mRNA_P-fluviatile_contig82.14822.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig82.14822.1
Unique NamemRNA_P-fluviatile_contig82.14822.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5JCM4_9PHAE (C3H1-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCM4_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 3.760e-81
Identity = 158/342 (46.20%), Postives = 209/342 (61.11%), Query Frame = 1
Query:  409 AERFALMQQDHENVVAIVSDLRATVSDLSMQNERAAAAAAPTATGPAPXATASPAATGLTTMWPSPSNRLAEKAEFESRAAAWRVGKVHWALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSG----VTRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRHGRGEGD 1422
            AE+ A +QQD++N+   +S + AT+  L    ++ AA A      P     A  AA+  +        R A KA+FES A+AWR G+  W LR+ RG +  +KE + T++ G V CTDKV  QL+ M+GFNVL F P     GE+SVADHFD+TC AI+RVLKFGL   V   AA+L RLQPLE A+  A+   RMQLLRH   F+   +R ILA +PN DFR +S  ++ W+L +Q+L  APA+FD++ PPPVPAF G+ SFA SGSHLIRM A  SG    V    R+  AP+             KR+   +VCF +RD GSC++GDSC++RH  G  D
Sbjct:   78 AEQIAALQQDNDNLAGQLSVISATLQQLVDARQQGAAQAGGPVVAPGSGLDAGAAASPGSAA---DRERRAAKADFESNASAWRSGRTVWTLRSLRGFDLQSKETLKTVMAGFVECTDKVWHQLRYMSGFNVLEFFPDSER-GEMSVADHFDMTCAAILRVLKFGLAPSVPEQAAALERLQPLETAMQEAQINLRMQLLRHHGAFSGQASRDILAGIPNEDFRQWSNEIMTWMLPLQHLSTAPANFDQFPPPPVPAFTGIASFATSGSHLIRMFAARSGGGAPVAGTKRRASAPADGGG---------KRRR--QVCFKYRDKGSCRFGDSCRYRHDHGAAD 404          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5L5C2_9PHAE (C3H1-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C2_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 2.390e-71
Identity = 158/352 (44.89%), Postives = 210/352 (59.66%), Query Frame = 1
Query:  376 LAAGVGPGGIPAERFALMQQDHENVVAIVSDLRATVSDLSMQNERAAAAA------APTATGPAPXATASPAATGLTTMWPSPSNRLAEKAEFESRAAAWRVGKVHWALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSGVTRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRHGRG 1413
            L AG   G   A +  ++QQD+EN+VA VS L  ++  L + N+   A +      A    G   X                   R A KAEFES A+AWR G++ WALR KRG++   KE + T++ G V  TDK LQQL++M+G NVL+F PVG++ G++SV DHFDLTC AI+ VLKFGL A  A +AA+LARL P+E A+L AR T RMQ LRH  +F    +R   ADLPN DFR ++  ++LW+L MQ LP+ P SF+ +GPPPVP   G+  F+ SGS  +R+   V G             XXXXXX   ++ +R    KVCF +RD+ +C+WGDSC FRH  G
Sbjct:  111 LGAGAASGAPGALQLVMLQQDNENLVAKVSALEQSLQQL-LNNQGGGAGSHVVGPHAADGAGXXXXXXXXXXXXXXXXXXXXXXXRFA-KAEFESTASAWRAGRLMWALRGKRGIDVPNKETLQTMMGGTVTGTDKTLQQLRTMSGLNVLDFFPVGNS-GKLSVPDHFDLTCAAIVNVLKFGLSATSADNAAALARLLPMEQAMLSARGTLRMQALRHMGDFQGRGSRGTFADLPNDDFREWANAVMLWMLPMQNLPVPPESFERFGPPPVPRLDGINGFSMSGSIALRIFGTV-GXXXXXXXXXXXXXXXXXXXAGGDSKRRS---KVCFEYRDSQTCRWGDSCVFRHATG 455          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5JN35_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN35_9PHAE)

HSP 1 Score: 251 bits (642), Expect = 9.980e-70
Identity = 162/352 (46.02%), Postives = 212/352 (60.23%), Query Frame = 1
Query:  376 LAAGVGPGGIPAERFALMQQDHENVVAIVSDLRATVSDLSMQNERAAAAA------APTATGPAPXATASPAATGLTTMWPSPSNRLAEKAEFESRAAAWRVGKVHWALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSGVTRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRHGRG 1413
