mRNA_P-fluviatile_contig83.14847.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: D7G7G7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G7_ECTSI) HSP 1 Score: 422 bits (1086), Expect = 8.930e-133 Identity = 211/311 (67.85%), Postives = 245/311 (78.78%), Query Frame = 1
Query: 4 GTTLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSKNGKVCLQHHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTI---TLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNATLRHQWDVYAHAMDLYKHRCLQILR-EDLRLCEV-APPSLYTLSDQERHDLYQEVVP 921
GTTLLFMHLWKCAGSSLRHLLRDWAEAK QDIGIVVRC DV SK GK+CL+HH+LI+ Q P+IR ++AGHFTWGFQ+HVRQPYVMFTTLRNPLE+FVSGQQYLNRK SRHF AVS+VE T+ AI +LR V+VP GNTKSVGF+ RL+DP+ N T+ + TL A EAK +LDTFWLVGVIEQY+GF+AVLQAMMDP+ SE+ +W YAVG YN SPQGA KVL AIDP LVQ+FN TL HQW+VY++A+DLYKHRC Q+L DL +CEV PS YTL++ ER LYQE+ P
Sbjct: 53 GTTLLFMHLWKCAGSSLRHLLRDWAEAKEQDIGIVVRCTDVVSKTGKICLKHHSLINERFQAPFIRLHQVVAGHFTWGFQNHVRQPYVMFTTLRNPLELFVSGQQYLNRKASRHFAHAVSLVEDTILRAIKQHQLRGDVMVPEGMGNTKSVGFIYRLVDPV--QANSTQEGLVGGKTLSAGAQEAKDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCHQMLHTRDLDMCEVPVAPSQYTLTELERESLYQEMHP 361
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: A0A6H5KGA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGA9_9PHAE) HSP 1 Score: 282 bits (721), Expect = 8.340e-80 Identity = 158/308 (51.30%), Postives = 187/308 (60.71%), Query Frame = 1
Query: 4 GTTLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSKNGKVCLQHHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNATLRHQWDVYAHAMDLYKHRCLQILR-EDLRLCEV-APPSLYTLSDQERHDLYQEVVP 921
GTTLLFMHLWKCAGSSLRHLLRDWAEAK Q IGIVVRC DV SK GK+CL+ H+LI+ Q P+IR ++AGHFTWG L P E +++ + E+ F + VS E G G T S G A EA +LDTFWLVGVIEQY+GF+AVLQAMMDP+ SE+ +W YAVG YN SPQGA KVL AIDP LVQ+FN TL HQW+VY++A+DLYKHRC Q+L DL +CEV PS YTL++ ER LYQE+ P
Sbjct: 171 GTTLLFMHLWKCAGSSLRHLLRDWAEAKGQYIGIVVRCTDVVSKTGKICLKRHSLINERFQAPFIRLHQVVAGHFTWG--------------LHRPKEC---SEKWYSDMETTAFDQVVSTAEPE----------------GGVGGKTLSAG--------------------------AQEAMDNLDTFWLVGVIEQYQGFMAVLQAMMDPNKSERDMWKRYAVGKYNTSPQGAGKVLAAIDPALVQEFNETLSHQWEVYSYAVDLYKHRCRQMLHTRDLDMCEVPVAPSQYTLTELERESLYQEIHP 419
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: A0A6H5JGJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ5_9PHAE) HSP 1 Score: 215 bits (547), Expect = 1.270e-58 Identity = 114/292 (39.04%), Postives = 178/292 (60.96%), Query Frame = 1
Query: 7 TTLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSKNGKVCLQHHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAF----ELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNATLRHQWDVYAHAMDLYKHRCLQIL--REDLRLCEVAPP 864
+T++F+H++KCAGS+LR +L WAEA+++ IV RC + S+ ++CL H L+D VQ + + +LAGHF WGFQ H+R+PY+M T LRNPLE++VS QQY ++++++ KA + V M+ + + L + G K + GF+ RL+ N+ + L++A +A +L+TFWLVG++EQY GF+ VL+ ++DP +W Y+ +N SP + VL A+DPQLV++FN +L QW VY A+ L+ RC ++L + LC VA P
