|
|
Homology
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI) HSP 1 Score: 352 bits (902), Expect = 1.110e-114 Identity = 181/233 (77.68%), Postives = 198/233 (84.98%), Query Frame = 1
Query: 1 MFKTIALAALAALMGADAFVSPVSTSFSGSAVAHK-TAAASRAQPMRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
M K +ALAALAAL GADAFVSPV+TSFSGSAVA + TA+ + ++ M+MS++++VFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVP GV AKDAIGNEVTVESWLATH GSRELAEGIKGDATYLVVTEDKK+QDYGIVAVCTHLGCVVPWNKAENKF+CPCHGSQYD TGK V+RGPAPLSLALSHVEE DGKV FK+W ETDFR + PWW
Sbjct: 1 MIKAVALAALAALFGADAFVSPVATSFSGSAVAQRPTASRATSKAMKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGK-------VIRGPAPLSLALSHVEEVDGKVIFKEW--KETDFRTGDKPWW 224
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.220e-90 Identity = 150/216 (69.44%), Postives = 168/216 (77.78%), Query Frame = 1
Query: 49 DAFVSPVSTSFSGSAVAHKTAAASRAQPMRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
AFV+P +SF+G+ V K S A+ MSA++D FVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP +G AGGGVIA+DA+G +VTVE WL TH GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+A GK VVRGPAPLSLALSH++ GKV FK W TETDFR EAPWW
Sbjct: 18 SAFVAP--SSFAGAKVVSKAVTKSVARTS-MSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGK-------VVRGPAPLSLALSHIDTESGKVVFKPW--TETDFRTGEAPWW 221
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA) HSP 1 Score: 284 bits (726), Expect = 2.070e-88 Identity = 144/214 (67.29%), Postives = 168/214 (78.50%), Query Frame = 1
Query: 55 FVSPVSTSFSGSAVAHKTAAASRAQPMRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
FV+P ++F+G+ V K A + + ++MSA++D FVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP +GGAGGGVIA+DA+G +VTVE W+ATH GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+ GK VVRGPAPLSLALSH+E G V FK W TETDFR EAPWW
Sbjct: 20 FVAP--SAFTGARVLSKPVAQA-SSAIKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGK-------VVRGPAPLSLALSHIETDTGNVVFKPW--TETDFRTGEAPWW 221
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA) HSP 1 Score: 273 bits (698), Expect = 3.820e-83 Identity = 133/203 (65.52%), Postives = 154/203 (75.86%), Query Frame = 1
Query: 109 AAASRAQPMR-------MSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
AAA RAQP+R M+AS+D FVPDMDRR MN IL S+GV LG+AVPYI+FFVP GSGG G G IAKDA+GN+VT WL TH AG+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KF+CPCHGSQY+ GK VVRGPAPLSLAL+HVE DGKV F W TETDFR EAPWW
Sbjct: 105 AAAFRAQPLRAGRRAMTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGK-------VVRGPAPLSLALAHVENKDGKVVFTPW--TETDFRTGEAPWW 298
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA) HSP 1 Score: 270 bits (691), Expect = 5.390e-83 Identity = 128/188 (68.09%), Postives = 150/188 (79.79%), Query Frame = 1
Query: 133 MRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
