mRNA_P-fluviatile_contig84.14877.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig84.14877.1
Unique NamemRNA_P-fluviatile_contig84.14877.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: D7FL32_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL32_ECTSI)

HSP 1 Score: 569 bits (1466), Expect = 5.100e-192
Identity = 308/466 (66.09%), Postives = 333/466 (71.46%), Query Frame = 3 
Query:  168 MKRRV--AGTDGDGSSAGNGARGVSFVHLKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEAIANEAEKHSAQAEARAGESR--------------ENRRDSDVFSHGGGDGKSEDVCSCYGAGSEGECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRANAMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMNTGIGGFLRRRGGRGTRHRS 1517
            MKRRV  A  D   SSAGNGA   S   LKRLDIYSRPK EFQRAT HGA  T++LVGAVL L WRELVFSMK E VE LFVNSTI         VVF RIPC  LSLDAEDALGIPQE+LRHDVTRTRLD  GR LD  EKH MGNTLK  IA E EK                           E R   D  + G      ED C+CYGAG+EGECCRTC D+R AYRRKGWR++ A +P CAGEAL            ++P V++EGCRLAG LE    TEGNFHFAPGHRLHR AN ++F+DR+QVALESFNTTHTIN L FGD PP GHASPKH VAS +L GH KTVQDTHAMHQYFLQLVPTVYRL NG TVHSNQYSATEHL+HVH G SRGLPGVYFYY++SPVQALVEEKR+GFLAFLTGACGV+GGVY IL L+NTGI G L    G G  HRS
Sbjct:    1 MKRRVTTASRDEGSSSAGNGASRESLRKLKRLDIYSRPKREFQRATVHGAMVTIVLVGAVLVLTWRELVFSMKRETVENLFVNSTIXXXXXXXXXVVFARIPCGFLSLDAEDALGIPQEDLRHDVTRTRLDSIGRALDDGEKHEMGNTLKAVIAKEEEKXXXXXXXXXXXXXXXXXXXXXXXXXXVEQRALEDTATTG-----QEDECNCYGAGAEGECCRTCEDVRKAYRRKGWRLNPAEIPACAGEALSA----NSANTMESPPVENEGCRLAGHLEVSR-TEGNFHFAPGHRLHRHANELSFVDRIQVALESFNTTHTINTLTFGDQPPPGHASPKHAVASTVLEGHQKTVQDTHAMHQYFLQLVPTVYRLDNGETVHSNQYSATEHLKHVHDGTSRGLPGVYFYYEVSPVQALVEEKRKGFLAFLTGACGVVGGVYTILGLVNTGIDGLL----GMGKAHRS 452
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7S3H281_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H281_9STRA)

HSP 1 Score: 262 bits (670), Expect = 4.320e-75
Identity = 154/426 (36.15%), Postives = 238/426 (55.87%), Query Frame = 3 
Query:  246 LKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEAIANEAEKHSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVC-SCYGAGSEGECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRA---------NAMTF--LDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYR-LGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMNTGIGGFLR 1484
            LK++D + +   +F+  T  GA  ++I +  +  L + E+ + +KTE V+ L+VN T ++ ++V FD+ F  IPC LLS+DA D  G+PQ++  H++ + +L +AG      E+  +GNT++     EAE         A          D+   G    +    C +CYGAGS G+CC+TC D++ AY+R GWR     +  C  EA         +A       +  GC+L G+L+    + G+FH AP  +LH+ A         NA  F  +D +    + FN +HTIN L FGD  P G  SP        L+G  + VQDTH M+QY++++VPT Y+ L +   + SNQY+ TEH+ H+  G  RGLPGVYF+Y++SP+QAL EEKR G L F+T  C ++GG ++++ L++  +G  L+
Sbjct:   15 LKKIDAFPKAFDDFRVKTTTGALVSIISIIIMATLFFSEMSYFLKTETVDHLYVNGTRTNKLHVDFDISFHDIPCNLLSVDAMDDTGVPQKDAVHEIYKHKLSVAGEKQGFPERQELGNTVR----TEAELEDLVKSQSA----------DLVKQGAILKEQIGACGNCYGAGSPGQCCQTCLDVKQAYQRVGWRFKPHGIIQCTSEAF--------MANMNEQFAEDGGCQLYGSLDLNRGS-GHFHIAPHKKLHQPAGDASGRPGQNAGLFNLMDLISFTFDQFNVSHTINTLSFGDNFP-GIKSP--------LDGETRGVQDTHGMYQYYIKVVPTRYKALYSTTEIQSNQYAVTEHMSHLAPGSGRGLPGVYFHYEVSPIQALFEEKRGGMLGFITSCCAIVGGAFSVMGLVDVFLGAVLK 408
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A836C905_9STRA (Endoplasmic reticulum vesicle transporter-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C905_9STRA)

HSP 1 Score: 257 bits (657), Expect = 3.750e-73
Identity = 161/420 (38.33%), Postives = 220/420 (52.38%), Query Frame = 3 
Query:  237 FVHLKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISST---VNVTFDVVFGRIPCTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEAIANEAEKHSAQAEARAGESRENRRDSDVFSHGG-GDGKSEDVCSCYGAGSEGECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGA--DRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRA------NAMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMN 1460
                KRLD Y  PK+EF++ T HGA  + +       L  REL +SM       L V+S         NVTFD+ F RI C  +S+ AED  G PQ N++H VT+ RLD  G  LD   +H +G+T+K+  A    +  A A     +S +     D  + GG GD        CYGAG  GECC TC++++  YR+ GW      VP C    + GA   +PE      A     EGC L+G L+      GN HFAP  +            A   L R   A   FNTTHTI+ L FG+  P G   P        L G  + ++D++ M+QY++++VPT Y+  +G +V +NQYS TEHL+HV  G  RGLPGVY YY++S + A +EE R G L FLT  C ++GG+Y +L L++
Sbjct:   20 MARAKRLDFYGAPKAEFRKGTVHGALMSAVAFLLACVLIARELQYSMAVRTTTNLEVDSRFDPAGRRTNVTFDIKFPRIACDHISISAEDNNGAPQHNVQHHVTKIRLDSQGYMLDAGSRHEVGDTIKDETALLGREGEAAARKSLADSAK-----DAPAQGGCGD--------CYGAGEPGECCDTCDEVKDKYRKMGWSFSPDEVPQCRPGFVPGAVAAKPE------AAAPPREGCYLSGYLDLSK-ARGNVHFAPSSKAGAAVAGGAGDTAGAMLLRTFAA---FNTTHTIDKLRFGENAP-GMVYP--------LEGESRVIRDSYGMYQYYIKVVPTTYKPLSGPSVTTNQYSVTEHLKHVEPGSGRGLPGVYLYYELSTITASIEELRPGLLKFLTSVCAIVGGLYTVLGLID 407
