mRNA_P-fluviatile_contig89.14967.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig89.14967.1
Unique NamemRNA_P-fluviatile_contig89.14967.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A0R6LUW4_UNDPI (Protein translocase subunit SecY n=28 Tax=Laminariales TaxID=2886 RepID=A0A0R6LUW4_UNDPI)

HSP 1 Score: 420 bits (1080), Expect = 1.230e-144
Identity = 227/249 (91.16%), Postives = 235/249 (94.38%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            DIKTFSPL ESNTSTTAVASILNSFSGG NASFSILSLGILPNINASIIIQLLTTI+P+LLKLQKEEGEYGRRKLTDYTRYLTFFC+II SIVTTYSFRPLIFNWN+LVL  +SLTLIAGSMIILWFSELITKDGIGNG+SILICFNIVSNFPDQLRAMIL LS QNI+ISFFI GIFLLTTVGCIYINEAMV IPLVSASQL RNVNKFSLW  SNLPLRVNQAGVMPLVFTSSVMVILSSL N +YG
Sbjct:   39 DIKTFSPLLESNTSTTAVASILNSFSGGENASFSILSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIESIVTTYSFRPLIFNWNVLVLIQLSLTLIAGSMIILWFSELITKDGIGNGSSILICFNIVSNFPDQLRAMILALSNQNIIISFFIGGIFLLTTVGCIYINEAMVKIPLVSASQLLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMVILSSLANLIYG 287          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: D1J735_ECTSI (Protein translocase subunit SecY n=7 Tax=Ectocarpales TaxID=2877 RepID=D1J735_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 2.550e-144
Identity = 227/249 (91.16%), Postives = 237/249 (95.18%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            D KTFSPL E NTSTTAVA+ILNSFSGGGNASFSILSLGILPNINASIIIQLLTTI+P+LLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFR LIFNWNILVL  ISLTL++GSMIILWFSELITK GIGNGTSILICFNIVSNFPDQLR+MILVLSKQNI+IS FISGIFLLTT+GCIYINEA+V IPLVSASQL RNVNKFSLW +SNLPLRVNQAGVMPLVFTSSVMVILSSLT FLYG
Sbjct:   40 DTKTFSPLLEPNTSTTAVATILNSFSGGGNASFSILSLGILPNINASIIIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRSLIFNWNILVLTQISLTLMSGSMIILWFSELITKKGIGNGTSILICFNIVSNFPDQLRSMILVLSKQNIIISLFISGIFLLTTIGCIYINEAIVKIPLVSASQLLRNVNKFSLWNQSNLPLRVNQAGVMPLVFTSSVMVILSSLTTFLYG 288          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A6B7EV55_9PHAE (Preprotein translocase secY subunit n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV55_9PHAE)

HSP 1 Score: 405 bits (1041), Expect = 1.020e-138
Identity = 219/249 (87.95%), Postives = 231/249 (92.77%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            DIKTFSP+ + NTSTT V+SILN FSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIAS+V TYSFRPLIFNWN +VL  ISLTL+AGSMI+LWFSELITKDGIGNGTSILICFNIVSNFP+QL ++  VLSKQNILIS FISGIFLLTTVGCIYIN+A+V I LVSASQLSRNVNK  LW ES LPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG
Sbjct:   39 DIKTFSPVLDPNTSTTTVSSILNRFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASVVATYSFRPLIFNWNSMVLTQISLTLMAGSMILLWFSELITKDGIGNGTSILICFNIVSNFPEQLGSIFSVLSKQNILISVFISGIFLLTTVGCIYINDAIVTIQLVSASQLSRNVNKLGLWNESKLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 287          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A1I9LVB7_9PHAE (Protein translocase subunit SecY n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVB7_9PHAE)

HSP 1 Score: 394 bits (1013), Expect = 1.880e-134
Identity = 212/249 (85.14%), Postives = 228/249 (91.57%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            D KTFSPL E NTSTTAVA+ILNSFSGGGNASFSILSLGILPNINASIIIQL TTI+P+LLKLQKEEG YGRRKLTDYTRYLT FCSI+AS++ TYSFRPLIFNWNILVL  ISLTLIAGSMIILWFSELITK+GIGNGTSILICFNIVSNFP QLR++I+VLSKQNI I+  ISGIFLLTTVGCIYINEA+V IPLV+A+QL RN+N F LW ES LPLRVNQAGVMPLVFTSS+MVILSS T FLYG
Sbjct:   40 DTKTFSPLLEPNTSTTAVATILNSFSGGGNASFSILSLGILPNINASIIIQLFTTINPALLKLQKEEGGYGRRKLTDYTRYLTLFCSIVASVIATYSFRPLIFNWNILVLTQISLTLIAGSMIILWFSELITKNGIGNGTSILICFNIVSNFPAQLRSIIVVLSKQNIAITILISGIFLLTTVGCIYINEAIVKIPLVTATQLLRNINNFWLWNESILPLRVNQAGVMPLVFTSSIMVILSSFTTFLYG 288          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A8F0JZQ7_9PHAE (Preprotein translocase subunit secY n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0JZQ7_9PHAE)