M + ++ FVPDMDRR MN IL GS+G+NV GLAVPYIAFFVP GGAGGG+ AKDA+G++VTV+ WL+TH AG R L +G+KGDATYL+V EDK I++YG+ AVCTHLGCVVPWNKAE+KFICPCHGSQYD TGK VVRGPAPLSLAL+HV+E+DGKV W TETDFR + APWW
Sbjct: 58 MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGK-------VVRGPAPLSLALAHVKESDGKVLLTPW--TETDFRTDTAPWW 236
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A6H5J703_9PHAE (Rieske domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J703_9PHAE) HSP 1 Score: 260 bits (665), Expect = 7.320e-80 Identity = 132/187 (70.59%), Postives = 154/187 (82.35%), Query Frame = 1
Query: 1 MFKTIALAALAALMGADAFVSPVSTSFSGSAVAHKTAAASR--AQPMRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKAS 555
MFK IA AAL A GADAFVSP +++FSG A + + ++R + +RM A+ D FVPDM+RRTAMNLILAGS+GV+V GLAVPY++FFVPP G G V AKD+ GNEVTV+SWLATH AGSR+LAEGIKGDATYL+VTEDKKIQDYGIVAVCTHLGC+VPW + ENKFICPCH S YD+TGKAS
Sbjct: 1 MFKIIAFAALMAPTGADAFVSPATSTFSGGITAQRISTSARPATKLVRMDANKDDFVPDMNRRTAMNLILAGSVGVSVFGLAVPYLSFFVPPSESGRGSRVTAKDSDGNEVTVKSWLATHTAGSRDLAEGIKGDATYLMVTEDKKIQDYGIVAVCTHLGCLVPWYEDENKFICPCHNSMYDSTGKAS 187
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA) HSP 1 Score: 250 bits (639), Expect = 9.660e-76 Identity = 125/191 (65.45%), Postives = 142/191 (74.35%), Query Frame = 1
Query: 139 MSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPP-GSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTED----KKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
MSA+D+ +VPDM RR A+NLIL GV VLGLA+PY+A FVP GG G V+A+DA+G EVT E WLATH GSREL EG+KGDATYL+V +D K I+D GIVAVCTH+GCVVPWN AENKFICPCH SQYDA G+ VVRGPAPLSLALSHV+ GKV + W TETDFR EAPWW
Sbjct: 26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGR-------VVRGPAPLSLALSHVDTGSGKVLLRPW--TETDFRTGEAPWW 207
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT) HSP 1 Score: 249 bits (637), Expect = 2.750e-75 Identity = 136/232 (58.62%), Postives = 158/232 (68.10%), Query Frame = 1
Query: 1 MFKTIALAALAALMGADAFVSPVSTSFSGSAVAHKTAAASRAQPMRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
MF+ I LAA L A + SP + + S SA+A RA P+ M+A+DD FVPDM+RR MN +L G+ V L LA Y FF PPGS GV A DA+G++VTVE WLATHPAG R+L EG+KGDATYL+VT DKKI+ Y + AVCTHLGCVVPWN A+ KFICPCHGSQYD+TGK VVRGPAPLSLAL+HV GKV W TETDFR APWW
Sbjct: 1 MFRQILLAACT-LAAASGYASPRAVAPSRSALA----TTHRATPL-MAAADDGFVPDMERRVIMNALLVGATAVPGLWLAGGYAYFFAPPGSXXXXXGVTAHDALGDDVTVEKWLATHPAGDRKLVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGK-------VVRGPAPLSLALAHVNGDSGKVVLSTW--TETDFRTGLAPWW 217
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA) HSP 1 Score: 243 bits (620), Expect = 5.090e-72 Identity = 111/182 (60.99%), Postives = 132/182 (72.53%), Query Frame = 1
Query: 151 DDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
DD F+PDM RR MNL+LAG++G+NV +PY+ FFVPP GG A DA+G+E+ + WL TH G R L +G+KGDATYL+VTE+ I+ YG+ AVCTHLGCVVPWNKA NKFICPCHGSQYD+TGK VVRGPAPLSLAL+HVE DGK+ F+ W TE DFR PWW
