mRNA_P-fluviatile_contig83.14845.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig83.14845.1
Unique NamemRNA_P-fluviatile_contig83.14845.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: D7G7G8_ECTSI (Similar to vacuolar protein sorting 24 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7G8_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 1.370e-80
Identity = 146/166 (87.95%), Postives = 160/166 (96.39%), Query Frame = 1 
Query:    1 VRAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLLEGAVDAPTAVPEAA 498
            VRA+ERQI++LERAEKKV+KDIK MAKEGTRN+KAIRLLAKELV SRNAKNRM EGKAQLHSVQMQLQNQ+ALIKVTGVIKKSTEIMASIG LVKIPE+QENMF+LATEMERAGLVEE+V+DGL+LTDAEGLDAQADAEVDKVI E+T+G+LEGAVDAPTAVPE A
Sbjct:   26 VRALERQIVSLERAEKKVQKDIKTMAKEGTRNEKAIRLLAKELVMSRNAKNRMHEGKAQLHSVQMQLQNQIALIKVTGVIKKSTEIMASIGDLVKIPELQENMFQLATEMERAGLVEEVVADGLSLTDAEGLDAQADAEVDKVIAEITEGVLEGAVDAPTAVPEPA 191
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BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A835ZDQ5_9STRA (Vacuolar protein-like protein sorting 24 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDQ5_9STRA)

HSP 1 Score: 155 bits (393), Expect = 8.030e-40
Identity = 86/164 (52.44%), Postives = 119/164 (72.56%), Query Frame = 1 
Query:    1 VRAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLLEGAVDAPTAVPE 492
            +R IERQI +++  E K+ +DIK +AKEG+RN++A+R+LA+++V  R  K RM+EGK Q+HSVQMQL+NQLAL+KVTG + KSTE+M  +G+LV IPE+Q  M  LA EMERAGL EEI+ D +  T     D + D EV+KV+ E+T   + GA +AP   P+
Sbjct:   20 IRTIERQIKSMDNEEAKLVRDIKKLAKEGSRNERAVRVLARQMVTLRQTKTRMYEGKVQIHSVQMQLKNQLALVKVTGCLSKSTEVMQMMGKLVSIPELQATMTDLAREMERAGLTEEILGDAMEDTMGTNED-EVDQEVEKVLAEITATTMAGAEEAPVGEPQ 182
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BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A433PQA2_9FUNG (Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PQA2_9FUNG)

HSP 1 Score: 130 bits (328), Expect = 7.920e-31
Identity = 77/165 (46.67%), Postives = 117/165 (70.91%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLLE--GAVDAPTAVPE 492
            RA+ERQ+  +E  E KV+K +K +AK G +  KA   LAKELV S+  K R++  KAQL+S+ MQL NQL+ +K+ GV++KS+EIM  + Q+V++PE+ + M +++ EM +AG+++E++ D +   D E L+A+AD EV+KV+ ++TDGLL   G V AP  VPE
Sbjct:   33 RALERQLRGIEGEELKVKKSLKALAKRGDK--KACMTLAKELVRSKRHKERLYTSKAQLNSIVMQLNNQLSTLKIAGVLQKSSEIMKLVNQVVRLPEISQAMQEMSMEMMKAGIMDEMIQDTMESLDDEDLEAEADEEVNKVLFQVTDGLLGEVGQVGAPLEVPE 195
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BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A2R5GMG8_9STRA (Charged multivesicular body protein 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMG8_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.250e-30
