mRNA_P-fluviatile_contig88.14938.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig88.14938.1 vs. uniprot
Match: D7FPY7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPY7_ECTSI) HSP 1 Score: 333 bits (854), Expect = 4.240e-100 Identity = 279/634 (44.01%), Postives = 343/634 (54.10%), Query Frame = 1
Query: 748 MRSYRAAVAQDADYADAT-EAAAWLGFAARRNPLFLPPKAAPDASSKPLAEIGINSDNNSNDLLARLRDAQDFILLGSTVAPSGASGIPNNKAKGNPAATELPGGSRQPSGGGXXXXXXXXXXXXXXXXXVRRLTVRDKLRTLSTQLASAQQRIRELEDTLRSLEAVRDKDRGRAARAREAAAEAGRRKLTKRMYQLLGDAAMLEKGLNELDGEITAVRVRLFAERLDVARKRMLKKALTAEMSAKTKARRRRENQRIRSFPPTSSSATIRPEDENPRWTEETSAVVIQARVRGMQAR---------KPGGRRPEAGTTEEFGGDSNQRDRGDVQQE-------LAAAWTGAAARRRQVQTQSKATATPAGVEVKARGNDALASRAVVATRSQHLKENEDLAATTTESPTSVASLASGEVLSQVEDLGVVGVRAFFDSLGLGACSHRLRESS-------GGIDGSELARIARAPNPDAELLAAGVSARLHRVKLLSALGIG------NVEVLPPSLGLDQDPARSRHASVGRISG----RSGGGGPVPQPVMAIAALHMLRQLRTEQAVLARDADDGVYGIVGARRAAGTG----------TLSTSEGASLASSILPVLEEVLSAQQQLSSKVR 2517
MRS+R A+AQDAD+AD EA AWLGF RRNPLFLPPK + +++PL++IG+NS NS D LARL DAQDFILL AP G GN + E GGS G RR +RD++R ++TQLA Q IR+LE+ LRSLE R++DR RA R R AA EAG+RK+T+RMY+L GDAA+LE+G+ ELDGEIT VRVRLFA+RLDVARKRMLK ALTAEMSAK ++TSA IQARVRGM+AR + RR AG E D RGD E + +A G AR+R Q + R +D A A + +++ AAT +P + + L+QVE LG VGVRAFFD LGLG C+ RL+ G IDG+ LARIARA +PDAELLAAGV ARLHRVKLLS LGIG + EV LD+ S AS+G + R GGG PV A+AAL M+RQLR E A YG GA GTG T + SE SL S ++P LE+VLS Q +LS++++
Sbjct: 1 MRSFRTALAQDADFADGIPEAIAWLGFPTRRNPLFLPPKGSAKTANRPLSDIGLNS-ANSGDQLARLWDAQDFILLEKQPAPLG----------GNYGSVEFGGGS-----GDNAALKSGNNAVGGGSGGRRRPNIRDRIRAMNTQLAGTQGTIRDLEEKLRSLEGEREEDRERATRVRGAAREAGQRKMTQRMYRLRGDAAVLEEGIEELDGEITGVRVRLFAKRLDVARKRMLKDALTAEMSAKXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXRQDTSAATIQARVRGMRARASLESEQEARASRRRGSAGEEET---DRRLACRGDNDDEEEAAAVRIESAARGHLARKRAAQAAGTRGESRPAPPAPCRSSDDPAKNE--AEGRNEVLGHDETAATVAPAPAPLPP----DSLAQVEALGAVGVRAFFDYLGLGGCADRLQGGGXXXXXXDGAIDGAWLARIARASDPDAELLAAGVCARLHRVKLLSVLGIGPGATTASEEVAGV---LDKGELASAPASIGGVPCGERCRGSGGGXXXSPVAAMAALRMVRQLRRELLPAAESTGPTDYGH-GATDPRGTGGGETEMLENRTAARSEKESLVSELIPELEQVLSEQLRLSTQMQ 602
BLAST of mRNA_P-fluviatile_contig88.14938.1 vs. uniprot
Match: A0A6H5KXZ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXZ0_9PHAE) HSP 1 Score: 293 bits (751), Expect = 1.420e-85 Identity = 262/633 (41.39%), Postives = 331/633 (52.29%), Query Frame = 1
