mRNA_P-fluviatile_contig88.14932.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig88.14932.1
Unique NamemRNA_P-fluviatile_contig88.14932.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI)

HSP 1 Score: 567 bits (1462), Expect = 7.530e-195
Identity = 321/487 (65.91%), Postives = 346/487 (71.05%), Query Frame = 1 
Query:  115 RGERLRKREEERAIKRANKRRRLGKKPLEVDRSGGHEGRVKKHANKRRLELARLERLVSKQEELLRNYRAPVQVTPLDPELKRKRRRRDFYDLDTSHWQLKGAARPADSLPGAGGTELVDERGDWEPGEDLFEKLGGVSAGDGGGSEDDSADSNXDESRERKEEAKRGEGVRSDKVSSEAKKRPSEGGFYEGPEACREYLDLNHQLAQRLHESGKDSQTHEALKRYQRSLELDPVDHVKARRGLARLLLDAGEADKARAVIDRFPDDRGCELAWSLAAIEFVAWSVLQEEGSGEEVADRALHEACRANTFVAWNIAHREIFDEVVEHADEIESPPEGSVREAFWYMVREGGLWESLEGSSDWVAGFLLRNEMLPPNPHEDIPPSGANEGVSEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNKSKEEGGDAGMFANMFETAVGMAAEMAEEQMGXXXXXXXXXXDAEGAEV 1575
            RGERLRKRE ERA KRA KRR+LGKKPL VDRSGG+E + KKHANKRRLELARLERLVSKQEELLR+YR PV V PLDPELKRKRRRRDFYDLDTSHW+L GAARPADSLPGAGGTELV+ER DWE GEDLFEKL G S+              X             EG          K   S GGFYEGPEACREYLDLNHQLAQRLH+ GK+SQT EALKRYQRSLELDPVDHV ARRGL RLLLD G+ADKARAVIDRFPDDRGCE+AWSLAAIEFVAWSVLQE+GSGEEVA +AL EAC AN FVAWNIAHRE+FDEVVEHADEIESPP GSV EAFWYMVREGGLWESLEG+S+WVA FLL+NEMLPPNPH+      A E   +D                                            N       +AGMFANMFETAVGMAAE+AE+Q+G           A+G  +
Sbjct:    3 RGERLRKREAERAEKRAKKRRKLGKKPLTVDRSGGYESQPKKHANKRRLELARLERLVSKQEELLRDYRPPVHVAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGAGGTELVNEREDWEAGEDLFEKLAGASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG------RGRQKGETSGGGFYEGPEACREYLDLNHQLAQRLHDGGKESQTEEALKRYQRSLELDPVDHVNARRGLVRLLLDGGDADKARAVIDRFPDDRGCEMAWSLAAIEFVAWSVLQEDGSGEEVAGKALREACGANPFVAWNIAHREVFDEVVEHADEIESPPAGSVMEAFWYMVREGGLWESLEGASEWVADFLLQNEMLPPNPHQGDDGVVAGEDSKDDSDGNTNGGGVREEKRVRQASADEAGDGEEEEGSTKMVLSEGDVDNDES----NAGMFANMFETAVGMAAELAEQQLGMEEGEGGEEASAQGRGI 479
[Close]
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Match: A0A835Z3Z8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z8_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.240e-64
Identity = 151/366 (41.26%), Postives = 200/366 (54.64%), Query Frame = 1 
Query:  154 IKRANKRRRLGKKPLEVDRSGGHEGRVKKHANKRRLELARLERLVSKQEELLRNYRAPVQVTPLDPELKRKRRRRDFYDLDTSHWQLKGAARPADSLPGAGGTELVDERGDW-EPGEDLFEKLGGVSAGDGGGSEDDSADSNXDESRERKEEAKRGEGVRSDKVSSEAKKRPSEGGFYEGPEACREYLDLNHQLAQRLHESGKDSQTHEALKRYQRSLELDPVDHVKARRGLARLLLDAGEADKARAVIDRFPD-DRGCELAWSLAAIEFVAWSVLQEEGSGEEVADRALHEACRANTFVAWNIAHREIFDEVVEHADEIESPPEGSVREAFWYMVREGGLWESLEGSSDWVAGFLLRNEMLPPNP 1245
            +K+A KR R  +    ++   GH+   +K   KR+LE++RL+R  +KQEELLRNY  P   TP  PE +R+RRR+DFYDLDTS WQL+GAARPA  +    G E   E   W E GEDLF                                A +GE                   F   P ACR YLDL  QL      +GK     +A++ ++R L LDP D V+ARRGL R L+D   AD+ARA+I+RF D D G  L+WSL AIE+++W +L E+GS E VA  AL  A  AN FVAW +A  + F +V+E+ D+I  P   +V EAF Y   E  LW+ LEG+++W+AG+L+      P P
Sbjct:    4 LKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII----GAE--PENPHWQEQGEDLF--------------------------------ALKGE------------------AFSSHP-ACRTYLDLKCQLGGACLAAGKSK---DAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP 309
