mRNA_P-fluviatile_contig88.14931.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig88.14931.1
Unique NamemRNA_P-fluviatile_contig88.14931.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: D7FPV8_ECTSI (tRNA (Guanine-N(7)-)-methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPV8_ECTSI)

HSP 1 Score: 292 bits (747), Expect = 8.130e-93
Identity = 139/162 (85.80%), Postives = 149/162 (91.98%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKR 1084
            LGLEIRRPTAA+AL+R A LGTRNCHVVCCNANVDLDA+LT AAQHGA IDTVCI FPDPHFK +HYKRRVLQPELVTCIEKHL PGGT FMQSD+ +VVEDMRVI R TA++LEDTRPDMEDWMEGPDKNPFGVQTEREK TYEKES EENRV+RCVFVK+
Sbjct:   72 LGLEIRRPTAALALERAAGLGTRNCHVVCCNANVDLDAVLTEAAQHGASIDTVCIQFPDPHFKTRHYKRRVLQPELVTCIEKHLEPGGTLFMQSDVLEVVEDMRVIARETARVLEDTRPDMEDWMEGPDKNPFGVQTEREKVTYEKESAEENRVYRCVFVKK 233
[Close]
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: A0A6H5L8C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8C0_9PHAE)

HSP 1 Score: 293 bits (749), Expect = 3.640e-91
Identity = 140/162 (86.42%), Postives = 149/162 (91.98%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKR 1084
            LGLEIRRPTAA+AL+R A LGTRNCHVVCCNANVDLDA+LT AAQHGA IDTVCI FPDPHFK KHYKRRVLQPELVTCIEKHL PGGT FMQSD+ +VVEDMRVI R TA++LEDTRPDMEDWMEGPDKNPFGVQTEREK TYEKES EENRV+RCVFVK+
Sbjct:  209 LGLEIRRPTAALALERAARLGTRNCHVVCCNANVDLDAVLTEAAQHGASIDTVCIQFPDPHFKTKHYKRRVLQPELVTCIEKHLEPGGTLFMQSDVLEVVEDMRVIARETARVLEDTRPDMEDWMEGPDKNPFGVQTEREKVTYEKESAEENRVYRCVFVKK 370
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BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: A0A835ZDY0_9STRA (Guanine-N(7)--methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY0_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.300e-33
Identity = 72/162 (44.44%), Postives = 99/162 (61.11%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKR 1084
            LGL+IR P  AVAL +       NCH + CNANV+L+ +L      G  ++ V + FPDPHFK ++ K+RVL+PELV  I++ L PGGT FMQ DI +V  +MR+ITR+    L+D   +++ W+     NP G+ TERE A   K       V+RC+F KR
Sbjct:  108 LGLDIRWPVVAVALCKATERTLDNCHFISCNANVNLERILGDVIAAGGVVERVSVQFPDPHFKTRNKKKRVLKPELVETIQQFLSPGGTLFMQGDIHEVQREMRLITRKVGTGLQDLEANVDSWLSH---NPMGIPTERELAVQAKGGD----VYRCMFKKR 262
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BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: R1BVT0_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BVT0_EMIHU)

HSP 1 Score: 127 bits (318), Expect = 2.520e-29
Identity = 81/182 (44.51%), Postives = 105/182 (57.69%), Query Frame = 2 
Query:  578 EAAG-AKLLGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMR-VITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKRGDGAS*GQARR 1117
            E++G A +LGLEIR   A  A +    LG  N   + CNANV+L+A+L  A++ G P+ +V I FPDP FKA+H KRRV+QPELV  I +HL PGG  F Q+D+ D+ +D R  I +  A  L D R D  DW     K    V TERE++  E + P    V+R VF K   G   G  RR
