mRNA_P-fluviatile_contig86.14917.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5JMR3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMR3_9PHAE) HSP 1 Score: 352 bits (902), Expect = 2.360e-122 Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = -2
Query: 4 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 531
VLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET
Sbjct: 10 VLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDET 185
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5JH77_9PHAE (S5A_REDUCTASE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH77_9PHAE) HSP 1 Score: 353 bits (906), Expect = 5.220e-118 Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = -2
Query: 1 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDETK 531
VLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDETK
Sbjct: 10 VLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDETK 186
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5LAK0_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAK0_9PHAE) HSP 1 Score: 336 bits (861), Expect = 8.180e-116 Identity = 163/169 (96.45%), Postives = 165/169 (97.63%), Query Frame = -2
Query: 4 RTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 510
R DPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET
Sbjct: 32 RVNQDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDET 200
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5KQE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQE4_9PHAE) HSP 1 Score: 352 bits (902), Expect = 2.650e-115 Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = -2
Query: 4 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 531
VLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET
Sbjct: 10 VLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDET 185
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5L1T0_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1T0_9PHAE) HSP 1 Score: 352 bits (902), Expect = 2.850e-114 Identity = 172/176 (97.73%), Postives = 174/176 (98.86%), Query Frame = -2
Query: 4 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 531
VLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFY AWAEYLEETKLPPERILNTDET
Sbjct: 10 VLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYKAWAEYLEETKLPPERILNTDET 185
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5JUK8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK8_9PHAE) HSP 1 Score: 308 bits (789), Expect = 4.890e-100 Identity = 151/170 (88.82%), Postives = 158/170 (92.94%), Query Frame = -2
Query: 22 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERI 531
VLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAA+TYGLPLASLHDRVK KVAIDA+VGPGTVLSKE EDFVEDVLIYASRHFLLLGRREL+DAVRN+CSDGRKVPW+PDKGPGDSWLEG M RHPGLSERATHI EAN INED E RL+AFY AWAEYL ETKLPPE +
Sbjct: 48 VLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAAKTYGLPLASLHDRVKKKVAIDAKVGPGTVLSKEGEDFVEDVLIYASRHFLLLGRRELKDAVRNICSDGRKVPWNPDKGPGDSWLEGVMTRHPGLSERATHINEANPINEDDERRLEAFYKAWAEYLAETKLPPEXV 217
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5JPC4_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC4_9PHAE) HSP 1 Score: 271 bits (694), Expect = 8.310e-91 Identity = 133/176 (75.57%), Postives = 147/176 (83.52%), Query Frame = -2
Query: 4 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 531
+LL SMGRTRVDPEQAQKAVDAVRSG+MS+R AA YGL SLH R+ NKVAIDA+V PGTVLSKEEE+FVEDVL+YASR LLLGRREL+DAVR +C DGRKV WDPDKGPGD WL+ F+ RHP L ERATHIYEANRINED E RL+AFY W YL ETKL +RI+NTDET
Sbjct: 10 LLLPSMGRTRVDPEQAQKAVDAVRSGQMSVRGAAEAYGLSRNSLHSRLTNKVAIDAKVAPGTVLSKEEEEFVEDVLVYASRRLLLLGRRELKDAVRKICLDGRKVRWDPDKGPGDRWLQWFLKRHPELPERATHIYEANRINEDDESRLEAFYETWDAYLSETKLTSDRIMNTDET 185
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5K5E3_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5E3_9PHAE) HSP 1 Score: 269 bits (688), Expect = 4.590e-88 Identity = 149/242 (61.57%), Postives = 156/242 (64.46%), Query Frame = -2
Query: 4 RTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEG-------------------------------------------------------------------------FMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEETKLPPERILNTDET 510
R RVDPEQAQK VDAVRSG+MSLRVAA+TY LPLASLHDRVK +VAIDA VGPGTVLSKEEE FVEDVLIYASRHFLL GRREL+ AVRN+CSDGRKVPW+P KGPGDSWLEG FMARHPGLSERATHIYEANRINED EPRL+AFY A AEYL ETKLPPERILNTDET
Sbjct: 70 RPRVDPEQAQKTVDAVRSGQMSLRVAAKTYRLPLASLHDRVKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKGPGDSWLEGXKKEVAIDASVGPGTVLSKEEEGFVEDVLIYASRHFLLSGRRELKYAVRNICSDGRKVPWNPAKGPGDSWLEGFMARHPGLSERATHIYEANRINEDDEPRLEAFYKARAEYLAETKLPPERILNTDET 311
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5L2N3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2N3_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.170e-84 Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = -2
Query: 151 VLLLSMGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPG 531
VLLLSMGR RVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRN+C+DGRKVPWDPDKGPGDSWLEGFMARHPG
Sbjct: 10 VLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPG 136
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Match: A0A6H5KK08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK08_9PHAE) HSP 1 Score: 262 bits (670), Expect = 4.280e-84 Identity = 128/158 (81.01%), Postives = 137/158 (86.71%), Query Frame = -2
Query: 43 MGRTRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPLASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRRELRDAVRNVCSDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRINEDGEPRLQAFYNAWAEYLEET 516
MGR RVDPE+AQKA+DAVRSGEMS RVAA TYGL SLH RVK +VAIDARVGPGTVL KEEEDFVEDVL++A RHFLLLGR EL++AVR +C DGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHI EANRINED EPRL+AFY W L ET
Sbjct: 1 MGRARVDPERAQKAIDAVRSGEMSFRVAADTYGLNPTSLHRRVKKEVAIDARVGPGTVLCKEEEDFVEDVLMHAFRHFLLLGRGELKEAVRKICLDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHICEANRINEDDEPRLEAFYETWEACLAET 158 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig86.14917.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig86.14917.1 >prot_P-fluviatile_contig86.14917.1 ID=prot_P-fluviatile_contig86.14917.1|Name=mRNA_P-fluviatile_contig86.14917.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=137bp TCLIRVEDAFRRELGLLQVLRPCVVESLKARLAVFVNPVCFVDVGGSLRQback to top mRNA from alignment at P-fluviatile_contig86:146231..146762+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig86.14917.1 ID=mRNA_P-fluviatile_contig86.14917.1|Name=mRNA_P-fluviatile_contig86.14917.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=532bp|location=Sequence derived from alignment at P-fluviatile_contig86:146231..146762+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig86:146231..146762+ >mRNA_P-fluviatile_contig86.14917.1 ID=mRNA_P-fluviatile_contig86.14917.1|Name=mRNA_P-fluviatile_contig86.14917.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=822bp|location=Sequence derived from alignment at P-fluviatile_contig86:146231..146762+ (Porterinema fluviatile SAG_2381)back to top |