Sbjct: 99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGK-------VVRGPAPLSLALAHVENDDGKIVFETW--TEKDFRTGLDPWW 271
BLAST of mRNA_P-fluviatile_contig84.14883.1 vs. uniprot
Match: A0A5P4NB97_9CHLO (Plastoquinol--plastocyanin reductase n=1 Tax=Chlorella ohadii TaxID=2649997 RepID=A0A5P4NB97_9CHLO) HSP 1 Score: 239 bits (611), Expect = 1.330e-71 Identity = 120/219 (54.79%), Postives = 148/219 (67.58%), Query Frame = 1
Query: 40 MGADAFVSPVSTSFSGSAVAHKTAAASRAQPMRMSASDDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVIAKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSLALSHVEETDGKVTFKQWWVTETDFRNNEAPWW 696
M A A +S + +F A + AA RA + +A+ VPDM +R MNL+L G++G +GLA PY FFVPP +GG GG +AKDA+GN+V +WLATH G R L +G+KGDATYL+V + I+ YG+ AVCTHLGCVVPWNKAENKF+CPCHGSQY+A GK +RGPAPLSLAL+H + D VTF W TETDFR EAPWW
Sbjct: 1 MAAQAVLSSKAAAFQARA---QRPAARRASLVVRAAAASAEVPDMGKRQLMNLLLLGAVGAPAVGLAGPYALFFVPPSAGGGAGGTVAKDALGNDVKATTWLATHAVGDRSLTQGLKGDATYLIVNNEGAIEKYGLNAVCTHLGCVVPWNKAENKFMCPCHGSQYNAEGKK-------IRGPAPLSLALAHCDVNDDIVTFTDW--TETDFRTGEAPWW 207
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 348.2 |
| Seed ortholog evalue | 3e-93 |
| Seed eggNOG ortholog | 2880.D7FL45 |
| Preferred name | PETC |
| KEGG rclass | RC01002 |
| KEGG ko | ko:K02636 |
| KEGG Reaction | R03817,R08409 |
| KEGG Pathway | ko00195,ko01100,map00195,map01100 |
| KEGG Module | M00162 |
| GOs | GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006091,GO:0006950,GO:0006952,GO:0008150,GO:0008152,GO:0009055,GO:0009314,GO:0009416,GO:0009507,GO:0009512,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009767,GO:0009941,GO:0009987,GO:0010196,GO:0015979,GO:0016020,GO:0016491,GO:0019684,GO:0022900,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0042742,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046028,GO:0050896,GO:0051704,GO:0051707,GO:0055035,GO:0055114,GO:0070069,GO:0071944,GO:0080167,GO:0098542,GO:1990066 |
| EggNOG free text desc. | oxidoreductase activity, acting on diphenols and related substances as donors |
| EggNOG OGs | COG0723@1,KOG1671@2759 |
| EC | 1.10.9.1 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko00194,ko01000 |
| Hectar predicted targeting category | chloroplast |
| Ec32 ortholog description | Cytochrome b6-f complex iron-sulfur subunit |
| Ec32 ortholog | Ec-05_006690.1 |
| Exons | 5 |
| Model size | 1977 |
| Cds size | 702 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817291.3873498-CDS-P-fluviatile_contig84:342001..342106 | 1622817291.3873498-CDS-P-fluviatile_contig84:342001..342106 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 342002..342106 + |
| 1693571960.0868776-CDS-P-fluviatile_contig84:342001..342106 | 1693571960.0868776-CDS-P-fluviatile_contig84:342001..342106 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 342002..342106 + |