Identity = 79/164 (48.17%), Postives = 118/164 (71.95%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALT-DAEGLDAQADAEVDKVIVELTDGLLEGAVDAPTAVPE 492
            R ++RQ+  +ER E K+++DIK +AK+G     AIR LA  LV S+ AKNR+   KA ++SV +QL++Q A +++  V++ ST++MA++  LVK+PE+ +NM ++A EMERAGL+EEI+ D +  T D EG+D +ADA VD++I ELT GLL+ A  APT  P+
Sbjct:   38 RMLDRQLRQIEREELKMQRDIKMLAKKGE--MAAIRPLAHSLVQSKKAKNRINVTKAHMNSVNLQLRHQAAQMRMAQVMQSSTKVMAAMNSLVKMPEVAKNMQEMAMEMERAGLIEEIMDDAMESTFDDEGMDGEADAAVDQIIAELTTGLLDKAPAAPTTAPK 199
[Close]
BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A507DEA3_9FUNG (Uncharacterized protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DEA3_9FUNG)

HSP 1 Score: 128 bits (322), Expect = 4.310e-30
Identity = 71/151 (47.02%), Postives = 111/151 (73.51%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLL 456
            R +ER+I +++  E KV++DIK  AK G +   +   LAKE+V +R AK RM+  KAQ++S+ MQLQ Q+A+IKV G I+KS E+M  + +L+K+PEM +NM ++  EM +AG++EE+++D + + D EG+D +++  VDKV++ELTDGLL
Sbjct:   31 RELERRIRSIDSEEAKVKRDIKAAAKRGDKT--SCMTLAKEVVNARKAKERMYTSKAQMNSIIMQLQQQVAMIKVAGNIQKSAELMKLVNKLIKVPEMSKNMQEMQREMMKAGIIEEMMNDAIDMADDEGIDDESEEIVDKVLLELTDGLL 179
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BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A8J2S9J1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S9J1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 4.310e-30
Identity = 70/163 (42.94%), Postives = 111/163 (68.10%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLLEGAVDAPTAVPE 492
            RA++R+I  LE+ E+K   + +   KEG   Q A +++A+E+V +R A+NRM   KAQ++SV MQLQ Q A+++  G +KKSTE+M  + +LVK+PE+Q+ M ++  EMER+GL+EE+V D L   D + ++ + + +V+KV+ EL   L +G  DAP  +PE
Sbjct:   31 RAMDREISKLEQMERKSRDECRKYGKEGR--QDACKIVAREIVRTRAARNRMLMAKAQINSVNMQLQTQAAMVRAAGCMKKSTEVMRCMNKLVKLPELQKTMMEMQREMERSGLIEEVVGDALDELDGDDVEEETELQVNKVVEELAGDLFKGQTDAPETLPE 191
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BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A1Y2EM81_9FUNG (Charged multivesicular body protein 3 (Fragment) n=2 Tax=Neocallimastigaceae TaxID=29007 RepID=A0A1Y2EM81_9FUNG)

HSP 1 Score: 127 bits (319), Expect = 5.760e-30
Identity = 71/151 (47.02%), Postives = 110/151 (72.85%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLL 456
            R I+RQI ++   E K++  +K  AK G +  K    LAKE++ SRNAKN+++E KAQL+S+ M LQ QL+ IK+TG +K++T IM S+ QLVK+PE+ + M + + EM +AG+++E+VSD L + + EG++ +A+ EV+KV+ ELT+GLL
