mRNA_P-fluviatile_contig83.14844.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig83.14844.1
Unique NamemRNA_P-fluviatile_contig83.14844.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig83.14844.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig83contigP-fluviatile_contig83:174046..176731 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHypothetical protein
Ec32 orthologEc-02_000220.1
Exons4
Model size654
Cds size654
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig83.14844.1prot_P-fluviatile_contig83.14844.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig83 174046..176731 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817285.2937608-CDS-P-fluviatile_contig83:174045..1742901622817285.2937608-CDS-P-fluviatile_contig83:174045..174290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 174046..174290 +
1693571943.7764926-CDS-P-fluviatile_contig83:174045..1742901693571943.7764926-CDS-P-fluviatile_contig83:174045..174290Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 174046..174290 +
1622817285.308839-CDS-P-fluviatile_contig83:174665..1747911622817285.308839-CDS-P-fluviatile_contig83:174665..174791Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 174666..174791 +
1693571943.7865245-CDS-P-fluviatile_contig83:174665..1747911693571943.7865245-CDS-P-fluviatile_contig83:174665..174791Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 174666..174791 +
1622817285.3206515-CDS-P-fluviatile_contig83:175781..1758961622817285.3206515-CDS-P-fluviatile_contig83:175781..175896Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 175782..175896 +
1693571943.8001246-CDS-P-fluviatile_contig83:175781..1758961693571943.8001246-CDS-P-fluviatile_contig83:175781..175896Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 175782..175896 +
1622817285.330691-CDS-P-fluviatile_contig83:176563..1767311622817285.330691-CDS-P-fluviatile_contig83:176563..176731Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 176564..176731 +
1693571943.809827-CDS-P-fluviatile_contig83:176563..1767311693571943.809827-CDS-P-fluviatile_contig83:176563..176731Porterinema fluviatile SAG_2381CDSP-fluviatile_contig83 176564..176731 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig83.14844.1

>prot_P-fluviatile_contig83.14844.1 ID=prot_P-fluviatile_contig83.14844.1|Name=mRNA_P-fluviatile_contig83.14844.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=218bp
MSRGSWRGAEALQKRRREDRAIRRANERERLRRAREIEDWHITGEPAFRP
KERSYPHGGGADGAACAAFLRSAERAMHLFDRGKTVTMEMSAALACLERK
