mRNA_P-fluviatile_contig82.14831.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig82.14831.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE) HSP 1 Score: 582 bits (1499), Expect = 6.630e-186 Identity = 293/347 (84.44%), Postives = 312/347 (89.91%), Query Frame = 1
Query: 2071 DASFSHAAFFHEMAQSQEGGVSSLSVGTMTFKEAFLFYVEYIARATQGGGAGEAFMKRYVAQPRIPEHARYGKAKETVEKKLRISGESLCGAWRQDFRDTVMRYPHYGYHHVLGDEVHGQDRCSACNRSNRTSVVAFLSGAEYDPNRVWDGLRWDKHLPENWDDPAAMALSKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKIRGDDGLEPENFRGEGSPQTSKKKKMRCLNFTENEFESLSSLLTKADDLNGVKWGGRAGVRGGHGKTFLQMGAASSILDWLSGEAPPEQFGGLG-GGLVTEGDQAVEXXXXXXXXXEFH-VGRGRRWRTVGSGGGRYG 3105
DA FSHAAFF+EM QS++GGVSSLSVGTMTFKEAFLFYVEYIA+ATQG GAGEAFMK+YVAQPRIPEHARYGKAKE VEKKLRISGESLCG+WRQDFRDT+MRYPHYGYHHV GD DRCSACNRSNRTSV+AFLSG+EYDPNRVWDGLRWDKHLPE+WDDP A A++KQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKV+AKIRGD GLEPENFRGEG PQTSKK+K RCLNF+ENEFESLS+LL KADDLNGVKWGGRAGVRGGHGKTFL+MGAASSILDWLSGEA Q+GGL G L +G XXXXXXXXX VGRGRRWRTVGS GRYG
Sbjct: 631 DAFFSHAAFFNEMEQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGELEGQGPXXXXXXXXXXXXXXXXDVGRGRRWRTVGSSSGRYG 977
BLAST of mRNA_P-fluviatile_contig82.14831.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI) HSP 1 Score: 323 bits (827), Expect = 4.890e-98 Identity = 168/201 (83.58%), Postives = 179/201 (89.05%), Query Frame = 1
Query: 2509 RVWDGLRWDKHLPENWDDPAAMALSKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKIRGDDGLEPENFRGEGSPQTSKKKKMRCLNFTENEFESLSSLLTKADDLNGVKWGGRAGVRGGHGKTFLQMGAASSILDWLSGEAPPEQFGGLGGGLVTEGDQAV--EXXXXXXXXXEFHVGRGRRWRTVGSGGGRYG 3105
+VWDGLRWDKHLPE+WDDP A A++KQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKV+AKIRGD GLEPENFRGEG P TSKKKK RCLNF+ENEFESLS+LL KADDLNGVKWGGRAGVRGGHGKTFL+MGAASSILDWLSGEA Q+G L G + EG +A XXXXXXXXX FHVGRGRRWRTVGS GGRYG
Sbjct: 58 KVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGDL-EGQRAGLGXXXXXXXXXXXFHVGRGRRWRTVGSSGGRYG 257
BLAST of mRNA_P-fluviatile_contig82.14831.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.090e-74 Identity = 215/358 (60.06%), Postives = 237/358 (66.20%), Query Frame = 1
Query: 1441 GKNGGLAQGEKEAPSWSSLPATGAGRATPPKRKSSMVNYRDMLHNNDRSSSSDDSGIGKEAGDXXXXXXXWXXXXXXXXXXXXXXXXXSGGEGIHGERGKKQNCARDEDLDEEDGFAEVLRDXXXXXXXXXXXXXXXXXXXXXXXXXATKKDKWKTRRTARSERGVEDETKKDGTSRRKGRGSQNRYDXXXXXXXXXXXXXXXXXXXXXXDASFSHAAFFHEMAQSQEGGVSSLSVGTMTFKEAFLFYVEYIARATQGGGAGEAFMKRYVAQPRIPEHARYGKAKETVEKKLRISGESLCGAWRQDFRDTVMRYPHYGYHHVLGDEVHGQDRCSACNRSNRTSVVAFLSGAEYDPNRV 2514
GK+GG +G KE PA GRAT +R+SSMVNYR+MLH + +SS XXXXX W S GE + G K CARDED+DE+D FA L+D XXXXXXXXXXXXXXXXXXXXXX + N D XXXXXXXXXXXXXDA FSHAAFF+EM QS++GG+SSLSVGTMTFKEAFLFYVEYIA+ATQG GAGEAFMK+YVAQPRIPEHARYGKAKE VEKKLRISGESLCG+WRQDFRDT+MRYPHYGYHHV GD DRCSACNRSNRTSV+AFLSG+EYDPNRV
Sbjct: 483 GKSGG--KGIKEE-----APAAATGRATRTRRRSSMVNYREMLHG--KGTSSXXXXXXXXXXXXXXXXSGWDNDDEDE----------SDGELDGKKSGDK--CARDEDIDEDDSFAVTLKDDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRNHR-------------YNEPDDGDEDNFIDXXXXXXXXXXXXXDAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806
BLAST of mRNA_P-fluviatile_contig82.14831.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI) HSP 1 Score: 92.0 bits (227), Expect = 5.970e-15 Identity = 70/215 (32.56%), Postives = 105/215 (48.84%), Query Frame = 1
Query: 2182 YVEYIARATQGGGAGEAFMKRYVAQPRIPEHA--RYGKAKETVEKKLRISGESLC--GAWRQDFRDTVMRYPHYGYHH--------VLGDEVHGQD----------RCSACNRSNRTSV-VAFLSGAEYDPNRVWDGLRWDKHLPENWDDPAAMALSKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVAAKIRGDDGLEPENFR-GEGSPQ 2754
Y+E++A+A QGGG G AFM+++ ++ HA Y KA + E ++ ES+ G+W Q+F V YP G+H + DE GQD C+AC+R R ++ +L+G+ G + SKQ+ + LG C++KSHL+H+L HYKLYLV KV + G+ PE+ R GE + Q
Sbjct: 940 YLEFLAKAVQGGGKGAAFMEKFDSK----RHAFTDYRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSR-------GGYK-----------------SKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKVREHM-DTTGVGPEDLRKGEWAEQ 1125 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig82.14831.1 >prot_P-fluviatile_contig82.14831.1 ID=prot_P-fluviatile_contig82.14831.1|Name=mRNA_P-fluviatile_contig82.14831.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1036bp MSAARRRRVMLESDDEDGQVRRAGDEGLVTPRVVPPSEQARPTKSHPRAKback to top mRNA from alignment at P-fluviatile_contig82:387483..398662+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig82.14831.1 ID=mRNA_P-fluviatile_contig82.14831.1|Name=mRNA_P-fluviatile_contig82.14831.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11180bp|location=Sequence derived from alignment at P-fluviatile_contig82:387483..398662+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig82:387483..398662+ >mRNA_P-fluviatile_contig82.14831.1 ID=mRNA_P-fluviatile_contig82.14831.1|Name=mRNA_P-fluviatile_contig82.14831.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6216bp|location=Sequence derived from alignment at P-fluviatile_contig82:387483..398662+ (Porterinema fluviatile SAG_2381)back to top |