mRNA_P-fluviatile_contig83.14843.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig83.14843.1 vs. uniprot
Match: D7G7G9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7G9_ECTSI) HSP 1 Score: 350 bits (899), Expect = 2.630e-105 Identity = 224/442 (50.68%), Postives = 278/442 (62.90%), Query Frame = 2
Query: 488 MLDNQSIAPRLESVLSSVSPPSEEAALQVVDEMLTEAIWRSHIVTLDEVAISRAAQKTALGLVRLMGMTQEFLPRDKGEPETEETTQENGEPEPGEIDLWARGRVASHRKNVIRPADVDSLSDDQTSD-DFSLASSSGPMSIKRVESSTSERNAHEGGNGGGQSKPPAKLPLTQALSIRKAGGVNRGXXXXXXXSGMASMSGVSEGPGTSRSFASSAKCLVNPAMGRLFDTADRRKVGWLNVTDLQAFLEYHGHKQWANPNFIKSTLTDLGILRGGNEPIKQIHFLRRAFSLVFIFFLMQKDPLMEFSARPLPPDQLSLGVPEQARELAVILKEVASRFNDKPVAARRRLSRALASQSLIQLNTTVPAHAPAGEGXXXXXXXXXXTGTRPRQGDGGGDAVDLANGWENQRWSHQLSPQVSVRDPVVTPRPSTVPPGAAAGGR 1810
MLD+QS+ PRLESV+SSV+PPSE+AA QVVD + T AIWRSH L++++ + AQ+T LGLVRLM MT EFL RD + + E EP P ID+ ARGRV ++ + +P D D SDD SD D S S+SG + SST++R + G G G + A LPL A++I+K G+NRG SGM + SEGP T+RS ASSAK +V+PAM LFD ADRR VGWLNV FLEYHGHKQWANP FI++TL L I +GGNEPI + HF+R F+ FLM+KDPLMEF+ARP+PPD+ S+GVPEQARELA ILKE+ASR KPVAARRRL+RAL S+ ++ A G G+ G A G + R SHQ+SPQV+VRD V RPST P G A +
Sbjct: 1 MLDSQSLVPRLESVVSSVNPPSEDAAYQVVDAVTTAAIWRSHQAVLEKISRACGAQQTTLGLVRLMAMTNEFLDRDHPDGGPNTASLEGDEPVPCHIDVRARGRVGTNCWTLTQP-DGDGFSDDTISDGDASCVSTSGGT-VTGERSSTNKRQSR-GVEGSGSFETLADLPLPAAINIKK--GINRGRSMSRHGSGMMTTP-TSEGPSTARSQASSAKSVVHPAMAMLFDMADRRDVGWLNV-----FLEYHGHKQWANPAFIRATLVTLDISKGGNEPINRHHFVR------FLLFLMRKDPLMEFAARPIPPDKWSIGVPEQARELAEILKEIASRSRTKPVAARRRLNRALTSKQVLGQQNAPAAQVSTAAG-----------------GEDGATGDAFAKGLD--RSSHQVSPQVNVRDCVGYRRPSTSPAGVGASSQ 406 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig83.14843.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig83.14843.1 >prot_P-fluviatile_contig83.14843.1 ID=prot_P-fluviatile_contig83.14843.1|Name=mRNA_P-fluviatile_contig83.14843.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=460bp MPPQVTRRGSIALSMLDNQSIAPRLESVLSSVSPPSEEAALQVVDEMLTEback to top mRNA from alignment at P-fluviatile_contig83:153448..173583- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig83.14843.1 ID=mRNA_P-fluviatile_contig83.14843.1|Name=mRNA_P-fluviatile_contig83.14843.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=20136bp|location=Sequence derived from alignment at P-fluviatile_contig83:153448..173583- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig83:153448..173583- >mRNA_P-fluviatile_contig83.14843.1 ID=mRNA_P-fluviatile_contig83.14843.1|Name=mRNA_P-fluviatile_contig83.14843.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2760bp|location=Sequence derived from alignment at P-fluviatile_contig83:153448..173583- (Porterinema fluviatile SAG_2381)back to top |