mRNA_P-fluviatile_contig85.14890.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig85.14890.1
Unique NamemRNA_P-fluviatile_contig85.14890.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: D7G226_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G226_ECTSI)

HSP 1 Score: 402 bits (1033), Expect = 8.510e-134
Identity = 194/243 (79.84%), Postives = 216/243 (88.89%), Query Frame = 1 
Query:  487 LFGHGGAGNLDGRPPPPLQYAHGGPSGSSLPAKALVLGAALAAGGLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSADGTGKDRQKIVR 1215
            LF +   G+     P P+   HGGP GS L +KAL+LGAALAAGG+FGLFQLRLLPK+WGPWVSK+YFWPTLPFTMIRAFDNYWT+MD+TVYLGAAPVGFLGHADAL  KG+VGVINMCGEYRGPLE+YAR+GIEQLWLPTVDHEEP+LADYDRGVAFIQKW+SKGGKVLVHCKAGHGRSSAIVMAWLLA+ RN TP +VQ +M SKRRVR +LYKQLNLRL+YR LQTSADGTGKDR+ + R
Sbjct:    5 LFANAAGGDRFYGKPEPIS-PHGGPPGSPLTSKALILGAALAAGGIFGLFQLRLLPKSWGPWVSKIYFWPTLPFTMIRAFDNYWTKMDDTVYLGAAPVGFLGHADALHAKGVVGVINMCGEYRGPLEDYARLGIEQLWLPTVDHEEPELADYDRGVAFIQKWNSKGGKVLVHCKAGHGRSSAIVMAWLLASKRNTTPLEVQRQMSSKRRVRTFLYKQLNLRLFYRSLQTSADGTGKDRENVAR 246
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A6H5K222_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K222_9PHAE)

HSP 1 Score: 335 bits (859), Expect = 1.120e-107
Identity = 159/192 (82.81%), Postives = 174/192 (90.62%), Query Frame = 1 
Query:  502 GAGNLDGRPPPPLQYAHGGPSGSSLPAKALVLGAALAAGGLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATP 1077
            G    +G+P P     HGGP GS L +KAL+LGAALAAGG+FGLFQLRLLPK+WGPWVSK+YFWPTLPFTMIRAFDNYWT+MD+TVYLGAAPVGFLGHADAL  KG+VGVINMCGEYRGPLE+YAR+GIEQLWLPTVDHEEP+LADY RGVAFIQKW+SKGGKVLVHCKAGHGRSSAIVMAWLLA+ RN TP
Sbjct:   11 GGDRFNGKPEP--ISPHGGPPGSPLTSKALMLGAALAAGGIFGLFQLRLLPKSWGPWVSKIYFWPTLPFTMIRAFDNYWTKMDDTVYLGAAPVGFLGHADALHAKGVVGVINMCGEYRGPLEDYARLGIEQLWLPTVDHEEPELADYYRGVAFIQKWNSKGGKVLVHCKAGHGRSSAIVMAWLLASKRNTTP 200
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A835YX57_9STRA (Protein-tyrosine phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX57_9STRA)

HSP 1 Score: 202 bits (515), Expect = 9.720e-57
Identity = 102/186 (54.84%), Postives = 126/186 (67.74%), Query Frame = 1 
Query:  625 FGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSAD 1182
            + LFQ  LLP+  G  V+KLYFWPT+PFT+I  + NY+T MD+TV LG AP+  LGH D L   G+  V+NMC EY GP   Y R+G+ QL LP VDH EP  AD  RGVAFI++   +G +VLVHCKAGHGRS A+ M WLL+ D  ATP + Q  M S+R VRK LY+Q N++ YY  LQ   D
Sbjct:   44 YALFQKHLLPEAVGKRVAKLYFWPTMPFTLISRWSNYFTVMDDTVILGGAPLAALGHPDMLHALGVHSVLNMCDEYSGPEGAYKRLGMRQLRLPVVDHTEPTTADIVRGVAFIRECARRGERVLVHCKAGHGRSGAVAMGWLLSADARATPAKAQALMNSRRDVRKRLYRQQNVQEYYALLQRERD 229