Sbjct:   13 RQIDRQINSITMEENKIKASLKQAAKRGDK--KICISLAKEIINSRNAKNKLYETKAQLNSILMSLQQQLSTIKITGTLKETTGIMHSMNQLVKVPEISKTMQEFSKEMTKAGIIDEMVSDTLEMNEEEGIEEEAEEEVEKVLFELTNGLL 161
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BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A1Y1VJ74_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VJ74_9FUNG)

HSP 1 Score: 126 bits (317), Expect = 8.060e-30
Identity = 69/153 (45.10%), Postives = 109/153 (71.24%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLLEG 462
            R I+RQI ++   E K++  +K  +K G +  K    LAKE++ SRNAKN+++E KAQ++S+ M LQ QL+ IK+TG +K +T IM S+  LVK+PE+ + M + ++EM +AG++EE++SD L + D EG++ +A+ EV+KV+ ELT+G  EG
Sbjct:   13 RQIDRQINSITMEENKIKASLKQASKRGDK--KICTALAKEIIHSRNAKNKLYETKAQINSILMSLQQQLSTIKITGALKDTTAIMQSMNALVKVPEISKTMQEFSSEMTKAGIIEEMISDTLEMNDEEGIEEEAEEEVEKVLFELTNGKKEG 163
[Close]
BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A1Y2CQ12_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CQ12_9FUNG)

HSP 1 Score: 124 bits (310), Expect = 7.910e-29
Identity = 77/164 (46.95%), Postives = 112/164 (68.29%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKA-IRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLL--EGAVDAPTAV 486
            R +++QI  +E AE KV+KDIK  AK   RN  A  RLLAKE+V SR A++R+   KAQL+S+ MQLQ QLA+ KV G +K+ST+IM  +  L+K+PE+   M +++ EM +AG++ E++ D +   D EG++ +AD EV+ ++ +LTDGLL   G V AP  V
Sbjct:   23 RELDKQIRGIETAEAKVKKDIKAAAK---RNDAASCRLLAKEIVRSRKARDRLHTSKAQLNSLSMQLQQQLAVAKVAGSLKQSTDIMKIVNNLIKLPEIHNTMQEMSKEMMKAGIIGEMMEDAIDTLDEEGIEEEADKEVENILFDLTDGLLGQAGQVGAPLEV 183
[Close]
BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Match: A0A0B7NK39_9FUNG (Uncharacterized protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7NK39_9FUNG)

HSP 1 Score: 124 bits (311), Expect = 1.560e-28
Identity = 68/151 (45.03%), Postives = 109/151 (72.19%), Query Frame = 1 
Query:    4 RAIERQILTLERAEKKVEKDIKNMAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALIKVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGLALTDAEGLDAQADAEVDKVIVELTDGLL 456
            R I+R+I +++  E KV+K IK +AK+G  + K  R+LAKELV S+  KNR++  KAQ++S+ MQL +QLA IK+ G I+KS E+M  + QL ++PE+ +NM +++ EM +AG++EE++ D + + D E ++  AD EV+KV+  +TDG+L
Sbjct:   30 RQIDREIRSIDNEESKVKKSIKQIAKKG--DVKNCRMLAKELVRSQKHKNRLYTSKAQMNSITMQLDHQLATIKLAGSIQKSAEVMKMVNQLARLPEISKNMQQMSMEMTKAGIIEEMIGDTMDMMDDEDIEEAADEEVNKVLFTITDGIL 178
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig83.14845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7G8_ECTSI1.370e-8087.95Similar to vacuolar protein sorting 24 homolog n=2... [more]
A0A835ZDQ5_9STRA8.030e-4052.44Vacuolar protein-like protein sorting 24 (Fragment... [more]