Sbjct:  110 ESSGSANVLGLEIRSALAEAAAEDARRLGVANAAFLPCNANVNLEAVLLRASRCG-PLQSVSIQFPDPWFKARHKKRRVVQPELVETIARHLEPGGWLFFQTDVLDLAQDARDTIRQAAAGTLRDAREDAGDWAAPKPKPLACVSTERERSCAELQRP----VYRAVFEKLPAGMPAGHERR 286
[Close]
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: A0A0M0JEV5_9EUKA (tRNA (Guanine-n-)-methyltransferase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JEV5_9EUKA)

HSP 1 Score: 114 bits (284), Expect = 3.100e-25
Identity = 69/170 (40.59%), Postives = 92/170 (54.12%), Query Frame = 2 
Query:  581 AAGAKLLGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKM-LEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKRG 1087
            +A A +LGLEIR   A  A +     G  N   + CNAN +LD +L +A     P+ +V I FPDP FK+KH+KRRV+QP+LV  I +HL PGG  F QSD+ D+ E  R + R      L D R    DW+         V TERE+A+     P    ++R  F+K G
Sbjct:   63 SAEANVLGLEIRAALADAATEDAQRFGLHNAAFLACNANTNLDEILRLATPC-TPLRSVSIQFPDPWFKSKHHKRRVVQPDLVRAIARHLPPGGWLFFQSDVLDLSEGARHVIRSVEGTGLRDVRESETDWLAPKPDALLHVSTERERASEALGRP----IYRACFLKEG 227
[Close]
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: A0A3M1STK3_9CYAN (tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A3M1STK3_9CYAN)

HSP 1 Score: 108 bits (271), Expect = 1.470e-23
Identity = 72/162 (44.44%), Postives = 88/162 (54.32%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKR 1084
            LGLEIR P    A +    +G  N H + CNAN DLDA+L  A+     +  V I FPDP FK +H KRRV+QPELV  I  HL PGG   +QSD+ DV   M     R  +  E  RP       G  +NPF + TERE AT+ K  P    V+R  FV+R
Sbjct:   62 LGLEIREPLVEEANRWRDEVGLTNLHYLFCNANRDLDAIL--ASLPSGVLRRVAIQFPDPWFKKRHQKRRVVQPELVDAIVAHLVPGGEVVLQSDVEDVARQM---CDRFGERPEFDRPHPH----GLPENPFPIATEREIATFNKGKP----VYRAAFVRR 210
[Close]
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: U9VHU9_9CYAN (tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Leptolyngbya sp. Heron Island J TaxID=1385935 RepID=U9VHU9_9CYAN)

HSP 1 Score: 107 bits (266), Expect = 7.270e-23
Identity = 71/182 (39.01%), Postives = 90/182 (49.45%), Query Frame = 2 
Query:  548 EGYFREGYGHEAAGAKLLGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRP--DMEDWMEGP--DKNPFGVQTEREKATYEKESPEENRVFRCVFVK 1081
            +GYF             LGLEIR P     LKR   LG  N H++ CNAN  L ALL   A    P   V I FPDP FK +H KRRV+QP+LV  +  H+RPG   ++QSD+  V EDM  +    A       P         GP    NP   QT+RE+ T ++  P    V+R +F+K
Sbjct:   43 KGYFISDMAQICPDWNFLGLEIREPLVEQCLKRRDQLGLNNLHMLFCNANNSLQALL---ASLPNPPQRVSIQFPDPWFKKRHQKRRVVQPQLVADLADHMRPGAWIWLQSDVETVAEDMVEVFAANASFQRSFAPLNPAPSGATGPWLADNPLPAQTDRERVTLDQGKP----VYRALFIK 217
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BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: UPI0019526A39 (tRNA (guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=Spirulina major TaxID=270636 RepID=UPI0019526A39)

HSP 1 Score: 106 bits (264), Expect = 1.240e-22