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A7S2Y0R4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0R4_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.330e-50
Identity = 93/194 (47.94%), Postives = 125/194 (64.43%), Query Frame = 1 
Query:  601 AALAAGGLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSAD 1182
            AAL A G F LFQ  LLP        ++YFWPTLPFT ++ F + W  +DE V +G APVG LGH +AL  +G+ GV+N+C EYRGP+++Y  +G+EQL LPTVDH EP LAD +  V FI      G +V VHCKAGHGRS+A+V+ WL+  +R      +  +++  RRVRKYL+ Q N+  +Y   +   D
Sbjct:   66 AALFATGFF-LFQKSLLPPRLMRLAGRVYFWPTLPFTYLKLFPDLWNPIDEVVIMGGAPVGVLGHPEALYRQGVRGVVNLCEEYRGPVDQYRNLGMEQLRLPTVDHFEPPLADIEAAVRFIHTHAKLGNRVYVHCKAGHGRSAAVVLCWLIDQNRQEDIFSLHNKLMGIRRVRKYLFNQPNILSFYHSRRKQQD 258
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A7S2SFI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SFI2_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.740e-49
Identity = 93/201 (46.27%), Postives = 125/201 (62.19%), Query Frame = 1 
Query:  607 LAAGGLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADA----LREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSADGTGKD 1197
            +AA GL+  FQ  L P   G  V++LYFWPTLPFT +R   + WT MD+TV +G AP     H       LRE G+  V+N+C E+RGP + Y ++GI +LWLPTVDH EP L D +R V FI+ +  +GGKV VHCKAGHGRS+A+   WL     +     +Q+ MLSKR VRK LY+Q  +  + R  +T+    G++
Sbjct:   24 VAAAGLYAAFQKHLFPPEVGKVVARLYFWPTLPFTFLRRARHLWTPMDDTVIVGCAPAR---HGPVPPTRLRELGVEAVVNLCDEFRGPTKLYEQLGIAELWLPTVDHTEPSLGDLERAVDFIEDFAEQGGKVYVHCKAGHGRSAAVAFCWLAKKHPDVPLESIQQMMLSKRHVRKSLYRQPGIVAFARQCRTAKAKGGEE 221
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A662XI87_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XI87_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.900e-49
Identity = 93/189 (49.21%), Postives = 123/189 (65.08%), Query Frame = 1 
Query:  607 LAAGGLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQT 1173
            L AG LFG FQ+ LLP      V+++YF+PT PFT +    NYWT +D  V+LGAAP+ F+ H DAL  +G+  V+N+C EY GP+ +Y R+ I+QL LPT+DH EP L   +  VAFIQ+    G +V VHCK G GRS+A+   WLL   R  TP + QE +  KRRVRK LY+Q N+  +Y  L+T
Sbjct:   31 LYAGLLFGAFQMHLLPPGLARVVARVYFYPTWPFTYLARRANYWTLVDSHVFLGAAPMAFMPHVDALFARGVRAVVNLCDEYSGPVAQYKRLHIKQLRLPTLDHTEPSLQALELAVAFIQEQRDSGVRVYVHCKGGSGRSAAVAFCWLLH-HRGMTPPEAQEYLAEKRRVRKTLYRQPNILAFYDNLRT 218
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A7S3L8S0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8S0_9STRA)

HSP 1 Score: 175 bits (444), Expect = 5.280e-47
Identity = 88/196 (44.90%), Postives = 126/196 (64.29%), Query Frame = 1 
Query:  619 GLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSADGTGKDRQK 1206
