGTAAGQAVEGIARQPEAEGKIR 503
[Close]
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Match: A0A089X7P9_9STRA (ATP synthase subunit a, chloroplastic n=6 Tax=Coscinodiscophyceae TaxID=33836 RepID=A0A089X7P9_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.160e-102
Identity = 147/189 (77.78%), Postives = 169/189 (89.42%), Query Frame = 1 
Query:    1 GTSNKSMVPKGWQNFMESVVEFVKEIAQNQLGKE-YRPWLPFIGTLFLFVFGCNWAGAVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFKRYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIVPLPVMLLGVFASSVQALIFSTLAGAYIAEAVE 564
            GT N   +P GWQNFME+ ++++ EIA++QLG+  Y+ W+PFIGTLFLF+FGCNWAGA+IPWKLIKL EGEF APTNDINTTVALALLTSF YFYAGLS KG GYFKRYI+P PLLLPINILEDFTKPLSLSFRLFGN+LADELT+SVLT LVPL++PLP+M+LG+FA SVQALIFSTLA AYI EA+E
Sbjct:   54 GTQNTERIPNGWQNFMEATIDYIVEIARDQLGESFYKEWVPFIGTLFLFIFGCNWAGAIIPWKLIKLPEGEFAAPTNDINTTVALALLTSFAYFYAGLSKKGLGYFKRYIQPIPLLLPINILEDFTKPLSLSFRLFGNVLADELTISVLTSLVPLVIPLPIMMLGIFAGSVQALIFSTLAAAYITEALE 242
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14993.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J792_ECTSI1.360e-12696.84ATP synthase subunit a, chloroplastic n=40 Tax=Pha... [more]
A0A8F0F721_9PHAE1.460e-12193.19ATP synthase CF0 A subunit subunit IV n=1 Tax=Prot... [more]
A0A8E6D5Q8_9PHAE1.600e-11891.62ATP synthase subunit a, chloroplastic n=1 Tax=Ishi... [more]
A0A141BSD6_9PHAE1.860e-11788.48ATP synthase subunit a, chloroplastic n=14 Tax=Fuc... [more]
D1GJH7_FUCVE4.760e-11286.24ATP synthase subunit a, chloroplastic n=5 Tax=Fuca... [more]
A0A7S6U9W7_9STRA2.770e-10983.60ATP synthase subunit a, chloroplastic n=1 Tax=Schi... [more]
A0A4Y7ID77_PAPSO6.370e-10859.80ATP-synt_C domain-containing protein n=1 Tax=Papav... [more]
A0A2I4Q287_9PHAE1.200e-10483.25ATP synthase subunit a, chloroplastic n=1 Tax=Dict... [more]
A0A6A5LUY7_LUPAL2.350e-10364.55ATP-synt_C domain-containing protein n=2 Tax=Lupin... [more]
A0A089X7P9_9STRA1.160e-10277.78ATP synthase subunit a, chloroplastic n=6 Tax=Cosc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:131989..132923 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.9
Seed ortholog evalue3.5e-97
Seed eggNOG ortholog2880.D1J792
Preferred nameATP6
KEGG koko:K02108,ko:K02126,ko:K02967
KEGG TC3.A.2.1
KEGG Pathwayko00190,ko00195,ko01100,ko03010,ko04714,ko05010,ko05012,ko05016,map00190,map00195,map01100,map03010,map04714,map05010,map05012,map05016
KEGG ModuleM00157,M00158,M00178,M00179
GOsGO:0000276,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005753,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006839,GO:0006950,GO:0006996,GO:0007005,GO:0007006,GO:0007007,GO:0007275,GO:0007568,GO:0008150,GO:0008152,GO:0008324,GO:0008340,GO:0008553,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009544,GO:0009579,GO:0009628,GO:0009987,GO:0010259,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016021,GO:0016043,GO:0016310,