Identity = 68/164 (41.46%), Postives = 87/164 (53.05%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKRGD 1090
            LGLEIR P    A  +   L   N H + CN N+ L  LL         +D V I FPDP FK +H KRRV+QPELV  + + L  G T F+QSD+  +  +MR   +   +  +  R   E W+E   KNPF V TEREKAT+ K  P    V+RC F K  +
Sbjct:   62 LGLEIREPLVTEANHQRDELKLSNLHYLFCNVNISLSILLESLPDR--VLDCVTIQFPDPWFKKRHVKRRVVQPELVEELARSLPIGATVFLQSDVAAIASEMREQFQHYPQFSQQYR---EQWLE---KNPFPVTTEREKATFVKGEP----VYRCSFFKENE 213
[Close]
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: UPI001A8C6F10 (tRNA (guanosine(46)-N7)-methyltransferase TrmB n=1 Tax=Phormidium pseudopriestleyi TaxID=1759527 RepID=UPI001A8C6F10)

HSP 1 Score: 104 bits (260), Expect = 4.560e-22
Identity = 67/164 (40.85%), Postives = 91/164 (55.49%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRNCHVVCCNANVDLDALLTVAAQHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVFVKRGD 1090
            LG+EIR P    AL +       N H + CN N     L  + +     +  V I FPDP FK +H KRRV+QPELV  + K+L PGG  F+QSD+ DV  +MR    R A+     R   EDW+    +NP  V TERE++T +K+ P    V+R VF+K+G+
Sbjct:   62 LGIEIREPLVETALAQRDEEKLSNLHFIFCNINHTFAPL--IESLPPGILHRVSIQFPDPWFKKRHQKRRVVQPELVENVAKYLVPGGMVFLQSDVHDVAIEMR---DRFAEHSSFERQGGEDWLP---ENPMPVATEREQSTLDKDEP----VYRVVFLKKGE 213
[Close]
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Match: A0A7S2EKE1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EKE1_9STRA)

HSP 1 Score: 107 bits (266), Expect = 8.310e-22
Identity = 69/163 (42.33%), Postives = 94/163 (57.67%), Query Frame = 2 
Query:  599 LGLEIRRPTAAVALKRVAALGTRN-CHVVCCNANVDLDALLTVAA---QHGAPIDTVCIHFPDPHFKAKHYKRRVLQPELVTCIEKHLRPGGTFFMQSDIFDVVEDMRVITRRTAKMLEDTRPDMEDWMEGPDKNPFGVQTEREKATYEKESPEENRVFRCVF 1075
            LGLEIR    A A +RV           V CNANVDLD +L++     ++ AP++ V I +PDPHFK +H KRRV+ PELV+ + K+L  G   F+QSDI  V++ MR   R  +   ED    +E++M   D NP GV TERE +  +K+ P    VFR + 
Sbjct:  166 LGLEIRPNVVAYAQERVPKWNLAGKLSFVGCNANVDLDRILSLYCSEEKNNAPLEYVSIQYPDPHFKNRHEKRRVVTPELVSTVAKYLPEGKVVFLQSDIQSVLDTMRERFREQSIYFEDEIESVEEYM---DVNPLGVPTERELSVLKKDLP----VFRTIL 321
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig88.14931.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPV8_ECTSI8.130e-9385.80tRNA (Guanine-N(7)-)-methyltransferase n=1 Tax=Ect... [more]
A0A6H5L8C0_9PHAE3.640e-9186.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZDY0_9STRA3.300e-3344.44Guanine-N(7)--methyltransferase n=1 Tax=Tribonema ... [more]
R1BVT0_EMIHU2.520e-2944.51Uncharacterized protein n=2 Tax=Emiliania huxleyi ... [more]
A0A0M0JEV5_9EUKA3.100e-2540.59tRNA (Guanine-n-)-methyltransferase n=1 Tax=Chryso... [more]
A0A3M1STK3_9CYAN1.470e-2344.44tRNA (guanine-N(7)-)-methyltransferase n=2 Tax=Cya... [more]
U9VHU9_9CYAN7.270e-2339.01tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Lep... [more]