            GL+ L Q  LLPK     VSK  FWPTLP T+ +   ++ T +D+TV +G AP GF+G  + L + G+ GV+N C EY+GP++ Y ++GI QL+LPTVDH EP + D    V FIQ+   +G +V VHC+AGHGRS+A V AW+L+ D +A P+ + E   + R VRK L+KQ N+R ++  L+   D    + +K
Sbjct:   25 GLYVLNQKHLLPKPLSRIVSKALFWPTLPITVAKRMGSWTTIVDDTVIIGGAPFGFVGIPEQLYDYGVRGVVNFCEEYQGPVKSYRKLGISQLYLPTVDHFEPSVKDLAATVRFIQRHKKQGSRVYVHCRAGHGRSAAGVFAWMLSQDPDADPQTLNEYFCNLRNVRKTLWKQSNVRRFHANLKEIEDDDNGEEEK 220
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A1Z5JM31_FISSO (Atypical dual specificity phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JM31_FISSO)

HSP 1 Score: 176 bits (445), Expect = 1.230e-46
Identity = 92/192 (47.92%), Postives = 123/192 (64.06%), Query Frame = 1 
Query:  622 LFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREK-GIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSAD-GTG 1191
            L+ L Q  LLPK     VSK  FWPTLP T+++    + T +DETV +G AP GF G  ++L +  G+ GVINMC EYRGPL EY R+G+++LWLPTVDH EP + D +R V FI++    G KV VHC+AGHGRS+A V AWLL+ D     + + E++   R VR  L++Q N+  ++  L    D GTG
Sbjct:   60 LYILNQSHLLPKPLSAVVSKTLFWPTLPITVLKRLGRWTTCVDETVIMGGAPFGFAGLPESLHDNHGVRGVINMCEEYRGPLREYNRLGMKELWLPTVDHFEPSIKDLNRAVRFIERHRQMGSKVYVHCRAGHGRSAAAVFAWLLSKDPTVDRKTLNEDLCKLRDVRTTLWQQPNIIQFHASLLPGDDDGTG 251
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: A0A7S3GYK8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GYK8_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.740e-46
Identity = 82/179 (45.81%), Postives = 120/179 (67.04%), Query Frame = 1 
Query:  631 LFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGL 1167
            LFQ +LLPK     VSKL+F+PT P T +    NYWT++D+T+ LG AP+  LGH  AL   G+ GV+NMC EY GP+ +Y+ +GI+QL+LPT+DH EP L      V FI++  ++G  V VHCKA HGR+++I + W++  +   T +++   + SKR+VRK L++Q N+R + R L
Sbjct:   47 LFQKKLLPKPVSKVVSKLFFYPTFPITALMRAGNYWTKLDDTLILGCAPMDILGHPTALYNLGVRGVVNMCNEYPGPIAKYSTLGIKQLYLPTLDHYEPSLEFMKAAVDFIEEHKARGELVYVHCKAAHGRAASIALCWMMKQNSGKTAKELNNVLSSKRKVRKTLFEQPNVRAFERSL 225
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BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Match: W2YZT7_PHYPR (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2YZT7_PHYPR)

HSP 1 Score: 171 bits (433), Expect = 2.020e-45
Identity = 90/201 (44.78%), Postives = 124/201 (61.69%), Query Frame = 1 
Query:  607 LAAGGLFGLFQLRLLPKTWGPWVSKLYFWPTLPFTMIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGPLEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKAGHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYRGLQTSADGTGKDRQKI 1209
