mRNA_P-fluviatile_contig89.14945.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig89.14945.1
Unique NamemRNA_P-fluviatile_contig89.14945.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: D1J798_ECTSI (Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 RepID=D1J798_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 1.330e-153
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: CYB6_THAPS (Cytochrome b6 n=103 Tax=cellular organisms TaxID=131567 RepID=CYB6_THAPS)

HSP 1 Score: 410 bits (1053), Expect = 4.890e-142
Identity = 193/215 (89.77%), Postives = 206/215 (95.81%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            MGKVYDWFEERLE+Q+IADDI+SKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPS+ +AF+SVEYIMT VNFGWLIRSIHRWSASMMV+ML+LHVFRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQVGFWACKIVTGVP AVP++GPP+V +LRGG SVGQSTLTRFYSAHTFVLPL AA LM+THFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEVQAIADDISSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSVVDAFASVEYIMTSVNFGWLIRSIHRWSASMMVMMLVLHVFRVYLTGGFKKPRELTWVTGVILAVVTVSFGVTGYSLPWDQVGFWACKIVTGVPAAVPIVGPPLVLVLRGGESVGQSTLTRFYSAHTFVLPLAAAVLMLTHFLMIRKQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: J9QUX6_9STRA (Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 RepID=J9QUX6_9STRA)

HSP 1 Score: 409 bits (1051), Expect = 9.840e-142
Identity = 194/215 (90.23%), Postives = 207/215 (96.28%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            M KVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRP++S+AF+SVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGV L   T SFGVTGYSLPWDQVGFWACKIVTGVP+++PV+GP +V +LRGGVSVGQSTLTRFYSAHTFVLP+VAAALM+THFLMIR+QGISGPL
Sbjct:    1 MSKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPTVSDAFASVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVLLGAVTASFGVTGYSLPWDQVGFWACKIVTGVPDSIPVVGPLLVGVLRGGVSVGQSTLTRFYSAHTFVLPVVAAALMLTHFLMIRQQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: A0A0D3M5L9_9STRA (Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 RepID=A0A0D3M5L9_9STRA)

HSP 1 Score: 405 bits (1042), Expect = 2.300e-140
Identity = 189/215 (87.91%), Postives = 207/215 (96.28%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYCFGGI  TCFL+QVATGFAMTFYYRP++++AF+SVEY+MTE NFGWLIRSIHRWSASMMVLM+ILHVFRVYLTGGFK+PRELTWVTGV L+V TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+PVIG P+V+LLRGGVSVGQ+TLTRFYS HTFVLPL+AA LM+THFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCFGGITLTCFLIQVATGFAMTFYYRPTVTDAFASVEYLMTEANFGWLIRSIHRWSASMMVLMMILHVFRVYLTGGFKRPRELTWVTGVLLSVITVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVIGSPLVELLRGGVSVGQATLTRFYSLHTFVLPLLAAVLMLTHFLMIRKQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: CYB6_GUITH (Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=CYB6_GUITH)

HSP 1 Score: 403 bits (1036), Expect = 1.880e-139
Identity = 188/215 (87.44%), Postives = 206/215 (95.81%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI FTCF++QVATGFAMTFYYRP+++EAF+SVEYIMTEVN+GWL RS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGVTLAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEA+PV+G  +V+LLRG VSVGQ+TLTRFYSAHTFVLP+ AA LM+THFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGITFTCFIIQVATGFAMTFYYRPTVAEAFASVEYIMTEVNYGWLFRSMHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVTLAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAIPVVGSLLVELLRGSVSVGQATLTRFYSAHTFVLPVAAAVLMLTHFLMIRKQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: A0A516ZA38_9STRA (Cytochrome b6 n=4 Tax=Dictyochophyceae TaxID=39119 RepID=A0A516ZA38_9STRA)