HSP 1 Score: 393 bits (1010), Expect = 5.180e-134
Identity = 209/249 (83.94%), Postives = 226/249 (90.76%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            D KTFSPL E NTSTT VA ILN+FSGG NASFSILSLGILPNINASI+IQLLTTI+P+LLKLQKEEGEYGRRKLTDYTRYLTFFC+II S++T YSF+PLIFNWN+ +L  IS TLIAGSMIILWFSELITK GIGNG+SILICFNIVSNFPDQLRA+IL LS QNILISFFI+GIFLLTT+GCIYINEAMV IPLVSASQL RNVNK SLW +SNLPLRVNQAGVMPLVFTSSVMVI SS+   +YG
Sbjct:   39 DTKTFSPLLEPNTSTTLVAGILNNFSGGSNASFSILSLGILPNINASILIQLLTTINPTLLKLQKEEGEYGRRKLTDYTRYLTFFCAIIESVITAYSFQPLIFNWNVFILIQISSTLIAGSMIILWFSELITKAGIGNGSSILICFNIVSNFPDQLRAIILALSTQNILISFFIAGIFLLTTIGCIYINEAMVKIPLVSASQLLRNVNKLSLWSDSNLPLRVNQAGVMPLVFTSSVMVIFSSVAKLIYG 287          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A8F0JZP1_9PHAE (Preprotein translocase subunit secY n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZP1_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 3.220e-130
Identity = 204/249 (81.93%), Postives = 226/249 (90.76%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            DIKTFSPL E+N STTAVA+ILNSFSGG N+SFSILSLGILPNINASIIIQLLTTI+P+LLKLQKEEGEYGRRK+TDYTRYLTF C+II S+VT YSFR LIFNWN LVLA ISL+LIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQ++AM L L+ QNIL+SF I GIFLLTT+GC+YINEAMVNIPLVSASQL R  +K +LW  SNLPLRVNQ+GVMPLVFTSSVMV++SS++  LY 
Sbjct:   39 DIKTFSPLLETNNSTTAVATILNSFSGGQNSSFSILSLGILPNINASIIIQLLTTINPALLKLQKEEGEYGRRKITDYTRYLTFLCAIIESVVTAYSFRSLIFNWNFLVLAQISLSLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQIKAMALALTNQNILLSFLIGGIFLLTTIGCVYINEAMVNIPLVSASQLLRKPSKLTLWNISNLPLRVNQSGVMPLVFTSSVMVVVSSVSKLLYA 287          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: D1GJR5_FUCVE (Protein translocase subunit SecY n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJR5_FUCVE)

HSP 1 Score: 378 bits (970), Expect = 6.060e-128
Identity = 199/247 (80.57%), Postives = 224/247 (90.69%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFL 741
            DIKTFSPL +SN ST  +A+ILN+FSGGGNASFSI SLGILPNINASIIIQLLTTI+P+LLKLQK+EGEYGRRKL DYTRYLTFFC++I S+VTTYSF+PLIFNW++LV   I+L+LI G+MIILWFSELITK GIGNG+SILICFNIVSNFPDQL+AM + LS QNI ISFF+ GIFL+TT+GCIYINEA+V IPLVSASQL RNVNKFSLW  SNLPLRVNQAGVMPLVFTSSVMVIL+S+T  L
Sbjct:   39 DIKTFSPLLQSNNSTXXIAAILNNFSGGGNASFSIFSLGILPNINASIIIQLLTTINPTLLKLQKDEGEYGRRKLIDYTRYLTFFCAVIESLVTTYSFKPLIFNWDLLVFTQITLSLITGTMIILWFSELITKYGIGNGSSILICFNIVSNFPDQLKAMAVGLSNQNIFISFFVGGIFLVTTIGCIYINEAVVKIPLVSASQLLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMVILTSITKLL 285          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A141BSM4_9PHAE (Protein translocase subunit SecY n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSM4_9PHAE)