            LAA  L+  FQL  LP+     V+++YF+PT P T +    NYWT +D  V LGAAP+ F+ H DAL  +G+  VIN+C EY GP ++Y R  I+QL LPTVDH EP LA  +  VAFI+    +G +  VHCK G GRS+A+ + WL+A +R  TP + Q+ +  KR VRK LY Q N+  +   +QT      ++R K+
Sbjct:   23 LAAVMLYVAFQLHFLPEGLARVVARVYFYPTWPLTYLSRRKNYWTLVDSHVLLGAAPMSFMPHVDALVSRGVRAVINLCDEYAGPEKQYRRQHIQQLHLPTVDHSEPSLAALEAAVAFIRTQKQRGVRTYVHCKGGTGRSAAVALCWLVA-NRGMTPLEAQDYLNEKRHVRKSLYLQPNVLAFCNKIQTPKSSDKQERSKV 222
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig85.14890.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G226_ECTSI8.510e-13479.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K222_9PHAE1.120e-10782.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YX57_9STRA9.720e-5754.84Protein-tyrosine phosphatase-like protein n=1 Tax=... [more]
A0A7S2Y0R4_9STRA1.330e-5047.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SFI2_9STRA1.740e-4946.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A662XI87_9STRA1.900e-4949.21Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A7S3L8S0_9STRA5.280e-4744.90Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A1Z5JM31_FISSO1.230e-4647.92Atypical dual specificity phosphatase n=2 Tax=Fist... [more]
A0A7S3GYK8_9STRA3.740e-4645.81Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
W2YZT7_PHYPR2.020e-4544.78Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig85contigP-fluviatile_contig85:69251..73796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score308.5
Seed ortholog evalue1.9e-81
Seed eggNOG ortholog2880.D7G226
Preferred namePTPMT1
KEGG rclassRC00061
KEGG koko:K03936,ko:K07297,ko:K11339,ko:K14165,ko:K19527
KEGG TC3.D.1.6
KEGG ReactionR11945
KEGG Pathwayko00190,ko01100,ko04152,ko04211,ko04714,ko04723,ko04920,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04152,map04211,map04714,map04723,map04920,map04932,map05010,map05012,map05016
KEGG ModuleM00143
GOsGO:0002791,GO:0002792,GO:0003674,GO:0003824,GO:0004439,GO:0004721,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006464,GO:0006470,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0006807,GO:0008138,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008962,GO:0009058,GO:0009966,GO:0009987,GO:0010646,GO:0010648,GO:0010817,GO:0010941,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0019637,GO:0019866,GO:0023051,GO:0023057,GO:0031090,GO:0031224,GO:0031300,GO:0031301,GO:0031304,GO:0031305,GO:0031966,GO:0031967,GO:0031975,GO:0032048,GO:0032049,GO:0032592,GO:0032879,GO:0032880,GO:0034593,GO:0034595,GO:0036211,GO:0042578,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0046676,GO:0046883,GO:0046888,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050708,GO:0050709,GO:0050789,GO:0050794,GO:0050796,GO:0051046,GO:0051048,GO:0051049,GO:0051051,GO:0051223,GO:0051224,GO:0052866,GO:0060341,GO:0061178,GO:0061179,GO:0065007,GO:0065008,GO:0070201,GO:0071704,GO:0090087,GO:0090276,GO:0090278,GO:0090407,GO:0098573,GO:0106019,GO:0140096,GO:1901564,GO:1901576,GO:1902531,GO:1903530,GO:1903531,GO:1904950,GO:2001233,GO:2001242