| 1622817291.3977346-CDS-P-fluviatile_contig84:344166..344451 | 1622817291.3977346-CDS-P-fluviatile_contig84:344166..344451 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 344167..344451 + |
| 1693571960.1008873-CDS-P-fluviatile_contig84:344166..344451 | 1693571960.1008873-CDS-P-fluviatile_contig84:344166..344451 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 344167..344451 + |
| 1622817291.4070656-CDS-P-fluviatile_contig84:347922..348102 | 1622817291.4070656-CDS-P-fluviatile_contig84:347922..348102 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 347923..348102 + |
| 1693571960.1152055-CDS-P-fluviatile_contig84:347922..348102 | 1693571960.1152055-CDS-P-fluviatile_contig84:347922..348102 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 347923..348102 + |
| 1622817291.4168317-CDS-P-fluviatile_contig84:348992..349078 | 1622817291.4168317-CDS-P-fluviatile_contig84:348992..349078 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 348993..349078 + |
| 1693571960.1265388-CDS-P-fluviatile_contig84:348992..349078 | 1693571960.1265388-CDS-P-fluviatile_contig84:348992..349078 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 348993..349078 + |
| 1622817291.426176-CDS-P-fluviatile_contig84:349689..349735 | 1622817291.426176-CDS-P-fluviatile_contig84:349689..349735 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 349690..349735 + |
| 1693571960.1352427-CDS-P-fluviatile_contig84:349689..349735 | 1693571960.1352427-CDS-P-fluviatile_contig84:349689..349735 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig84 349690..349735 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817291.4354596-UTR-P-fluviatile_contig84:349735..351010 | 1622817291.4354596-UTR-P-fluviatile_contig84:349735..351010 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig84 349736..351010 + |
| 1693571960.1444535-UTR-P-fluviatile_contig84:349735..351010 | 1693571960.1444535-UTR-P-fluviatile_contig84:349735..351010 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig84 349736..351010 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig84.14883.1 >prot_P-fluviatile_contig84.14883.1 ID=prot_P-fluviatile_contig84.14883.1|Name=mRNA_P-fluviatile_contig84.14883.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=234bp
MFKTIALAALAALMGADAFVSPVSTSFSGSAVAHKTAAASRAQPMRMSAS DDVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGAGGGVI AKDAIGNEVTVESWLATHPAGSRELAEGIKGDATYLVVTEDKKIQDYGIV AVCTHLGCVVPWNKAENKFICPCHGSQYDATGKASGPRGSVVRGPAPLSL ALSHVEETDGKVTFKQWWVTETDFRNNEAPWWT* back to topmRNA from alignment at P-fluviatile_contig84:342002..351010+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig84.14883.1 ID=mRNA_P-fluviatile_contig84.14883.1|Name=mRNA_P-fluviatile_contig84.14883.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9009bp|location=Sequence derived from alignment at P-fluviatile_contig84:342002..351010+ (Porterinema fluviatile SAG_2381) ATGTTCAAGACCATCGCACTCGCGGCCCTCGCGGCACTCATGGGTGCGGA