UPI0019526A391.240e-2241.46tRNA (guanosine(46)-N7)-methyltransferase TrmB n=1... [more]
UPI001A8C6F104.560e-2240.85tRNA (guanosine(46)-N7)-methyltransferase TrmB n=1... [more]
A0A7S2EKE1_9STRA8.310e-2242.33Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig88contigP-fluviatile_contig88:57051..63032 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score123.6
Seed ortholog evalue1.1e-25
Seed eggNOG ortholog2880.D7FPV8
KEGG rclassRC00002,RC00043
KEGG koko:K00927,ko:K03439
KEGG ReactionR01512
KEGG Pathwayko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230
KEGG ModuleM00001,M00002,M00003,M00165,M00166,M00308,M00552
GOsGO:0003674,GO:0003824,GO:0004672,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005975,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009409,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009579,GO:0009628,GO:0009941,GO:0009987,GO:0010035,GO:0010038,GO:0010319,GO:0015977,GO:0015979,GO:0016020,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019253,GO:0019538,GO:0019685,GO:0030312,GO:0031967,GO:0031975,GO:0036211,GO:0042221,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0048046,GO:0050896,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901576
EggNOG free text desc.tRNA (guanine-N7-)-methyltransferase activity
EggNOG OGsCOG0220@1,KOG3115@2759
Ec32 ortholog descriptiontRNA (guanine-N(7)-)-methyltransferase
Ec32 orthologEc-01_008520.1
EC2.1.1.33,2.7.2.3
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko04147
Hectar predicted targeting categorysignal peptide
Exons8
Model size1601
Cds size630
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig88.14931.1prot_P-fluviatile_contig88.14931.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig88 57062..59052 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817297.0261497-UTR-P-fluviatile_contig88:57050..570611622817297.0261497-UTR-P-fluviatile_contig88:57050..57061Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 57051..57061 +
1693571975.2775793-UTR-P-fluviatile_contig88:57050..570611693571975.2775793-UTR-P-fluviatile_contig88:57050..57061Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 57051..57061 +
1622817297.0773604-UTR-P-fluviatile_contig88:59052..591081622817297.0773604-UTR-P-fluviatile_contig88:59052..59108Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 59053..59108 +
1693571975.3207252-UTR-P-fluviatile_contig88:59052..591081693571975.3207252-UTR-P-fluviatile_contig88:59052..59108Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 59053..59108 +
1622817297.0897727-UTR-P-fluviatile_contig88:59635..597101622817297.0897727-UTR-P-fluviatile_contig88:59635..59710Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 59636..59710 +
1693571975.3288321-UTR-P-fluviatile_contig88:59635..597101693571975.3288321-UTR-P-fluviatile_contig88:59635..59710Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 59636..59710 +