            L AG   G   A +  ++QQD+EN+VA VS L  ++  L + N+R  A +      A    G   X                   R A KAEFES A+AWR G++ WALR KRG++   KE + T++ G V  TDK LQQL++M+G NVL+F PVG++ GE+SV DHFDLTC AI+ VLKFGL A  A +AA+LARL P+E A+L AR T RMQ LRH  +F    +R   ADLPN DFR ++  ++LW+L MQ LP+ P SF+ +GPPPVP F G+  F+ SGS  +RM   V G             XXXXXX   ++ +R    KVCF +RD+ +C+WGDSC FRH  G
Sbjct: 1574 LGAGAASGAPRALQLVMLQQDNENLVAKVSALEQSLQQL-LNNQRGGAGSHVVGPHAADGAGXXXXXXXXXXXXXXXXXXXXXXXRFA-KAEFESTASAWRAGRLMWALRGKRGIDVPNKETLQTMMGGTVTGTDKTLQQLRTMSGLNVLDFFPVGNS-GELSVPDHFDLTCAAIVNVLKFGLSATSADNAAALARLLPMEQAMLSARGTLRMQALRHMGDFQGRGSRGTFADLPNDDFREWANAVMLWMLPMQNLPVPPESFERFGPPPVPRFDGINGFSMSGSIALRMFGTV-GXXXXXXXXXXXXXXXXXXXAGGDSKRRS---KVCFEYRDSQTCRWGDSCVFRHATG 1918          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5K433_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K433_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 4.370e-66
Identity = 126/246 (51.22%), Postives = 163/246 (66.26%), Query Frame = 1
Query:  676 WALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSGVTRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRHGRG 1413
            WALR KRG++   KE + T++ G V  TDK LQQL++M+G NVL+F PVG++ GE+SV DHFDLTC AI+ VLKFGL A  A +AA+LARL P+E A+L AR T RMQ LRH  +F    +R   ADLPN DFR ++  ++LW+L MQ  P+ P SF+ +GPPPVP F G+  F+ SGS  +RM   V G             XXXXXX   ++ +R    KVCF +RD+ +C+WGDSC FRH  G
Sbjct:    2 WALRGKRGIDVPNKETLQTMMGGTVTGTDKTLQQLRTMSGLNVLDFFPVGNS-GELSVPDHFDLTCAAIVNVLKFGLSATSADNAAALARLLPMEQAMLSARGTLRMQALRHMGDFQGRGSRGTFADLPNDDFREWASAVMLWMLPMQNFPVPPESFERFGPPPVPRFDGINGFSMSGSIALRMFGTV-GXXXXXXXXXXXXXXXXXXXAGGDSKRRS---KVCFEYRDSQTCRWGDSCVFRHATG 242          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5K7F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7F0_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 2.220e-63
Identity = 115/207 (55.56%), Postives = 148/207 (71.50%), Query Frame = 1
Query:  625 KAEFESRAAAWRVGKVHWALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSG 1245
            KAEFES A+AWR G++ WALR KRG++   KE + T++ G V  TDK LQQL++M+G NVL+F PVG++ GE+SV DHFDLTC AI+ VLKFGL A  A +AA+LARL P+E A+L AR T RMQ LRH  +F    +R   ADLPN DFR ++  ++LW+L MQ LP+ P SF+ +GPPPVP F G+  F+ SGS  +RM   V G
Sbjct:  198 KAEFESTASAWRAGRLMWALRGKRGIDVPNKETLQTMMGGTVTGTDKTLQQLRTMSGLNVLDFFPVGNS-GELSVPDHFDLTCAAIVNVLKFGLSATSADNAAALARLLPMEQAMLSARGTLRMQALRHMGDFQGRGSRGTFADLPNDDFREWANAVMLWMLPMQNLPVPPESFERFGPPPVPRFDGINGFSMSGSIALRMFGTVGG 403          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5K5G9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5G9_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 4.040e-56
Identity = 103/190 (54.21%), Postives = 133/190 (70.00%), Query Frame = 1
Query:  676 WALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSG 1245
            WALR KRG++   KE + T++ G V  T K LQQL++M+G NVL+F PVG++ GE+SV DHFDLTC AI+ VLKFGL A  A +AA+LARL P+E A+L AR T RMQ LRH  +F    +R   ADLPN DFR ++  ++LW+L MQ LP+ P SF+ +GPPPVP F G+  F+ SGS  +RM   V G