A0A433PQA2_9FUNG7.920e-3146.67Vacuolar sorting protein VPS24 n=1 Tax=Endogone sp... [more]
A0A2R5GMG8_9STRA1.250e-3048.17Charged multivesicular body protein 3 n=1 Tax=Hond... [more]
A0A507DEA3_9FUNG4.310e-3047.02Uncharacterized protein n=1 Tax=Synchytrium endobi... [more]
A0A8J2S9J1_9STRA4.310e-3042.94Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1Y2EM81_9FUNG5.760e-3047.02Charged multivesicular body protein 3 (Fragment) n... [more]
A0A1Y1VJ74_9FUNG8.060e-3045.10Uncharacterized protein (Fragment) n=1 Tax=Piromyc... [more]
A0A1Y2CQ12_9FUNG7.910e-2946.95Uncharacterized protein (Fragment) n=1 Tax=Rhizocl... [more]
A0A0B7NK39_9FUNG1.560e-2845.03Uncharacterized protein n=1 Tax=Parasitella parasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig83contigP-fluviatile_contig83:177447..182134 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score240.7
Seed ortholog evalue5e-61
Seed eggNOG ortholog2880.D7G7G8
Preferred nameCHMP3
KEGG koko:K12193
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
GOsGO:0000815,GO:0000920,GO:0002020,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005770,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006900,GO:0006914,GO:0006996,GO:0007032,GO:0007034,GO:0007041,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0008333,GO:0009056,GO:0009057,GO:0009987,GO:0010008,GO:0010256,GO:0010564,GO:0010824,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0019058,GO:0019068,GO:0019538,GO:0019899,GO:0019941,GO:0022411,GO:0022607,GO:0030163,GO:0030496,GO:0031090,GO:0031210,GO:0031410,GO:0031982,GO:0032386,GO:0032465,GO:0032467,GO:0032509,GO:0032510,GO:0032511,GO:0032535,GO:0032879,GO:0032886,GO:0032984,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0034613,GO:0034622,GO:0035091,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040012,GO:0040013,GO:0040017,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0043162,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043328,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0045787,GO:0046605,GO:0046618,GO:0046755,GO:0046907,GO:0046983,GO:0048284,GO:0048518,GO:0048519,GO:0048522,GO:0048524,GO:0048525,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0050997,GO:0051036,GO:0051049,GO:0051128,GO:0051179,GO:0051234,GO:0051258,GO:0051259,GO:0051291,GO:0051301,GO:0051302,GO:0051493,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051726,GO:0051781,GO:0060341,GO:0060627,GO:0061024,GO:0061025,GO:0061763,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070405,GO:0070507,GO:0070676,GO:0070727,GO:0070925,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0090066,GO:0090068,GO:0090174,GO:0097352,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1901981,GO:1902186,GO:1902187,GO:1902188,GO:1902936,GO:1903649,GO:1903900,GO:1903901,GO:1903902,GO:1904669,GO:1990381,GO:2000641