HSP 1 Score: 373 bits (958), Expect = 3.870e-126
Identity = 200/249 (80.32%), Postives = 221/249 (88.76%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            DI TFSPL  SN STTA+A+ILN+FSGGGNASFSILSLGILPNINASI IQLLTTI+P+LLKLQK EGEYGRRKL DYTRYLTFF ++I  I+TTYSFR LIFNWNILVL  ISL+LI G+MIILWFSELITK GIGNG+SILICFNIVSNFPDQLR + L LS ++I I FF+S IFLLTTVGCIYINEA+V +PLVSASQL RNVNKFSLW  SNLPLRVNQAGVMPLVFTSSVMV+L+S+T FL+ 
Sbjct:   38 DINTFSPLVGSNNSTTAIATILNNFSGGGNASFSILSLGILPNINASIFIQLLTTINPTLLKLQKNEGEYGRRKLIDYTRYLTFFFAVIEGIITTYSFRSLIFNWNILVLIQISLSLITGTMIILWFSELITKYGIGNGSSILICFNIVSNFPDQLRTIALNLSNKSIFIGFFVSSIFLLTTVGCIYINEAVVKVPLVSASQLLRNVNKFSLWNNSNLPLRVNQAGVMPLVFTSSVMVLLTSITKFLFS 286          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A8E5XRJ3_9PHAE (Protein translocase subunit SecY n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRJ3_9PHAE)

HSP 1 Score: 359 bits (922), Expect = 1.040e-120
Identity = 194/250 (77.60%), Postives = 220/250 (88.00%), Query Frame = 1
Query:    1 DIKTFSPLSES-NTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            D+KTFS L ES N+STTAVA+ILNSFSGGG ASFSILSLGILP INASIIIQLLTTI+PSLLKLQK+EGEYGRRKLTDYTRYLTFFC+ I S++TTYSFR LIFNWN   +  ISLTL+ GSMIILWFSELITK G+GNG S+LICFNIVSNFP+QL+AMI+ L+ QN+LI+  ++ IFLLTTVGCIYINEA V IPL+SASQL + ++K SLW  SNLPLRVNQ+GVMPLVFTSSVMVILSSLT  +YG
Sbjct:   39 DLKTFSTLLESKNSSTTAVAAILNSFSGGGTASFSILSLGILPYINASIIIQLLTTINPSLLKLQKDEGEYGRRKLTDYTRYLTFFCAAIESLLTTYSFRSLIFNWNFFSVLQISLTLVTGSMIILWFSELITKKGVGNGASLLICFNIVSNFPNQLKAMIVTLTNQNLLIAILLNVIFLLTTVGCIYINEATVRIPLISASQLLKKLSKTSLWNRSNLPLRVNQSGVMPLVFTSSVMVILSSLTKLIYG 288          
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Match: A0A8F0F797_9PHAE (Preprotein translocase subunit secY n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F797_9PHAE)