Query: 748 MRSYRAAVAQDADYADAT-EAAAWLGFAARRNPLFLPPKAAPDASSKPLAEIGINSDNNSNDLLARLRDAQDFILLGSTVAP--------SGASGIPNNKA--KGNPAATELPGGSRQPSGGGXXXXXXXXXXXXXXXXXVRRLTVRDKLRTLSTQLASAQQRIRELEDTLRSLEAVRDKDRGRAARAREAAAEAGRRKLTKRMYQLLGDAAMLEKGLNELDGEITAVRVRLFAERLDVARKRMLKKALTAEMSAKTKARRRRENQRIRSFPPTSSSATIRPEDENPRWTEETSAVVIQARVRGMQARKP------GGRRPEAGTTEEFGGDSNQRDRGDVQQELAAAWTGAAARRRQVQTQSKATATPAGVEVKARGNDALASRAVV-ATRSQHLKENEDLAATTTESPTSVASLA-SGEVLSQVEDLGVVGVRAFFDSLGLGACSHRLRESSGG----IDGSELARIARAPNPDAELLAAGVSARLHRVKLLSALGIGNVEVLPPS--LG-LDQDPARSRHASVGRI--------SGRSGGGGPVPQPVMAIAALHMLRQLRTEQAVLARDADDGVYGIVGARRAAGTG----------TLSTSEGASLASSILPVLEEVLSAQQQLSSKV 2514
MRS+R A+AQDAD+AD EA AWLGF RRNPLFLPPK + +++PL++IG+NS NS D LARL DAQDFILL AP G NN A GN A + G R+P+ +RD++R ++TQLA AQ I++LE+ LRSLEA R++DR RA R R AA EAG+RK+T+RMY+L GDAA+LE+G+ ELDGEIT+VRVRLFAERL + +L + P SS+AT E E R ++TSA IQARVRGM+AR +E AA +AAR + K A G + ++R A R+ +++ NE L T + + A + QVE LG VGVRAFFD LGLG C+ RLR G IDG+ LA+IARA +PDAELLAAGV ARLHRVKLLS LGIG+ G LD+ S +SVG + SG G PV A+AALHM+RQLR E + YG GA GTG T + SE SL S ++ LE+VLS Q +LS++V
Sbjct: 1 MRSFRTALAQDADFADGIPEATAWLGFPTRRNPLFLPPKDSAKTANRPLSDIGLNS-ANSGDQLARLWDAQDFILLEKQPAPLVRNDGFVEFGGGCGNNAALKSGNNAFGDGSGRRRRPN-------------------------IRDRIRAMNTQLAGAQGTIQDLEEKLRSLEAEREEDRERATRVRGAAREAGQRKMTQRMYRLRGDAAVLEEGIEELDGEITSVRVRLFAERLPSKQGGILPQQ------------------------PNSSAATGTNETERRRGQQDTSAATIQARVRGMRARASLESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEAAAVRIESAARGHLAR---KRAAEAVGTQGESRPAPPAACRSSDDPAKNEAQGRNEMLGHDETAAAVAPAXXPLPPDSFVQVEALGAVGVRAFFDYLGLGGCAERLRGGGSGGDGAIDGTRLAKIARASDPDAELLAAGVCARLHRVKLLSVLGIGHGATTASEEVAGVLDRGELASASSSVGGVPCGERCRGSGCCGXXXXXXSPVAAMAALHMVRQLRRELLPVTESTGPTDYGH-GATDPRGTGGGETENLENRTAARSERESLVSGLIRELEQVLSEQLRLSTQV 579 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig88.14938.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig88.14938.1 >prot_P-fluviatile_contig88.14938.1 ID=prot_P-fluviatile_contig88.14938.1|Name=mRNA_P-fluviatile_contig88.14938.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=849bp MYQRERCVADEMEACWKPINPRAAVLQYNSDDDPFCPLAVARKFNQLQRRback to top mRNA from alignment at P-fluviatile_contig88:112950..117214+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig88.14938.1 ID=mRNA_P-fluviatile_contig88.14938.1|Name=mRNA_P-fluviatile_contig88.14938.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4265bp|location=Sequence derived from alignment at P-fluviatile_contig88:112950..117214+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig88:112950..117214+ >mRNA_P-fluviatile_contig88.14938.1 ID=mRNA_P-fluviatile_contig88.14938.1|Name=mRNA_P-fluviatile_contig88.14938.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5094bp|location=Sequence derived from alignment at P-fluviatile_contig88:112950..117214+ (Porterinema fluviatile SAG_2381)back to top |