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7S0GAV9_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAV9_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.250e-71
Identity = 152/436 (34.86%), Postives = 230/436 (52.75%), Query Frame = 3 
Query:  192 DGDGSSAGNGARGVSFVHLKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQE---NLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEAIANEAEK-----HSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVCSCYGAGSEGECCRTCNDIRAAYRRKGWRI-DIASVPLCAGEALGGADRPEDLAIYKAPGVD--SEGCRLAGTLEARLWTEGNFHFAPGHRLHRRAN--AMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMN 1460
            +G GSS  +G  G     LKR+D +S    +F   T  GA  +V+ V A+    + E +F+    + + + +N+T  + + V FDV   +IPC LLS+DA D  G PQ    +  H V + RLD  GRP     +   GNT+ + + +E E      H    E     +RE  RDS+V           +   CYGAG +GECC TC+DI+ AYRR GW++ DI  +P+C                ++A  VD  +EGC + G + A     GN H AP   + +       +F+D +    ESFN +HT+N LHFG+  P    S         L+G  + ++D + M+QY++ +VPT+Y+  +G    +NQ+  TEH+RHV+ G  RGLPGV+F+Y+ SP+  + EE RRG+  F TG C  +GGV+ ++ + +
Sbjct:    2 NGIGSSKSSG--GGLADRLKRMDAHSSVSDDFLIRTAQGAILSVLTVLAITYFTYAEYIFNFAHTVKDTVHINATAPAGLQVEFDVTLPKIPCALLSIDAADPSGQPQSLHIDTHHRVWKHRLDENGRPKGKRSRFEFGNTMTKDVDHEKEVMDKYGHLVIEEEDVDAARE-MRDSEV-----------ECGPCYGAGEDGECCNTCDDIKRAYRRAGWQVKDIEKMPVC---------------YHQAASVDEENEGCNVHGIV-ALSTGGGNLHLAPNREMEKFGTHKQFSFIDMLLNTFESFNVSHTVNMLHFGEEIPGNSGSQ--------LDGQVRNIKDAYGMYQYYITIVPTMYKFLDGRVTETNQFHVTEHMRHVNPGSGRGLPGVFFFYEFSPLHVVFEESRRGWTHFFTGVCAAVGGVFTVMGIFD 399
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7S1FY63_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY63_9STRA)

HSP 1 Score: 248 bits (634), Expect = 4.540e-70
Identity = 152/417 (36.45%), Postives = 225/417 (53.96%), Query Frame = 3 
Query:  246 LKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISST-VNVTFDVVFGRIPCTLLSLDAEDALGIPQE---NLRHDVTRTRLDLAGRPLDGS--EKHGMGNTLKEAIANEAEKHSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVCS-CYGAGSEGECCRTCNDIRAAYRRKGWRI-DIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRANA----MTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMN 1460
            LKR D ++    EF+  T  GA+ +++ V + L     EL ++ +T +V++++VNST S+T V + FDVVF  I C LL +DA DA+G  Q    +  H V + RLD  GRP+  S  EK G+G T    + ++ +     AE RA    +     D F          D C  CY AG  GECC TC+D++ AYR+KGW + +  S+  C                 KA     EGCR+ G ++      GN H APG  +    +     ++  D + +A E +N THTI  LHFG   P   ++    V    L+G  +TV++ H M+QY+LQ+VPT Y   +G T+ +NQ S TEH+R V  G  RG+PGV+F+Y++SP   + EE RRG++ F T  C ++GGVY +L +++
Sbjct:   10 LKRYDAHTAVSDEFRARTTQGASLSILAVLSALYFLTTELRYNFETTVVDRVYVNSTSSATAVQMEFDVVFPEIACGLLGVDANDAVGNSQGLHIDRTHHVYKHRLDNHGRPIHRSKPEKVGLGGT----VTSDRKLEEVHAEKRAQGDDDGSEIDDYFE--------SDFCGDCYSAGEPGECCNTCDDVKRAYRKKGWTLPNQKSISQCKN-------------TIKAKDEVDEGCRMTGNVQLSS-AGGNLHIAPGRDVSDIGSGGDSFISITDLLGLAFEKYNVTHTIQKLHFGPRLPEKMSN----VEQQQLDGQVRTVKNVHGMYQYYLQIVPTRYVKLDGTTITTNQMSVTEHMRIVKPGSGRGMPGVFFFYEVSPFHVIFEENRRGWIRFFTSVCAIVGGVYTVLGMID 396
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7R9U337_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U337_9STRA)

HSP 1 Score: 240 bits (612), Expect = 3.960e-67
Identity = 145/421 (34.44%), Postives = 223/421 (52.97%), Query Frame = 3 
Query:  237 FVHLKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEAIANEAEKHSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVCSCYGAGSEGECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRANAMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGL--TVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRR-GFLAFLTGACGVIGGVYNILSLMNTGIGGFLRRR 1490
            +  L+R D + +   +F+  T +G   +++ +  +L L+  EL ++M+ ++V++LFVNST    + + FD+ F +I C+L+ +D  D +G PQ+ ++  V +  L  +G  + G   H    TL+       E     AE + G+             G G+    +   CYGAG EG+CC TC+D+R AY+R+GW  D AS   C  E        + L + K+     +GCRL G +E      GNFHFAP  RL  +++     + ++   + FN +HTI+ L FG   P G   P        L+ H K + D + M+QYF+++VPT YR  N     + SNQYS TEHLRHV  G  RGLPGV+F+Y ISP+ A+ EE+RR G+  F T    + GG++  L  +N  +    +RR
Sbjct:   12 WAQLRRFDAHPKALEDFRVHTRYGGVVSLVAIALMLLLSASELRYTMQRDLVDRLFVNSTRKQELAINFDITFPKIHCSLIGVDVNDQIGNPQDGVKKSVNKRSLSSSGEVI-GEVLHEDTKTLEHESEFAGEGGDGDAELQDGK-------------GAGEKAQSNCGDCYGAGEEGQCCNTCDDVRLAYQRRGWSFDPASAVQCKSEEF------QMLELQKS----GQGCRLKGEVEVTS-VAGNFHFAPAERL--KSSHRNQAEALKFTFQQFNVSHTIHKLSFGREFP-GIRDP--------LDDHSKVITDGYGMYQYFVKVVPTTYRYLNDEHEPIVSNQYSVTEHLRHVTPGSDRGLPGVFFFYDISPIHAIFEERRRRGWSQFFTSIFAICGGLFVCLGFVNDLLHSATKRR 396