1622817297.1013584-UTR-P-fluviatile_contig88:60086..601311622817297.1013584-UTR-P-fluviatile_contig88:60086..60131Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 60087..60131 +
1693571975.3395517-UTR-P-fluviatile_contig88:60086..601311693571975.3395517-UTR-P-fluviatile_contig88:60086..60131Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 60087..60131 +
1622817297.1122057-UTR-P-fluviatile_contig88:60503..606181622817297.1122057-UTR-P-fluviatile_contig88:60503..60618Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 60504..60618 +
1693571975.3478086-UTR-P-fluviatile_contig88:60503..606181693571975.3478086-UTR-P-fluviatile_contig88:60503..60618Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 60504..60618 +
1622817297.1226995-UTR-P-fluviatile_contig88:61667..617351622817297.1226995-UTR-P-fluviatile_contig88:61667..61735Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 61668..61735 +
1693571975.3636537-UTR-P-fluviatile_contig88:61667..617351693571975.3636537-UTR-P-fluviatile_contig88:61667..61735Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 61668..61735 +
1622817297.1351078-UTR-P-fluviatile_contig88:62431..630321622817297.1351078-UTR-P-fluviatile_contig88:62431..63032Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 62432..63032 +
1693571975.3723252-UTR-P-fluviatile_contig88:62431..630321693571975.3723252-UTR-P-fluviatile_contig88:62431..63032Porterinema fluviatile SAG_2381UTRP-fluviatile_contig88 62432..63032 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817297.0379875-CDS-P-fluviatile_contig88:57061..574681622817297.0379875-CDS-P-fluviatile_contig88:57061..57468Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 57062..57468 +
1693571975.2899053-CDS-P-fluviatile_contig88:57061..574681693571975.2899053-CDS-P-fluviatile_contig88:57061..57468Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 57062..57468 +
1622817297.053958-CDS-P-fluviatile_contig88:57802..579241622817297.053958-CDS-P-fluviatile_contig88:57802..57924Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 57803..57924 +
1693571975.3002002-CDS-P-fluviatile_contig88:57802..579241693571975.3002002-CDS-P-fluviatile_contig88:57802..57924Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 57803..57924 +
1622817297.0656936-CDS-P-fluviatile_contig88:58951..590521622817297.0656936-CDS-P-fluviatile_contig88:58951..59052Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 58952..59052 +
1693571975.3119516-CDS-P-fluviatile_contig88:58951..590521693571975.3119516-CDS-P-fluviatile_contig88:58951..59052Porterinema fluviatile SAG_2381CDSP-fluviatile_contig88 58952..59052 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig88.14931.1

>prot_P-fluviatile_contig88.14931.1 ID=prot_P-fluviatile_contig88.14931.1|Name=mRNA_P-fluviatile_contig88.14931.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=210bp