[Close]
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Match: A0A421H0V8_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H0V8_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.480e-28
Identity = 103/327 (31.50%), Postives = 150/327 (45.87%), Query Frame = 1 
Query:  235 KKHANKRRLELARLERLVSKQEELLRNYRAPVQVTPLDPELKRKRRRRDFYDLDTSHWQLKGAARPADSLPGAGGTELVDERGDWEPGE----DLFEKLGGVSAGDGGGSEDDSADSNXDESRERKEEAKRGEGVRSDKVSSEAKKRPSEGGFYEGPEACREYLDLNHQLAQRLHESGKDSQTHEALKRYQRSLELDPVDHVKARRGLARLLLDAGEADKARAVIDRFPDDRGCELAWSLAAIEFVAWSVLQEEGSGEEVADRALHEACRANTFVAWNIAHREIFDEVVEHADEIESPPEGSVREAFWYMVREGGLWESLEGSSDWV 1203
            KK AN+RR+ + +L+R V ++ + LR +       PL P+   ++            W+LKGAARPA  L      EL DE GD  P      DL+E+                                                   + G     E  +EYL L  QLA    ++G   +    +K Y+  + LD  D   +R GLA  L+D G   +ARA+I+   DD+   LA+    IE+V+W VL+EEGS EEV   A  +A   N F+A  +A+ E F +V+E+ DEI+SP EGS+ EAF Y+ +  G+W    G+  W+
Sbjct:   34 KKAANRRRMRVVQLQRSVDRKLQALRAF----PKHPLPPKAPARK-----GPTPPDQWKLKGAARPAALLARIAAGEL-DECGDEFPKPIETFDLYEQT-------------------------------------------------LKAGKMVEREETKEYLSLLKQLAAACCDAGMPDR---GIKNYELCMSLDTKDSFHSREGLACALIDEGRGAEARALIEEHKDDKSVVLAYCRVIIEYVSWEVLEEEGSSEEVVQAAFSKAFALNPFIAVVLAYHETFFQVMEYVDEIKSPKEGSIEEAFVYVSQNIGVWVDTVGAYQWI 298
[Close]
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Match: D0NCW9_PHYIT (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=D0NCW9_PHYIT)

HSP 1 Score: 127 bits (319), Expect = 3.070e-28
Identity = 111/361 (30.75%), Postives = 160/361 (44.32%), Query Frame = 1 
Query:  235 KKHANKRRLELARLERLVSKQEELLRNYRAPVQVTPLDPELKRKRRRRDFYDLDTSHWQLKGAARPADSLPGAGGTELVDERGDWEPGE----DLFEKLGGVSAGDGGGSEDDSADSNXDESRERKEEAKRGEGVRSDKVSSEAKKRPSEGGFYEGPEA----CREYLDLNHQLAQRLHESGKDSQTHEALKRYQRSLELDPVDHVKARRGLARLLLDAGEADKARAVIDRFPDDRGCELAWSLAAIEFVAWSVLQEEGSGEEVADRALHEACRANTFVAWNIAHREIFDEVVEHADEIESPPEGSVREAFWYMVREGGLWESLEGSSDWVAGFLLRNEMLPPNPHEDIPPSGANEGVSED 1293
            KKH N+RR+ + +L+R V ++ + LR +  P    P  P  K  +          S W+LKGAARPA  L      EL DE G+  P      DL+E +                                                     F EG  A     +EY+ L  QLA    E+G   +    +K Y+  + LD  D+  +R GLA  L+D G   +ARA+I+   D+    LA+    IE+V+W VL+EEGS EEV  +A  +A   N F+A  IA+ E F +V+E+ +EI  P  GS+ EAF Y+ +  G+W    G+  W+   L  NE+  P        +   E VSE+
Sbjct:   36 KKHQNRRRMRVVQLQRSVDRKLQELRAF--PKNPAPPKPARKGPK--------PPSEWKLKGAARPAALLAKIAAGEL-DECGNEFPKPVETFDLYEMM-----------------------------------------------------FKEGKMAEHNDTKEYISLLKQLAAACCEAGMPDR---GIKNYELCMSLDKADYFHSREGLACALVDEGRGAEARALIEEHKDEDSAVLAYCQVVIEYVSWEVLEEEGSSEEVVQKAFRKAFALNPFLAVVIAYHEAFFQVMEYVEEITDPKRGSIEEAFVYISQNIGVWVDTVGAHQWIEKEL--NELSEP--------AATKEDVSEE 319
[Close]
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Match: A0A2P4Y4B9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4B9_9STRA)

HSP 1 Score: 101 bits (251), Expect = 6.600e-21
Identity = 57/139 (41.01%), Postives = 83/139 (59.71%), Query Frame = 1 
Query:  832 ARRGLARLLLDAGEADKARAVIDRFPDDRGCELAWSLAAIEFVAWSVLQEEGSGEEVADRALHEACRA---NTFVAWNIAHREIFDEVVEHADEIESPPEGSVREAFWYMVREGGLWESLEGSSDWVAGFLLRNEMLPP 1239