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: W7TMC0_9STRA (Endoplasmic reticulum-golgi intermediate compartment protein 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMC0_9STRA)

HSP 1 Score: 240 bits (612), Expect = 8.830e-67
Identity = 145/417 (34.77%), Postives = 230/417 (55.16%), Query Frame = 3 
Query:  237 FVHLKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEA--IANEAEKHSAQAEA------RAGESRENRRDSDVFSHGGGDGKSEDVCSCYGAGSEGECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRANAMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYR-LGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMN 1460
            +  L+RLD + + K +F+  T +G A +V+ +  ++ L + EL +SM+ EIV+ ++VNS+  + +   F++ F  + C+LLS DA D LG  QE +   V +TRLD  G P+     H +G+T  E   +    E   AQ E       + GE  + ++  +     G + K      CYGAG  G+CC TC +++ AY  KGW     +V  C         + E+L +    G + EGC + G+L       GN HFAPG +L R++ A+   D V      FN +H I++L  G+  P G  SP        L+   ++V D + M+QY+L++VPT+Y+ L    TV SNQY+ +EH+RH++ G +RGLPGV+F+Y  SPV    +E+R+G L FLT  C ++GGV+++  +++
Sbjct:   14 YERLRRLDYHPKTKDDFKVRTAYGGATSVVALACMIFLFFTELKYSMEKEIVDHMYVNSSRDTRLLFNFNLTFPSVSCSLLSADALDPLGNKQEGVESHVFKTRLDSMGNPIAAKTWHKLGDTFTEEDLLLKHEEDSRAQLEXXXXXXEKLGEEGDGQQVGEDGKPRGRNLKRRKCGDCYGAGEPGQCCNTCAEVKQAYDSKGWAFIGLNVEQC---------KQENLQVSFGDGAE-EGCNIHGSL-LLTHDSGNVHFAPGEQL-RQSGALNVADLVTFTFLQFNVSHEIHHLSLGEEFP-GFRSP--------LSNQKRSVADGYGMYQYYLKVVPTIYKHLSQPPTV-SNQYAVSEHIRHINPGSNRGLPGVWFFYDTSPVHVEFQERRKGLLPFLTSVCAIVGGVFSVFGVVD 408
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7S4IKK9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IKK9_9STRA)

HSP 1 Score: 238 bits (608), Expect = 3.470e-66
Identity = 148/453 (32.67%), Postives = 230/453 (50.77%), Query Frame = 3 
Query:  195 GDGSSAGNGARGVSFVHLKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQE---NLRHDVTRTRLDLAGRPLDGSEKHGMGNTL----------KEAIANEAEKHSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVCS-CYGAGSEGECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHR------RANAMTFLDR-VQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMNTGIGGFLRRR 1490
            G G ++ + + G     L+ LD ++   +EF+  T  GA  +V  + ++  L   E  F   TE+++++ VN+T  + + + FD+ F  +PC LL++DA+D  G  Q    +  H V + R++  G+ +    K  +G T           KE +  E EK   +  A                    D   ED C  CYGAG EGECC TC+D++ AY+R+ W ID+A V  C  +              K+   + EGC + GT+ A     GN H APG  L +       A+ +T L   ++ A E+FN +HT+N + FG   P              L+G  + V+D + M+QY++Q+VPTVYR  +G  + +NQYS TEH+RHV  G  RGLPGV+ +Y++S +   +EE RRG++ FLT  C  +GGV+ ++ + +  I  F R R
Sbjct:   18 GAGPASASSSSGGFAERLRSLDAHTPAAAEFRVRTIQGALLSVFTLLSIAYLVRIEYGFHFLTEVLDRVHVNATTPAGLEMEFDITFHSVPCALLNVDAQDPTGQSQSLHLDRTHRVFKHRINKNGKMIGRKSKFELGGTFADERSLRDMGKEELGLEDEKEEVEGTA-------------------SDSSDEDECGDCYGAGEEGECCNTCDDVKRAYQRRSWHIDLAKVKQCRKDV-------------KSADEEGEGCNVHGTV-ALSTGGGNLHLAPGRGLEKFGKEKQDADFVTSLTEFIEEAFETFNVSHTVNRIRFGQEYPGDLHQ---------LDGQKRIVEDDYGMYQYYVQVVPTVYRKLDGTEIATNQYSVTEHMRHVTPGSGRGLPGVFIFYEVSALHVEMEEYRRGWIRFLTSVCAAVGGVFTVMGMADRAI--FARSR 426
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7S2W0R9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0R9_9STRA)

HSP 1 Score: 236 bits (602), Expect = 7.090e-66
Identity = 152/423 (35.93%), Postives = 217/423 (51.30%), Query Frame = 3 
Query:  246 LKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIPCTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEAIANEAEKHSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVC-SCYGAGSEGE-CCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHR--RANAMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLT--VHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMNTGIG-GFLRRRG 1493
            L+ LD + +   EF+  T HGA A+V+ + A+L L   E  +  + E+V++L VNS+ + T+ V FD+ F  IPC LLSLDA D  G  QE L H+V + +LD  G   D  E+H    TL+                                H   D   +  C +CYGA  + + CC TC ++R AY  KGW      +  C    +  +  PE            EGC + G +E    + GNFHFAPG  L    R+  M+F D + +  +SFN +H I  L FG+  P G  +P        L+   ++V D   M+QY++++VPT Y+  N     + SNQYS TEHLRHV  G  RGLPGV+F+Y++SPVQA  EE R+G L F+   C ++GGV+ I+ L +  +G  F + RG
Sbjct:   12 LRSLDAFPKHGEEFRVRTTHGAMASVVAIVAMLYLFVSEFYYYSRVEVVDRLVVNSSHADTLKVRFDIKFHHIPCDLLSLDAMDTSGQRQEELVHNVFKRKLDAEGNKADRPERHRELGTLQ------------------------------HEHQLSDPGEKPACGNCYGARDDPDACCNTCEEVRIAYEDKGWAFHPDEIEQCQPAKVLSSIDPET----------EEGCNIFGNVELTKLS-GNFHFAPGEHLQAAARSGQMSFSDLMSLTYKSFNISHDIRTLAFGNHFP-GIQNP--------LDRQSRSVSDGSGMYQYYVKVVPTTYKFLNRRRKDLVSNQYSVTEHLRHVTPGSGRGLPGVWFFYEVSPVQATFEETRQGTLEFIASVCAILGGVFTIIGLADRVVGVAFEKLRG 384
[Close]
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Match: A0A7S1BW07_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BW07_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.380e-64