MLSRHATMGVLLLRATATLAWSSSFARVNRLAAGRSDSLRQCPRTPGSSR
SPAGRHRFCNSTSGGIRTLAGATASPGTDVGVEDGKERRSRYRETTGDEQ
ASEAEAAGASRVIGDVEIQPLLQRHMEALGSADGRIRKTRQHVNPLAATF
RVPVALPERWFQSAFRNPSAPLLVDIGCAKGTFVKVMATKQPERNYLGLR
SGGPPRRWP*
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mRNA from alignment at P-fluviatile_contig88:57051..63032+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig88.14931.1 ID=mRNA_P-fluviatile_contig88.14931.1|Name=mRNA_P-fluviatile_contig88.14931.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5982bp|location=Sequence derived from alignment at P-fluviatile_contig88:57051..63032+ (Porterinema fluviatile SAG_2381)
CAGTTTGAGACATGCTCTCCCGTCACGCCACAATGGGGGTTCTACTCTTG
CGAGCAACAGCAACGCTCGCTTGGTCATCATCTTTCGCACGGGTGAATCG
GTTGGCGGCCGGAAGGTCTGATAGCTTGCGTCAGTGCCCCAGGACGCCCG
GCTCCTCCCGCTCGCCAGCAGGGAGACACCGCTTCTGTAACAGCACCAGC
GGTGGAATCCGGACCCTGGCAGGCGCAACAGCTTCACCAGGGACAGATGT
TGGTGTTGAAGACGGAAAGGAGAGACGATCAAGATATAGGGAGACAACAG
GTGACGAGCAAGCGTCAGAAGCAGAGGCCGCGGGTGCCTCTCGTGTCATC
GGAGATGTTGAAATCCAGCCGCTATTGCAGCGCCACATGGAGGCTCTGGG
GTCCGCTGACGGGAGAATGTAAGTGCGGAGAAAACTGTGTTTGCGATATG
CGTTCAGTTCGTCGGTGTACGACCCGACTCTCTTGCGGCACAGGTGTGTC
GTCGGCCCTGCCGCCTGCTGCCGGCTAGGGAAGCAGAGAGCGGCACAATC
GCATGTTTTAACTGCACCGCGTTCGTGCGCTTCCACACATTCAACTGAAC
GCGCGCATCCACGAGGCACAACCAATCATCTGAGACCAGGTAGCCTGAGA
TGCATCTTCGAAAAAGTGTGCTGTTGTTCGCTTTTGCTTACGATCCCCCT
CGGTTCTTCTGCCTCTCTGCTCTCGCTGCCCTACCTTGCTGCTATCCGAC
AGAAGGAAGACGAGGCAACATGTCAACCCTCTGGCGGCCACGTTTCGAGT
GCCCGTTGCCTTGCCGGAGCGATGGTTCCAGTCAGCCTTCCGGAATCCTT
CGGCGCCTTTGCTGGTTGATATAGGTAAAGGCTGTGTGCTTTCCTCGCGG
AGTGCCTTTCAACATCGTCCTGCGGGGTGGGTTTCGGAACCGCTTGGTGT
TCGGACGTTTTGTTCGAGGGCATGGAGGGAGGTTGTATGAGGGGATGTGG
TGTGATGAACACGATATCTTCAATGGACATCCAACGGCATGATCGCATTG
AATGTCTTCGTGGTAGATCATATCCTCAGGAGCCGCCGACGGAAAAAATT
GTCAGGGAGAACAGGTCCAGGGCTAAACTGTCGAACTAGTCTCTTGAGGT
CCCTTGATTTACGAGTGTGTTTCTCCGCGTTCTGACATTCTATGATTTTC
TCTTGGTCTCCAGACGCGCGACTAGCACAAGTGCATGCTCAACTCCGCAC
GCACGTACCGCGAGCTCGCTGCACAGATCGCGGCCCTTATTTCAAGCGGG
GCGAAGAGAGAGAGCTTCAGTCAAAAATGGGGAACAGGACGAAAAAGCCC
TCTACCGATCGAAAGCAACACCGATCACGCAACCACGGCGATGACACCCG
TGAGGACAGGGGCACAAAGGAGGCGGGCGGCCGATACGTGGATCATGTCG
TGTCGCACGGATGTCATAAAGTTCCATGACCCTCCGTCACGCTCAATAAA
TATCGGCATAAGTACTGAAACAATAACACGATTTCGTCGCGCCCGTAGAC
AGCAATCAGCTACGGGCGGGGTTGTATTTCTTTGTTTCAGACCTACTCGC
AATGGCGCACGATATTGTGCCGATTGCTCACCGACCCATACAGCATGGAA
TAAAGTGCTTTTAGTTTGTTCGACAACACTCTACGAAACGCAAGTGGACG
ACAAAGGTTCCGTGCGCACTTTAGTCGATTGTGAGAGCGACGACACCTCA
GAATCGCTGAAGGGGAATGCTTGGGGTTGAGGTGAAAAATGATCAAGAAC
GCGCAACAGAGCCACCAAAAAGAAGGGGCGGAATTAAGATACGTCTTGTT
TCAACATAGAAAAATAAGCAGCTTTCCCGCTGCCCCCCCCCCCCTGCACA
GGATGCGCGAAGGGTACTTTCGTGAAGGTTATGGCCACGAAGCAGCCGGA
GCGAAACTACTTGGGCTTGAGATCCGGCGGCCCACCGCGGCGGTGGCCTT
AAAGAGAGTGGCGGCGCTGGGCACGCGCAATTGCCATGTTGTTTGCTGCA
ACGCTAACGTGAGAGGGTCGCAGCAAACGTTTTGTCGTGACACAGAGGGT