EggNOG free text desc.vacuolar transport
EggNOG OGsCOG5491@1,KOG3229@2759
COG Functional cat.N
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSnf7 family
Ec32 orthologEc-02_000210.1
Exons5
Model size2332
Cds size528
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817285.3589785-UTR-P-fluviatile_contig83:177446..1791781622817285.3589785-UTR-P-fluviatile_contig83:177446..179178Porterinema fluviatile SAG_2381UTRP-fluviatile_contig83 177447..179178 -
1693571943.8187485-UTR-P-fluviatile_contig83:177446..1791781693571943.8187485-UTR-P-fluviatile_contig83:177446..179178Porterinema fluviatile SAG_2381UTRP-fluviatile_contig83 177447..179178 -
1622817285.4321096-UTR-P-fluviatile_contig83:182062..1821341622817285.4321096-UTR-P-fluviatile_contig83:182062..182134Porterinema fluviatile SAG_2381UTRP-fluviatile_contig83 182063..182134 -
1693571944.2849987-UTR-P-fluviatile_contig83:182062..1821341693571944.2849987-UTR-P-fluviatile_contig83:182062..182134Porterinema fluviatile SAG_2381UTRP-fluviatile_contig83 182063..182134 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817285.3697412-CDS-P-fluviatile_contig83:179178..1793941622817285.3697412-CDS-P-fluviatile_contig83:179178..179394Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 179179..179394 -
1693571943.8299246-CDS-P-fluviatile_contig83:179178..1793941693571943.8299246-CDS-P-fluviatile_contig83:179178..179394Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 179179..179394 -
1622817285.3794446-CDS-P-fluviatile_contig83:179826..1799351622817285.3794446-CDS-P-fluviatile_contig83:179826..179935Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 179827..179935 -
1693571943.839156-CDS-P-fluviatile_contig83:179826..1799351693571943.839156-CDS-P-fluviatile_contig83:179826..179935Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 179827..179935 -
1622817285.3893764-CDS-P-fluviatile_contig83:180509..1805701622817285.3893764-CDS-P-fluviatile_contig83:180509..180570Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 180510..180570 -
1693571944.2385275-CDS-P-fluviatile_contig83:180509..1805701693571944.2385275-CDS-P-fluviatile_contig83:180509..180570Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 180510..180570 -
1622817285.4072497-CDS-P-fluviatile_contig83:181141..1812441622817285.4072497-CDS-P-fluviatile_contig83:181141..181244Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 181142..181244 -