Identity = 146/419 (34.84%), Postives = 218/419 (52.03%), Query Frame = 3 
Query:  246 LKRLDIYSRPKSEFQRATPHGAAATVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISST-VNVTFDVVFGRIPCTLLSLDAEDALGIPQE---NLRHDVTRTRLDLAGRPLDGS--EKHGMGNTLKEAIANEAEKHSAQAEARAGESRENRR--DSDVFSHGGGDGKSEDVCS-CYGAGSEGECCRTCNDIRAAYRRKGWRI-DIASVPLCAGEALGGADRPEDLAIYKAPGVDSEGCRLAGTLEARLWTEGNFHFAPGHRLHR----RANAMTFLDRVQVALESFNTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQLVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQALVEEKRRGFLAFLTGACGVIGGVYNILSLMN 1460
            LKR D +++   EF+  T  GA+ +++ + + L     E+ ++ +T ++++++VNST S+T V + FDV F +IPC LL +DA D +G  Q    +  H V + RL   G  +  +  EK  +G T+      E E H           RENR     D + +   D    D C  CYGAG  GECC TC D++  YR K WR+ D   V  CA E              KA     EGCR+ G ++      GN H APG          +   +  D + +A E +N THTIN LHFG   P         +    L+G  + ++D H M+QY++Q++PT + L +G  + +NQ S TEH+R V  G  RG+PGV+F+Y++SP   + EEKRRG+  F T  C ++GGVY +L +++
Sbjct:   10 LKRYDAHTQVSDEFRARTTQGASLSILALLSGLYFLKTEMRYNFETTVIDRVYVNSTPSATAVQMEFDVTFPKIPCGLLGVDANDLVGNSQGLHIDRTHHVYKHRLSARGGHIHRARPEKVDLGGTVTSDKKLE-ETH-----------RENRGLGSDDDYVYDVDDYFDADFCGDCYGAGEPGECCNTCEDVKRVYRAKSWRLPDPEKVSQCAHEV-------------KAKDEVGEGCRIEGNVQLSS-AGGNLHIAPGRDATNIGSGSSRTFSISDLLGLAFEKYNVTHTINKLHFGPRLPNEMGD----IVQRQLDGESRAIKDMHGMYQYYIQIIPTRFVLLSGTAIETNQMSVTEHMRVVKPGSGRGMPGVFFFYEVSPFHVIFEEKRRGYFRFFTSICAIVGGVYTVLGMID 398
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig84.14877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL32_ECTSI5.100e-19266.09Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3H281_9STRA4.320e-7536.15Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A836C905_9STRA3.750e-7338.33Endoplasmic reticulum vesicle transporter-domain-c... [more]
A0A7S0GAV9_9STRA3.250e-7134.86Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S1FY63_9STRA4.540e-7036.45Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9U337_9STRA3.960e-6734.44Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TMC0_9STRA8.830e-6734.77Endoplasmic reticulum-golgi intermediate compartme... [more]
A0A7S4IKK9_9STRA3.470e-6632.67Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2W0R9_9STRA7.090e-6635.93Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1BW07_9STRA1.380e-6434.84Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig84contigP-fluviatile_contig84:251501..261719 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score566.6
Seed ortholog evalue1e-158
Seed eggNOG ortholog2880.D7FL32
Preferred nameERGIC3
KEGG rclassRC00002,RC00078
KEGG koko:K00889,ko:K20365,ko:K20367
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05231,map00562,map01100,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05231
KEGG ModuleM00130
GOsGO:0000139,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005793,GO:0005794,GO:0005798,GO:0006810,GO:0006886,GO:0006888,GO:0008104,GO:0008150,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016192,GO:0030134,GO:0030135,GO:0030173,GO:0030176,GO:0031090,GO:0031224,GO:0031227,GO:0031228,GO:0031300,GO:0031301,GO:0031410,GO:0031982,GO:0031984,GO:0033036,GO:0034613,GO:0042175,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0097708,GO:0098588,GO:0098791,GO:0098827
EggNOG free text desc.vesicle-mediated transport
EggNOG OGsCOG0445@1,KOG2667@2759
EC2.7.1.68
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEndoplasmic reticulum vesicle transporter, C-terminal
Ec32 orthologEc-05_006830.1
Exons10
Model size2893
Cds size1356
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig84.14877.1prot_P-fluviatile_contig84.14877.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig84 251668..260349 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817290.5815966-UTR-P-fluviatile_contig84:251500..2516671622817290.5815966-UTR-P-fluviatile_contig84:251500..251667Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 251501..251667 +
1693571959.5305943-UTR-P-fluviatile_contig84:251500..2516671693571959.5305943-UTR-P-fluviatile_contig84:251500..251667Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 251501..251667 +
1622817290.7204425-UTR-P-fluviatile_contig84:260349..2617191622817290.7204425-UTR-P-fluviatile_contig84:260349..261719Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 260350..261719 +
1693571959.6255498-UTR-P-fluviatile_contig84:260349..2617191693571959.6255498-UTR-P-fluviatile_contig84:260349..261719Porterinema fluviatile SAG_2381UTRP-fluviatile_contig84 260350..261719 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817290.5921607-CDS-P-fluviatile_contig84:251667..2517711622817290.5921607-CDS-P-fluviatile_contig84:251667..251771Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 251668..251771 +