            +R GLA  L+D G   +ARA+I+   D+    LA+    IE+V+W VL+EEGS EEV  +A  +A  A   N F+A  IA+ E F +V+E+ DEI++P  GS+ EAF Y+ +  G+W    G+  W+   L  NE+  P
Sbjct:    1 SREGLACALVDEGRGAEARALIEEHKDEESAVLAFCQVIIEYVSWEVLEEEGSSEEVVQKAFRKAFVAFVLNPFMAVVIAYHETFFQVMEYVDEIKNPKRGSIEEAFVYVSQNIGVWVDTVGAYQWIEKEL--NELAEP 137
[Close]
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Match: A0A7S4MTR9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTR9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.650e-20
Identity = 67/187 (35.83%), Postives = 100/187 (53.48%), Query Frame = 1 
Query:  685 EGPEA--CREYLDLNHQLAQRLHESGKDSQTHEALKRYQRSLELDPVDH-----VKARRGLARLLLDAGEADKARAVIDRFPDDRGCELAWSLAAIEFVAWSVLQEEGSGEEVADRALHEACRANTFVAWNIAHREIFDEVVEHADEIESPPEGSVREAFWYMVREG-GLWESLEGSSDWVAGFLLR 1221
            EGP    CR++L L  QL     E+ K     EA   +   ++L+  D        AR  L R+ ++A   + AR + +R P D    + +S A IEFV+WSV++E+GS  E A+  L +A  AN F A+ IA  + F++VVE+ DEIE    G++ EA  Y   E  G W   EG+++W+   +LR
Sbjct:  197 EGPPQPYCRQFLSLLMQLGHLSVEAKKLKSAREA---FLECIDLEGTDPNSVVVTMARARLMRMCVEANRPESARRLWERIPHDSTAWVRYSAALIEFVSWSVIEEDGSSRERAEEMLRKAIEANKFCAYYIAFNDTFEKVVEYGDEIEDAEAGTLEEAIEYCHSEQMGFWLGTEGAAEWIREVILR 380
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig88.14932.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FPV9_ECTSI7.530e-19565.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z3Z8_9STRA1.240e-6441.26Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A421H0V8_9STRA2.480e-2831.50Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
D0NCW9_PHYIT3.070e-2830.75Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A2P4Y4B9_9STRA6.600e-2141.01Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A7S4MTR9_9STRA5.650e-2035.83Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig88contigP-fluviatile_contig88:63433..70670 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score577.8
Seed ortholog evalue5.5e-162
Seed eggNOG ortholog2880.D7FPV9
EggNOG OGs2C0FH@1,2QU7Q@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_008510.1
Exons9
Model size2034
Cds size1659
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817297.1651127-UTR-P-fluviatile_contig88:63432..637621622817297.1651127-UTR-P-fluviatile_contig88:63432..63762Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 63433..63762 -
1693571975.3809068-UTR-P-fluviatile_contig88:63432..637621693571975.3809068-UTR-P-fluviatile_contig88:63432..63762Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 63433..63762 -
1622817297.286154-UTR-P-fluviatile_contig88:70625..706701622817297.286154-UTR-P-fluviatile_contig88:70625..70670Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 70626..70670 -
1693571975.4955285-UTR-P-fluviatile_contig88:70625..706701693571975.4955285-UTR-P-fluviatile_contig88:70625..70670Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 70626..70670 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817297.18058-CDS-P-fluviatile_contig88:63762..642461622817297.18058-CDS-P-fluviatile_contig88:63762..64246Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 63763..64246 -