HSP 1 Score: 402 bits (1033), Expect = 7.990e-139
Identity = 187/218 (85.78%), Postives = 205/218 (94.04%), Query Frame = 2
Query:  110 VLFMGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            + FM KVYDWFEERLE+Q+IADDITSKYVPPHVNIFYCFGGIV TCFLVQVATGFAMT YYRP++ EAF+SVEYIMT+VNFGWLIRSIHRWSASMMV+M++LHVFRVYLTGGFKKPRELTW+TGV LAV TVSFGVTGYSLPWDQVG+WACKIVTGVPEAVPV+G  ++ LLRGGVSVGQSTLTRFYSAHTF+LP+ A  LM+THFLMIRKQGISGPL
Sbjct:    9 ITFMSKVYDWFEERLEVQAIADDITSKYVPPHVNIFYCFGGIVLTCFLVQVATGFAMTVYYRPTVVEAFASVEYIMTQVNFGWLIRSIHRWSASMMVMMMVLHVFRVYLTGGFKKPRELTWITGVILAVVTVSFGVTGYSLPWDQVGYWACKIVTGVPEAVPVVGTTVLYLLRGGVSVGQSTLTRFYSAHTFILPVAAVVLMLTHFLMIRKQGISGPL 226          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: CYB6_GRATL (Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID=CYB6_GRATL)

HSP 1 Score: 395 bits (1016), Expect = 2.070e-136
Identity = 188/215 (87.44%), Postives = 203/215 (94.42%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            MGKVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGIVFT FL+QVA+GFAMTFYYRP+++EAFSSVEYIMT+VNFGWLIRSIHRWSASMMVLMLILH+FRVYLTGGFKKPRELTWVTGV LAV TVSFGVTGYSLPWDQ+G+WA KIVTGVPEA+PV+G  IV+LLRGGVSVGQSTLTRFYS HTFVLPL+ A  M+ HFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCIGGIVFTSFLIQVASGFAMTFYYRPTVAEAFSSVEYIMTDVNFGWLIRSIHRWSASMMVLMLILHMFRVYLTGGFKKPRELTWVTGVILAVLTVSFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVVGGSIVELLRGGVSVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: W0RYI6_PORPP (Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=W0RYI6_PORPP)

HSP 1 Score: 394 bits (1013), Expect = 5.930e-136
Identity = 186/215 (86.51%), Postives = 203/215 (94.42%), Query Frame = 2
Query:  119 MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            MGKVYDWF+ERLEIQ+IADDITSKYVPPHVNIFYCFGGIV TCF++QVA+GFAMTFYYRPS++EAFSSV YIMT+VNFGWLIRSIHRWSASMMVLM+ILH FRVYLTGGFK PRELTWVTGVTLAV TVSFGVTGYSLPWDQVGFWA KIVTGVPEA+PV+G  +V+LLRGGVSVGQ+TLTRFYS HTFVLPL+ A +M+ HFLMIRKQGISGPL
Sbjct:    1 MGKVYDWFQERLEIQAIADDITSKYVPPHVNIFYCFGGIVLTCFIMQVASGFAMTFYYRPSVAEAFSSVSYIMTDVNFGWLIRSIHRWSASMMVLMMILHSFRVYLTGGFKTPRELTWVTGVTLAVLTVSFGVTGYSLPWDQVGFWAVKIVTGVPEAIPVVGSSLVELLRGGVSVGQTTLTRFYSLHTFVLPLLTAVVMLMHFLMIRKQGISGPL 215          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: A0A5C7GQ13_9ROSI (Cytochrome b6 n=135 Tax=Sapindales TaxID=41937 RepID=A0A5C7GQ13_9ROSI)