1693571959.5414653-CDS-P-fluviatile_contig84:251667..2517711693571959.5414653-CDS-P-fluviatile_contig84:251667..251771Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 251668..251771 +
1622817290.602791-CDS-P-fluviatile_contig84:252687..2528551622817290.602791-CDS-P-fluviatile_contig84:252687..252855Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 252688..252855 +
1693571959.5494487-CDS-P-fluviatile_contig84:252687..2528551693571959.5494487-CDS-P-fluviatile_contig84:252687..252855Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 252688..252855 +
1622817290.614371-CDS-P-fluviatile_contig84:253579..2537131622817290.614371-CDS-P-fluviatile_contig84:253579..253713Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 253580..253713 +
1693571959.5573106-CDS-P-fluviatile_contig84:253579..2537131693571959.5573106-CDS-P-fluviatile_contig84:253579..253713Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 253580..253713 +
1622817290.6251774-CDS-P-fluviatile_contig84:253973..2541091622817290.6251774-CDS-P-fluviatile_contig84:253973..254109Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 253974..254109 +
1693571959.5650773-CDS-P-fluviatile_contig84:253973..2541091693571959.5650773-CDS-P-fluviatile_contig84:253973..254109Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 253974..254109 +
1622817290.6355438-CDS-P-fluviatile_contig84:254603..2547451622817290.6355438-CDS-P-fluviatile_contig84:254603..254745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 254604..254745 +
1693571959.5728483-CDS-P-fluviatile_contig84:254603..2547451693571959.5728483-CDS-P-fluviatile_contig84:254603..254745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 254604..254745 +
1622817290.6460037-CDS-P-fluviatile_contig84:255462..2555781622817290.6460037-CDS-P-fluviatile_contig84:255462..255578Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 255463..255578 +
1693571959.5806513-CDS-P-fluviatile_contig84:255462..2555781693571959.5806513-CDS-P-fluviatile_contig84:255462..255578Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 255463..255578 +
1622817290.6611547-CDS-P-fluviatile_contig84:256139..2562211622817290.6611547-CDS-P-fluviatile_contig84:256139..256221Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 256140..256221 +
1693571959.5911598-CDS-P-fluviatile_contig84:256139..2562211693571959.5911598-CDS-P-fluviatile_contig84:256139..256221Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 256140..256221 +
1622817290.6744435-CDS-P-fluviatile_contig84:257349..2575051622817290.6744435-CDS-P-fluviatile_contig84:257349..257505Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 257350..257505 +
1693571959.6016335-CDS-P-fluviatile_contig84:257349..2575051693571959.6016335-CDS-P-fluviatile_contig84:257349..257505Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 257350..257505 +
1622817290.6882796-CDS-P-fluviatile_contig84:258242..2583451622817290.6882796-CDS-P-fluviatile_contig84:258242..258345Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 258243..258345 +
1693571959.6097412-CDS-P-fluviatile_contig84:258242..2583451693571959.6097412-CDS-P-fluviatile_contig84:258242..258345Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 258243..258345 +
1622817290.7081032-CDS-P-fluviatile_contig84:260134..2603491622817290.7081032-CDS-P-fluviatile_contig84:260134..260349Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 260135..260349 +
1693571959.6177654-CDS-P-fluviatile_contig84:260134..2603491693571959.6177654-CDS-P-fluviatile_contig84:260134..260349Porterinema fluviatile SAG_2381CDSP-fluviatile_contig84 260135..260349 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig84.14877.1

>prot_P-fluviatile_contig84.14877.1 ID=prot_P-fluviatile_contig84.14877.1|Name=mRNA_P-fluviatile_contig84.14877.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=452bp
MKRRVAGTDGDGSSAGNGARGVSFVHLKRLDIYSRPKSEFQRATPHGAAA
TVILVGAVLALAWRELVFSMKTEIVEKLFVNSTISSTVNVTFDVVFGRIP
CTLLSLDAEDALGIPQENLRHDVTRTRLDLAGRPLDGSEKHGMGNTLKEA
IANEAEKHSAQAEARAGESRENRRDSDVFSHGGGDGKSEDVCSCYGAGSE
GECCRTCNDIRAAYRRKGWRIDIASVPLCAGEALGGADRPEDLAIYKAPG
VDSEGCRLAGTLEARLWTEGNFHFAPGHRLHRRANAMTFLDRVQVALESF
NTTHTINNLHFGDLPPAGHASPKHVVASMLLNGHHKTVQDTHAMHQYFLQ
LVPTVYRLGNGLTVHSNQYSATEHLRHVHSGPSRGLPGVYFYYQISPVQA
LVEEKRRGFLAFLTGACGVIGGVYNILSLMNTGIGGFLRRRGGRGTRHRS
M*
back to top