1693571975.3903632-CDS-P-fluviatile_contig88:63762..642461693571975.3903632-CDS-P-fluviatile_contig88:63762..64246Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 63763..64246 -
1622817297.1942017-CDS-P-fluviatile_contig88:64904..650411622817297.1942017-CDS-P-fluviatile_contig88:64904..65041Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 64905..65041 -
1693571975.3992007-CDS-P-fluviatile_contig88:64904..650411693571975.3992007-CDS-P-fluviatile_contig88:64904..65041Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 64905..65041 -
1622817297.2044127-CDS-P-fluviatile_contig88:65410..655911622817297.2044127-CDS-P-fluviatile_contig88:65410..65591Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 65411..65591 -
1693571975.4091306-CDS-P-fluviatile_contig88:65410..655911693571975.4091306-CDS-P-fluviatile_contig88:65410..65591Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 65411..65591 -
1622817297.2170944-CDS-P-fluviatile_contig88:66130..662351622817297.2170944-CDS-P-fluviatile_contig88:66130..66235Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 66131..66235 -
1693571975.4239159-CDS-P-fluviatile_contig88:66130..662351693571975.4239159-CDS-P-fluviatile_contig88:66130..66235Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 66131..66235 -
1622817297.2279623-CDS-P-fluviatile_contig88:66547..666291622817297.2279623-CDS-P-fluviatile_contig88:66547..66629Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 66548..66629 -
1693571975.435235-CDS-P-fluviatile_contig88:66547..666291693571975.435235-CDS-P-fluviatile_contig88:66547..66629Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 66548..66629 -
1622817297.2402036-CDS-P-fluviatile_contig88:67073..674221622817297.2402036-CDS-P-fluviatile_contig88:67073..67422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 67074..67422 -
1693571975.452836-CDS-P-fluviatile_contig88:67073..674221693571975.452836-CDS-P-fluviatile_contig88:67073..67422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 67074..67422 -
1622817297.2511797-CDS-P-fluviatile_contig88:67847..679491622817297.2511797-CDS-P-fluviatile_contig88:67847..67949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 67848..67949 -
1693571975.466047-CDS-P-fluviatile_contig88:67847..679491693571975.466047-CDS-P-fluviatile_contig88:67847..67949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 67848..67949 -
1622817297.2638988-CDS-P-fluviatile_contig88:69245..693931622817297.2638988-CDS-P-fluviatile_contig88:69245..69393Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 69246..69393 -
1693571975.475806-CDS-P-fluviatile_contig88:69245..693931693571975.475806-CDS-P-fluviatile_contig88:69245..69393Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 69246..69393 -
1622817297.2742934-CDS-P-fluviatile_contig88:70554..706251622817297.2742934-CDS-P-fluviatile_contig88:70554..70625Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 70555..70625 -