TGCCTTCGTCTCTCCGGTGTCTACCAGCTTTTCCGGTAGCGCGGTTGCCC
ACAAGGTGAGATTTTTTTGTTCGGGGCCTTCGCTTTTGTTGAGCGGGTGT
GTGTGCTGACGAAGTATGGCGAGCGGCTGGAGTTCATGTGTGGGTCGCAG
CCCAAGCCCCCCCCCTCTCGACACATGATCGCCCCCCCACGAGAGAGATG
CAAGATGTTTCATATGCGTGTGCTTCGATCTCTTATCTGTGTTGTGCTAT
TCCAGCGATAGTTGCTGTTTGCATGCAAGAAGGTTCGCTGACAGCACGCT
GTTGTTGGACGAAGCTATCCCCGTGTGGGGGAGTTGTGAGGTTCTTGAGT
CTCAACACATGCGTGTGTGAGAGGAAGGCAGCGACGAGGGCGCAGAAAAA
AAAGCAAGACCGGGCGAAGAACCTCCATCCCCACGAGGTTCAGGTAGGAG
AGCCAATTGGTCCACGAGTATTGTAGATGGCGCCACGTGAGAGAGATGCT
GAAGTTGAACGCGCCACATGTCTGCTTCAAGAGGCAGAGAAGGCCCAACC
CTACACACCCCACAGCTGGGACAGCGGTGCGACCATAGCAACGACTCCGA
ACGACACGCTACAGCGACAGCGCCGACCGCCAGGGCGGCGCCCGCAGTCT
TACGCAGAAGAAGGCCACGCAAAGACAGCAGTACCGCTGTCTCTACTAGT
TCCAGTGTCTTGCGCAAGATTTGTACTTCGTACTTCGAAGTAATGTTTTG
CAGGCACAACGTCACCGATTTTTCCAGGGCCAGATATACTCCATTTGAGA
AATGTGGCTAGAGGCTTTCACACGACAACTTCGATCTTGTCGTCCGGGCT
TAGGCCGTGCTTATGCCCATCTCTGAACGACAAGCCATGTCATGCCGACG
TGGTTTGTATCACAGATTTGTTTGAAGTTTGAGAAGTGAGCAAAGAGCAT
GCCTCTTGCAGTCACTCCCTTGCGAGTACTTGTACACAGCAGCAGCCTGA
CCAACACAAGCCTAGCAGTGATCGCGCCTGCCAGCGGGGGCAGTGATTCA
TTCCACCCTCCCCCCAACATCTATTCCATGTGCCAGGAGCAGCCGTCACC
AGCCTTTTCGTATCTTGTGTTGGTAAGTGGTACTGTTTCATTGCTTAGTT
CATGTCCCAAGCATTTCCTTCAGTAGGTTTGAGGGTAGCAGGCGTGCTAG
ACCCGCGTATTCAAGCTCTCTCGAAAAACTCGCCCCTCTGGGGCGGTTAC
CGAAGCTCGATTGAGGACGCGAACGGTAACTCAAAAGTCGATGAATGTGG
GAGGGGGTCTGCTGACGTTGCACCTTTCACACACGAGGAAAACCGGTTTC
GAGCGGTTCTGGGAACACACGCTGAACCCACCTCTGGAACCGGCTCGAAG
ATGTTACATCGTCCAGCCGGGTGAAGCCTGAAGTGTCTCACACTCTGGAC
ACCTGCTGCTCTGACTCTGAGCTGTTGAGCACCTGCCGTCCGGGACGTGC
GCCTAATACCCGCACCACGCTGGCTCTGTTCCCTGGAGATGTCCTGCCAC
AGATTTTGGTGTCGTCCGGCCGTTGGTTTTGGGATATCTCACGATCTACG
GGGTCATTGCTGTTGTCACCTCATCAGCGGGATTCGAAATCGTGTGGTTT
TACCCTCCACCGCTGGCTTACGGAGTAATGGCAGGTAAATTCAGGGCCAA
CGCAACGCAGTGAGAGTGTCAAGCCCCGAATCGTGCGCCCAGTGCACAGC
AGCAGCCGCAAGGGGCCACACTATCTCATCAGGGCGACTCTCGTGTCTAC
CGTCCATGAACCCTCTTTTGTTGCCTCTCCGTCGAGGGTTAAGAAGCTTG
TTCGCGGTTGCCGCGTCAGAAGGGACTTCCCGGTGCGGTTTAACGATAGT
GCCGAAACCATCGTAGACGCACACATGGCATGCCTGTCCCGCAGCCCCCC
GCTTCAACCCTCCTGAGGGAATAATCAATTTTTTTGTCCGAGCTAAGTAA
CAGACTCTCAACTCCCTACCGCCCGAAGACAAAGGTTAGCCTCCTAATCC
CCCCTTTCCTCTCTCCCCTCTCCCCTCTCCCCGTCCTCCTCCCCCCCCTG
TTTGACGCATCCCAGACGGCGGCCGCCTCCAGAGCGCAGCCGATGCGGAT
GTCCGCCAGCGACGATGTATTCGTGCCGGACATGGACCGCCGCACCGCGA
TGAACCTCATCCTCGCGGGGTCCATCGGCGTCAACGTCCTCGGCCTGGCG
GTCCCGTACATCGCCTTCTTCGTGCCTCCCGGCAGCGGCGGCGCCGGGGG
CGGGGTTATCGCCAAGGACGCCATCGGTAACGAGGTCACCGTAGAGAGCT
GGCTCGCGACGCACCCCGCGGGGTCCCGGGAGCTCGCCGAGGGCATCAAG
GTGAGGACGGGACAGGGGCGAGAGAGGGATCTCAGGCGGCGGGAAAGTTT
ACAGAGGTTCAGGAGAGGGGAGAGGAGGCAGGAATGGGGAGGGCGGGTAG
AGGTGGTGGAAGGGAATGGTGAGAGGGCTTGGTTGCGACGAGGGCTTGTG