mRNA from alignment at P-fluviatile_contig84:251501..261719+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig84.14877.1 ID=mRNA_P-fluviatile_contig84.14877.1|Name=mRNA_P-fluviatile_contig84.14877.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10219bp|location=Sequence derived from alignment at P-fluviatile_contig84:251501..261719+ (Porterinema fluviatile SAG_2381)
TTGGGAATAGAAGGAAGATAAAAGGCAGCGGGTTGAGCTCCACATATAGC
TTTCACTTAGCAGGAAAACATCGTCGGGAGCGTGTGAAGGCAAGCAAGCG
CGGGCACCGTGGATCTGCCAGAGGAAAGACGAACGCCCGTCGAGCTACGC
GGGTTGCCGACAGCGGCATGAAGCGGCGGGTGGCTGGCACTGATGGCGAT
GGAAGCAGTGCGGGAAATGGTGCAAGAGGAGTTTCCTTCGTCCACTTGAA
GCGACTCGACATTTACTCGAGGTGCGCCGGGATTGTCGGTAATCCTTCGC
GGAGCAACCCAATCCACTGCTGCTGTTAAGTAAGAACAAACACCCAACAT
TTCCATCCACACACGAGCTACCCCCGCTGCGAGGATTCCGTCATTTCGTG
TCGTGTCCATTCATTGTTCTGTATAAATGGTCATTTCTTGCAATGGGGTG
CATGCTCAATGTGAAGGGCTTTCGTTTCCCCTGTAGTGGCGCAAGCCGGC
CCTAGTGGCACAGTCCGTCTCCGGTTACAGCAATATCTGCGGTGAGGTAG
GATGCCAGTACGCACGAATGTGGAATCCGGCACGAAGAATTTCCGACGCC
AACAAAACTGCTTGTGAAGTAGAGGTATCCGCGCCCTAGCTGCGCTCTTG
CCTGGGCCGAACATGGCAGTCATCGCACACCAGGTTGCCCAAGTACAATG
TGCGTGCCCATACAATCAAATCGCCTACTCCTGCGGGGCACCCTTCGGTT
TAGAGGTGAGAAGAGAACAAGGTCCCCGGGAGAATACTGAACATGTCGAA
TGCGGATTGACCTGTGGCTACGGCTTCTTCGATCTTGCAATTCTTTTCGT
TTCTGTCCCCCTGGCCCACAGCTTGTACTTTTCAAATACTCTGTGGCCAG
GCTGTCCCCAACACTGTTCTTCCTCACTGTTCTGCTGTTCCAGTTTCCCC
CAGAGGACCTCAAAGGAACGTACCGTGTCGCGTGCACCCACTGCCGCGGC
TCCGCACACATGAATAAGATTTTGCTTGTGCTTTACAGTACCTCATGCAC
CCCCTTCCTCCCTCAGCCCAAAGGACGAGTTTTGACTCCTCACCGGGCCG
CTGCGGAGGTCGTGTTCGTCGGTGCAATCCACCGCGGGGGTCCTGCACAC
ACGCGTACGTTTGCAACGCCCCACCCCCATGCCGCAGACCAAAGAGCGAG
TTTCAGCGGGCGACGCCTCATGGGGCCGCTGCGACTGTCATACTCGTCGG
GGCGGTTCTCGCTCTCGCCTGGCGAGAGCTCGTCTTCTCGATGAAGACCG
AGATCGTCGAGAAGCTGTTCGTCAACTCCACCATCAGCTCTACCGTCAAC
GTCACGTGAGAAATGTATACACAATATATATAGAGAGAACCTGTTGCCGA
TGTCGACGGTGTGATCGCGAGAGGGGGGGGGGTCTGGGAAAGATTTGGCA
TGGTTGGTAGCTGCCGGCGGTGGGACAGCGTGGCTCCGGCGGGGAGGCGA
GGGGTGGGCGAGAAGGGGAACAGGGCGTAGGCGGCGGTATTGGGGGGGCA
AGGCGGGGAGGGGTGCTGTTCGGCAGCTTCTGCGCTGGCGGGCCGCAGTT
GCGGTGCCGTCCTCTGGTAGCGAAGTAAAACATGGGTGAAGGAGAGCCTG
CTCGTCGGCCTACATAGTGCTGGTGCTGGTGCTGGTGCTGGTGCTGGTGC
TGGTGCTGGTGCTGGGCTGGTGCTGGCGCTGGCGCTGGCATTAGCGCTGG
TTTTGAGCAGGCCTGGCGTAGTAGAGGTTAGGTACGAGGTGGGTATTTTA
CTGCATCAGCATACGTATTATCCGCTGTGCACCCTGGTCTATCCACCTTT
AAATCCCTCGAAAGCCAACGAGCTTTTGCATGTACTCTTGCTGCTACAGG
GACGCAACTCATCGGGTGCTTCTACGCGACATGTAAATAACTGAAGCGAC
GTATTCTTTTCGGAGAAGAAGCAATTATTCTTATAATGCACATTATTCTG
TGTTACAAATATTATCTTTTGACTCGGCGGACAGACGATGATGACTCCCC
TGAATAGGCGCTTGTGTCAATTAAATCAGGTTTGATGTGGTATTTGGGCG
GATCCCATGCACACTTTTGTCGCTGGACGCGGAAGATGCGTTAGGAATTC
CCCAGGAAAACTTACGGCACGACGTCACCAGGACCAGGCTAGACTTGGCT
GGTCGCCCGCTTGGTGAGATGTTGTTCTCGTCGTTGCAGAAATAAGGCGC
AGCACGTCACTTCATTTTCATTGCCGATCGTTTTGTGTTGGCTGAAAGTA
TCTTCCTTTCTGTGCGGATGCTCACGAAATTTCGTGTCCCCTGGACCAGG
ATAGACTCGGCGGCTCCCCCGCTGGGCTGCAAGGAACGTTGAATGTTGCT
GTTGGAGTCGCAGTTCATGTTGTTTTCGATGAAAACCATCTCGGTACGCT
TCTCGAAACCTACTCGTCGCCAGACGGCTCGGAGAAGCACGGGATGGGGA
ATACGCTGAAGGAGGCGATCGCGAACGAGGCGGAAAAGCATTCTGCACAG
GCGGAGGCCCGCGCCGGGGAGAGCCGAGAAAACAGGCGAGACAGCGATGT
ATTCAGTCAGTAAGTGTGAACGAGTGTCATCCAAAGAGCTGATTGACTGT
CGGTCATGAGAAGTGAATTTCGGCCACAGAAATGTGGTCGATTAACGGCG
AAGGAAGATAGGCGAGACAGCAATTGTATTGGCTCTAAACTATGTGAAAA
AAAGGAAGGTCATGCCATGTCGGCAAAAATAACTGGATCTGCTTGCCGCC
GAAGTGAAGCACGTTTGAATGTCGGCCGGAGAGCGGTGGTGGTCGGTATG
AAATACTCCGAAGTAGGTCACTTAATGTTTTGCGGAGAGAAAAGCGCGAT
CGATTATTGGACGCAGGAAGGCGATCGATTTGAGGGCGATTAGAGGTGAT
TCTCTGCAAATGAAAGGTGGTTGTGTAGATAAGGCATTTGGTCTATGCAT
GGCGGAAGGTACGTTGTCATCGGCAATAGAAAGATGATTGTCCACCTCAC
GTATGAACCCTACCCTTGTCCCACGTTTGCCCTTTGTTCGCTTGTCACAT
CAGCGGCGGTGGCGATGGCAAATCGGAGGATGTCTGCAGCTGCTACGGCG
CAGGGTCGGAAGGGGAGTGCTGCCGGACTTGCAATGACATCAGGGCGGCC
TATCGCCGCAAGGGATGGAGGATCGACATCGCCTCCGTGCCTCTTGTGAG
TTGTTTTCATCAATTTTGCCCCGAAACGCTGTACCACACATTTTCGTCCC
CAGCTTCATTTTTTGGAGTCTGCTTATCTATTAAAGTATCATGCCGGCCG
TGCGATTCAGTCGCAGTGCGTTTTTTTCTTTCTTGATTCGTCGTCGATTG
ATTTTGAACGCCGACGCTTCTCCCTTGTCGCATTTTTCTTCACAATAAAG
CGCCCCTAGGTGCAACGCCGTGCCGCAAACGACACTTGGCATGCTGTGTG
AGACAGCCACCTCGCACTGCCCTGGCCCTTACCCTACCGCTGATCCCAAC
ACTCTCCTACCCGCTTCCCCTTCCCCTTATCCTGCCTTTGTCCTGAGCCC
TAGCCCTTCTCCTTCACCTCGATCTGACCCTTGCTCTAAACCACATCCTA
ACCCTAAGTCTTGCCCTTTCCCTACCATCACCGCCAACCCCCCTCCGTTC
CCTTCGTCTTCTCCTTCGGCTTCCTCTATCTCAATCCCTATCATCAACCT
CGACCATGTCCCTTGCCCCAAACCGTTCGCTTCCGTTAAGCTTGACCCAG
AGCATCATCGGGCACACGGTCCGGCTCACTTGGACGTCCAAATGACGCCC
GCCTTTTCACCCCCGACTCGCTGTTTGTGTCCATCGATTCTCAAACCCGG
CCTCTTTTCCTGAGCCCTGACGCTGATTCATTGCTTGTGTGCATTCCCCC
GAACTTCATTAGTGCGCCGGCGAAGCGCTTGGCGGGGCGGACCGCCCTGA
GGACTTGGCCATCTACAAGGCGCCGGGGGTAGACTCCGAGGGGTGCCGGC
TAGCGGGGACCCTCGAGGCGCGTTTATGGTTTAGTCGGAGTCAAGTGAAC
ACTCTTGCATGGATAAGGAGAAAATACGCCGGGCGGGTGTACGCGGTGGT
CGCGCTAGACGACCTGTCGCTACATGGTTTGTGGTTCTTCATTCTTGGTT
GCTGTTCTTTCTCGCGTATGCCCCCTTCCAGAAATTCCCGCCCAGTGGCC
ACAAGAGATGGGGCACACCCACTCGGAAAGTGCATCTTGTGCTGGCTTTC