1693571975.4852848-CDS-P-fluviatile_contig88:70554..706251693571975.4852848-CDS-P-fluviatile_contig88:70554..70625Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 70555..70625 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig88.14932.1prot_P-fluviatile_contig88.14932.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig88 63763..70625 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig88.14932.1

>prot_P-fluviatile_contig88.14932.1 ID=prot_P-fluviatile_contig88.14932.1|Name=mRNA_P-fluviatile_contig88.14932.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=553bp
MGRNKKKGHGGGPGISKKMSEGSRGERLRKREEERAIKRANKRRRLGKKP
LEVDRSGGHEGRVKKHANKRRLELARLERLVSKQEELLRNYRAPVQVTPL
DPELKRKRRRRDFYDLDTSHWQLKGAARPADSLPGAGGTELVDERGDWEP
GEDLFEKLGGVSAGDGGGSEDDSADSNSDESRERKEEAKRGEGVRSDKVS
SEAKKRPSEGGFYEGPEACREYLDLNHQLAQRLHESGKDSQTHEALKRYQ
RSLELDPVDHVKARRGLARLLLDAGEADKARAVIDRFPDDRGCELAWSLA
AIEFVAWSVLQEEGSGEEVADRALHEACRANTFVAWNIAHREIFDEVVEH
ADEIESPPEGSVREAFWYMVREGGLWESLEGSSDWVAGFLLRNEMLPPNP
HEDIPPSGANEGVSEDDEEEKGDDRKADGNSGGGGGRRKRGRRVDEDNSD
DNQDEVSAARNKSKEEGGDAGMFANMFETAVGMAAEMAEEQMGGGDEEGG
GDDDAEGAEVEGEGGEEIHGADIKGAPWSTGSGRKGDREEYEEGSSSDEG
KV*
back to top

mRNA from alignment at P-fluviatile_contig88:63433..70670-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig88.14932.1 ID=mRNA_P-fluviatile_contig88.14932.1|Name=mRNA_P-fluviatile_contig88.14932.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7238bp|location=Sequence derived from alignment at P-fluviatile_contig88:63433..70670- (Porterinema fluviatile SAG_2381)
CGTTGTGTCTGTGTTTCTTCGCTCCACAAACACCAGCGCGCAATCATGGG
CCGCAACAAGAAGAAAGGGCATGGTGGAGGTCCGGGAATCTCGAAGAAAA
TGTCCGAAGGAAGTAGGCAAGTCGAATTCGGCCCCTTTTTGTTCTCTAAG
GTTGATTTTGCCTTGCACACCACATAAAAGGAAGATAGGAATAGCAGGCG
GCAAATACTAAAGGCACCTAGCACCTTTGTCATACCGCTTTTAGCCAATG
CCGCTTTCAACCTGAACCGCAGGCTAGACTCTCGTTATGCCATCCCTGTG
CCCTTGTGAAAGAACACAACATGTTGGAGGATGGTTCGCCTGTTGACTCG
AACCGCACCCGAAGAGTCATCGGGTCTCGCCACCACCAACCCACTCCCCA
GCGATCACACACCTCTTTCAGCGACCGAGACGCTTGCGCTCATCAGGCAT
GTATAGAGAGAACGAAAGCAAGCCATTTTCGACGTCTTTTCTCCTGGACA
GAGGCCGACGTGTTCGTCCGAGAGAAAGCTATTTCAAATACTATTATCGC
CCACTCGTAGGCGACGGTGCGGATCCATCCCATTCGGCCGGGTCGGGGAT
TTTGAACCCCAGACGGGATTTCAAATCCCGGATATTGGTTGGGTGTGGTC
TGCACAGGTTCAGCTCTGTTCTCGAGAAAAAGGCGTAATCTTGGTTGGAC
GAAATCTGAACGGCAAGCTGTGCATATGTCCCCAAACGCGAGGGAGAGAC
GGAGCCTTCGCCGAGACCCCAGAAGCGGTTTTTGTAGGGCCCGAGGATCG
ACTGCAACAATTCAGGAGGGTGCCGATCCTTTCAGTTTTGCAGGTCTGAA
TGGGACGGAAACACAACTCAAGCGTCCTTGGACAAACTGCATAAGACGGC
CACTTGACCGCCGAAAGTTTTCGGGCCGACGATCGTGCAAAAGGCCGCTT
GTCGCCCTCGTTTACAGCAGATTCTTGACTGGGGTGTGAGGAAAGCTGGG
CACAAAGTGCGGGTAGCTGCCGTCCGATAGACGCACTGCCGTGTTTGAGC
TCATCAACGACAGCTTGACGGCCGCATATCAGTTACCCCCCAATGAATGC
AGATCGGCTATGGGTCCTCGCTTCCATCGCGCTGCTGCTGCTGGCGGTCA
AGGGTCCAGAAACATTTTCACGAAAACAAATCGCCGAAGACAGACGAGAT
GGTTCATTGTGGAGAGCCTCATCCTGTGAGACGGAACTCGTATTCCGCCG
TTTGTGCTGTGTGTATCTTTTCGACAGGGGAGAGCGGCTGCGGAAGAGGG
AGGAAGAGCGGGCCATAAAGCGCGCCAACAAGCGGCGCAGGCTTGGCAAG
AAGCCTCTGGAGGTGGACAGGTCCGGTGGGCACGAGGGTCGAGTCAAGAA
GCACGCCAACAAGCGACGCCTCGAGGTAATCACCACCGCACAGGACGACA
GACACAGGAAACGCCGAATGCAGAAAGGGCGCATTCTACGTATACAGAAA
CATGAGAGGAGGAAGCAATAACCTTGCCAAGTACGCAAGGCACGGAAGTG
GCGGGCACAGGTTGCCCGACAAAGCGAGGGGTGTTGATCCACCGTAACAG
CCGTTGGTACTAACTTGCATAGACCGATTGATCAACGTGGCTGGGATAAT
TTGACAAAAGGAAACGCAAGGCCGGCACATTGTTCAGGCCCGCCGGGACT
TTGCGACATTATTTTCCGAACAGTCATCTGTTGTTTTAAACGGCCATCCG
