mRNA_P-fluviatile_contig87.14923.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE) HSP 1 Score: 98.6 bits (244), Expect = 4.410e-18 Identity = 68/142 (47.89%), Postives = 86/142 (60.56%), Query Frame = -2
Query: 1843 ETTSRSSLLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSISS-PDNDTPLDSSTPEFESQDEEDETRSHISDSS------------DVTRGSNDDGSGNKDGTKRPVHTALTAAGITLRP 2229
++++ +LLYK+ AR+LREYHGVPS+TAD+LEKTM LL LRP RLVVQGLAPEKLL+G ++ + D SS E E + +D + +SD D R N G +K PVH AL AAGITLRP
Sbjct: 18 DSSNNGTLLYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLLKGFSAADAHADTTDSSGSSGSEVEPEQADD---NQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRP 156
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 82.0 bits (201), Expect = 2.470e-13 Identity = 59/148 (39.86%), Postives = 78/148 (52.70%), Query Frame = -2
Query: 1843 LLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSIS------------------------SPDNDTPLDSSTPEFESQDEEDETRSHIS--DSSDVTRGSNDDGSGNKDGTKRPVHTALTAAGITLRP 2208
LLYK+AAR+L EYHGVPS+TA LEKTM LL+LRP RLV QGLAP++LL G ++ + +N DS+T S+D D H++ DS D+ G+ +K P+H AAG+ LRP
Sbjct: 50 LLYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADNNQVSDDSNT---NSRDGTDIEHDHVATQDSIDIETGA----------SKHPIHAVFVAAGVQLRP 184
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5KBH6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBH6_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 3.110e-13 Identity = 39/59 (66.10%), Postives = 46/59 (77.97%), Query Frame = -2
Query: 2032 LLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSISSPD 2208
LLYK+AAR+LREYHGVPSIT LEKTM LL+LRP RLV QGLAP++ L G ++ D
Sbjct: 56 LLYKAAARNLREYHGVPSITVGGLEKTMVLLQLRPGRLVAQGLAPKQFLEGKSAADDAD 114
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 81.3 bits (199), Expect = 1.710e-12 Identity = 53/135 (39.26%), Postives = 75/135 (55.56%), Query Frame = -2
Query: 1843 LLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSISSPDNDTPLDSSTPEFESQDEEDETRSHISDSSDVTRGSNDDGSGNKDG-------------TKRPVHTALTAAGITLRP 2208
L++K+AAR+LREYHGVPSIT LE TM LLELRP RLV QGLAP+ LL+G ++ +D+ + + E +E +++ S D++ S+D G D +K P+ A G+ LRP
Sbjct: 40 LMFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLKGNSTAG-------VDADSTDGSGGFEAEEEQANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRP 167
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: D8LC36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC36_ECTSI) HSP 1 Score: 75.5 bits (184), Expect = 4.250e-12 Identity = 59/129 (45.74%), Postives = 75/129 (58.14%), Query Frame = -2
Query: 1828 LLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSISSPDNDTPLDS-STPEFESQDEEDETRSHISDSSDVTRGSNDDGSGNKDG-TKRPVHTALTAAGITLRPAKQCR 2208
L+Y++AAR+LRE+ VPS+TA LEKTMALL+LRP RLV QGLAP LL+G S PD D S S E E D + S+ SD+ +V + D G + G +K P+H AA P K R
Sbjct: 45 LVYQAAARNLREFRRVPSLTAGGLEKTMALLQLRPARLVAQGLAPRDLLKGH---SVPDADADSSSGSEVEPEQADSQIFDDSNSSDTENVNIATQD---GIEAGASKHPIHAVFVAAASISGPVKPGR 167
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5KI70_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI70_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 5.910e-12 Identity = 36/56 (64.29%), Postives = 45/56 (80.36%), Query Frame = -2
Query: 2041 LLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSIS 2208
LLYK+AAR+LREYHGVPS+TA LEKTM LL+LRP RLV QGLAP+ + ++ +
Sbjct: 52 LLYKAAARNLREYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKXIKNNNSNTT 107
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5JCF2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCF2_9PHAE) HSP 1 Score: 72.4 bits (176), Expect = 2.070e-10 Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = -2
Query: 2026 LLYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLLRGGTSISSPDND 2208
LLYK+AAR+LR+ H V S+TA LEKTM LL+LRP RLV QGLAP++LL+G ++ D D
Sbjct: 181 LLYKAAARNLRDVHDVLSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLKGKSAADDADAD 241
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 67.4 bits (163), Expect = 6.070e-8 Identity = 34/48 (70.83%), Postives = 40/48 (83.33%), Query Frame = -2
Query: 2062 LYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLL 2205
LYK AAR+LREY+GVPS+TA L KT+A L+L PRRLV QGLAP+ LL
Sbjct: 107 LYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLL 154
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 65.1 bits (157), Expect = 3.050e-7 Identity = 33/48 (68.75%), Postives = 40/48 (83.33%), Query Frame = -2
Query: 2062 LYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLL 2205
LYK AAR+LREY+GVPS+TA L KT+A L+L P+RLV QGLAP+ LL
Sbjct: 125 LYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLL 172
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 4.380e-7 Identity = 32/48 (66.67%), Postives = 39/48 (81.25%), Query Frame = -2
Query: 2062 LYKSAARSLREYHGVPSITADSLEKTMALLELRPRRLVVQGLAPEKLL 2205
LYK AAR+LREY+GVPS+T L KT+A L+L P+RLV QGLAP+ LL
Sbjct: 123 LYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLL 170 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig87.14923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig87.14923.1 >prot_P-fluviatile_contig87.14923.1 ID=prot_P-fluviatile_contig87.14923.1|Name=mRNA_P-fluviatile_contig87.14923.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=499bp MMVLVLWCLSRPPSSSAAAAAGDGRSGRDRGDPSHRTAAGCRGRLQTRRRback to top mRNA from alignment at P-fluviatile_contig87:55147..57388+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig87.14923.1 ID=mRNA_P-fluviatile_contig87.14923.1|Name=mRNA_P-fluviatile_contig87.14923.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2242bp|location=Sequence derived from alignment at P-fluviatile_contig87:55147..57388+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig87:55147..57388+ >mRNA_P-fluviatile_contig87.14923.1 ID=mRNA_P-fluviatile_contig87.14923.1|Name=mRNA_P-fluviatile_contig87.14923.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2994bp|location=Sequence derived from alignment at P-fluviatile_contig87:55147..57388+ (Porterinema fluviatile SAG_2381)back to top |