Sbjct: 39 STVMFLHVFKCAGSTLRRMLVAWAEAEDELGAIVHRC-NYTSEAREICLAHFKLVDEPVQLELLSRQKVLAGHFLWGFQRHLRRPYLMVTALRNPLEVYVSAQQYTHKRKTKTLEKAQAFVSKAMRKTLRQYGDGPALGEEEMPFGGKSPQQIGGFVFRLV-----GINKKQLYGEKLEVAVTKAIENLETFWLVGLVEQYAGFVEVLELLLDPERKHVDVWQTYSTRQFNTSPLRSRDVLAALDPQLVREFNGSLALQWRVYEKAVALWDLRCREVLPVAKHEELCTVALP 324
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: A0A6H5JAP0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAP0_9PHAE) HSP 1 Score: 205 bits (521), Expect = 8.030e-55 Identity = 119/312 (38.14%), Postives = 167/312 (53.53%), Query Frame = 1
Query: 10 TLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSKNGKVCLQHHALIDPAVQGPYIRKMHILAGHFTWG-------------------FQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLW-DDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNATLRHQWDVYAHAMDLYKHRCLQILRE--DLRLCEVA-PPSLYT 876
TL+F+H+WKC G++LR L+ DWA ++ V C + K KVCL ++ LI P QG +I + +LAGHF WG FQ + +P+ + TTLRNPLE+FVSG+QYLNR + KAV +VE M+ ++ T+ G+L RL+ + E T+ E +L TFWLVGV+EQY GF+AVL+A++DP LW N SP + VL ++DPQLV+ FN+TL +QW +Y HA+ L++ RC ++L E C V PP YT
Sbjct: 62 TLMFLHVWKCGGTTLRRLMCDWANSEGLPCATVAGCGHLSLKERKVCLLNYKLIFPEQQGEFIARQKVLAGHFRWGESRVTSACHTVTRTLFASGFQVYAAEPHWLVTTLRNPLELFVSGEQYLNRATTATLSKAVQVVERAMRKSLET--------------PTQPPGYLHRLVGRSVVTNAEIREATV-------EGARNLKTFWLVGVVEQYGGFVAVLRALLDPDGLHDDLWRPQLEEHKLNASPVQSSNVLASLDPQLVKQFNSTLSYQWLMYGHAVRLFRARCQEVLPEYQHWEFCSVQQPPVEYT 352
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: A0A6H5JGQ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGQ3_9PHAE) HSP 1 Score: 205 bits (522), Expect = 8.350e-54 Identity = 120/302 (39.74%), Postives = 170/302 (56.29%), Query Frame = 1
Query: 7 TTLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSKNGKVCLQHHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRK-----ESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEK---------GNTKSVGFLARLIDPILPAENETETKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNATLRHQWDVYAHAMDLYKHRCLQILREDLR--LCEVAPP 864
+T++F+H++KCAGS+LR + DWA+A+ IV C +V K G +CL H LI +VQ + K ILAGHF WGFQ V +P++M T+LRNPLE FVSG+Q+L+ E A + V M A+ + V + GE+ G +S L I ++ EN + + L AA EA +L+ FW+VGV+EQY G AVL+ ++DP LWD Y+ N+SP + VL AIDP LV+ FN +L QW VY A++L+ RC ++L + +C VAPP
Sbjct: 152 STVMFLHVFKCAGSTLRQMFVDWAKAEGASGAIVTSCDEV-QKEGVICLAKHELIKESVQMKMLLKQKILAGHFIWGFQRLVEKPFLMVTSLRNPLEAFVSGRQFLHPDMTETLEQASAAHAQAFVSYAMLNALG-IDGPGHVAMLGERASLGHALLRGRRQSPDQLGGFIFRLVGQENAKKLHGLALSRAADEAMKNLEAFWVVGVVEQYAGLQAVLKRLLDPDLKHPALWDKYSYRHSNRSPVDSRYVLAAIDPSLVRQFNDSLALQWKVYEKAVELWGTRCREVLPITVHDAMCTVAPP 451
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: A0A6H5KCZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCZ6_9PHAE) HSP 1 Score: 179 bits (455), Expect = 1.090e-45 Identity = 107/293 (36.52%), Postives = 168/293 (57.34%), Query Frame = 1