HSALVHACNEFEDKHSSHLYPERIESGNWEVGAKELRLFVDAAQRMTSAQ
RLAFTDVLAPSRDKREGYIGPVDSLAARLQRAKQGSIEQAVSGVLFESEG
RAQGTRRFAREVRATAAR
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mRNA from alignment at P-fluviatile_contig83:174046..176731+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig83.14844.1 ID=mRNA_P-fluviatile_contig83.14844.1|Name=mRNA_P-fluviatile_contig83.14844.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2686bp|location=Sequence derived from alignment at P-fluviatile_contig83:174046..176731+ (Porterinema fluviatile SAG_2381)
ATGTCTCGTGGCTCGTGGAGGGGTGCAGAGGCTTTGCAGAAACGGCGACG
TGAGGACAGGGCTATCCGACGAGCGAACGAGAGAGAGCGACTCAGGCGGG
CGCGGGAGATTGAAGACTGGCATATCACGGGCGAGCCCGCCTTTCGGCCA
AAAGAGCGAAGCTACCCACACGGCGGGGGAGCTGACGGTGCTGCTTGTGC
AGCTTTCTTACGCTCGGCAGAGAGAGCAATGCACCTTTTTGACAGGTGCG
CAGGTGCTCAATATCGTGCGTTAAATAAGGTGCTCGAGGCTCTTTGCTTA
ATCTCCATCATGAGGATTTCAAGAAGGGGTGCACCGCAAAGGTGCATAGA
GTCGTGCAAAGGTCAATGCATGTTCAAATCTACAACGTAACCCACAGCAG
GGTGGTTGATGACGCTGCAGCAATCGCACTGTATTCCCATACAGCACAAA
TTACTCACCAACAACAGGAAAAACGCCCGAGAGGGCCCGCGCTACGAGCT
TACATACGTTTTTCTAATTGCAGAAGCCCTCCGTGTGTGCCATTAAAGCT
GAGTTCACGTTCTGAGGCTGCGGCAAATTCCGATTGCACTTTTCACGTCC
CTTTTTTGGCCCAACTGCAGGGGGAAAACCGTCACAATGGAGATGTCCGC
TGCGCTCGCTTGTCTCGAGCGAAAGCATTCGGCGCTCGTACACGCCTGCA
ATGAATTCGAAGACAAGCACTCGTCACACCTGTATCCAGAACGAATGTGA
GCGCGCCTGTTGTTGTCATTTCCTCACATTGTAACATTTCCGATCACCGA
AAGTACCTTTAAATATCCGCCTCCTATCCTTCCGATCGACTCCATGGCCA
TAGGTCATAAAAATACCCCAGAGACGCACAAGAAAAAGCCGAAATGCAAG
TGGAAATGACACATGGCGAAAATCTGATGTCGCGTCGCTTATACTGCAGG
AGCGTTTTATGGTGGCAAATCTTGAGGAACACCTGAATCCCCCTTCAGTA
AAGCATCCTCACGCCCTTGCAGAATCTTTGCACGTGGTTGGGCATCTTTT
TCGAGGCCTGTCGCAGATGTAAGCTGTTATGAAGCAGAGCACCTCGAGCG
TCGGCCAGCACGAGGTGGCGTGCACGCAAGAACCCCCCACGAGTGACACA
TGGTCTTGTTCGCACCTATCGCAGCTTGTGAGATACCACCAACCGGGGTC
GGTGTTCAGGGCTCAATATCTCAAAGCAAGAGGTTTACAAACAAAAGGCG
ATGCGCGAGACAAAAGCCTTGTCATGAATCCTTTCTAGCGCCGCTCTTCT
GTCGCAGGCATGTGCCTGGCCGGAAGGACATCAAGCATCGAAATCCAGCG
CACAAAGTGTAGTTTCTTCGTGTAGACAACAAAACGCCACAACCTCGAAG
GTTTAGCAGGCTCCATATCATGTATTTTCTCCAAGTGCCTTTAGAGCAAA
ATTGATGAGAAGGAAGCGGACAAGAGAGTGGCAGGGATGAACTCGTGTCG
TTGGACGCACTGTGCAGTATTCGTCGAAATACCGTGCCTCCACATTCATG
TAGACACCTGCAAAGATTCAACGTCCAAAGTCCCCAAAACACAAACATTT
CGCGCGATACAGGAATGAAAAGGAATTGGGAAAGTTTTAGCGCAACTCCC
CGAGCTCTGATCCACGAAACCTCCTTCCGCCACTTGCTGATTTGTTGCCT
GACTTCGTTTCCCCGGACGGGAGGGGACGCCGATAGCGAGAGCGGAAATT
GGGAGGTCGGGGCCAAGGAGCTACGGCTGTTCGTGGACGCCGCACAACGG
ATGACATCCGCGCAGCGCCTTGCTTTTACCGACGTTCTCGCTCCGAGTCG
GGTGAGAGTACAGCAGGGGGGGGCATATCTTGCGGATGAAACAATGCTGT
TTAGTGCGGGTGAAACCAGTCGGCGTTAAACCTCTCTCACATAAAGATGT