EggNOG free text desc.phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
EggNOG OGsKOG1719@1,KOG1719@2759
EC1.6.5.3,1.6.99.3,3.1.3.16,3.1.3.48
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01009,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-11_003580.1
Exons5
Model size2035
Cds size507
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817292.203516-UTR-P-fluviatile_contig85:69250..699611622817292.203516-UTR-P-fluviatile_contig85:69250..69961Porterinema fluviatile SAG_2381UTRP-fluviatile_contig85 69251..69961 +
1693571963.9176764-UTR-P-fluviatile_contig85:69250..699611693571963.9176764-UTR-P-fluviatile_contig85:69250..69961Porterinema fluviatile SAG_2381UTRP-fluviatile_contig85 69251..69961 +
1622817292.2708385-UTR-P-fluviatile_contig85:72979..737961622817292.2708385-UTR-P-fluviatile_contig85:72979..73796Porterinema fluviatile SAG_2381UTRP-fluviatile_contig85 72980..73796 +
1693571963.9810936-UTR-P-fluviatile_contig85:72979..737961693571963.9810936-UTR-P-fluviatile_contig85:72979..73796Porterinema fluviatile SAG_2381UTRP-fluviatile_contig85 72980..73796 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817292.213769-CDS-P-fluviatile_contig85:69961..700011622817292.213769-CDS-P-fluviatile_contig85:69961..70001Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 69962..70001 +
1693571963.9311764-CDS-P-fluviatile_contig85:69961..700011693571963.9311764-CDS-P-fluviatile_contig85:69961..70001Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 69962..70001 +
1622817292.2233307-CDS-P-fluviatile_contig85:70542..707031622817292.2233307-CDS-P-fluviatile_contig85:70542..70703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 70543..70703 +
1693571963.9403715-CDS-P-fluviatile_contig85:70542..707031693571963.9403715-CDS-P-fluviatile_contig85:70542..70703Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 70543..70703 +
1622817292.2329228-CDS-P-fluviatile_contig85:71560..716701622817292.2329228-CDS-P-fluviatile_contig85:71560..71670Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 71561..71670 +
1693571963.9513288-CDS-P-fluviatile_contig85:71560..716701693571963.9513288-CDS-P-fluviatile_contig85:71560..71670Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 71561..71670 +