Query: 1 TGTTLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPD-VYSKNGKVCLQ-HHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAA--EAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIY-NQSPQGAEKVLGAIDPQLVQDFNAT-LRHQWDVYAHAMDLYKHRCLQIL--REDLRLCEV 855
+ +T+LF+H++KCAG++LR +L WA+ + + IV C ++ G++CL + L+DP + + +LAGHF W F+ +V PY+M TTLRNPLE+FVS QQ++++ E++ +V+ V +MK+ + + + F+ R +D + + +M+A A HL+TF++VGV+EQY+GF+ VL+ +DP S +LW AVG+ N SP + VL IDP LV++FNAT L QW VY A+ L+ RC +IL + LC V
Sbjct: 100 SNSTILFLHVFKCAGTTLREVLTTWAKLEGLNGAIVEYCRSKTFTNVGRICLNSQNDLMDPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSMKSRLGW-------------ADPTDLAFIRRFLDSETANSYDPQVLYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAA-AVGVLDNGSPVHSGDVLSGIDPDLVREFNATALARQWQVYDVALKLWDSRCREILPPEDHEALCSV 378
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: D8LHE4_ECTSI (Similar to heparin sulfate O-sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE4_ECTSI) HSP 1 Score: 164 bits (416), Expect = 9.410e-42 Identity = 104/281 (37.01%), Postives = 159/281 (56.58%), Query Frame = 1
Query: 37 CAGSSLRHLLRDWAEAKNQDIGIVVRCPD-VYSKNGKVCLQ-HHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAA--EAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIY-NQSPQGAEKVLGAIDPQLVQDFNAT-LRHQWDVYAHAMDLYKHRCLQIL--REDLRLCEV 855
CAG++LR +L WA+ + + IV C ++ G++CL + L++P + + +LAGHF W F+ +V PY+M TTLRNPLE+FVS QQ++++ E++ +V+ V +M RSR+ + + + F+ R +D + + +M+A A HL+TF++VGV+EQY+GF+ VL+ +DP S +LW AVG+ N SP + VL IDP LV++FNAT L QW VY A+ L+ RC +IL E LC V
Sbjct: 2 CAGTTLREVLTTWAKLEGWNGAIVEYCRSKTFTNAGRICLNSQNDLMNPIREKWLVAGSKLLAGHFLWDFRHYVTPPYLMVTTLRNPLELFVSSQQFMHKAETKTLDDSVAFVGQSM---------RSRL----KWADPTDLAFIRRFLDSKTANSYDPQVMYSDEEMSAMVQTAVDHLNTFYVVGVVEQYQGFIEVLKRTLDPDESHPKLWAA-AVGVKDNGSPVHSGDVLSGIDPDLVREFNATTLGRQWQVYDVALKLWDRRCREILPAEEHEALCSV 268
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: A0A6H5KPF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF0_9PHAE) HSP 1 Score: 149 bits (375), Expect = 3.870e-35 Identity = 100/295 (33.90%), Postives = 149/295 (50.51%), Query Frame = 1
Query: 7 TTLLFMHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSK-------NGKVCLQH--HALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNAT-LRHQWDVYAHAMDLYKHRCLQIL--REDLRLCEV 855
+T LF+H++KCAG+SLR + +A+ ++ C + +C++H H D + + +LAGHF W F+ PY+M TTLRNPLE+FVS Q+ +R E+R A V S M+T + L + +T +VG+ R + NET A E+ HL+TF +VGV+EQYEGF+ VL+ +DP +W A N+SP + VL +DP LV+ +N T L QW VY A+ L+ RC ++L + R C+V
Sbjct: 90 STTLFLHVFKCAGTSLREVFMAFAKTNGWTGAVIAGCSKTQKEFQFHDPPGSVICVRHEDHRPKDENIGRWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTILGLEGLGQLGFIRVFLNDTGAVGYNPRGVY----THNETWAM-------ATESVEHLNTFLVVGVVEQYEGFIEVLKHTLDPGLENPSVWTTGANVQNNKSPVPSRDVLRNMDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPPSDHERYCDV 373