HSP 1 Score: 394 bits (1013), Expect = 4.850e-135
Identity = 183/221 (82.81%), Postives = 201/221 (90.95%), Query Frame = 2
Query:  101 NKWVLFMGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            + W  ++ KVYDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI  TCFLVQVATGFAMTFYYRP+++EAF+SV+YIMTE NFGWLIRS+HRWSASMMVLM+ILHVFRVYLTGGFKKPRELTWVTGV LAV T SFGVTGYSLPWDQ+G+WA KIVTGVPEA+PVIG P+V+LLRG  SVGQSTLTRFYS HTFVLPL+ A  M+ HFLMIRKQGISGPL
Sbjct:   54 SPWFTYLNKVYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMIILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 274          
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Match: A0A0C5APY6_CANSA (Cytochrome b6 n=3 Tax=Cannabis sativa TaxID=3483 RepID=A0A0C5APY6_CANSA)

HSP 1 Score: 392 bits (1007), Expect = 8.900e-135
Identity = 180/219 (82.19%), Postives = 201/219 (91.78%), Query Frame = 2
Query:  107 WVLFMGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVATGFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILHVFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKIVTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMITHFLMIRKQGISGPL 763
            W+ ++ K+YDWFEERLEIQ+IADDITSKYVPPHVNIFYC GGI  TCFLVQVATGFAMTFYYRP+++EAF+SV+YIMTEVNFGWLIRS+HRWSASMMVLM+ILHVFRVYLTGGFK+PRELTWVTGV L V T SFGVTGYSLPWDQ+G+WA KIVTGVP+A+PVIG P+V+LLRG  SVGQSTLTRFYS HTFVLPL+ A  M+ HFLMIRKQGISGPL
Sbjct:   14 WLTYLNKIYDWFEERLEIQAIADDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVAEAFTSVQYIMTEVNFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKRPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 232          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig89.14945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J798_ECTSI1.330e-153100.00Cytochrome b6 n=62 Tax=Stramenopiles TaxID=33634 R... [more]
CYB6_THAPS4.890e-14289.77Cytochrome b6 n=103 Tax=cellular organisms TaxID=1... [more]
J9QUX6_9STRA9.840e-14290.23Cytochrome b6 n=2 Tax=Pelagomonadales TaxID=54409 ... [more]
A0A0D3M5L9_9STRA2.300e-14087.91Cytochrome b6 n=19 Tax=Ochrophyta TaxID=2696291 Re... [more]
CYB6_GUITH1.880e-13987.44Cytochrome b6 n=13 Tax=Eukaryota TaxID=2759 RepID=... [more]
A0A516ZA38_9STRA7.990e-13985.78Cytochrome b6 n=4 Tax=Dictyochophyceae TaxID=39119... [more]
CYB6_GRATL2.070e-13687.44Cytochrome b6 n=171 Tax=Eukaryota TaxID=2759 RepID... [more]
W0RYI6_PORPP5.930e-13686.51Cytochrome b6 n=17 Tax=Eukaryota TaxID=2759 RepID=... [more]
A0A5C7GQ13_9ROSI4.850e-13582.81Cytochrome b6 n=135 Tax=Sapindales TaxID=41937 Rep... [more]
A0A0C5APY6_CANSA8.900e-13582.19Cytochrome b6 n=3 Tax=Cannabis sativa TaxID=3483 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig89contigP-fluviatile_contig89:143..1209 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.7
Seed ortholog evalue4.1e-121
Seed eggNOG ortholog2880.D1J798
Preferred namepetB
KEGG koko:K00412,ko:K02635,ko:K02705
KEGG Pathwayko00190,ko00195,ko01100,ko02020,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map00195,map01100,map02020,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00151,M00152,M00161,M00162
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0016020,GO:0031976,GO:0031984,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035
EggNOG free text desc.electron transfer activity
EggNOG OGsCOG1290@1,KOG4663@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00194,ko03029
Hectar predicted targeting categoryother localisation
Exons1
Model size1067
Cds size648
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig89.14945.1prot_P-fluviatile_contig89.14945.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig89 261..908 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817298.743538-UTR-P-fluviatile_contig89:142..2601622817298.743538-UTR-P-fluviatile_contig89:142..260Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 143..260 +
1693571980.4098892-UTR-P-fluviatile_contig89:142..2601693571980.4098892-UTR-P-fluviatile_contig89:142..260Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 143..260 +
1622817298.7750373-UTR-P-fluviatile_contig89:908..12091622817298.7750373-UTR-P-fluviatile_contig89:908..1209Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 909..1209 +
1693571980.429099-UTR-P-fluviatile_contig89:908..12091693571980.429099-UTR-P-fluviatile_contig89:908..1209Porterinema fluviatile SAG_2381UTRP-fluviatile_contig89 909..1209 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817298.7612278-CDS-P-fluviatile_contig89:260..9081622817298.7612278-CDS-P-fluviatile_contig89:260..908Porterinema fluviatile SAG_2381CDSP-fluviatile_contig89 261..908 +
1693571980.4205737-CDS-P-fluviatile_contig89:260..9081693571980.4205737-CDS-P-fluviatile_contig89:260..908Porterinema fluviatile SAG_2381CDSP-fluviatile_contig89 261..908 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig89.14945.1