1622817292.2447724-CDS-P-fluviatile_contig85:72245..723061622817292.2447724-CDS-P-fluviatile_contig85:72245..72306Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 72246..72306 +
1693571963.9618328-CDS-P-fluviatile_contig85:72245..723061693571963.9618328-CDS-P-fluviatile_contig85:72245..72306Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 72246..72306 +
1622817292.2605102-CDS-P-fluviatile_contig85:72844..729791622817292.2605102-CDS-P-fluviatile_contig85:72844..72979Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 72845..72979 +
1693571963.9717274-CDS-P-fluviatile_contig85:72844..729791693571963.9717274-CDS-P-fluviatile_contig85:72844..72979Porterinema fluviatile SAG_2381CDSP-fluviatile_contig85 72845..72979 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig85.14890.1prot_P-fluviatile_contig85.14890.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig85 69962..72979 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig85.14890.1

>prot_P-fluviatile_contig85.14890.1 ID=prot_P-fluviatile_contig85.14890.1|Name=mRNA_P-fluviatile_contig85.14890.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=169bp
MIRAFDNYWTQMDETVYLGAAPVGFLGHADALREKGIVGVINMCGEYRGP
LEEYARVGIEQLWLPTVDHEEPDLADYDRGVAFIQKWHSKGGKVLVHCKA
GHGRSSAIVMAWLLATDRNATPRQVQEEMLSKRRVRKYLYKQLNLRLYYR
GLQTSADGTGKDRQKIVR*
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mRNA from alignment at P-fluviatile_contig85:69251..73796+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig85.14890.1 ID=mRNA_P-fluviatile_contig85.14890.1|Name=mRNA_P-fluviatile_contig85.14890.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4546bp|location=Sequence derived from alignment at P-fluviatile_contig85:69251..73796+ (Porterinema fluviatile SAG_2381)
GCGCTTTCCGATAAAATGGTGGAGACGCTCTCGAACCCCTCGCCGCAAGC
AGTTTTCGGTGCAACACCAGCGGGAGAGGAGCATGTTGCACACACCAGCA
GAAGAGAACGATGAAAAATTTGCGAAACATGCAGTCATTCTTCGGTGGTG
CGCTACCTACGGGTGACACTTCTCGTGCTGTTGTTGATCCTCGCCCCCCT
AGACCTACAGACACATACCCAGACCCCAGACACACGCTCCCAGGCCAAGA
TACACTGCCTGGTCCAGACTCGTTAGTTCTTGTCGGGGCGGCTGGTATGT
ACTCCCGCGTGCTTAAAAGTACAAGTTTGATCGGCAAACTGCTATGGATG
TCCTACCACTATGTCGCTGTTTGTCATGAACAACAAATGCTGCTGAGTGA
AAGCGTTTCGCATCCATCTGGGTTCCTATTCGTCGCCCGTTCCCGTTCCC
GTTCCCGCCCCCCGGTCGCCAACACCCGTTGCGCATCTGTTCGGCCATGG
CGGCGCAGGAAACTTAGATGGGAGACCTCCACCGCCGTTGCAGTATGCCC
ATGGAGGCCCCTCGGGGAGCTCCTTGCCGGCGAAGGCGCTCGTCCTAGGA
GCGGCTCTGGCAGCGGGGGGGCTGTTTGGGCTGTTCCAGCTCCGCCTTCT
CCCGAAGACCTGGGGCCCTTGGGTGTCCAAGCTGTATTTTTGGCCCACGC
TGCCCTTCACCATGATTCGGGCATTCGACAACTACTGGACACAGATGGAT
GGTGCGAGAATATCTGCTCTTCGCATTTTGTGTTCACCATTCTCCACACT
TTATCTGCCACCTGAACGGCAGCAAGGGCATCGAAAACCTAGAAATGTCC