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019725,GO:0019829,GO:0019866,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0031090,GO:0031224,GO:0031226,GO:0031966,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0033177,GO:0034220,GO:0034357,GO:0034641,GO:0034654,GO:0036296,GO:0036442,GO:0040011,GO:0042407,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042651,GO:0042776,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044455,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046716,GO:0046907,GO:0046933,GO:0048856,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055035,GO:0055085,GO:0055086,GO:0055093,GO:0060249,GO:0061024,GO:0065007,GO:0065008,GO:0070050,GO:0070482,GO:0071704,GO:0071840,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098798,GO:0098800,GO:0098807,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600,GO:1990542
EggNOG free text desc.ATP synthesis coupled proton transport
EggNOG OGsCOG0356@1,KOG4665@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko00194,ko03011,ko03029,ko03110
Hectar predicted targeting categoryother localisation
Exons1
Model size935
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14993.1prot_P-fluviatile_contig89.14993.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig89 132007..132561 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817300.9613187-UTR-P-fluviatile_contig89:131988..1320061622817300.9613187-UTR-P-fluviatile_contig89:131988..132006Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 131989..132006 +
1693571994.583005-UTR-P-fluviatile_contig89:131988..1320061693571994.583005-UTR-P-fluviatile_contig89:131988..132006Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 131989..132006 +
1622817300.9874232-UTR-P-fluviatile_contig89:132561..1329231622817300.9874232-UTR-P-fluviatile_contig89:132561..132923Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 132562..132923 +
1693571994.6079237-UTR-P-fluviatile_contig89:132561..1329231693571994.6079237-UTR-P-fluviatile_contig89:132561..132923Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 132562..132923 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817300.9733777-CDS-P-fluviatile_contig89:132006..1325611622817300.9733777-CDS-P-fluviatile_contig89:132006..132561Porterinema fluviatile SAG_2381CDSP-fluviatile_contig89 132007..132561 +
1693571994.5983815-CDS-P-fluviatile_contig89:132006..1325611693571994.5983815-CDS-P-fluviatile_contig89:132006..132561Porterinema fluviatile SAG_2381CDSP-fluviatile_contig89 132007..132561 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig89.14993.1

>prot_P-fluviatile_contig89.14993.1 ID=prot_P-fluviatile_contig89.14993.1|Name=mRNA_P-fluviatile_contig89.14993.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=185bp
MVPKGWQNFMESVVEFVKEIAQNQLGKEYRPWLPFIGTLFLFVFGCNWAG
AVIPWKLIKLSEGEFGAPTNDINTTVALALLTSFMYFYAGLSTKGFGYFK
RYIEPTPLLLPINILEDFTKPLSLSFRLFGNILADELTVSVLTLLVPLIV