GAAGGGGGGCAGCACGTGGAAATGAGGGGCAAAAAAGTGCGGGAAGAGGG
TAAGTAGTACAGCTCTCCGGTTGCCCATTCTTTTTCCAGCGTTTAGGCGC
CGCGCCTGTTTCGTTGCGAGAGTCGGCCCATCTCCCTCTAATTGTTCCAA
GTTCATCCTCGCACGCTCGACAAAACACGCAACATAACCGGCAGCAGAGC
GCTTTATGCAAAGGATATTCTGCTGACGCCGCTGCAGGTTGCACTTTATC
TCCGACGCTTTTTTTTTTTTTTTATTGCGCTTAGAGCAGCCGGACAGCAC
CCTTATCACGATAGTGACTTCGGTCTCACATGTTTTTGGCCATTACCCTT
GCCTTGAGGGTAACGCAGTCCCGGGCTTTAACACCCTGAGGCGCACATGA
GGGCCGTTTGTGAGGCTAGCTGTTGCGTAATATTTCGAATTCCGAGTGGT
GGGCTCCGCTGTGCTTTCGGCATCTTCGCAGACTGGTGAAAGCAACCTCC
CCGAGACCGGTCGACACCCTAGATAGCGAAAGACATAACACCCCAGGTCA
ATTTTCAACGCTCGATTACTCCCCGGTGTTGGAAGAAATTGCGCGAAACC
GAACGATTTGCGAAAGACCATGTCAATGGCTTTTTAGCGATTCGTCTTCA
GGTACTGGCCAACCGTCGCCGTGGTGTGGAGCTTTAATATTGGACCTAGG
GGTGTGATGTCTGGTGCTTGCGGTAGCGATGAATGACACATGACAGCACT
CTTGATTTTCCTCGCAAATACTGGGGTATGGCGAAGACCACAAAGTTGTC
CACTCGACCGCTGCCAGCTGTTCGTCCGCAAAGTTGGGTCTGAACAGCCT
GCAGCGGCAGATCGAAGTGTTCACACCGACGCCCCTGTCTCTGCGAGGGA
AGCTTCGGGTACTGATTTGGGCTATTCTCCATCGTGAAGTCTGGGAGGCA
GTGTGCAAAGCCAAACCAGTAGTGACCTTCTCCAGTACCAAGTGCCCCCT
GACATCTGTGGTTTTACCTCCGACGCCCCTTATTCCGTGGTATTCTGGAG
GGGCCCCGGTTGTTGACACTTTGAACCTTCGACCCCGATCGCGCGTTTGC
CGATATCATTGTCCAATTTGCGAGTCGTCCGCGTGGTCGTCTGATTCTGT
CGGAAATCATGTCAACGGCACACATGGTTATCGAGCGGATCAGCCGCCAC
CTGGGCGGCACGCAAGCGGGGCATGATTTCTGTTGGTGCGTTCATGGGCC
GGGCAGCCAAGGCTTATGTGGCCTCCCACCCCCTCAAATGTTTTGATACG
GGCAACGGGGGTCGCGGCAGTGAAGGCGGCTGCGGCGACACAAGCTTGGT
GTATTTTTGACAGCTGACCGGCTCAGAAACGCTGGCTATTTGGCGCAATT
TATGATGACGTATTTTGAACGGCCTGGCGGTGTGTTAACAGATCCGAAAA
CCCAGGCAGGCCGGGGGCAGGACAGATCAAGCACACTCTTACACAGGCTA
TTTTGATCACCGCCACATGTAGGGCGTCTTACCGTCCAAGGCGAGCACAA
AACACGAATGTATGTGGTGGTATACACAGGTGTCGCCACTTAGGATGGTG
CTTGCATCTTACGCCTCCATTCCTCCATTCTGGTCTCGGGGCCGGACAGA
CATGACATGCCGATGCTTTATTTTTCACGGTCTGCCTGCCCCCCGACAAC
CACAAGAAGGCAAAAGGTGAAGCACCATGCAACGTGCGACACCCCTTGCG
TGTGTTCTATTTCGTACTTCGTGGTTGCGTTGCGACGATGAGACGCGCTG
TCCACGTGGCGGTGAATTCAGGAGTAGTAGCCCGTGTTGAGACATACCGG
CCTGGAACGCCGGAATCCCCGTGCCCGACCACACTAGAGGATGGGAGGAA
CACCATGGCTTGAACGCCGGAGCGACAGCCCGCGGAATATGATGCACGAT
GTTTTTGACGATCGAGTATCGTGTGTATCGCACGCAAAGGCGGGCATGGC
AGCATGATATACAATCCTTCCGCGTGCCGATCAGGCGCCCAAGGTCGCCC
CCACCCTCACCCTCCCTGTGCCGTCCCTTGCGCGCCGTGCGCACGATCCC
CTGAAGTGGTCGCACATGACGCTCACAGCACGCACCTCCATGTCTCGTCG
GATCAGAGACTGTGTGCACCGCACTCACTGGTCGACGTGGTTTTCGCTTG
CGCGTGGTCTGGGCACGCAATTGGAGGCCGGTATGCGCCCCTTCCCCCCC
ATCCCCCCCGCGCAGTAGCCTGCGCATGAGTGGGAAAATAATGCTGTTTA
GTCGGGATCAGTAGCGGATGAGGGTTAAAGTCGGGGTAAGCGTTTTGTAT
CTCGTGACCCCGCTACTTAATCTCGATTTTTCTGCGTAGGCGGTCCCCCC
CGCGCGGTCGGGACAACGAGGCTCACTGCGGTGACAGGCAGACGCGATCG
CCTCGTCGTGTTTGTTGGATGTAGAATTGAAGTCGAGGAGGTGGTCGGCG
TATAATGCATCGTCCTCACAAGGCGTGCTCTCCATAACCACGAACGCGAA
AGTATGCGTTCAGAATCATGTGTGTTTTGCCCGCGTTGCTGGCGTTCTTC
CTCAAGCGTCAAGTGAAAAGGGGGGCTCGCCTCGCTCGCTGAAGCGACCC
CCTGTTTGCACCTCTCGCGCCCGAGGGGAGCGTCGCGCTGGCATGGAGAC
CGCTGGAACAAGCTCACTCGCCTGCCGATGCCATCCGGTCTTGTTTGTAC