1693571944.2586956-CDS-P-fluviatile_contig83:181141..1812441693571944.2586956-CDS-P-fluviatile_contig83:181141..181244Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 181142..181244 -
1622817285.4208415-CDS-P-fluviatile_contig83:182023..1820621622817285.4208415-CDS-P-fluviatile_contig83:182023..182062Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 182024..182062 -
1693571944.2728958-CDS-P-fluviatile_contig83:182023..1820621693571944.2728958-CDS-P-fluviatile_contig83:182023..182062Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 182024..182062 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig83.14845.1prot_P-fluviatile_contig83.14845.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig83 179179..182062 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig83.14845.1

>prot_P-fluviatile_contig83.14845.1 ID=prot_P-fluviatile_contig83.14845.1|Name=mRNA_P-fluviatile_contig83.14845.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=176bp
MAKEGTRNQKAIRLLAKELVASRNAKNRMFEGKAQLHSVQMQLQNQLALI
KVTGVIKKSTEIMASIGQLVKIPEMQENMFKLATEMERAGLVEEIVSDGL
ALTDAEGLDAQADAEVDKVIVELTDGLLEGAVDAPTAVPEAAEATAAPAA
AAAAAIAADEEDEATKAMKARLESL*
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mRNA from alignment at P-fluviatile_contig83:177447..182134-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig83.14845.1 ID=mRNA_P-fluviatile_contig83.14845.1|Name=mRNA_P-fluviatile_contig83.14845.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4688bp|location=Sequence derived from alignment at P-fluviatile_contig83:177447..182134- (Porterinema fluviatile SAG_2381)
GTGCGGGCTATCGAGCGTCAGATCCTGACCCTCGAGCGGGCTGAGAAGAA
GGTTGAGAAGGACATCAAGAACATGGCCAAGGAGGGGACCCGCAATCAAA
AGGCCATTCGAGTAAGTACTTTGCAGCCGCGGCTCCCGTCAAGTGCCCCC
CTTTCTGCGAAATTCGAGTGAGCCTTCCTCGGTCGTTCTCCCGATTTTTA
GCGTTGCATGTTTGGCGGAATGCACTGCATAGCGGTTACCAAATCCCGTG
AAACCGCTGCAACCGGTTTGAGCTAATTCGCTTGCGGGATTAGAGAGAGC
GCGCTGTATTATTGCTCACAAAATCCCCTCCTACACCATATGTTGCGATC
ATAACTGTGGTTTGGACGTCGCTCTCGGATCGTCCCTAGGTCCGTACCGT
GCCTTGGCGGTGGCCATCCGAGTCGGCAGGGAGTGGGGAATAATCCGGGA
GAATTCTCCCGGCTTCGTGGTTTGTTGCCCGTTGAAGCTTGCTAATTCTT
TCGGTCGATACCGAAGGATCCCAGAAAAGACTGTGCGCCGTTTTTTCCAA
ATCGGTCGAGGGTTCTCCATACATGCACATGTTTTTTCTTTTCTGTCCTT
ATTGTGCAACGTGAAAATTGATATGCGAGTGAAGTGGGTGAACGAGAGGA
GTAACCCGCAGTTTTCTGAGGGGACCGTCAGCGGCCGCGAGGGGAAAACG
AACACACGGACCGAAGCCCACAGCATTGTCGCAATCGTGTGACGGCGGGT
ATCTCTCCCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCCGACTCCTCCTTGTGTCTCTCTGCC
GTCTGTCTCTCCTTTTCCCATCGACAACACGGGGGGGCAGCTATTGGCGA
AGGAACTGGTGGCCTCTCGAAACGCCAAGAACCGCATGTTCGAGGGAAAG
GCACAGCTGCACTCTGTGCAGATGCAGCTGCAAAACCAATTAGGTGAGAG
AGACAGAAGAGAGAGACAGAGAGAGAACAGGAGGGACATCGACAGATGAG