PLPVMLLGVFASSVQALIFSTLAGAYIAEAVEGH*
back to top

mRNA from alignment at P-fluviatile_contig89:131989..132923+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig89.14993.1 ID=mRNA_P-fluviatile_contig89.14993.1|Name=mRNA_P-fluviatile_contig89.14993.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=935bp|location=Sequence derived from alignment at P-fluviatile_contig89:131989..132923+ (Porterinema fluviatile SAG_2381)
GGGACTTCAAATAAAAGTATGGTTCCTAAGGGTTGGCAAAATTTTATGGA
GTCTGTTGTTGAATTCGTTAAAGAAATTGCTCAGAATCAACTTGGTAAAG
AATATCGACCTTGGTTACCGTTTATAGGGACTTTATTTCTATTCGTTTTT
GGTTGTAATTGGGCAGGAGCTGTGATCCCGTGGAAATTAATAAAACTTTC
AGAAGGTGAATTTGGAGCGCCAACAAATGATATCAATACAACTGTTGCTT
TAGCTTTATTAACATCATTTATGTATTTTTATGCTGGTTTAAGTACAAAG
GGTTTTGGTTATTTTAAACGCTATATAGAACCTACGCCCCTTTTGCTACC
GATTAATATCTTAGAAGATTTTACAAAACCTCTTTCACTAAGTTTTCGTT
TATTCGGTAATATATTAGCGGATGAATTAACTGTTTCTGTATTAACTTTA
TTAGTTCCTTTAATTGTACCTTTACCGGTAATGCTTTTGGGTGTGTTTGC
TAGTTCAGTCCAAGCTTTAATTTTTTCAACTTTAGCTGGAGCTTATATTG
CTGAAGCCGTGGAAGGACATTAAGTAGCTTTATATTTAATAATTTTAATA
ATAATAAAAAGAATATATCAGAAATTTGTTAATTTTTTCTTATATAACCC
ACGAATAAAGTATATGGATTCTATCGTTTCTGCTGCATCTGTTATAGCTG
CTGGTCTTGCTGTTGGTTTAGCTGCAATTGGTCCAGGAATCGGACAAGGA
ACTGCTGCTGGTCAAGCTGTTGAAGGTATCGCTCGTCAACCAGAAGCAGA
AAATAAAATTCGTGGTACTTTACTTCTAAGTTTTGCCTTTATGGAAGCTT
TAACTATTTATGGCTTAGTTGTAGCTTTAGCTTTATTATTCGCAAACCCT
TTTACTAATTAATTAATTAATAATTAATACTAAAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig89:131989..132923+

>mRNA_P-fluviatile_contig89.14993.1 ID=mRNA_P-fluviatile_contig89.14993.1|Name=mRNA_P-fluviatile_contig89.14993.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1110bp|location=Sequence derived from alignment at P-fluviatile_contig89:131989..132923+ (Porterinema fluviatile SAG_2381)
ATGGTTCCTAAGGGTTGGCAAAATTTTATGGAGTCTGTTGTTGAATTCGT
TAAAGAAATTGCTCAGAATCAACTTGGTAAAGAATATCGACCTTGGTTAC
CGTTTATAGGGACTTTATTTCTATTCGTTTTTGGTTGTAATTGGGCAGGA
GCTGTGATCCCGTGGAAATTAATAAAACTTTCAGAAGGTGAATTTGGAGC
GCCAACAAATGATATCAATACAACTGTTGCTTTAGCTTTATTAACATCAT
TTATGTATTTTTATGCTGGTTTAAGTACAAAGGGTTTTGGTTATTTTAAA
CGCTATATAGAACCTACGCCCCTTTTGCTACCGATTAATATCTTAGAAGA
TTTTACAAAACCTCTTTCACTAAGTTTTCGTTTATTCGGTAATATATTAG
CGGATGAATTAACTGTTTCTGTATTAACTTTATTAGTTCCTTTAATTGTA
CCTTTACCGGTAATGCTTTTGGGTGTGTTTGCTAGTTCAGTCCAAGCTTT
AATTTTTTCAACTTTAGCTGGAGCTTATATTGCTGAAGCCGTGGAAGGAC
ATTAAATGGTTCCTAAGGGTTGGCAAAATTTTATGGAGTCTGTTGTTGAA
TTCGTTAAAGAAATTGCTCAGAATCAACTTGGTAAAGAATATCGACCTTG
GTTACCGTTTATAGGGACTTTATTTCTATTCGTTTTTGGTTGTAATTGGG
CAGGAGCTGTGATCCCGTGGAAATTAATAAAACTTTCAGAAGGTGAATTT
GGAGCGCCAACAAATGATATCAATACAACTGTTGCTTTAGCTTTATTAAC
ATCATTTATGTATTTTTATGCTGGTTTAAGTACAAAGGGTTTTGGTTATT
TTAAACGCTATATAGAACCTACGCCCCTTTTGCTACCGATTAATATCTTA
GAAGATTTTACAAAACCTCTTTCACTAAGTTTTCGTTTATTCGGTAATAT
ATTAGCGGATGAATTAACTGTTTCTGTATTAACTTTATTAGTTCCTTTAA
TTGTACCTTTACCGGTAATGCTTTTGGGTGTGTTTGCTAGTTCAGTCCAA
GCTTTAATTTTTTCAACTTTAGCTGGAGCTTATATTGCTGAAGCCGTGGA
AGGACATTAA
back to top