TTGAGACCGGCGCAAGTTCTCTCTGCGTGACTGCCGCAAACTGCATGCCA
ACGCTGGGGTAATAGTACCGGTGGAGTGTCGGGTTTTTCGTAGCTGAGGC
CCAGTCTCATCCCAAATTCTGCCGTGTCGAAAACCAAGCAACAGGGATGC
GTAACTCTCGAGTTCCGCTGTTGATACGAGGAAAGTAACGAGGTTTGGCG
CTAATGTTCGAAGATGGGATGAACATCGGTATCGGCATAAATGTTCTCAC
AAATTGAGACCTCTGAATATTAGCATGACGGAAGGACTTGATTTATGTCC
TTTCCTTGTTTTCCCCCCGTTGGCTTTTCAGGTCACCAGGACGGAGGGTA
ACTTCCATTTTGCCCCGGGGCATCGATTGCATCGGCGCGCCAACGCCATG
ACGTTTCTAGACAGGGTTCAGGTCAGGCTTGTTCGTGGCAGTGCAAGGAG
GCACGGTGGGGAAGCGAATCCTGGGCGCGCAGCTCCCCCCCCCTCCAGCC
CTCCGGTCCATCAACCACGGAATTGTGATTGGAATGCTCCGTCCTACATT
CAAAGCCGACGGCGAGGGATGGCAACCACATGCCCCCATGCTCGGCTTGA
GAATTTTGCGCACCCCTTGTCTCCCGCTCAATACCTCCATTTCTGACCCT
CCCCTCGATTGAAAGGTTACAGCGGAACTTTCCCTGTTCAGTTCCACTCA
AAGGAAACGGTGAAGGGGCTTCGTCCGGGATGATAGATCATACCCCCCTT
CTAGCGGGAATGGCGGGGGTGGCAACCATAAGTCGACTGATATAATGGAG
TTGTGCTTGCCCAAGCCTACTGCCCCCGCTGACGGTTGCGGTCGCGGCAC
CGCCGAAGTAGCGTCCTCCTTCGTCTCTGAGAGGCGGTGTGAAGTATGAG
CGAAAGAGGTGACTGGGCTTTCTAGCTGCAGGGGCTGGTCCTGGTCCACG
AGATGTGTTGTCACCCTGCGACACGTTTGTCGCATCCCCGGTCTCTTTCT
CTCTGTCTCTCTCTCTCTGCCTCTCGCGCTGTCGCTTTCTCTCTCTCTCT
CTCGCTGTCTCGCTGTCTCTCCTCTCTCTCTGCCTCCCTGCCTCTCTGCC
TCTCTGTCTCTCTGCCTCTCTGTCTCTCTGTCTCTCTCGCTGTGTGTGTG
TCGGTGTCTCTCTCTGTCTCTCTCTGTCTGTCTCTGTCTGTCTCTGAGTC
GCTGTCTCGCTGTCTCGCTGCCTCTCTCTGTCTCTTTGGCTCTCTCTGTC
TCGCTGCGCTCTCTGCGCTCTGTCTGCCTCTCTCTGTCTCTGTCTCTGTC
TCGCTGTCTCTCTGTCGCTCTGTCTCTCTTTCTCTCTTCCACTCTCTCTC
CCTCTCTCTCTCTCCCTCTCTCTCTTTCGCTCTTTCaCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCACTCTC
GCTCTTTCGTTCTCTCTGTCTCCTTCTCTTTCTTTCATTGTCTCTCTCCC
CCGCCCCCTGTCTCCCCCCTTTCACTTTCCCTCGCTGTTTCCCTCGCAGG
TCGCGTTGGAGTCGTTCAACACCACCCACACCATCAATAATCTTCATTTC
GGAGACCTCCCTCCGGCCGGGCACGCCTCCCCGAAGCACGTTGTCGCCTC
GATGTTGCTCAATGGCCACCACAAGACGGTTCAGGACACGCACGCCATGC
ACCAGGTAAAGTGGGTGCTCGAAGGATCGGTTAAGCGAGTCACGCTGCGC
TGATAATCGTGGATAGTGTTGCAAAGGCCAGGGCAGTGGAACTAGCACGA
ACAGTAGTTGCAGCACTTACGCCGTAGTTGACGACAGTCATCATTGTTGA
TACAGGTAATTTGTCGTCGTTGTCGCGTTTCGTTGTCGTTGCTCCTCTTC
AGTGGTGCCGGTGCAGCCGCTGATTTTGAGGACTGGTGCTGATGCTGGCC
CGTGAAATTGTTTTTCGAACCCGAAAATGTGAAGTGCTTGTGGACGTTGC
AGGTCAGCGCGTGCTTACTTTGCCCTCCTCTTTTTGACGGATATTTCGAC
CGACGAGGGAAGGAGGCGGCCATTTGGGCAAATGTGTCCTGAGGGGACGT
CCTGGCCATTTCCCCTGGGGAGGGCGTTGAGATCCTAACCGATGGGCTGC
TCGGCAATCACTTTCCACGGATTACCAACATGCGTCCTCCTCGCGACCAC
CTGCTGTTATTTTGATGAATGCCGCCCCACTGTCGCAACAAATAGTGTCC
GAATCGTCTTTCTCGTTCAACCAGCAGTTAAGCGTTGTTCGTATTTTTTG
TGCTGTTGTAGTTGTTAAAGGTCAAGAGCACTTTTCTCTCGTCCTGTTTC
TCTCACTGTCGCACGTTTATGCTCACGTGACCGCCCCATTATCTTCGCTG
CCTTTCTTTGCCAACCGCAACGGGGTCGAATAACGCAAGCAGTACTTCTT
GCAGCTGGTGCCGACGGTATACCGCCTTGGCAACGGGTTGACGGTTCATA
GCAATCAGTACTCCGCGACAGAGCACCTCAGGCATGTTCATTCAGGCGAG
TGCTTTCTGAGGTCAAATTCGAGGAAGTATTGACGGACCGGATGCCATGG
GGGTAAAGCGTAAGGCAGATTTCATGGGTAGTGTGCCCGTCTTAACGGGT
TGAAGACGCGCAGCATCCCAAAGACTACAAAGCTTTTTAACCATGTTGTT
CAGGCAAGCGCTCAATGTGGGACCTGACGGAGATAACGATCGGTTATGGG
ATATTTGGCGGTGACGTAAAGGGTGCTCGTTTCGGCCCCCTTCAACTCGG
TTCTGAGTAAAAGTTGGCGGTATGCTTTCTTTGTCCACAACACCAAATTT
GCGCAGGGCGCACGGCCCCAAATTCCACGAGACTTTATTAGTGCAATCCC
TCCGCGATCAACAGGGTGCAAAATTCAACGTTTAAAAAGCCGAAGGCTTA
AACTAAAATCTCATTAAGTTCATTTGTGCATGAACGTTCGTGACAGTAGA
GTAATCGGGCGCTGAAATCCGAAAAACTGCCATGTACGATCACTCACGTC
AAAACCCAGAGAAAGCTGAGGACGAGGCTTGAGTACAACAGGCACGCGTT
CAGGAATCAGTGCAAACTTAACCAGCAGGGTTGTGTGCAAGCTGTTCTTT
GTTCGTGCGTGTTGGCGCATGACTTCAAGTTAACGCGCTAGCTCTCTCGA
ATGGGCCGTCTCTGCACAGAAGTATGGACTCATCGATTGCTTGAGTGAGG
AGACCGCGCACGCCCGTGGTGGTTTCGTCATTTGCTACGATTATTCCCGT
GGCATTGGTCGATGCTGAGGTTCACATGTCCTCGTCAACTCTTTAAAGAC
TCAGTAGATCAGTATCTCCATCGCGTACCCCAACTCTTGGGGCGCCCGTA
AATCTTGATGTATTCGGGTTGTGTTCGAACGTTGGAACTACTGATCCAGA
TATCGGAACTGGCTTTAACCCCCCCCCCACATCAATATCTCCCCGTTCCC
GCTGGCTCTCACCTCGGTGTTTGCAATCGGGATTGGGTTTTCGTCGCTTG
GCAACGACGTTGTAAAACAAGCCATTTCACTTCGTGAACTCGGCAACCAG
GTTACCGTCTTTTTTTTCCCTCTGTTTTTTTTGGCGGTAACCATAATGGT
GGTCGAGAAGATCATGTTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAG
GGGGATGATCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCA
GTTACACAGTGCTTACAACTGTCTCTGGAAGTGAAAGCACCAGAAAATAA
ATTAACCCATACGCAGCTGTCATCCGAATGCAAGGAAGTAAGCACAAGAT
GCCGAACACCCTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAA
TACCTCACGGCGCTTCGCGCTTGGTGGTGTGAGAGCCTGGTCCGGTGAGA
ACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTA
ACGACTACGGCATGCACGACTATGAGTACACCCCCCCCCCACATCAATAT
CTGAAACCACCAGAATATCGTGAACGCCTATCGGCATGACGCCCTATCTC
CCAGCGTGTAGGCCGTTTCCGAGACCTAGCAGCAGGTGTGCGCTTCGATA
CTAGTGTCGACCTGTGCAGCGAGTCAATGGGATCAACATAAGCTGTCCGC
CAAAATGCCATACCTCGCGCGATATGTCCGTCCCGAGGCTCTCCGGGTGT
GCCACTTCAGTATTCACTTACGTAACGCGTGCGTACATGAAATCAAATAA
ATATCCTTGCACCTTTTCTTCTCCCCCATGGCAGGCCCTTCCCGAGGCCT
TCCCGGGGTGTACTTCTACTACCAGATCTCGCCGGTGCAGGCGCTGGTCG
AGGAGAAGAGGAGGGGGTTCCTCGCTTTCCTAACTGGCGCTTGCGGCGTG