TTGTTTATTGCGTGGGCGTTCAGCCCCCTTTTTCAACGATTATCGTGTTG
TTGTCCCATACGGTAGTTCCATTCTGTTCCGAAAGAGCGAACTGACTAAT
TTGGCGTATTGTGAACCAGCAGATACCACAGCTCGCTGCCTGTTCGCTGA
CAGCTAACCGCGACCAGGCTTTCACCGTGCAGAACCTGACTTATCGTCAT
GATCTCAAATTTGCAATCCATGCTAAAACATCGGTATTGCAAAGTCAAGC
GGCGGTGGGTGAGCAGGATCCTCGTTGAGATCCTCCAGATTTGCATGCAT
ATTGACGAAAAGCAAACCATTCTCTGTCCTTCCCTTTTCACCCCTCCACG
TGGTTGCCTTGTCTTGTAATGGCATGCGCTGGTCTTGCAGTGGTGTCGAC
AGGTGGATGCCATGAAACTACGTTCGTTGCCTCCCCGTGTTGTGGCCAGC
CCCCCGCCCGCATGCCCGGTTTTTTGGCCGGAAATGGTCGTTACCCCCCG
CTGATGCCGTTTGTGCGTGTCCTGCCCCTTGCCCCCTGCCCCTTTACCTT
TCTCGAGTTGCGTCACGTGGAGTATTGTTCGAATATCTCTCCAAGGGAAA
CTGGAATTGAAGCAGAAGATGACTTCGACCGATCCGGCGCACAAAGCCGT
CACACCATCTGCTCCAAACCCAGTGCCGACGTTTTTGTTGTGTCTTCCGA
TCGCCGTTCTTTGGAAATCGTCGAGGTTATTTGTATTTCGTAAAAAAACT
CCGCGAGGTGACCACGAGGAAGGCAGGGCTGAACGCGCCGCTTCCCTGGT
TCCAGACATAAGCCTGACAGTCGCACTTGTAGAGAAAACCCCTCTCTGCG
ACCAGGGGTCGGGCGGTGGGTGCCGCGCCACATCGCCCCCACGTGAACAA
GAAAGCAGAGACGAAGCAATTTCCTTCATGGCCTGTACACCGCTTTTCTT
CTTGATCCCGCTGCCTTCTAGTTGGCCAGGCTGGAGAGGCTTGTCTCGAA
GCAGGAGGAGCTGCTGCGCAACTACCGGGCTCCGGTGCAAGTAACCCCGC
TGGACCCAGAGCTCAAGCGCAAGGTACGCAGAGGGGAGCACGGGGCCGGT
CCCGGCGGAGGTGTAGGGTTAAGCACAATGGAGTTTAAGGGACGGGGGGG
GTACTGGCCTTCGCTTGCCTAGACGCTGACCAAGCACATATTTCCCTCTC
AGAGACAATACTTCTAATTTGTTTGAGTACTTTGATGTGGCACCCCCGGC
AGTGGAGTGTGGCGCGGATGTTCGGGGAGAACGGGATTATACTTCCCCCA
AGCCTTTTGTTTGAGTGTGCATGTATGGAGAAGAGAAGCGACCATCGGAG
GCAATGTTGATTGCGACCGTTCGAGGAGATCGGCAACCATGACACAGGTT
ATACGTAGCCTCCAACCCGAGCACTAAGCCGAGATCGCTTCCCCTCTCTT
TTGCCGCATTTCATACCTCAACATCTCCCCCCCCCCTCTTTCCTGCAGAG
GCGTCGGCGAGACTTTTACGACCTCGACACGTCTCACTGGCAGCTGAAGG
GGGCAGCGAGGCCCGCCGACTCCCTGCCGGGCGCGGGGGGCACGGAGCTC
GTAGACGAGAGGGGGGACTGGGAGCCCGGGGAAGACCTATTCGAGAAATT
GGGTGGGGTCAGCGCCGGGGACGGTGGCGGTAGCGAAGATGACAGCGCTG
ACAGCAACAGCGACGAAAGCCGCGAGAGGAAGGAGGAGGCGAAAAGGGGG
GAGGGGGTAAGGAGCGACAAGGTCAGCAGCGAGGCGAAGAAACGCCCGAG
CGAAGGAGGTTTCTACGAAGGGCCCGAGGCGTGCCGGGAGTATCTCGGTG
AGATCGAGAGAGCGTGCTCATCGGGGGCAGAGCGGTTTGATTCGCACAGA
GGGTACTTTGTTCAGTAGGCGTGATGCGAGCATCGCATGTTGATTCTCAG
GTCGGAACGGAGCACGCGGCTTGGCTGCAAGATGCTAGTTACCTTGGGTA
TGCAGTCGAAAGTCGCTACATTATTAAATGGTGGTAGTGACATCACGGTG
GCTGTGTGCCGAACGGTTTATGCGTATTTTTCGGCTGTAGTTCAGGTGTA
CTCTAGTGCCAACGGGGAAAAATACATGGCTCATCCATTCAGCGCTAGCA
CCTGATGTTGGCCGCGCCAATCATCTTGAGAGCAAGTGTCTCTAATACCT
AAACCGAGCAAGCCGCAGATCAACCGGTCCACCTCCCATGGATTTGCTCG
TTTTTTTTTGTCGATCGATCTAAAACACAAAACTTTGCCAGATCTGAACC
ACCAGCTGGCTCAAAGGCTACACGAAAGCGGCAAGGATTCTCAGACGCAC
GAGGCGCTCAAGCGGTACCAACGGTAAGTTCAGCTCTTGTCCCGCTTGTG
TTCAAGAGGCCCTCAAGCGGTGTCCACGGTGAATTCAGCTCGTAGGCCCC
ACATGTGTTCAGCCAGAAGGATACACGGGGCCACTTCGTGTTCATTGTTG
TAGTTGGCTGAGAGCTAAAGACGTGCTGCGCAGTCTGGCTGGCGAAGCTG
CAGTCCTCCCCCCTCCCTCTGCCTCCATCTTGTATTTTTTCCTCGTTCGA
GCTGCTTCCACTCCGTATCTCCGGATTTTGCAAGGTGGTTGATTGTTTGC
GTCTCCTATCGCCCTTCGGCTTCCCTTACTGGTAGATCCCTGGAGCTTGA
CCCAGTCGATCACGTCAAGGCCAGGAGGGGGTTGGCGCGGCTACTTCTGG
ATGCGGGCGAGGCGGACAAGGCTCGTGCCGTCATCGACCGGTGAGATATT
ATGTCTCTCTCGTTCTCTTGTGTAGACATTTCGCTTTTTTCGCGGCGTGT
TTACATGCGAGAGGTACGGACGGACGGAGGGAGGGAGAGAGAGAGAGAGG
GAGAGAGAGAGAAAGAGAGAAAGAGAGAGAGATAGTGAGGATCCTTGTGC
GTTTTGCTGGTTTCGTGTCACTTCATCTCGCGCTTTTGTATTTTCCCGCC
CCTCGTGTCTTCACTTCTTACCATAAAATACTTGACCTACTGCTCCCCTG
