mRNA_P-fluviatile_contig82.14824.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig82.14824.1 vs. uniprot
Match: D7FPB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB0_ECTSI) HSP 1 Score: 488 bits (1255), Expect = 4.020e-170 Identity = 260/358 (72.63%), Postives = 298/358 (83.24%), Query Frame = 1
Query: 22 MLQALARMAGSPLCDGRLVDEGLFEALVVLCFNEIASFVHGCQNYLRQRREIEGEVAAGPGGYAAGDMDGIGGRGLGGE----RSASVVSVGALPAASGVGGRQREAEAKFSEEKLEVAMNVARTGMSMLAHLAAKGHGRRALHAGVLAYVNSVPIGAGDDPHMTGSLSQLVLELSRVAMGGEDDRLSFVAQGPLDAIMRCLKGGRAAQQQCALDALTSVCLLTETKPLVFSREVLGEVLTLAAVQEHIQPAAFILHQFSLIAEWRSPLVRGGCVELLVGAIAHATGPEAPPEAEARSIIGSAVAALGQITKLEGAGRVLVAVGGLPHLLRLSRSEHENIRRDSNKALRNIGHKGRER 1083
ML+AL RMAGSP C+ RL+DEGLFEALV LCFNE+ASFVHGCQNYLRQRREIEG ++ R S+VS G + A +G GGR++EAE +F+EEKLEVAM+VART M+M AHL A+GHGRRALHAGVLA++NSVPIGAGDDPHMTGSLSQLVL+LS VAM GE++RLSFV QGPLDAIMRCL+GGRAAQQQCALDALT+VCLL+E KPLVF REVLGEVL LAAVQEH+QPAAF+LHQFSL++EWRSPLVRGGCV+LLV AIAHATGPEAPP+ EA I+ SAVAA+ QITKLEGAGRVLV GGL LLRLSRSE ENIRRD+ +AL++IGH+GR+R
Sbjct: 1 MLKALERMAGSPRCEKRLIDEGLFEALVGLCFNEVASFVHGCQNYLRQRREIEGVFSSAXXXXXXXXXXXXXXXXXXXXXXXARCESIVSTGGMSAGAGAGGRRKEAEGRFTEEKLEVAMDVARTCMAMFAHLTARGHGRRALHAGVLAHINSVPIGAGDDPHMTGSLSQLVLDLSAVAMEGEENRLSFVGQGPLDAIMRCLRGGRAAQQQCALDALTTVCLLSEMKPLVFCREVLGEVLMLAAVQEHVQPAAFVLHQFSLLSEWRSPLVRGGCVDLLVAAIAHATGPEAPPQEEACPILESAVAAIRQITKLEGAGRVLVDAGGLSQLLRLSRSERENIRRDACQALKHIGHRGRDR 358
BLAST of mRNA_P-fluviatile_contig82.14824.1 vs. uniprot
Match: A0A6H5KGE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGE2_9PHAE) HSP 1 Score: 146 bits (368), Expect = 7.010e-40 Identity = 76/101 (75.25%), Postives = 89/101 (88.12%), Query Frame = 1
Query: 781 QFSLIAEWRSPLVRGGCVELLVGAIAHATGPEAPPEAEARSIIGSAVAALGQITKLEGAGRVLVAVGGLPHLLRLSRSEHENIRRDSNKALRNIGHKGRER 1083
+FSL++EWRSPLVRGGCV+LLV AIAHATGPEAPP+ EA I+ SAVAA+ QITKLEGAGRVLV GGLP LLRLSRSE ENIRRD+ +AL+++GH+GR R
Sbjct: 9 KFSLLSEWRSPLVRGGCVDLLVAAIAHATGPEAPPQEEACPILESAVAAIRQITKLEGAGRVLVDAGGLPQLLRLSRSERENIRRDACQALKHMGHRGRAR 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig82.14824.1 >prot_P-fluviatile_contig82.14824.1 ID=prot_P-fluviatile_contig82.14824.1|Name=mRNA_P-fluviatile_contig82.14824.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=355bp MLQALARMAGSPLCDGRLVDEGLFEALVVLCFNEIASFVHGCQNYLRQRRback to top mRNA from alignment at P-fluviatile_contig82:330326..336493+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig82.14824.1 ID=mRNA_P-fluviatile_contig82.14824.1|Name=mRNA_P-fluviatile_contig82.14824.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6168bp|location=Sequence derived from alignment at P-fluviatile_contig82:330326..336493+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig82:330326..336493+ >mRNA_P-fluviatile_contig82.14824.1 ID=mRNA_P-fluviatile_contig82.14824.1|Name=mRNA_P-fluviatile_contig82.14824.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2130bp|location=Sequence derived from alignment at P-fluviatile_contig82:330326..336493+ (Porterinema fluviatile SAG_2381)back to top |