CCTGCACATGATCGTGAAGGATTCACATCATGTGCACGGCACGAGCTGGA
CGGGATGGAATCAGCTGGCGCGCGTTCTATGCTCGGCATTATCAGGCCGG
TATGTGGCTCTCCCCGCTCGTTCGTGGAAACGGGGGATACGGCATTTACA
GCAGCGGCAGACACAGGCTCATACTGTGTGGACCAGGTGTAGGAGTGTTG
TCCAGCTGTGTGAAGATATTACGCACTCGCTTCCACGGCATGCACGGGAA
AACCAGTTATCAAGTGCGGAGACACAATACAGCCAGCATTTGCGCAAGGT
TATTGCGCAACCATTGCCAAAGCATGCGGGTTTCTGCCATATCTTGAAGG
ACGTGCGTGTATGTGACTCCCGATCAAGTTTCCACCCTCGATATGAAATG
CTCTCCAAACATTACCTGCCCCCCCCAAATAACAGTAAAACGGTGAACCA
TTACAGGTCCATTCAATTGATGGTTTCTGCGGCGGCGAACGTATTTGTTG
TTTGGCCGCCCACTTACCCTTGCGTATCGCTCCATTCTCCCATGCCGTGC
TTGACCTTCGCCGTCTGCCAGGGTGACGCCACCTACCTGGTGGTGACCGA
AGACAAGAAAATCCAGGACTACGGGATCGTGGCGGTGTGCACCCACCTGG
GATGCGTTGTGCCGTGGAACAAGGCGGAGAACAAGTTCATCTGCCCGTGC
CACGGCTCCCAATACGACGCCACCGGAAAGGCGAGTGGGCCCCGTGGTTC
GGTATTCCCCTGACCCTCGAACATTCCACACGTTGCTGTTCGTTGTTGGT
TGATGTCTTCTCACGTTAGCCGCAACTTACAGTAGTAATATCGGGCTCAT
GGCTTTCAATCATACATCATCACTCCACGAGAAGAAAATATGTACTCCGT
ATATCTATAGATCCACGTATTCTGCGTCCATTCACGGCTCCCCGCCTCGC
GATGAAAGGCGACTGCGACCTACTACTTCGATATTCCCCTCACGACCCTC
GAACAGTCGTAGGTAGGATGCTACTCATCCATCATCGACTCGCCGAATGC
ATCACGGCGCCTCGCGCTTGGGGAATGCGAGCGTGGGCTGGTGAAAACCC
GGCAAATCGCTCCGTTCCGGCCAGTAGGGATGCGATGTCTGTGGCCGAAC
GGTTACGGCATGCGCGACTTGAGTACGCCCGCCTCTCGCCCCTGCACCAT
ATTTCGGCTGTGATTGGATCCTGTGCACGGAAGTAGACCCGTCCAACAAA
TCCGAATGTAATTGCCTTATGACCTCACCAGGTTGTCTTTAGACTGTCGG
GGAGATTCGCTGTCGTTTTCTGCATTTGACGCTGGTTTTCTCAATCCCAA
TTTTGGGTGTCTGACTTTGACTCGTCTGTGGCTCACGATCATCGTCACTA
TCGCGGATTTTGCTCGCCGCCGCTGTGGAAACGGGACGAACGGATCATCA
CCGCACATGACTCCGCCGTGATGCCATTTCCCGGGTGTCGGAACGGATCG
CCACGTCACCCTACCGCAAACGGACGTCACTGCCCCAACGGAACGGAACT
ACGCCTTTCGGGGGGCGGCACGTCCCGTTGGCTGGAATGGAACGTCGCTT
CGCGCTGTCGGAACGGAACGGAACGGGGGCAAACCCCGCAGGTTGTCCGC
GGCCCCGCACCCCTGTCCCTCGCCCTGTCGCACGTTGAGGAGACTGACGG
CAAGGTTACCTTCAAGCAGTGGTGGGTGTCCACGGAGGAGTCGACCATTA
GCCAACTTGATTGTCTTTGTTGTTGTGTTCCTGTGCTGCCGGCTGTTTGG
ATGAAGTCTCGGTTTGTCGTTGTCGAGTGTCGTGTTTTTACTCCGGGTAT
TTAGTTGGGAATAAGGGCATCTACATAGTGTTTATGACCTCGATGTACAT
AAAGTCGACCTCTGCCAACGTATTGCTGTGATTGTTGTCATCGTTGGTTT
TGTTGTTGAATCCCCCATGTCGTTTTCTCGTTTTCTACACAACTTGTTGG
TCGCCTTCTCAAGTTCAAAGGTTCGACATGTCGGAGGTGCTGTACGTGGC
AAAGAAGTCGCAGGCGACCATTTCAACGAGTTTCATGTTTGAAAGAAGGG
CCTAGTACATTTTTTTTTTTTTTGCCGAACCGTGTGACGCTTATCGTGGT
TCTCAGACATGAAGCAGCAAGTGTCCACAACCACGGTGGCTGGTCACATT
CACCACCGTTACCGCACTGAAGTCATTACTCGGGACAGACCACCACGCAC
TTCGCACAACAACAACCCAACAAACGACCTTTCTCCCCTGTCTCTTCCGG
CGCCGTCACCCCCCCTCCCCCACCCCTCTGTGTCGCAGGACGGAGACGGA
CTTCCGCAACAACGAGGCGCCGTGGTGGACGTAAACCAGCCCATCGCTCT
CGATGTTACAGTAGAAAAATGATTGACCAACGGTTGCTGGGGGCTTTAGA
ATGACGGTACACGCAGGCACGGAAACCGCAGAGGTGGCGCGGTCGTTTTC
GTCGGGACATCTTGCCCGAGAATGACATTTTTGAGGCTGCTGGTTTCGCA
GGTTTTTTGGGCGTGGTGGATAGAAAAAGCACCGATCGCTTTTAGTCCAA
AGAGGGAGCGGAAATGGTTTTGACGAGAGAGGGATGGCGATGCCGGGGTG
GGGAAGGGGGGCGCGGAGGTCGACAAGGACCGGCCTGTATATGATATTTG