HSP 1 Score: 354 bits (908), Expect = 1.510e-118
Identity = 188/249 (75.50%), Postives = 214/249 (85.94%), Query Frame = 1
Query:    1 DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIIIQLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRPLIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVSNFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSASQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG 747
            DIKTFSP   +N STTA+A+ILN+FSGGG +S  +LSLGILPNINASII+QLLT +SPSLLKLQKEEGEYGRRKLTDYTRYLTFFC+++ SIVTTYSFR LIFNWN +VL  ISL+LI GSMIILWFSE+ITKDG+GNG+S+LICFNIVSNFPDQ++AM L L   N  I   + GIFLLTTVGCI INEA+V IPLVSASQL R ++K SLW  SNLPLR+NQAGVMPLVFTSSVM+ILSS T  +YG
Sbjct:   39 DIKTFSPELGANNSTTAIATILNTFSGGGTSSVGLLSLGILPNINASIILQLLTQVSPSLLKLQKEEGEYGRRKLTDYTRYLTFFCALVESIVTTYSFRSLIFNWNFIVLTQISLSLITGSMIILWFSEVITKDGVGNGSSLLICFNIVSNFPDQIKAMALGLVNTNSSIILLLGGIFLLTTVGCICINEAIVKIPLVSASQLLRKLSKTSLWDSSNLPLRINQAGVMPLVFTSSVMIILSSATKLIYG 287          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0R6LUW4_UNDPI1.230e-14491.16Protein translocase subunit SecY n=28 Tax=Laminari... [more]
D1J735_ECTSI2.550e-14491.16Protein translocase subunit SecY n=7 Tax=Ectocarpa... [more]
A0A6B7EV55_9PHAE1.020e-13887.95Preprotein translocase secY subunit n=1 Tax=Clados... [more]
A0A1I9LVB7_9PHAE1.880e-13485.14Protein translocase subunit SecY n=1 Tax=Pleurocla... [more]
A0A8F0JZQ7_9PHAE5.180e-13483.94Preprotein translocase subunit secY n=1 Tax=Chorda... [more]
A0A8F0JZP1_9PHAE3.220e-13081.93Preprotein translocase subunit secY n=1 Tax=Desmar... [more]
D1GJR5_FUCVE6.060e-12880.57Protein translocase subunit SecY n=3 Tax=Fucaceae ... [more]
A0A141BSM4_9PHAE3.870e-12680.32Protein translocase subunit SecY n=14 Tax=Sargassa... [more]
A0A8E5XRJ3_9PHAE1.040e-12077.60Protein translocase subunit SecY n=1 Tax=Ishige ok... [more]
A0A8F0F797_9PHAE1.510e-11875.50Preprotein translocase subunit secY n=1 Tax=Protoh... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:52722..53469 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score419.5
Seed ortholog evalue1.1e-114
Seed eggNOG ortholog2880.D1J735
Preferred namesecY
KEGG koko:K10956
KEGG TC3.A.5.4,3.A.5.8,3.A.5.9
KEGG Pathwayko03060,ko04141,ko04145,ko05110,map03060,map04141,map04145,map05110
KEGG ModuleM00401
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006996,GO:0008150,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009657,GO:0009668,GO:0009987,GO:0010027,GO:0016020,GO:0016043,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0061024,GO:0071840
EggNOG free text desc.protein transport
EggNOG OGs2QSNV@2759,COG0201@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02044
Hectar predicted targeting categoryother localisation
Exons1
Model size749
Cds size747
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817299.8437018-CDS-P-fluviatile_contig89:52721..534681622817299.8437018-CDS-P-fluviatile_contig89:52721..53468Porterinema fluviatile SAG_2381CDSP-fluviatile_contig89 52722..53468 +
1693571985.1786778-CDS-P-fluviatile_contig89:52721..534681693571985.1786778-CDS-P-fluviatile_contig89:52721..53468Porterinema fluviatile SAG_2381CDSP-fluviatile_contig89 52722..53468 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14967.1prot_P-fluviatile_contig89.14967.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig89 52722..53468 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig89.14967.1

>prot_P-fluviatile_contig89.14967.1 ID=prot_P-fluviatile_contig89.14967.1|Name=mRNA_P-fluviatile_contig89.14967.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=249bp
DIKTFSPLSESNTSTTAVASILNSFSGGGNASFSILSLGILPNINASIII
QLLTTISPSLLKLQKEEGEYGRRKLTDYTRYLTFFCSIIASIVTTYSFRP
LIFNWNILVLAHISLTLIAGSMIILWFSELITKDGIGNGTSILICFNIVS
NFPDQLRAMILVLSKQNILISFFISGIFLLTTVGCIYINEAMVNIPLVSA
SQLSRNVNKFSLWGESNLPLRVNQAGVMPLVFTSSVMVILSSLTNFLYG
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mRNA from alignment at P-fluviatile_contig89:52722..53469+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig89.14967.1 ID=mRNA_P-fluviatile_contig89.14967.1|Name=mRNA_P-fluviatile_contig89.14967.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=748bp|location=Sequence derived from alignment at P-fluviatile_contig89:52722..53469+ (Porterinema fluviatile SAG_2381)
GATATAAAAACTTTTTCTCCTCTGTCAGAATCAAATACTTCAACAACAGC TGTCGCATCAATTTTAAATAGTTTTTCTGGGGGAGGGAATGCTTCTTTTA GTATCTTAAGTCTTGGGATTTTACCTAATATAAATGCTTCCATAATAATT CAACTGCTAACAACAATTAGCCCAAGTCTTTTAAAGTTACAAAAAGAAGA AGGTGAGTATGGGCGACGTAAACTAACTGACTATACTAGATACTTAACTT TTTTTTGTTCTATTATTGCAAGTATAGTTACCACGTATAGTTTTCGTCCA TTAATTTTTAATTGGAATATTTTAGTTTTAGCACACATAAGCTTAACTTT AATAGCAGGCTCAATGATTATATTATGGTTTAGTGAATTAATAACTAAAG ATGGAATTGGTAATGGTACCTCAATTTTAATTTGTTTTAATATTGTTTCG AATTTTCCTGATCAACTTCGAGCTATGATTTTAGTTTTGTCAAAACAAAA CATTTTAATTAGTTTTTTTATTAGCGGGATATTTTTATTAACAACAGTGG GATGTATTTATATAAATGAAGCAATGGTAAATATTCCATTGGTCTCAGCA AGTCAATTATCAAGAAATGTTAACAAATTTTCATTATGGGGTGAGAGTAA TTTACCTCTTCGAGTTAATCAAGCAGGTGTAATGCCTTTAGTATTTACAT CATCCGTTATGGTAATTTTATCGTCTCTTACAAATTTTCTATACGGTC
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Coding sequence (CDS) from alignment at P-fluviatile_contig89:52722..53469+