GAGGGTGTCGCGACGGAGTGTATCTCGGCTCATCATGCTGTCGGCTTGTC
CATATATCAACATTTGCATTGCATTACTCGCTGTCTACTGGACAAAGGAC
TTGAGCAACGAGGAATTTCTTCGATACGCCACGTTCGCCCCTGCGGGCAT
CAGCTTCGCGCATTCATGAGCCGCCCAGCGCTGCAACGCCCCCGCACCCC
TCAACTTCCACGCACCCATGCGATGCCAAGACCCTGGCCGTAGACGTAGC
TCGACCAAGACTCCCACCCACCGCACGAGTGTATCAAGATAAGACACGAA
CAGCTCTCTGACTGACGCCTGCCTGCCTACACCCACCGGACTTTCCAACT
GACCTGTCTTCCCCAAAGTATTCCGGCTTCTCCCTCGATTTTTTCGTCAA
TTCGATCCGATTCGAATCCGCTGCACGCCGCCTTGTGCATAGAGACGGTG
TACCTCGGTGCGGCGCCCGTGGGATTCCTAGGACACGCCGATGCACTCCG
TGAGAAGGGGATCGTTGGGGTGATCAACATGTGCGGCGAGTACCGGGGGC
CTCTGGAGGAGTACGCACGCGTTGGAATCGAGCAGCTTTGGCTTCCCACC
GTGGTGAGATACATGCTCGTGTTGCCGATTTCATTTTACGGACTCGCACG
TCGTGAGGCCTCTGTCCGTGCGATTGTTGACGACGTTTTGGTTGCGTGAT
GGTTGAGTACCGTTGAGAGTCGTTTAGCTTCAGTGAGTGTTGTCGAGGGC
CTTGAGTACCGTTGAGTGTCTTTGAGTGTAGTTGAGGGCGATTGAGATGC
GTGATGCTGGTGTCCCGACTTCCTCGTGATTTTTGTTCGAAGTTCCACCG
TTGGCGAGGTTGAGGCGCGGGTCACTTGCGATTAGGGCTCTATCTCGGAG
TCGGGGCAGAAGGTCAGAGAATATGGGAGCGGATGGGAATGGGACTAACG
ACGAGTTCGGGCTAAAACAAGTTGCACAAAAGGGTACCGTACTACACACG
GGGTTCGGTTGTCCATCCGATCAGGAAGACAACGCCTAGAGTTTGGAGGA
TAAAGTCTAGAGTTCGTTCCAAACAGGAACACTGCAGCAAGACCGCACAA
GTCCCTCCCGCCCTCCATCAAACCGAAAGCATAGAAAGTCGGAAAATTCG
TTCGGATTTTAGCCTCCCTTCAACGGTGCCCTTGGCACATTCCTGGCTCG
CCGCCGGAATGTCTTTGGCGAGACGTATCCCTGCGCCGAGAGTCTCCGCT
TCATGTCTCCATTCGTTTCGCAGAAGACAACATGCAAGGACAAGCAAGGT
ATCCTCTCTTTTATTGTCCACGCCGGCTCGAAGCGTCGTCGAATAATCTC
TGTTGCAAAAGGTAATTGACATGATCAATGCGACATTCTCCCCCTCGATG
CTCCGCCGTGCTAAGCCCTGTTGTGTTCGTTGTCGCTGCTGTCGACTTTG
CCGCCATCAGGACCACGAGGAGCCCGATTTAGCGGACTACGACCGCGGCG
TCGCGTTCATCCAGAAGTGGCACAGCAAGGGGGGCAAGGTCCTCGTGCAC
TGCAAGGCTGGGCATGGCAGGTAGGTTGGGTGGCCATGCGACGTGGCAAA
AACTGGAAACGCTTGCCACGATTTTCCCGGAGGGTGTTTGAGCACAAGCA
TCAGAATTTGCGGTGGCAGTGGAAATCTTTGCTCCGTGATTGAGTCTGCC
CTGCCTGTCTTGTCCTGCCTTGGCTTGCCATGTTCCGACATGATTTCCCC
TACCTTTATTTTATCCCTCCCCGTGAAGGACATTCAAAACACGCTTTATT
TTTGCGTTATGGCGCATCTATTTGAGGGCGAGAGGGCTGAACTCTTTTTG
CTTCCAACGTCGAAGGTAAACACCGCACGAGGGCGGGTCGTTGCCTTGGG
AAGAGCAACCCTTCTGTATGACCTCGGATCAGATCTCTGGCAAGGCGTTT
TTCGAGCTATGGATAAAAATGCAAAGATGTGCCCGCAGGAGCAGGGTCGA
GTGTTGTTTGTTGGCTGAAGATTGGCCAAATCGTGAAGTACAAGCCCCTT
GCCTCTTGTGCCACCGAGCCAAGCAGCGCGACCGATATGAATTCATTAAT
CGGAGCTGGCTCCTTTTGACGAACATAATTGCGTATCTGCCCCAGGAGCT
CCGCGATCGTGATGGCCTGGCTGCTTGCGACCGATAGGAATGCCACCCCC
CGCCAGGTGAGTGATAAATCTACGCTGTAGCTATCTCTCATTCGGTTCGA
AAGAGCTGCTGTTGATGTACTTGCCTTGATTCGGTGACGTTTTCCCATGA
TGAACCGCGTTGGAGAACGCGATGCCCGCCGATGCACGGATGGATGAGTG
GTGGCACGTTTGATTGGAGCTGGTAGGTGGTGTCGTAGAATCGTTTCGTT
TTCAGGTCGTGTTCTTTTCTCCCCAGTGCAATCCCTTCCATCCGGTTGAC
TCGCACAGGCTGGTCAGTCCCTGCGAAGCTTGAGCCTTTCCCCAAGAGCC
CCCTCCTTGTTGGATATGGCAAAGCCGTTGATAGGCATTGCTGTTGGTAC