ATCTGTGCAAAACAATATAGAAAAGTACGGGTGCCGTCCACAGTGTCGGT
GAAAACTTTTCTTCCCACCCACGTACTATTGCGGGACCCCCTCTGTACAG
GGAGAAACACGACAATTGAACGGCTTTCTTTTTTGCGCAGGCATGTTGGA
GGCACTGCAAACGACCCCTGACGTGGTGTATTGGATAAAACCAAGAAATG
GCATACACGCCCAAAAGAACGTCCTATTTGAGCACGTCATTCTTGGTGTG
CAGACAATGTGCCAGTACCGATCCGCCGGTCTTGTGCCATCGAAGATCAC
CGAGACGGTCAGATACAGGTAACCAAACTTAACTCACTGCCACATTTATA
TGCAATGGAAATATGGTTGAAGAGATTGGCTATCGCTCTCTGTACCTGTC
TGTGGTTCTAGTCTATACTACAGCATATCGGACGGCAAATGATGTACTGC
AGTAACACAGAAAAATAAGGTAAATCTCCAAGCCTGGTAATGCTTACCTA
CAACCGTTTGCTCTGTCTCTCTCGCCCGCGTGAACAAATACATGGCGACG
ACTGCTCCTCGCCAACAGGACAAACGCGAAGGTTATATCGGCCCCGTGGA
CTCCTTGGCAGCGAGGCTGCAGCGAGCGAAGCAGGGATCGATCGAGCAGG
CCGTCTCCGGGGTGCTATTCGAGAGCGAGGGGCGCGCCCAAGGGACGAGA
AGATTCGCCCGGGAGGTCCGAGCCACCGCTGCCCGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig83:174046..176731+

>mRNA_P-fluviatile_contig83.14844.1 ID=mRNA_P-fluviatile_contig83.14844.1|Name=mRNA_P-fluviatile_contig83.14844.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1308bp|location=Sequence derived from alignment at P-fluviatile_contig83:174046..176731+ (Porterinema fluviatile SAG_2381)
ATGTCTCGTGGCTCGTGGAGGGGTGCAGAGGCTTTGCAGAAACGGCGACG
TGAGGACAGGGCTATCCGACGAGCGAACGAGAGAGAGCGACTCAGGCGGG
CGCGGGAGATTGAAGACTGGCATATCACGGGCGAGCCCGCCTTTCGGCCA
AAAGAGCGAAGCTACCCACACGGCGGGGGAGCTGACGGTGCTGCTTGTGC
AGCTTTCTTACGCTCGGCAGAGAGAGCAATGCACCTTTTTGACAGATGTC
TCGTGGCTCGTGGAGGGGTGCAGAGGCTTTGCAGAAACGGCGACGTGAGG
ACAGGGCTATCCGACGAGCGAACGAGAGAGAGCGACTCAGGCGGGCGCGG
GAGATTGAAGACTGGCATATCACGGGCGAGCCCGCCTTTCGGCCAAAAGA
GCGAAGCTACCCACACGGCGGGGGAGCTGACGGTGCTGCTTGTGCAGCTT
TCTTACGCTCGGCAGAGAGAGCAATGCACCTTTTTGACAGGGGGAAAACC
GTCACAATGGAGATGTCCGCTGCGCTCGCTTGTCTCGAGCGAAAGCATTC
GGCGCTCGTACACGCCTGCAATGAATTCGAAGACAAGCACTCGTCACACC
TGTATCCAGAACGAATGGGGAAAACCGTCACAATGGAGATGTCCGCTGCG
CTCGCTTGTCTCGAGCGAAAGCATTCGGCGCTCGTACACGCCTGCAATGA
ATTCGAAGACAAGCACTCGTCACACCTGTATCCAGAACGAATCGAGAGCG
GAAATTGGGAGGTCGGGGCCAAGGAGCTACGGCTGTTCGTGGACGCCGCA
CAACGGATGACATCCGCGCAGCGCCTTGCTTTTACCGACGTTCTCGCTCC
GAGTCGGCGAGAGCGGAAATTGGGAGGTCGGGGCCAAGGAGCTACGGCTG
TTCGTGGACGCCGCACAACGGATGACATCCGCGCAGCGCCTTGCTTTTAC
CGACGTTCTCGCTCCGAGTCGGGACAAACGCGAAGGTTATATCGGCCCCG
TGGACTCCTTGGCAGCGAGGCTGCAGCGAGCGAAGCAGGGATCGATCGAG
CAGGCCGTCTCCGGGGTGCTATTCGAGAGCGAGGGGCGCGCCCAAGGGAC
GAGAAGATTCGCCCGGGAGGTCCGAGCCACCGCTGCCCGGGACAAACGCG
AAGGTTATATCGGCCCCGTGGACTCCTTGGCAGCGAGGCTGCAGCGAGCG
AAGCAGGGATCGATCGAGCAGGCCGTCTCCGGGGTGCTATTCGAGAGCGA
GGGGCGCGCCCAAGGGACGAGAAGATTCGCCCGGGAGGTCCGAGCCACCG
CTGCCCGG
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