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: D8LIP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP4_ECTSI) HSP 1 Score: 139 bits (349), Expect = 4.880e-32 Identity = 87/245 (35.51%), Postives = 129/245 (52.65%), Query Frame = 1
Query: 145 VCLQ-HHALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKG--NTKSVGFLARLIDPILPAENETE---TKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNATLRHQWDVYAHAMDLYKHRCLQIL--REDLRLCEV 855
+CL +AL D A Q + +LAGHF W + +V P+++ T LR+PLE+FVS +Q+ +R+E+ A V S M+ G G + +GF+ R + + + TK + MA+ A+ HL FW+VGV+EQY GF+ VLQ +DP +LW+ + N SP + VL IDP LV++FNATL QW VY A+ L+ RC ++L ++ LC V
Sbjct: 111 ICLNDQNALRDSASQRWEVAGTRVLAGHFLWDLRQYVTPPHLLITMLRDPLELFVSAKQFKHREETASLEAAADFVASNMR---------------GRLGWEDPSDIGFVRRFLGTDAANSYDPQLVYTKEQSSAMASTAAE-HLSNFWVVGVVEQYAGFVNVLQHTLDPELEHPRLWEAASEVNNNGSPVHSRDVLDRIDPDLVREFNATLSFQWQVYDVALQLWDSRCREVLPLQDHSSLCSV 339
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Match: D7FJ87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ87_ECTSI) HSP 1 Score: 132 bits (331), Expect = 2.010e-30 Identity = 91/242 (37.60%), Postives = 127/242 (52.48%), Query Frame = 1
Query: 145 VCLQH--HALIDPAVQGPYIRKMHILAGHFTWGFQDHVRQPYVMFTTLRNPLEMFVSGQQYLNRKESRHFPKAVSMVESTMKTAISAFELRSRVVVPGEKGNTKSVGFLARLIDPILPAENETETKTITLDMAAAEAKSHLDTFWLVGVIEQYEGFLAVLQAMMDPHHSEKQLWDDYAVGIYNQSPQGAEKVLGAIDPQLVQDFNAT-LRHQWDVYAHAMDLYKHRCLQIL-REDL-RLCEV 855
+C++H H D + + +LAGHF W F+ PY+M TTLRNPLE+FVS Q+ +R E+R A V S M+T + L + +T +VG+ R + NET AAE+ HL+TF +VGV+EQYEGF+ VL+ +DP +W A N+SP + VL IDP LV+ +N T L QW VY A+ L+ RC ++L R D R C+V
Sbjct: 34 ICVRHEDHRPKDDNIGKWLVSGTKVLAGHFFWDFRLMAAPPYLMVTTLRNPLELFVSALQFKHRDETRTLAGATRFVTSQMRTILGLEGLGQLGFIRVFLNDTGAVGYNPRGVY----THNETWAM-------AAESVEHLNTFLVVGVVEQYEGFVEVLKHTLDPGLENPSVWTTGAKVQNNKSPVSSRDVLRNIDPYLVRLYNETRLDLQWKVYEVALQLWDSRCREVLPRSDHERYCDV 264 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig83.14847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig83.14847.1 >prot_P-fluviatile_contig83.14847.1 ID=prot_P-fluviatile_contig83.14847.1|Name=mRNA_P-fluviatile_contig83.14847.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=336bp MHLWKCAGSSLRHLLRDWAEAKNQDIGIVVRCPDVYSKNGKVCLQHHALIback to top mRNA from alignment at P-fluviatile_contig83:189144..198572+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig83.14847.1 ID=mRNA_P-fluviatile_contig83.14847.1|Name=mRNA_P-fluviatile_contig83.14847.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9429bp|location=Sequence derived from alignment at P-fluviatile_contig83:189144..198572+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig83:189144..198572+ >mRNA_P-fluviatile_contig83.14847.1 ID=mRNA_P-fluviatile_contig83.14847.1|Name=mRNA_P-fluviatile_contig83.14847.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2016bp|location=Sequence derived from alignment at P-fluviatile_contig83:189144..198572+ (Porterinema fluviatile SAG_2381)back to top |