>prot_P-fluviatile_contig89.14945.1 ID=prot_P-fluviatile_contig89.14945.1|Name=mRNA_P-fluviatile_contig89.14945.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=216bp
MGKVYDWFEERLEIQSIADDITSKYVPPHVNIFYCFGGIVFTCFLVQVAT
GFAMTFYYRPSISEAFSSVEYIMTEVNFGWLIRSIHRWSASMMVLMLILH
VFRVYLTGGFKKPRELTWVTGVTLAVTTVSFGVTGYSLPWDQVGFWACKI
VTGVPEAVPVIGPPIVQLLRGGVSVGQSTLTRFYSAHTFVLPLVAAALMI
THFLMIRKQGISGPL*
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mRNA from alignment at P-fluviatile_contig89:143..1209+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig89.14945.1 ID=mRNA_P-fluviatile_contig89.14945.1|Name=mRNA_P-fluviatile_contig89.14945.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1067bp|location=Sequence derived from alignment at P-fluviatile_contig89:143..1209+ (Porterinema fluviatile SAG_2381)
AGCTCAGTTGGTAGAGCAGTGGATTGAAGATCCTCGTGTCACCAGTTCAA ATCTGGTTTCTGGCAATTAAGTCTAATTGTGTTTAATAAACTTTTAATTA AACAAGTGGGTTTTATTTATGGGTAAGGTTTATGATTGGTTTGAAGAAAG ATTAGAAATTCAATCCATTGCTGATGATATTACAAGTAAATACGTGCCGC CACATGTAAATATTTTTTATTGCTTTGGTGGAATTGTTTTTACATGTTTC TTAGTTCAAGTTGCAACAGGATTTGCAATGACGTTTTATTACCGACCTAG TATTAGTGAAGCCTTCTCATCGGTTGAATATATCATGACTGAAGTAAACT TCGGTTGGCTTATTAGATCTATCCACCGTTGGTCGGCAAGTATGATGGTT CTTATGCTAATTCTGCATGTTTTTAGAGTTTATTTAACTGGAGGTTTTAA AAAGCCACGTGAATTAACCTGGGTTACAGGAGTAACTTTAGCTGTTACGA CAGTTTCTTTCGGTGTTACTGGTTATTCTTTACCTTGGGATCAAGTAGGT TTTTGGGCTTGCAAAATTGTAACAGGCGTACCTGAGGCGGTTCCTGTTAT AGGACCTCCAATTGTACAGCTTTTACGTGGTGGAGTAAGCGTAGGTCAAA GTACTTTAACACGTTTCTATAGTGCACACACTTTTGTATTACCATTAGTT GCAGCAGCCTTAATGATTACTCATTTCTTAATGATCAGAAAACAAGGTAT TTCAGGTCCATTATAATTATTAGTAATAAGGCAAGAGTTTAGTATTAGAT ATTAAATACAAAATATTAAAATTTTAGTTTGTGATAACAAAAATATATAA TAGGAGATATTATGTCAATCTTAAAAAAACCAGATTTAACAGATCCTAAG TTACGTGCTAAATTAGCAAAAGGAATGGGTCATAATTACTACGGCGAGCC TGCTTGGCCAAATGATATTTTTTATATGTTTCCTATTTGTATTTTAGGGA CCTTTGTATTAGTAATTGGTTTAGCTGTAATGGAACCGTCAGCTTTAGGG GAGAAGGCTAATCCATT
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Coding sequence (CDS) from alignment at P-fluviatile_contig89:143..1209+

