mRNA_P-fluviatile_contig89.14955.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: A0A0R6LUT6_UNDPI (CfxQ-like protein n=37 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6LUT6_UNDPI) HSP 1 Score: 233 bits (593), Expect = 1.840e-74 Identity = 119/122 (97.54%), Postives = 121/122 (99.18%), Query Frame = 1
Query: 58 KNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
K+LENLSLEKNLNLKQVYLDTQIKTIIDIL EELVGL+PVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 5 KSLENLSLEKNLNLKQVYLDTQIKTIIDILEEELVGLIPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 126
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: A0A8E5XRP4_9PHAE (Rubisco expression protein n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRP4_9PHAE) HSP 1 Score: 222 bits (565), Expect = 3.300e-70 Identity = 112/124 (90.32%), Postives = 122/124 (98.39%), Query Frame = 1
Query: 52 LTKNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
L N+++LS+EK+LNLKQVYLDTQIKTIIDILN+ELVGL+PVKTRIQEI+ALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLG+SKKGHLLTVTRDDLVGQ+IGHTAPK
Sbjct: 4 LKTNIQHLSVEKSLNLKQVYLDTQIKTIIDILNQELVGLLPVKTRIQEIAALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGYSKKGHLLTVTRDDLVGQFIGHTAPK 127
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: A0A2I4Q2G3_9PHAE (CfxQ protein-like protein n=2 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I4Q2G3_9PHAE) HSP 1 Score: 219 bits (558), Expect = 3.470e-69 Identity = 110/121 (90.91%), Postives = 117/121 (96.69%), Query Frame = 1
Query: 61 NLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
NL+ L+ EKNLNLKQVYLDT+IK IIDILNEELVGL+PVKTRIQEISALL+IDKLR+NLG TTGNPGLHMSFTGSPGTGKTTVATRM+DILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 5 NLDTLAPEKNLNLKQVYLDTEIKNIIDILNEELVGLIPVKTRIQEISALLIIDKLRKNLGLTTGNPGLHMSFTGSPGTGKTTVATRMSDILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 125
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: A0A1L2F1Z1_9PHAE (Cbbx n=16 Tax=Fucales TaxID=3009 RepID=A0A1L2F1Z1_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.750e-67 Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 1
Query: 58 KNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
K LE LS +KNLNLKQVYLDTQI+ IIDILN+ELVGL PVK RIQEISALLVIDKLR+NLGFT GNPGLHMSFTGSPGTGKTTVATRM DILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 5 KKLETLSQDKNLNLKQVYLDTQIQKIIDILNQELVGLKPVKKRIQEISALLVIDKLRQNLGFTVGNPGLHMSFTGSPGTGKTTVATRMGDILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 126
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: A0A7S6U9U8_9STRA (CbbX n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9U8_9STRA) HSP 1 Score: 201 bits (512), Expect = 3.350e-62 Identity = 101/122 (82.79%), Postives = 113/122 (92.62%), Query Frame = 1
Query: 58 KNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
+N E LSLEKNLNLKQVY +TQI+ +ID+L++ELVGLVPVKTRIQEI+ALLVIDKLR+NLGF T +PGLHMSFTGSPGTGKTTVA RMADIL+KLG+ KGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 4 QNFETLSLEKNLNLKQVYSNTQIQLVIDLLDQELVGLVPVKTRIQEIAALLVIDKLRDNLGFNTSSPGLHMSFTGSPGTGKTTVALRMADILYKLGYCSKGHLLTVTRDDLVGQYIGHTAPK 125
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: A0A0K1IJF1_9STRA (Putative rubisco expression protein CfxQ n=2 Tax=Xanthophyceae TaxID=2833 RepID=A0A0K1IJF1_9STRA) HSP 1 Score: 182 bits (461), Expect = 1.630e-54 Identity = 94/126 (74.60%), Postives = 110/126 (87.30%), Query Frame = 1
Query: 46 VGLTKNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
+ + NLE LS K+LNLKQ Y DTQI+ +IDIL EELVGLVPVK+RI+EI+ALLVID+LR+ + T+ +PGLHMSFTGSPGTGKTTVA RMADIL+KLG+ +KGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 1 MSIPGNLE-LSTTKSLNLKQEYKDTQIQRVIDILEEELVGLVPVKSRIREIAALLVIDRLRKKVNLTSNSPGLHMSFTGSPGTGKTTVALRMADILYKLGYCRKGHLLTVTRDDLVGQYIGHTAPK 125