AGGTAGAAGGTGGAAGCCTGCTTTCTTCCCCTGTCTTGGCTATTGGATGA
GCGGCGTGCTTAGGTTCCAGCGCCATGCTTGCGGTTGGTTCAGCCACCAC
AGGCTTGAGGCTTTTGACAGGCCACGACGGTGGGTACGGCAGAGGAAAGG
GAGCGTGGCGATATATACATACAGCAGCTGAGAATACGAACGAGAGTCTG
CGGCTGGCTGACGTAGGAGAAAGGGCTTGGCGCCGGATGTTCTTCGCGAG
TCAGTTGCCTCCCCGGATATCCTTCTCTTTTCGCAATCGTAATCTTTTGT
GGGTCACCCTCCCCGTGCACAAGCAAACATTAGTTCTTTGGTGCAGATAC
CCCCAAATAGCTGACTCCCTAGTTTTCGTTGGGCCTGTTGGCGGAGAGGA
GGTGGTGCTTTCATGGGGTGCAAATAGTGAAGAAACGTGACGTGCTCAAA
ACTTGCCCCCCTTGTTTTGCGTGGGCACGAGGCAGGTCGATTTGGACGCA
TTGCTCACGGTAGCAGCGCAGCACGGAGCTCCGATCGACACAGTTTGCAT
ACACTTCCCGGTGAGTTGTTGCTCTCCTCTGGCACTCTCCTGAGGTGGTG
TGCTTGCTTGCTTCCTGCGCGTGCAAAAATTCGTCGCTCGAACAAATATT
CGCAGGGACATTCGTCGTTTGTCGATGTTGTGTTCATTTCATCACTTTCA
TCAACGACCGCGAAAGTCGATGTAGGTGGAACTTGTTTTGTGGCGTGGGG
ATTCCTTGCAGCTCGCACCCACACGTTCCAGTAGTGTGTACATCTTGATG
CGGTGCCCCCGTAGCCAGCATCAAGACGTGTTGCGGACACCGAGCCTCCC
CATTGTTCGTAATCCCGCCGCCTCTTTGCTTGCCCCGCGATCACGGCCTT
GCCATGTGTTCTGTCTTCCGCCGGTTCTCTGTTCAGGATCCGCACTTCAA
GGCCAAGCACTACAAGCGGCGAGTATTGCAGGTCAGCTATGTTTGACTTG
CCCTTACTCTGTGGTCGAGGGGCTGTCGTTGTCGCTAGTCTTGCTCGTGC
TGCGTCTTTCATCTCCTCTCACCACTGTTGCTGTTCGCGCTGTTGCCGTG
GTCGGGATATTTTTCCGTCCAACTTCCCTGCCTTCTTTCGGCGTCTCGTG
TTTCTGTGTCTTCACCATCGACACGACTTCTCTGTCTGAAACGCTGTTCG
CCAGGCTGCGGGGTCCCTGTAATATCCCCGGGCGGGCTCGAGAACTGTAA
CTTTCCGTTTCGGCGCGTTTTTCACACGCTTGACTTTGCCCGTCCCCGGC
CTCTGTGCCTACTGTCCTTTTCTGGCTCTACTTCACTGAAAATAAACACC
TAGCCTGAGCTTGTGACGTGCATCGAGAAGCATCTCCGACCTGGGGGCAC
CTTTTTCATGCAGTCGGACATTTTCGACGTGGTGGAGGACATGCGGGTCA
TCACCCGACGGACTGCCAGTGAGTAGTGGTCAGGTGCTGCTCATGCCATC
GAGTTACTGCTGTTGACGATGTTTTTCCTACTGCTTTGTTTTCGCCGCTG
CCGTTGCTGATTTTGCTGTCGCGTATGGAAACAAAAAAACAATTAAAAAA
AAATCCTCGATTGGCAGTACACTCGCCGCAGGCAACCGCCAGCGGGTGTT
TATTGTCGATGAGCGAAAAAAAAAAAGTGGGTGGAACGCAACCCGGTGCA
CTCTCAGACGACTTAGGTGGCCCCGATCGCATAAGGCAACGACTCGTCCC
CTCAAAATAACTTTTAGGTCCGGACCGCGCCATTGCAGTTTACCGTCAGA
TCTGCCTGTGTCATTGCAAGTTTGATCTGATCTTCCCACAACATTGAAAT
AATTGCATCTGTTGATAGCGCGCCCGAGTTCAACCTAGCAGTCCGCACCG
TGCATGTACCCGAGCAGCAAAGAAAAAGTATGTGCCCCCGTACATCCGTG
CACTTGTGGCAGCTGACGTGCAAGGACACGGCCTTGCTCGAGACGCGCAG
TTTCCGCAACTCCGTGTGGCGTTGCGAATTTCCAGATTTCACCGCACCTT
CTGTGCGCGCCTTGTGTCCCTGTACCAGAGCGACAACTACCCTCAGTTGT
TTGTTGAGGACCCTAGCTAGACAAGCCAAGATGGTGGTAGTGTTGGCCCA
CTTCCGGGGACAGGCTCACTTGCCTCTGTGGATACTTCGAGAGCATATAT
AGAGAGAAGAGGTCCCGAAAGGGAGAGAGCGCGAGAGAGGGGAAGCGAAC
CCTGTGGGAGAGCCTTCCTCCCCTGAAGTGTGTGTGGAATAATTGAATAT
CAAGCGGGGTTGCTTTTGACACGATGGTCAGCAGATACCCCGAGGAAGAT
CATATGTTCCCATCTGAGTGTGTGTGCCTAGTGTTGGTCACTTCCAAACC
TGACATCCACATCGTGCGGCACCTTTCTTCGCTCCCGCCCCTTCATGGGC
ACGTCCCGGTCTTGAACGACTCCCACGGTATACCGTCGCGAAACCCGCTG
CTTCGGGTTGCTTGCAGAGATGCTCGAGGACACGCGGCCAGACATGGAGG
ATTGGATGGAAGGCCCAGATAAGAACCCTTTTGGAGTGAGTGTAAAAGTA
TCCACCAATCTGGTTGACTGGCTTTTCTGGGTGGATTGTCGACCACGGCA
TACCGCTCAACGGAGTGCATTCCCCGCCGGGTCTTGTAAAACCCACATTT
ATAGCAACCCTTGCGGGGATCAACACCGCTGGGGTGATTTCTGTGAGAAT