CAGAAATTGTGGAATAACCTGACGCTGAGTGAATGAGCGCTGGGTATGCA
GAATCTTATAGATAAGAGGAGGCAAACCCTCCTTTGGCAGAGGGACAGAG
ACTCCGCTTGGGAAGAGCAGAATCACATGAGCAATAGGGGCCGGAAAGAA
CTAGGGTGGGATGGGCTACTCGCGGCCCATATGCGTCTGCCGTGTGTAGA
GAGCGGAAACACTCTTGCTTCCCATGCATCCGAATTATCAAGCATGATTC
TCTTCGCACGAAAGTCGATACGGTGAGTGCTTACCAGGGCGAATTTTCTC
CAAGCTTTTCAAGCTCGAGAGCTTCCCCTGCCGCTTCTGAGGCTGTCTCT
CCCTCCTCCTCGTTCTGCTGCTGCTGCAATTTCTGTTATGGGGCAATTTA
CTGGCGGGTTCACTGGCCGTTTTGTTATTTTATCGTGATATCTTTTTTGA
ATAGTTTCGGCCGATTTCCTCTCCGTTGTTTTGCTTCCTTTTTCGCTTTT
GCTGTACTTCACAGCTTTGATCAAGGTCACCGGCGTGATCAAGAAGAGCA
CGGAGATCATGGCGTCCATTGGGCAGTGAGTGTTGGCCTAGTGGCAGTTT
CTGCATAAAACCACATCCACAGTCCCGTCGCCACAGACGGAGAGCTTAGG
AGTGTATTTTTCTCGCTACCCGTTGTTCCGTCCTCTTGTTTTCGCCTGCA
TCACGCGACAATCACGGTGCATCGTCGTACTCCTTTGTTCACGGCAGTAT
CTTGCCACCTCAGGATTCAGGCTGCAAGAACCCTACACCTTTCGCTCTCT
CTTGTAGTCCCTTCGTCTTTCCCCATCGCTCTCTGTCTCTCTGTCTCTGT
GGCTTTCTCTTTCTCCTTTTCTTTCTCTTTCTCTTTCTGTATGCTCTCCC
TCCCTCTCTTGCTCTCGCTGTCTCTCCATCGTCTCTCTATTGTCTTGTTC
AATCTCCGTAGGGTTTCTATTCACCCATGAATCTTTGCCTTGCATGAAGG
CGGCTGAACTCGACCGAGTTCTCGCTACCGCTAGTACTCGACGGGGTGTT
GCTATTTTTCGTTTTGGCCGTTTGATGTTCAAAACATCGCTGCGGGTGGT
CTCGTTCCCGTGGTTAACTTTTCTACCGAAAAATGCGCCGTGTTTCCAGG
TTGGTAAAGATCCCAGAGATGCAAGAGAACATGTTCAAGCTAGCAACGGA
GATGGAGAGGGCTGGCTTGGTGGAGGAGATCGTGTCCGATGGACTCGCAC
TAACTGATGTGAGATTTGGTTGTCGTCGTCGTCGTTTCGTATGTCGTCGT
CGTCGTCGTCGTCGTCGTCGTCGTCGTTGTCGTGGTTGTTGTTGTCGTTG
TCGTTGCTGTTGCTGCTGTTGCCTGGCGGCGTTGCAAAAAACTCCTTCAG
CATCCTCGGGCAATGGCGCAGCCGCTGCTTGACCCTGCCGGATCCGACAG
CAACAACACCAAGGCTTTGCGAACCTTCGCTGTTGGAACCAATGCCACTT
TCTGGACGTTTCTCGTGTTTCGCCATACCTTGACCCGTGCTTTTCTTTTC
TGCGGTGGAATAACGAAATGCGGCGGGACTCTGAAATGCGGCGGAACTCT
CAAATACGGCGGAATTCCACCTTCGCGGCGGAACGCCACTTTTTGGGCGG
GACTCTCATTTGCGGCGGAATTCCCGCACGACGGTTTCAGGCGGAGGGCC
TGGACGCGCAAGCAGACGCAGAGGTGGACAAGGTCATCGTCGAACTCACC
GACGGCCTTCTGGAGGGGGCGGTAGATGCGCCGACCGCGGTGCCCGAGGC
GGCTGAAGCTACGGCGGCGCCTGCGGCCGCCGCCGCCGCCGCGATCGCCG
CTGACGAGGAGGATGAGGCGACGAAGGCGATGAAGGCCCGTTTGGAATCC
CTCTGATCTGAATAGGAGCAGCCGGTGGCATGGACGACGTGTTTGGAGTT
TCCTCCTAGAGCAGAAGCCGGCGCCCGGCCGTGACGGCCCGATTGGAGTC
CCTGATTTTAGTATGTAGGGACTGGTTAGGGTTCCTTTCGAGTTGAAACA
GCCGGCGATGTTGAATATCGATCTGGATTTTGTTCGAGGAGAAGAGGTCG
GCGCCGTGGAGGATCGATTGGATGTTTGTCCTCGCGGCAGAAGCCGGCTC
CATGAATTATCGGATGGAGATTCCCTCTTGTAGAACGAGTCGGCGCCGTG
GAGTAGCTGTTCCAAGTCTGATTCCTCAAAGAGTCGGCGCCAAGTGCTAT
CGATTGGTTTCCCTTTTGGAGGAGATACAGTGCCGGCCCGGTGGCAAGAA
ACACTTAATTCGAGCGAGGCTCATTTCTTATTATGCCCCCCACCACTGAT
CGCAGGCTTTTATGTAGTGTTTAGTGTAGCTCCGGCTGATGAACGCAATT
TCTTACGGCATATTTCTTAGGAAAGCTATTAATGTGAGCCTCGGTTTTAC
GAAGGTGTTTGTTATGAGCGGGCCGGCGCTGTATGGCAGCTACCATACAG
GACAGGTTCCATTTTCATCCTGATCGAAGAGGCCGGCGCCGTGGAGGATC