ACCGGTGCTCGATCCCGCCCAGTGTTGCTGCGATAAGCGCACGCGCTCGG
ACGGGTTTCAAATGACGCAGAAAAGTTCGACGTCGAATAGATGTGGTTGG
TCAAAGCGTGGGTCAGGTTCCGTGCTTCACGTGCGTAGTGTGTATTTTTC
ACATCCACGCTCTGGAACACTTTTCTCCACAACCACTTGAATAAAAGAAA
CGAGTAAACGAAAAAGAAATCGACTCAAGCCCTCAGGGAAAGGCAGGCAA
AAAATCAAGCAACAGCAACGCAAATACAGGTTTCCGGACGACCGAGGGTG
CGAGCTGGCCTGGTCGCTGGCAGCAATCGAGTTCGTGGCGTGGTCCGTGC
TGCAAGAGGAAGGCTCCGGGGAGGAAGTGGCCGACAGAGCTCTGCACGAG
GCCTGCCGGGCAAACACGTTCGTGGCCTGGAACATCGCCCACAGAGAGAT
TTTCGACGAGGTGAATTGGGGACCGCGGTCAGGGATCGTGATGACGATGT
GAATGAGATTCGGGAACGACTATGGCACCGTCCCTGGGAGCCAGCAAGGG
GAAAGGCCGGGCATTTCTAGCCCTTTTCCGTCCTGCATGGCCGTAGATGG
GTGTTCCCGCAGGCCCTCGCGTCTCTACCTGCCCGGGCTTTAACGAAGCA
CATCGGAGTCAGCTAGGGTAGAGAGTGAGGGGAGGGGAGGGAGCGGGCGA
TGAGATCGTGATGTATCTTTCGTTCTCGGGGTCAGACGAGATGATCTATC
AGCGCTGGAGTATAACAACAAGAAAATCGCCCCCACGGCCTCGCTCTGCC
GTAACCCCTCGAACGAAACGCGACCTTAGGTTGTGGAACACGCCGACGAG
ATTGAGTCGCCTCCAGAAGGATCAGTCAGGGAAGCCTTCTGGTACATGGT
GCGGGAGGGGGGGCTCTGGGAAAGCCTGGAAGGGTCTTCGGACTGGGTGG
CAGGTTTCTTACTGCGGTGAGTCGACCGACGCCTTCTTGAGCGGCAATTT
GGTGTTGCTTCACCTTCGCCGCCGTACTTTTGTTTGCCCTGAGGCGGTTG
CAACAGCCCTTTGCTTCTGTCAGTTGCCTGCGTGCCTGCTTGTCCCTTGG
CGCTGTCGGTTGGTAGTGCGATTCGTCGCTGGTTGATAGACGGAAGTGTT
GTATGATCGTCGTTAGGTATCTGTCGGTCTCCGTATTGTCGAAAAAGGTC
GACCTGGGAATCACTCAGCATGTGGGTGCGTCGGCTGCCGTTGGCGACAC
TTGTCCGCTTGCGCGATGCGAAGGCGCATGTCTTGGTGGCGGTATCCGTG
AATGGGTGCTACGAAGAATAGAATTTGGTGCCTGTTGTCTTCCGGTGTTT
ACACCTCGCCATCACACATTTCACGTTCTTTTATGTGCGGACGGCATCGT
CTTAAAGCCTGCTTCAGCGATCTGGAACTGTCTCGTTATGAGGTTCAGAC
CTGATCATCTTAGTCGTGCAAGGTCCAGGTGAGTTGGTGTTCCTGTAGCC
TTGATTAGAACGCATTAGCACAAACACCCGTGCCGTATTTTTGCCTCATA
GTTGCCCGCTTTTTTTTTTGTTTGTTTGTTATCCCGTGTGCGCGCGTGCA
TGATCTGTGTTCTACTATTAATAGGAACGAAATGCTGCCTCCAAATCCCC
ACGAGGATATCCCGCCATCTGGCGCGAACGAGGGGGTCAGCGAGGACGAC
GAGGAGGAGAAAGGCGACGACCGAAAGGCTGACGGCAACAGCGGCGGCGG
CGGAGGGAGACGCAAGCGAGGCCGCCGTGTTGACGAGGACAACAGCGATG
ACAATCAGGATGAAGTCTCGGCCGCGAGAAACAAGTCGAAAGAAGAAGGC
GGCGACGCGGGCATGTTCGCCAACATGTTCGAGACGGCTGTGGGCATGGC
GGCAGAGATGGCCGAGGAGCAGATGGGGGGCGGGGACGAAGAAGGCGGCG
GCGACGACGACGCCGAGGGGGCGGAAGTGGAGGGCGAGGGTGGTGAGGAA
ATACACGGCGCCGACATCAAGGGGGCGCCGTGGTCCACGGGGAGCGGGCG
CAAAGGCGACAGGGAAGAATATGAGGAGGGGAGCAGCAGCGATGAAGGAA
AAGTGTGATTGGATTGGGTGATGGTATCGGTGCTTTCGGTATGGCGGGAA
ATGCGTAAGCGGAAATTATGGGGGATTGAGGGTCACAATACCGGCGAGAT
GCCGGAAGGGGTGGAGGGGCCGGAGAGAGACGGTGCGGGCAGTAGCGGTC
GAGCCGACGGGGTGCTTCAACAGATATATTTTGTGCCATCGGCCGAAGTC
CCCACTTACATGGATCACTTACGGCCCCGCCCTGTGTGGCAACTGTAGCG
TCTGTCTACTCGACCTGACCACGCAGCAGATTTCGCGGCAGTGGGAACAC
AACGGGCTGATCGTAACGGCCTCTTGTCACACCAGGAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig88:63433..70670-

>mRNA_P-fluviatile_contig88.14932.1 ID=mRNA_P-fluviatile_contig88.14932.1|Name=mRNA_P-fluviatile_contig88.14932.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3318bp|location=Sequence derived from alignment at P-fluviatile_contig88:63433..70670- (Porterinema fluviatile SAG_2381)
ATGGGCCGCAACAAGAAGAAAGGGCATGGTGGAGGTCCGGGAATCTCGAA
GAAAATGTCCGAAGGAAGTAGATGGGCCGCAACAAGAAGAAAGGGCATGG
TGGAGGTCCGGGAATCTCGAAGAAAATGTCCGAAGGAAGTAGGGGAGAGC
GGCTGCGGAAGAGGGAGGAAGAGCGGGCCATAAAGCGCGCCAACAAGCGG
CGCAGGCTTGGCAAGAAGCCTCTGGAGGTGGACAGGTCCGGTGGGCACGA