>mRNA_P-fluviatile_contig89.14945.1 ID=mRNA_P-fluviatile_contig89.14945.1|Name=mRNA_P-fluviatile_contig89.14945.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1296bp|location=Sequence derived from alignment at P-fluviatile_contig89:143..1209+ (Porterinema fluviatile SAG_2381)
ATGGGTAAGGTTTATGATTGGTTTGAAGAAAGATTAGAAATTCAATCCAT
TGCTGATGATATTACAAGTAAATACGTGCCGCCACATGTAAATATTTTTT
ATTGCTTTGGTGGAATTGTTTTTACATGTTTCTTAGTTCAAGTTGCAACA
GGATTTGCAATGACGTTTTATTACCGACCTAGTATTAGTGAAGCCTTCTC
ATCGGTTGAATATATCATGACTGAAGTAAACTTCGGTTGGCTTATTAGAT
CTATCCACCGTTGGTCGGCAAGTATGATGGTTCTTATGCTAATTCTGCAT
GTTTTTAGAGTTTATTTAACTGGAGGTTTTAAAAAGCCACGTGAATTAAC
CTGGGTTACAGGAGTAACTTTAGCTGTTACGACAGTTTCTTTCGGTGTTA
CTGGTTATTCTTTACCTTGGGATCAAGTAGGTTTTTGGGCTTGCAAAATT
GTAACAGGCGTACCTGAGGCGGTTCCTGTTATAGGACCTCCAATTGTACA
GCTTTTACGTGGTGGAGTAAGCGTAGGTCAAAGTACTTTAACACGTTTCT
ATAGTGCACACACTTTTGTATTACCATTAGTTGCAGCAGCCTTAATGATT
ACTCATTTCTTAATGATCAGAAAACAAGGTATTTCAGGTCCATTATAAAT
GGGTAAGGTTTATGATTGGTTTGAAGAAAGATTAGAAATTCAATCCATTG
CTGATGATATTACAAGTAAATACGTGCCGCCACATGTAAATATTTTTTAT
TGCTTTGGTGGAATTGTTTTTACATGTTTCTTAGTTCAAGTTGCAACAGG
ATTTGCAATGACGTTTTATTACCGACCTAGTATTAGTGAAGCCTTCTCAT
CGGTTGAATATATCATGACTGAAGTAAACTTCGGTTGGCTTATTAGATCT
ATCCACCGTTGGTCGGCAAGTATGATGGTTCTTATGCTAATTCTGCATGT
TTTTAGAGTTTATTTAACTGGAGGTTTTAAAAAGCCACGTGAATTAACCT
GGGTTACAGGAGTAACTTTAGCTGTTACGACAGTTTCTTTCGGTGTTACT
GGTTATTCTTTACCTTGGGATCAAGTAGGTTTTTGGGCTTGCAAAATTGT
AACAGGCGTACCTGAGGCGGTTCCTGTTATAGGACCTCCAATTGTACAGC
TTTTACGTGGTGGAGTAAGCGTAGGTCAAAGTACTTTAACACGTTTCTAT
AGTGCACACACTTTTGTATTACCATTAGTTGCAGCAGCCTTAATGATTAC
TCATTTCTTAATGATCAGAAAACAAGGTATTTCAGGTCCATTATAA
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