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: B7T200_VAULI (CfxQ-like protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T200_VAULI) HSP 1 Score: 174 bits (440), Expect = 2.380e-51 Identity = 89/122 (72.95%), Postives = 109/122 (89.34%), Query Frame = 1
Query: 58 KNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
+NLE LS K+L+LKQ Y +T+I+ +IDIL EELVGL+PVKTRI+EI+ALL+ID+LR+ + T+ +PGL+MSFTGSPGTGKTTVA RMADIL+KLG+ KKGH+LTVTRDDLVGQYIGHTAPK
Sbjct: 5 RNLE-LSTIKSLSLKQEYENTKIQRVIDILEEELVGLIPVKTRIREIAALLIIDRLRKKVDLTSNSPGLNMSFTGSPGTGKTTVALRMADILYKLGYCKKGHMLTVTRDDLVGQYIGHTAPK 125
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: CFXQ_TRICV (Protein CfxQ homolog n=23 Tax=cellular organisms TaxID=131567 RepID=CFXQ_TRICV) HSP 1 Score: 173 bits (439), Expect = 2.710e-51 Identity = 85/116 (73.28%), Postives = 105/116 (90.52%), Query Frame = 1
Query: 76 SLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
S++ ++NL++ Y T+I I+++LNEELVGLVPVK+RI+EI+ALL+IDKLR+NLG T G+PGLHMSFTGSPGTGKTTV +M+DILF+LG+ KKGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 3 SMDTSVNLQEEYNKTEIAKILNLLNEELVGLVPVKSRIREIAALLLIDKLRKNLGITAGSPGLHMSFTGSPGTGKTTVGLKMSDILFQLGYIKKGHLLTVTRDDLVGQYIGHTAPK 118
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: UPI001FCD0825 (putative rubisco expression protein n=1 Tax=Pulvinaster venetus TaxID=427767 RepID=UPI001FCD0825) HSP 1 Score: 173 bits (438), Expect = 4.520e-51 Identity = 85/120 (70.83%), Postives = 106/120 (88.33%), Query Frame = 1
Query: 64 LENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
L+N S + +NL++ Y TQI+ ++D LNEEL+GLVPVKTRI+EI+ALL+ID+LR+++G +G+PGLHMSFTGSPGTGKTTVA +MADIL +LG+ KKGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 4 LDNFSNDTLVNLREEYYKTQIQDVLDRLNEELIGLVPVKTRIREIAALLLIDRLRKSVGLVSGSPGLHMSFTGSPGTGKTTVALKMADILHRLGYIKKGHLLTVTRDDLVGQYIGHTAPK 123
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Match: UPI001FCD72B0 (putative rubisco expression protein n=1 Tax=Rhodella violacea TaxID=2801 RepID=UPI001FCD72B0) HSP 1 Score: 171 bits (432), Expect = 2.990e-50 Identity = 83/111 (74.77%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 91 LNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIQEISALLVIDKLRENLGFTTGNPGLHMSFTGSPGTGKTTVATRMADILFKLGHSKKGHLLTVTRDDLVGQYIGHTAPK 423
+NL++ Y TQI++I+D LN++L+GLVPVKTRI+EI+ALL+ID+LR+ LG +GNPGLHMSFTGSPGTGKTTVA +MADIL++LG+ KKGHLLTVTRDDLVGQYIGHTAPK
Sbjct: 6 INLQEEYNKTQIQSILDQLNKDLIGLVPVKTRIREIAALLLIDRLRKQLGMVSGNPGLHMSFTGSPGTGKTTVAMKMADILYRLGYIKKGHLLTVTRDDLVGQYIGHTAPK 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14955.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig89.14955.1 >prot_P-fluviatile_contig89.14955.1 ID=prot_P-fluviatile_contig89.14955.1|Name=mRNA_P-fluviatile_contig89.14955.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=128bp MEVGLTKNLENLSLEKNLNLKQVYLDTQIKTIIDILNEELVGLVPVKTRIback to top mRNA from alignment at P-fluviatile_contig89:30392..30814+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig89.14955.1 ID=mRNA_P-fluviatile_contig89.14955.1|Name=mRNA_P-fluviatile_contig89.14955.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=423bp|location=Sequence derived from alignment at P-fluviatile_contig89:30392..30814+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig89:30392..30814+ >mRNA_P-fluviatile_contig89.14955.1 ID=mRNA_P-fluviatile_contig89.14955.1|Name=mRNA_P-fluviatile_contig89.14955.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=768bp|location=Sequence derived from alignment at P-fluviatile_contig89:30392..30814+ (Porterinema fluviatile SAG_2381)back to top |