ATCGGCGGAGTGTACAACATCCTTAGCCTGATGAACACAGGGATCGGTGG
CTTTCTGCGCCGTCGCGGCGGCCGCGGGACGAGGCATCGGTCGATGTAGA
AAGTACACCATGGGGACTGGAGGGAGAGGAGGGGACGGTGGGGGGTCCTA
GGATGAATCTCGAGAGTCAGCATCTCCCGTCATTTATCAGAAGATGGGGA
AAGTCTTGGAAAGGCCTCGTTTCCTCTCCATGCCCCGACGACGATATTTG
GGAGTATTTGCAGGGTGACTGTTGGCAAGGACACCCAGCCAGCAGCAACG
TCGACGTCCTCCCCTCTTACTTTGTTCGAATGAAGAATTGGGAGTCATGA
CGCGTGGTCGTGCGGCAGAGAAACGACAAGGATGAAATTGCTGGCGACGG
TGAAATGCATTTATTTCTCAAGCCGACCACACGTGCCCCGTTCTTGAACG
TCCAGTTCGCCCGCGCCGCCTCGAAGATCACCCGTATCCGTACTCCGATC
GAACGTCGGCGAACATTGCGTCTTATGCTGACTCGACAGAGGATATTGTG
CAGTGTCGAGTCAGAGGATATTGTGCAGGTTTGGAAAGTCACGAGGCTCG
AAACAGTCACTCGCTACCCGATGACTTGTTGCCAAACACGGCCGGCCGGA
AAAAATAGCGTTTCAGTGTTACACAGGAGGTAGATATGAAAGTGGAGTGG
TGGTGGGCGATGCATTGATCCTCGAAGGAGCGCACACCACTCATAATTCC
GTCCTACAAAACCACCAACACGTGATTTGCGAGATTTTTTGAGAGATATG
GGTGGGGGAGTGTTGACGTGTCTCACCCATCGTGACGACTTCGTGTCGGT
TCAGCATTGGATACATGATTAGTATGGGAGTTGCGCGCACTTTGTTCCGA
GTATTTTGTGCGAGATGTGAGCTGGTTCTCTCTCTCTCTCCCTCTCCCTC
CCTCTCTCTCCCTGTCCATGTCGCGTCTTTATTGTGTGAGACGAACCGAT
AATTATGCAGCGCGGGGGGTTGAGTAGGGTGAGTCCTCTTCAGAAATCCA
CTCTTAATTCCAGGTACAAGATGAGACACCCGTACCCCGGTAGAATCAGG
GGTCCGGGTTGATGATCTTGACTTTTCCTGTTTTGTTTATTGCATTGTTT
TCTACCTCACATAGCTTGTAGGAGTGAGAGTGAAGGACTCCAAACTACGA
GTCTATGGCCGAACTGCATCGCATTGCGGGTTCCCCGGGTCCACTTTATT
TTACTTTTTTAGATACTTTCATTCCAGGCAAACCGTCCAGTGACCACGGG
AATCGGCCGTTCTGAATTTGATCAGGACGGTCAAAAGGAGGTTCTGGGCG
GAGAGATGGGATGGTTTTTGAATTCTAAGACAACAACAATAGTAAACGAT
GCCTGGTACTTAATTAGCAGCTTTTAAGTCCAAAATGAGTACTGTGATTG
AGTGCCCAGAATGGTTGAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig84:251501..261719+

>mRNA_P-fluviatile_contig84.14877.1 ID=mRNA_P-fluviatile_contig84.14877.1|Name=mRNA_P-fluviatile_contig84.14877.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2712bp|location=Sequence derived from alignment at P-fluviatile_contig84:251501..261719+ (Porterinema fluviatile SAG_2381)
ATGAAGCGGCGGGTGGCTGGCACTGATGGCGATGGAAGCAGTGCGGGAAA
TGGTGCAAGAGGAGTTTCCTTCGTCCACTTGAAGCGACTCGACATTTACT
CGAGATGAAGCGGCGGGTGGCTGGCACTGATGGCGATGGAAGCAGTGCGG
GAAATGGTGCAAGAGGAGTTTCCTTCGTCCACTTGAAGCGACTCGACATT
TACTCGAGACCAAAGAGCGAGTTTCAGCGGGCGACGCCTCATGGGGCCGC
TGCGACTGTCATACTCGTCGGGGCGGTTCTCGCTCTCGCCTGGCGAGAGC
TCGTCTTCTCGATGAAGACCGAGATCGTCGAGAAGCTGTTCGTCAACTCC
ACCATCAGCTCTACCGTCAACGTCACACCAAAGAGCGAGTTTCAGCGGGC
GACGCCTCATGGGGCCGCTGCGACTGTCATACTCGTCGGGGCGGTTCTCG
CTCTCGCCTGGCGAGAGCTCGTCTTCTCGATGAAGACCGAGATCGTCGAG
AAGCTGTTCGTCAACTCCACCATCAGCTCTACCGTCAACGTCACGTTTGA
TGTGGTATTTGGGCGGATCCCATGCACACTTTTGTCGCTGGACGCGGAAG
ATGCGTTAGGAATTCCCCAGGAAAACTTACGGCACGACGTCACCAGGACC
AGGCTAGACTTGGCTGGTCGCCCGCTTGGTTTGATGTGGTATTTGGGCGG
ATCCCATGCACACTTTTGTCGCTGGACGCGGAAGATGCGTTAGGAATTCC
CCAGGAAAACTTACGGCACGACGTCACCAGGACCAGGCTAGACTTGGCTG
GTCGCCCGCTTGACGGCTCGGAGAAGCACGGGATGGGGAATACGCTGAAG
GAGGCGATCGCGAACGAGGCGGAAAAGCATTCTGCACAGGCGGAGGCCCG
CGCCGGGGAGAGCCGAGAAAACAGGCGAGACAGCGATGTATTCAGTCAAC
GGCTCGGAGAAGCACGGGATGGGGAATACGCTGAAGGAGGCGATCGCGAA
CGAGGCGGAAAAGCATTCTGCACAGGCGGAGGCCCGCGCCGGGGAGAGCC
GAGAAAACAGGCGAGACAGCGATGTATTCAGTCACGGCGGTGGCGATGGC
AAATCGGAGGATGTCTGCAGCTGCTACGGCGCAGGGTCGGAAGGGGAGTG
CTGCCGGACTTGCAATGACATCAGGGCGGCCTATCGCCGCAAGGGATGGA
GGATCGACATCGCCTCCGTGCCTCTTCGGCGGTGGCGATGGCAAATCGGA
GGATGTCTGCAGCTGCTACGGCGCAGGGTCGGAAGGGGAGTGCTGCCGGA
CTTGCAATGACATCAGGGCGGCCTATCGCCGCAAGGGATGGAGGATCGAC
ATCGCCTCCGTGCCTCTTTGCGCCGGCGAAGCGCTTGGCGGGGCGGACCG
CCCTGAGGACTTGGCCATCTACAAGGCGCCGGGGGTAGACTCCGAGGGGT
GCCGGCTAGCGGGGACCCTCGAGGCGCGTTTATGTGCGCCGGCGAAGCGC
TTGGCGGGGCGGACCGCCCTGAGGACTTGGCCATCTACAAGGCGCCGGGG
GTAGACTCCGAGGGGTGCCGGCTAGCGGGGACCCTCGAGGCGCGTTTATG
GACGGAGGGTAACTTCCATTTTGCCCCGGGGCATCGATTGCATCGGCGCG
CCAACGCCATGACGTTTCTAGACAGGGTTCAGGACGGAGGGTAACTTCCA
TTTTGCCCCGGGGCATCGATTGCATCGGCGCGCCAACGCCATGACGTTTC
TAGACAGGGTTCAGGTCGCGTTGGAGTCGTTCAACACCACCCACACCATC
AATAATCTTCATTTCGGAGACCTCCCTCCGGCCGGGCACGCCTCCCCGAA
GCACGTTGTCGCCTCGATGTTGCTCAATGGCCACCACAAGACGGTTCAGG
ACACGCACGCCATGCACCAGGTCGCGTTGGAGTCGTTCAACACCACCCAC
ACCATCAATAATCTTCATTTCGGAGACCTCCCTCCGGCCGGGCACGCCTC
CCCGAAGCACGTTGTCGCCTCGATGTTGCTCAATGGCCACCACAAGACGG
TTCAGGACACGCACGCCATGCACCAGTACTTCTTGCAGCTGGTGCCGACG
GTATACCGCCTTGGCAACGGGTTGACGGTTCATAGCAATCAGTACTCCGC
GACAGAGCACCTCAGGCATGTTCATTCAGTACTTCTTGCAGCTGGTGCCG
ACGGTATACCGCCTTGGCAACGGGTTGACGGTTCATAGCAATCAGTACTC
CGCGACAGAGCACCTCAGGCATGTTCATTCAGGCCCTTCCCGAGGCCTTC
CCGGGGTGTACTTCTACTACCAGATCTCGCCGGTGCAGGCGCTGGTCGAG
GAGAAGAGGAGGGGGTTCCTCGCTTTCCTAACTGGCGCTTGCGGCGTGAT
CGGCGGAGTGTACAACATCCTTAGCCTGATGAACACAGGGATCGGTGGCT
TTCTGCGCCGTCGCGGCGGCCGCGGGACGAGGCATCGGTCGATGTAGGCC
CTTCCCGAGGCCTTCCCGGGGTGTACTTCTACTACCAGATCTCGCCGGTG
CAGGCGCTGGTCGAGGAGAAGAGGAGGGGGTTCCTCGCTTTCCTAACTGG
CGCTTGCGGCGTGATCGGCGGAGTGTACAACATCCTTAGCCTGATGAACA
CAGGGATCGGTGGCTTTCTGCGCCGTCGCGGCGGCCGCGGGACGAGGCAT
CGGTCGATGTAG
back to top