>mRNA_P-fluviatile_contig89.14967.1 ID=mRNA_P-fluviatile_contig89.14967.1|Name=mRNA_P-fluviatile_contig89.14967.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1494bp|location=Sequence derived from alignment at P-fluviatile_contig89:52722..53469+ (Porterinema fluviatile SAG_2381)
GATATAAAAACTTTTTCTCCTCTGTCAGAATCAAATACTTCAACAACAGC
TGTCGCATCAATTTTAAATAGTTTTTCTGGGGGAGGGAATGCTTCTTTTA
GTATCTTAAGTCTTGGGATTTTACCTAATATAAATGCTTCCATAATAATT
CAACTGCTAACAACAATTAGCCCAAGTCTTTTAAAGTTACAAAAAGAAGA
AGGTGAGTATGGGCGACGTAAACTAACTGACTATACTAGATACTTAACTT
TTTTTTGTTCTATTATTGCAAGTATAGTTACCACGTATAGTTTTCGTCCA
TTAATTTTTAATTGGAATATTTTAGTTTTAGCACACATAAGCTTAACTTT
AATAGCAGGCTCAATGATTATATTATGGTTTAGTGAATTAATAACTAAAG
ATGGAATTGGTAATGGTACCTCAATTTTAATTTGTTTTAATATTGTTTCG
AATTTTCCTGATCAACTTCGAGCTATGATTTTAGTTTTGTCAAAACAAAA
CATTTTAATTAGTTTTTTTATTAGCGGGATATTTTTATTAACAACAGTGG
GATGTATTTATATAAATGAAGCAATGGTAAATATTCCATTGGTCTCAGCA
AGTCAATTATCAAGAAATGTTAACAAATTTTCATTATGGGGTGAGAGTAA
TTTACCTCTTCGAGTTAATCAAGCAGGTGTAATGCCTTTAGTATTTACAT
CATCCGTTATGGTAATTTTATCGTCTCTTACAAATTTTCTATACGGTGAT
ATAAAAACTTTTTCTCCTCTGTCAGAATCAAATACTTCAACAACAGCTGT
CGCATCAATTTTAAATAGTTTTTCTGGGGGAGGGAATGCTTCTTTTAGTA
TCTTAAGTCTTGGGATTTTACCTAATATAAATGCTTCCATAATAATTCAA
CTGCTAACAACAATTAGCCCAAGTCTTTTAAAGTTACAAAAAGAAGAAGG
TGAGTATGGGCGACGTAAACTAACTGACTATACTAGATACTTAACTTTTT
TTTGTTCTATTATTGCAAGTATAGTTACCACGTATAGTTTTCGTCCATTA
ATTTTTAATTGGAATATTTTAGTTTTAGCACACATAAGCTTAACTTTAAT
AGCAGGCTCAATGATTATATTATGGTTTAGTGAATTAATAACTAAAGATG
GAATTGGTAATGGTACCTCAATTTTAATTTGTTTTAATATTGTTTCGAAT
TTTCCTGATCAACTTCGAGCTATGATTTTAGTTTTGTCAAAACAAAACAT
TTTAATTAGTTTTTTTATTAGCGGGATATTTTTATTAACAACAGTGGGAT
GTATTTATATAAATGAAGCAATGGTAAATATTCCATTGGTCTCAGCAAGT
CAATTATCAAGAAATGTTAACAAATTTTCATTATGGGGTGAGAGTAATTT
ACCTCTTCGAGTTAATCAAGCAGGTGTAATGCCTTTAGTATTTACATCAT
CCGTTATGGTAATTTTATCGTCTCTTACAAATTTTCTATACGGT
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