GGGTCGAGTCAAGAAGCACGCCAACAAGCGACGCCTCGAGGGGAGAGCGG
CTGCGGAAGAGGGAGGAAGAGCGGGCCATAAAGCGCGCCAACAAGCGGCG
CAGGCTTGGCAAGAAGCCTCTGGAGGTGGACAGGTCCGGTGGGCACGAGG
GTCGAGTCAAGAAGCACGCCAACAAGCGACGCCTCGAGTTGGCCAGGCTG
GAGAGGCTTGTCTCGAAGCAGGAGGAGCTGCTGCGCAACTACCGGGCTCC
GGTGCAAGTAACCCCGCTGGACCCAGAGCTCAAGCGCAAGTTGGCCAGGC
TGGAGAGGCTTGTCTCGAAGCAGGAGGAGCTGCTGCGCAACTACCGGGCT
CCGGTGCAAGTAACCCCGCTGGACCCAGAGCTCAAGCGCAAGAGGCGTCG
GCGAGACTTTTACGACCTCGACACGTCTCACTGGCAGCTGAAGGGGGCAG
CGAGGCCCGCCGACTCCCTGCCGGGCGCGGGGGGCACGGAGCTCGTAGAC
GAGAGGGGGGACTGGGAGCCCGGGGAAGACCTATTCGAGAAATTGGGTGG
GGTCAGCGCCGGGGACGGTGGCGGTAGCGAAGATGACAGCGCTGACAGCA
ACAGCGACGAAAGCCGCGAGAGGAAGGAGGAGGCGAAAAGGGGGGAGGGG
GTAAGGAGCGACAAGGTCAGCAGCGAGGCGAAGAAACGCCCGAGCGAAGG
AGGTTTCTACGAAGGGCCCGAGGCGTGCCGGGAGTATCTCGAGGCGTCGG
CGAGACTTTTACGACCTCGACACGTCTCACTGGCAGCTGAAGGGGGCAGC
GAGGCCCGCCGACTCCCTGCCGGGCGCGGGGGGCACGGAGCTCGTAGACG
AGAGGGGGGACTGGGAGCCCGGGGAAGACCTATTCGAGAAATTGGGTGGG
GTCAGCGCCGGGGACGGTGGCGGTAGCGAAGATGACAGCGCTGACAGCAA
CAGCGACGAAAGCCGCGAGAGGAAGGAGGAGGCGAAAAGGGGGGAGGGGG
TAAGGAGCGACAAGGTCAGCAGCGAGGCGAAGAAACGCCCGAGCGAAGGA
GGTTTCTACGAAGGGCCCGAGGCGTGCCGGGAGTATCTCGATCTGAACCA
CCAGCTGGCTCAAAGGCTACACGAAAGCGGCAAGGATTCTCAGACGCACG
AGGCGCTCAAGCGGTACCAACGATCTGAACCACCAGCTGGCTCAAAGGCT
ACACGAAAGCGGCAAGGATTCTCAGACGCACGAGGCGCTCAAGCGGTACC
AACGATCCCTGGAGCTTGACCCAGTCGATCACGTCAAGGCCAGGAGGGGG
TTGGCGCGGCTACTTCTGGATGCGGGCGAGGCGGACAAGGCTCGTGCCGT
CATCGACCGATCCCTGGAGCTTGACCCAGTCGATCACGTCAAGGCCAGGA
GGGGGTTGGCGCGGCTACTTCTGGATGCGGGCGAGGCGGACAAGGCTCGT
GCCGTCATCGACCGGTTTCCGGACGACCGAGGGTGCGAGCTGGCCTGGTC
GCTGGCAGCAATCGAGTTCGTGGCGTGGTCCGTGCTGCAAGAGGAAGGCT
CCGGGGAGGAAGTGGCCGACAGAGCTCTGCACGAGGCCTGCCGGGCAAAC
ACGTTCGTGGCCTGGAACATCGCCCACAGAGAGATTTTCGACGAGGTTTC
CGGACGACCGAGGGTGCGAGCTGGCCTGGTCGCTGGCAGCAATCGAGTTC
GTGGCGTGGTCCGTGCTGCAAGAGGAAGGCTCCGGGGAGGAAGTGGCCGA
CAGAGCTCTGCACGAGGCCTGCCGGGCAAACACGTTCGTGGCCTGGAACA
TCGCCCACAGAGAGATTTTCGACGAGGTTGTGGAACACGCCGACGAGATT
GAGTCGCCTCCAGAAGGATCAGTCAGGGAAGCCTTCTGGTACATGGTGCG
GGAGGGGGGGCTCTGGGAAAGCCTGGAAGGGTCTTCGGACTGGGTGGCAG
GTTTCTTACTGCGGTTGTGGAACACGCCGACGAGATTGAGTCGCCTCCAG
AAGGATCAGTCAGGGAAGCCTTCTGGTACATGGTGCGGGAGGGGGGGCTC
TGGGAAAGCCTGGAAGGGTCTTCGGACTGGGTGGCAGGTTTCTTACTGCG
GAACGAAATGCTGCCTCCAAATCCCCACGAGGATATCCCGCCATCTGGCG
CGAACGAGGGGGTCAGCGAGGACGACGAGGAGGAGAAAGGCGACGACCGA
AAGGCTGACGGCAACAGCGGCGGCGGCGGAGGGAGACGCAAGCGAGGCCG
CCGTGTTGACGAGGACAACAGCGATGACAATCAGGATGAAGTCTCGGCCG
CGAGAAACAAGTCGAAAGAAGAAGGCGGCGACGCGGGCATGTTCGCCAAC
ATGTTCGAGACGGCTGTGGGCATGGCGGCAGAGATGGCCGAGGAGCAGAT
GGGGGGCGGGGACGAAGAAGGCGGCGGCGACGACGACGCCGAGGGGGCGG
AAGTGGAGGGCGAGGGTGGTGAGGAAATACACGGCGCCGACATCAAGGGG
GCGCCGTGGTCCACGGGGAGCGGGCGCAAAGGCGACAGGGAAGAATATGA
GGAGGGGAGCAGCAGCGATGAAGGAAAAGTGTGAGAACGAAATGCTGCCT
CCAAATCCCCACGAGGATATCCCGCCATCTGGCGCGAACGAGGGGGTCAG
CGAGGACGACGAGGAGGAGAAAGGCGACGACCGAAAGGCTGACGGCAACA
GCGGCGGCGGCGGAGGGAGACGCAAGCGAGGCCGCCGTGTTGACGAGGAC
AACAGCGATGACAATCAGGATGAAGTCTCGGCCGCGAGAAACAAGTCGAA
AGAAGAAGGCGGCGACGCGGGCATGTTCGCCAACATGTTCGAGACGGCTG
TGGGCATGGCGGCAGAGATGGCCGAGGAGCAGATGGGGGGCGGGGACGAA
GAAGGCGGCGGCGACGACGACGCCGAGGGGGCGGAAGTGGAGGGCGAGGG
TGGTGAGGAAATACACGGCGCCGACATCAAGGGGGCGCCGTGGTCCACGG
GGAGCGGGCGCAAAGGCGACAGGGAAGAATATGAGGAGGGGAGCAGCAGC
GATGAAGGAAAAGTGTGA
back to top