GACATAGATTCTACTTCGGGATACCAAATACCGCAACGAACCACCAGGTG
GCAGAACCCCGTCGGAAGAGGAGAGATGCAGGGCGAGGAGAGAAAGAGAG
CAAAAACAACGCACAACGACGCACGAACACACACGCACACATTTTTTTGT
TCGTTTGGTGCGCAAACGCATGCATAGAACCTTCCGGAGGGAGTATTTCC
CCGTTACTTTCTCAAGTGTGTCGGCGAGCAGCGGCCGGAATCTCGGCCCT
CAGCAAGCGAGGACTAAAGCTCTGGTTTTGTCTTCTGGTTTTGTGCCGTA
GACGCGACGGCACAGCGGTCTAGAGAGCGTCGGAGGTGATGTCGACACTC
TGTGGCAGGATTCTGCCGCGACGTGGCACTCGTCTCTCTCTCATCCACCG
AGGGCGTTGTCTCCATGTGTCTGTCAACCGGTGCACGATCGTGTGTGGGC
ATTCCCGACCGGCCACACAACAAAGCCAAGCGAAAACCACCCACTGGTGA
CAATCGAGAGCGACCGAATGTACGTGCGCAGGTGCAGACGGAGCGTGAAA
AGGCGACCTACGAGAAGGAATCGCCGGAGGAAAACAGAGTCTTCCGATGC
GTGTTCGTGAAGAGAGGTGACGGCGCATCATAAGGACAGGCGCGGCGGTT
TGAAGGAGGGTCGGATGGGCTCCGCTTTGCCCCCTCCGCTCCTTGTGTCT
ACCTGAAATCCCGCGGGAATCGTCATTTCCAACGCTGCAGCAGTAAAGTA
GCCCATGTCTCTCCCCCGGGAAACAGGCTGACTCGTAAGGGGAAAGGGGG
TTCGACTTGCATGTCGGTTATTTGTTGGCAGCTCACGCGGCGCGTGCACA
GCGTTGCCGATCTCCGTCGGGGCCGATGTTGTGGGAAGATCACCCAACGA
CTGCGTTAAGTTAAGAATTGAGGTCGTCGGCAACAAAAAGGGGCCAACTC
GTTGCCGTGGTGCTCGTCGCACATGAGTCTGCCGGAAATGGTGGCCAGTT
TTCCATCAGCCGCGCGTGTCTCGAATCTTCGCAGCTTTTCGCGCAGGTGT
GGATTCGCGTCGTGTGTGCGCGTGGCTTTTGTTTTGTAGGCGAGGCGGTC
AAACATCGGGGCTCGTACGTGGAAAACATCTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig88:57051..63032+

>mRNA_P-fluviatile_contig88.14931.1 ID=mRNA_P-fluviatile_contig88.14931.1|Name=mRNA_P-fluviatile_contig88.14931.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1260bp|location=Sequence derived from alignment at P-fluviatile_contig88:57051..63032+ (Porterinema fluviatile SAG_2381)
ATGCTCTCCCGTCACGCCACAATGGGGGTTCTACTCTTGCGAGCAACAGC
AACGCTCGCTTGGTCATCATCTTTCGCACGGGTGAATCGGTTGGCGGCCG
GAAGGTCTGATAGCTTGCGTCAGTGCCCCAGGACGCCCGGCTCCTCCCGC
TCGCCAGCAGGGAGACACCGCTTCTGTAACAGCACCAGCGGTGGAATCCG
GACCCTGGCAGGCGCAACAGCTTCACCAGGGACAGATGTTGGTGTTGAAG
ACGGAAAGGAGAGACGATCAAGATATAGGGAGACAACAGGTGACGAGCAA
GCGTCAGAAGCAGAGGCCGCGGGTGCCTCTCGTGTCATCGGAGATGTTGA
AATCCAGCCGCTATTGCAGCGCCACATGGAGGCTCTGGGGTCCGCTGACG
GGAGAATATGCTCTCCCGTCACGCCACAATGGGGGTTCTACTCTTGCGAG
CAACAGCAACGCTCGCTTGGTCATCATCTTTCGCACGGGTGAATCGGTTG
GCGGCCGGAAGGTCTGATAGCTTGCGTCAGTGCCCCAGGACGCCCGGCTC
CTCCCGCTCGCCAGCAGGGAGACACCGCTTCTGTAACAGCACCAGCGGTG
GAATCCGGACCCTGGCAGGCGCAACAGCTTCACCAGGGACAGATGTTGGT
GTTGAAGACGGAAAGGAGAGACGATCAAGATATAGGGAGACAACAGGTGA
CGAGCAAGCGTCAGAAGCAGAGGCCGCGGGTGCCTCTCGTGTCATCGGAG
ATGTTGAAATCCAGCCGCTATTGCAGCGCCACATGGAGGCTCTGGGGTCC
GCTGACGGGAGAATAAGGAAGACGAGGCAACATGTCAACCCTCTGGCGGC
CACGTTTCGAGTGCCCGTTGCCTTGCCGGAGCGATGGTTCCAGTCAGCCT
TCCGGAATCCTTCGGCGCCTTTGCTGGTTGATATAGAAGGAAGACGAGGC
AACATGTCAACCCTCTGGCGGCCACGTTTCGAGTGCCCGTTGCCTTGCCG
GAGCGATGGTTCCAGTCAGCCTTCCGGAATCCTTCGGCGCCTTTGCTGGT
TGATATAGGATGCGCGAAGGGTACTTTCGTGAAGGTTATGGCCACGAAGC
AGCCGGAGCGAAACTACTTGGGCTTGAGATCCGGCGGCCCACCGCGGCGG
TGGCCTTAAGATGCGCGAAGGGTACTTTCGTGAAGGTTATGGCCACGAAG
CAGCCGGAGCGAAACTACTTGGGCTTGAGATCCGGCGGCCCACCGCGGCG
GTGGCCTTAA
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