AGAAACATCGAACGCAAGAGATAAGCTTGCGATCATTCCACGTGGACCGT
CTTGTAAAATAGCGTTCGCAGCGCTCATAGCACCTCCTTTACCTTTTGTT
GTTCAGGTGTCGCCCGCTCTCTTTTCCCTATACGTGTGTGTCGCCTTATC
CTCGCATACCCTCACTCTCGCTCTTTCATACGACGAGTGCGCAGGTTCAG
GAAGAAATGTTGTCGAAACGAAGGGTACGCAAGTACCTCTACAAGCAGCT
CAACTTGCGGCTTTATTACCGGGGCCTCCAGACATCGGCGGACGGGACCG
GGAAGGACCGACAAAAAATCGTCAGATAGCGACCCATCTCCCCCCCCCCC
ACGAAACGAGTCACGGGGCAATCCTTACTGCAGTCGGCGAGTTCGCCTGT
CTTGTGTTTTCCGAACCTCGTTCCTTGCTTTCATGTTGCCCTCTGCAGGG
GGCGGGATCAGTCCCGGGTGGGGACAGGCTGAGGAGTCCATTTGTCTTGC
TCTCAGTGTGCACATATCTAGAGCTGACGGACGCAATTTTCGTTCGTGTC
CGGCGGGAGGATCATGGCTAGCGGTGACCGCTGCGGTTGTGCTCGCTATC
TAACTCCTTGTTTTTAGGCGAGGGGTTTAGGCTAGGCAAAGGCTAGCTGC
AGGGCCTAGGCGAGGCGAGGGCTGGGCTAGGCGAGGGCTAGAAGAGTGCT
AGTGCAACATGCTCTGCCTTGTTTTGCTTCTCGTGTGCTGCCCAGCAGCG
CCAGAATGGGTGCACACGCATCGTCGCTGAACCTTGCTCTTTGCGGACAA
TCCTCGCAGGCACAATGCAATATTTCGACCATGATAAACGGAAAAAAATC
GTCACATGAACACACTATTTCTTCAAATTTCGGGAGTGGGACGAGTGGCG
TACAACGTTCTGCTGCTAAAATGCGGAGATGAAACATTGATTTTGTACTT
TGTGTTTTCTGTTCTTGAACGAGAGAAACATATTCGTCGCGCCTATCGTA
AATAATTTGAACTCACGGAAGAAGCGTCGGTTTGCCAGCCCCCTGGAGAT
GGGAAGATACCATCTCAATATATCGAAGGCAGTAATCTAAGGCACATGTC
GGAGGGATATCGAAAACGAGTTGAAGAGCGTCGGCGGGAGAGAGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig85:69251..73796+

>mRNA_P-fluviatile_contig85.14890.1 ID=mRNA_P-fluviatile_contig85.14890.1|Name=mRNA_P-fluviatile_contig85.14890.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1014bp|location=Sequence derived from alignment at P-fluviatile_contig85:69251..73796+ (Porterinema fluviatile SAG_2381)
ATGATTCGGGCATTCGACAACTACTGGACACAGATGGATGATGATTCGGG
CATTCGACAACTACTGGACACAGATGGATGAGACGGTGTACCTCGGTGCG
GCGCCCGTGGGATTCCTAGGACACGCCGATGCACTCCGTGAGAAGGGGAT
CGTTGGGGTGATCAACATGTGCGGCGAGTACCGGGGGCCTCTGGAGGAGT
ACGCACGCGTTGGAATCGAGCAGCTTTGGCTTCCCACCGTGAGACGGTGT
ACCTCGGTGCGGCGCCCGTGGGATTCCTAGGACACGCCGATGCACTCCGT
GAGAAGGGGATCGTTGGGGTGATCAACATGTGCGGCGAGTACCGGGGGCC
TCTGGAGGAGTACGCACGCGTTGGAATCGAGCAGCTTTGGCTTCCCACCG
TGGACCACGAGGAGCCCGATTTAGCGGACTACGACCGCGGCGTCGCGTTC
ATCCAGAAGTGGCACAGCAAGGGGGGCAAGGTCCTCGTGCACTGCAAGGC
TGGGCATGGCAGGACCACGAGGAGCCCGATTTAGCGGACTACGACCGCGG
CGTCGCGTTCATCCAGAAGTGGCACAGCAAGGGGGGCAAGGTCCTCGTGC
ACTGCAAGGCTGGGCATGGCAGGAGCTCCGCGATCGTGATGGCCTGGCTG
CTTGCGACCGATAGGAATGCCACCCCCCGCCAGGAGCTCCGCGATCGTGA
TGGCCTGGCTGCTTGCGACCGATAGGAATGCCACCCCCCGCCAGGTTCAG
GAAGAAATGTTGTCGAAACGAAGGGTACGCAAGTACCTCTACAAGCAGCT
CAACTTGCGGCTTTATTACCGGGGCCTCCAGACATCGGCGGACGGGACCG
GGAAGGACCGACAAAAAATCGTCAGATAGGTTCAGGAAGAAATGTTGTCG
AAACGAAGGGTACGCAAGTACCTCTACAAGCAGCTCAACTTGCGGCTTTA
TTACCGGGGCCTCCAGACATCGGCGGACGGGACCGGGAAGGACCGACAAA
AAATCGTCAGATAG
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