CTTTACCCGTCTGCGTCCATGTCCAGCAGGAGCAATTCGAGGAAGATTGC
GGCTTCCAGTTCCCGAAGCGGTCCATGAGTTGCGCCGCATTTCGCCGATG
AGAAACTTGAGGGTGCATGAAGGATTCTCAGATCGGCTCGACTGATCGGA
GTCTCGCCGCAAACCAGCGCCTGATAACGCTGTGTGTTCCTCCGGCCCGT
TGCTACACACGGTGCGAGCTCGCGAGAGGTGGCACGAGGCATCAGTATCT
CCCTTGAATGCGAGCCAAACTTGCGTAGGTATCCACGTTCCTGACTATCA
CGTACTCGCTTGCAGCACGTGCCTGACGGCCACTTGCGGCGTGGCGGTTG
TGATGGACCTCACATTGTGCAGGAGCTTCCCCTGTTTTGCGGTTCTCCTC
GAGAGGAGTTTGGGTACAGTATCCTTGTTCAGCTGCAGATGGTGGGGTGT
GGGGGTCGTCTCGTTTCCCATAATTGCAGTGCGAACAGGGAGAAGGGGGG
GGCTCCATCTTGTTTGTTTCAGCGGGATGCAAGCCCCTTGCGGCACTGTA
GCAAGTTTGACTGGGGAAATATCCCGCAAGGGGAAAACGGGGGGCGGGCT
GTTTGTGCATTGTTTATACACCCCGGAGTGTTAGCCGCTTCAAGCTCGAG
GTTGTGATTTTCGGTGTTGGACGGGGGTCCATCCCGCCGTCGTTTTCAAG
CACAAGGTGTCTGTACTCTCGTGCTCTTGTTCTCGCTTTGCTATGAATGA
AAACCTGTCAATTCGGGGTATCGTAGCTGAATAACTCTGTACGTCAATCG
CAGATTTCGTCACGGGGGTTCAGCGAATCGTGTATTTGCAGGGTGGAGAC
ATTTACTTATCCCTGCTCTTCCTTAAGGGGTGGTTGGCGGTTCGGATGTG
TGTCGTGGAATTATATTTTTCTCAAGCCTTGGCTGAGACGTGTAAAAATA
CATTTTACTCGTTGCTACTTGCAGGTGCTCTTCGTTTTGAGATCCGCCCC
TCCAGAGGGATGGCGGGCCGTTTCGGATACTCTGGTTCGACGCCTTGGCA
ACGACACAAATGAAAAATCGAGCGTGAGAAGAAAGCAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig83:177447..182134-

>mRNA_P-fluviatile_contig83.14845.1 ID=mRNA_P-fluviatile_contig83.14845.1|Name=mRNA_P-fluviatile_contig83.14845.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1056bp|location=Sequence derived from alignment at P-fluviatile_contig83:177447..182134- (Porterinema fluviatile SAG_2381)
ATGGCCAAGGAGGGGACCCGCAATCAAAAGGCCATTCGAATGGCCAAGGA
GGGGACCCGCAATCAAAAGGCCATTCGACTATTGGCGAAGGAACTGGTGG
CCTCTCGAAACGCCAAGAACCGCATGTTCGAGGGAAAGGCACAGCTGCAC
TCTGTGCAGATGCAGCTGCAAAACCAATTAGCTATTGGCGAAGGAACTGG
TGGCCTCTCGAAACGCCAAGAACCGCATGTTCGAGGGAAAGGCACAGCTG
CACTCTGTGCAGATGCAGCTGCAAAACCAATTAGCTTTGATCAAGGTCAC
CGGCGTGATCAAGAAGAGCACGGAGATCATGGCGTCCATTGGGCACTTTG
ATCAAGGTCACCGGCGTGATCAAGAAGAGCACGGAGATCATGGCGTCCAT
TGGGCAGTTGGTAAAGATCCCAGAGATGCAAGAGAACATGTTCAAGCTAG
CAACGGAGATGGAGAGGGCTGGCTTGGTGGAGGAGATCGTGTCCGATGGA
CTCGCACTAACTGATGTTGGTAAAGATCCCAGAGATGCAAGAGAACATGT
TCAAGCTAGCAACGGAGATGGAGAGGGCTGGCTTGGTGGAGGAGATCGTG
TCCGATGGACTCGCACTAACTGATGCGGAGGGCCTGGACGCGCAAGCAGA
CGCAGAGGTGGACAAGGTCATCGTCGAACTCACCGACGGCCTTCTGGAGG
GGGCGGTAGATGCGCCGACCGCGGTGCCCGAGGCGGCTGAAGCTACGGCG
GCGCCTGCGGCCGCCGCCGCCGCCGCGATCGCCGCTGACGAGGAGGATGA
GGCGACGAAGGCGATGAAGGCCCGTTTGGAATCCCTCTGAGCGGAGGGCC
TGGACGCGCAAGCAGACGCAGAGGTGGACAAGGTCATCGTCGAACTCACC
GACGGCCTTCTGGAGGGGGCGGTAGATGCGCCGACCGCGGTGCCCGAGGC
GGCTGAAGCTACGGCGGCGCCTGCGGCCGCCGCCGCCGCCGCGATCGCCG
CTGACGAGGAGGATGAGGCGACGAAGGCGATGAAGGCCCGTTTGGAATCC
CTCTGA
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