CGAGTCGGACTTTGTGGTCGTTCTGCTTTCTTGTTGTCGTGGTGGAGGCC
GTTTCGTCGAGTCATTGCGATGTGTTTGTCGAGATCGGTGAAGAGTATTT
TGTCGAAGAAGTCGGAAGTCGGAATCGATGCTGACCAACAGGAAAACTGC
GGGCGCTCCGTGTTCTAATCTTTGTCGGTACCGTCATACGCAGTAGTTAA
ACCCCCATCCGAATTGCTGGCGAGATGCGGGGCGCGCGGAGTGTTTTTTA
TAATCAAATATTACGATATCTGCGATACACGCGGCGCGGTGTTCTTTGTG
GGAGGAAATCACGGGTGAGTCCCTGTGAGATTCCGGTCTGTGGGGCTGTT
CCTTCCTCAACACTGACTAGAGCGTGAATTCTGTGACAATGTCCGCACCG
ATTTGCCATAGCTGCTTTTGTTGCCCGATGCCAGACACTTTTTTCTGTCA
GACGCTTTCCACGCGAAGACAAGCCATGGCGCGTTTCGTGCCTCACACGA
CGAAGCGCCCGAGTCTCCTTCAAGGGGAAGCGCTGTTCTCCAAAGCTTTG
CAGCTTCGATTGGAGACCCGCCGCGTGCACAAGATGACAATTTTTTTTTT
TGCTTAAGCGATCGAGCTTTGAGCATGGGCGAGCAGGAACAGGGCGGAGT
TGGACAAAGTTTTGTACGGGGATTCCCACTCCGCCGCAAAAAGACAAACA
AACGTGGGTGGTGGTGGTACAGAGCGCCCTCAGCCTTTCACATCTTACCG
TCCAGTCGGTAGTGTCCCACCCTCGCACCCCTCTCGGAAACCATGTGGCT
CGATTACTCCGCGATCAAACGGCAACAGATTGATGCGGATAAGGCTTGGG
TTAAAAGTATCTCCCCCTTGACTGCGTGAGCGGTACCAACAGCCGAGTCG
GAAGGACGAACCGCAGTGGCTCCCGTTGACAGCTGACACCAGGCAGGGCG
AACGGCCCC back to topCoding sequence (CDS) from alignment at P-fluviatile_contig84:342002..351010+ >mRNA_P-fluviatile_contig84.14883.1 ID=mRNA_P-fluviatile_contig84.14883.1|Name=mRNA_P-fluviatile_contig84.14883.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1404bp|location=Sequence derived from alignment at P-fluviatile_contig84:342002..351010+ (Porterinema fluviatile SAG_2381) ATGTTCAAGACCATCGCACTCGCGGCCCTCGCGGCACTCATGGGTGCGGA TGCCTTCGTCTCTCCGGTGTCTACCAGCTTTTCCGGTAGCGCGGTTGCCC ACAAGATGTTCAAGACCATCGCACTCGCGGCCCTCGCGGCACTCATGGGT GCGGATGCCTTCGTCTCTCCGGTGTCTACCAGCTTTTCCGGTAGCGCGGT TGCCCACAAGACGGCGGCCGCCTCCAGAGCGCAGCCGATGCGGATGTCCG CCAGCGACGATGTATTCGTGCCGGACATGGACCGCCGCACCGCGATGAAC CTCATCCTCGCGGGGTCCATCGGCGTCAACGTCCTCGGCCTGGCGGTCCC GTACATCGCCTTCTTCGTGCCTCCCGGCAGCGGCGGCGCCGGGGGCGGGG TTATCGCCAAGGACGCCATCGGTAACGAGGTCACCGTAGAGAGCTGGCTC GCGACGCACCCCGCGGGGTCCCGGGAGCTCGCCGAGGGCATCAAGACGGC GGCCGCCTCCAGAGCGCAGCCGATGCGGATGTCCGCCAGCGACGATGTAT TCGTGCCGGACATGGACCGCCGCACCGCGATGAACCTCATCCTCGCGGGG TCCATCGGCGTCAACGTCCTCGGCCTGGCGGTCCCGTACATCGCCTTCTT CGTGCCTCCCGGCAGCGGCGGCGCCGGGGGCGGGGTTATCGCCAAGGACG CCATCGGTAACGAGGTCACCGTAGAGAGCTGGCTCGCGACGCACCCCGCG GGGTCCCGGGAGCTCGCCGAGGGCATCAAGGGTGACGCCACCTACCTGGT GGTGACCGAAGACAAGAAAATCCAGGACTACGGGATCGTGGCGGTGTGCA CCCACCTGGGATGCGTTGTGCCGTGGAACAAGGCGGAGAACAAGTTCATC TGCCCGTGCCACGGCTCCCAATACGACGCCACCGGAAAGGCGAGTGGGCC CCGTGGTTCGGGTGACGCCACCTACCTGGTGGTGACCGAAGACAAGAAAA TCCAGGACTACGGGATCGTGGCGGTGTGCACCCACCTGGGATGCGTTGTG CCGTGGAACAAGGCGGAGAACAAGTTCATCTGCCCGTGCCACGGCTCCCA ATACGACGCCACCGGAAAGGCGAGTGGGCCCCGTGGTTCGGTTGTCCGCG GCCCCGCACCCCTGTCCCTCGCCCTGTCGCACGTTGAGGAGACTGACGGC AAGGTTACCTTCAAGCAGTGGTGGGTGTTGTCCGCGGCCCCGCACCCCTG TCCCTCGCCCTGTCGCACGTTGAGGAGACTGACGGCAAGGTTACCTTCAA GCAGTGGTGGGTGACGGAGACGGACTTCCGCAACAACGAGGCGCCGTGGT GGACGTAAGACGGAGACGGACTTCCGCAACAACGAGGCGCCGTGGTGGAC GTAA back to top
|