Sbjct:    2 WALRGKRGIDVPKKETLQTMMGGTVTGTVKTLQQLRTMSGLNVLDFFPVGNS-GELSVPDHFDLTCAAIVNVLKFGLSATSADNAAALARLLPMEQAMLSARGTLRMQALRHMGDFQGRGSRGTFADLPNDDFREWANAVMLWMLPMQNLPVPPESFERFGPPPVPRFDGINGFSMSGSIALRMFGTVGG 190          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5K9I5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I5_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 7.500e-55
Identity = 123/273 (45.05%), Postives = 166/273 (60.81%), Query Frame = 1
Query:  376 LAAGVGPGGIPAERFALMQQDHENVVAIVSDLRATVSDLSMQNERAAA------------AAAPTATGPAPXATASPAATGLTTMWPSPSNRLAEKAEFESRAAAWRVGKVHWALRAKRGVEFFTKEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYG 1158
            L AG   G   A +  ++QQD+EN+VA VS L  ++  L + N+   A            A A  A G    A A+P +            R   KAEFES A+AWR G++ WALR KRG++   KE + +++ G V  TD+ LQQL++M+G  VL+F PVG++ GE+SV DHFDLTC AI+ VLKFGL A  A +AA+LARL P+E A+L AR T RMQ LRH  +F    +R   ADLPN DFR ++  ++LW+L MQ LP+ P SF+ +G
Sbjct:  134 LGAGAASGAPGALQLVMLQQDNENLVAKVSALEQSLQQL-LNNQGGGAGSHVVGPHAADGAGAEVAVGAGLVAAAAPGSDA-------DRQRRFAKAEFESTASAWRAGRLMWALRGKRGIDVPNKETLQSMMGGTVTGTDRTLQQLRTMSGLIVLDFFPVGNS-GELSVPDHFDLTCAAIVNVLKFGLSATSADNAAALARLLPIEQAMLSARGTLRMQALRHMGDFQGRGSRGTFADLPNDDFREWASAVMLWMLPMQNLPVPPESFERFG 397          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5K174_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K174_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 4.320e-35
Identity = 91/266 (34.21%), Postives = 137/266 (51.50%), Query Frame = 1
Query:  625 KAEFESRAAAWRV--GKVHWALRAKRGVEFFT-KEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSGV---TRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRH 1404
            K E    A  W+    +  W LR +RG E    KE +  L+   V  T  VL Q+++ + F+V +F PVG     +S+AD+FD+ C+A+MR+LKFGL +       SL RL+P+  A+  AR+ FR  L+R+ D F     R  L  LPN DF+ ++  ++ W+     +   P +FD +  PPVP F  + +F   G +L R++    G    T ESR               + + KR    + CF FRD+G+C +GD C+F H
Sbjct:   59 KEEARREATIWQAKYNQTLWVLRGQRGPEPGPQKEDLQGLMGDIVHVTGDVLAQMRAFSSFDVKSFRPVG-VARTLSIADNFDVMCEAVMRLLKFGLDSSTTAGVQSLRRLEPIATAMADARSRFRTTLVRNSDVFPDEYQRAALPRLPNEDFKLWTTAIITWMYPFTKMHYPPDAFDGHTLPPVPEFPNINNFCERGVNLFRLVLSDGGSLPGTGESRGGSGKRKAGQLDRGDSSSRKRVT--RECFQFRDSGTCSFGDKCRFEH 321          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5KZ14_9PHAE (C3H1-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ14_9PHAE)

HSP 1 Score: 145 bits (365), Expect = 4.970e-35
Identity = 86/264 (32.58%), Postives = 137/264 (51.89%), Query Frame = 1
Query:  625 KAEFESRAAAWRV--GKVHWALRAKRGVEFFT-KEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSG-VTRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRH 1404
            K E    A  W+    +  W LR +RG E    KE +  L+   +  T  VL Q+++ + FNV +F P G      S+AD+FD+TC+A+MR+LK GL +     A SL RL+P+  A+  AR++FR  L+R+ D F     R  L  LPN DF+ ++  ++ W+     +   P +FD +  PPVP F+ + +F   G++L R++    G +      R             +++  R+   + C  FRD+G+C +GD C+F H
Sbjct:  102 KEEARREATIWQAKHNQTLWVLRGQRGPEPGPQKEDLQGLMGDIIQLTGDVLAQMRAFSAFNVKSFRPAG-VARTSSIADNFDVTCEAVMRLLKLGLDSSTTAGAQSLQRLEPIATAMADARSSFRTTLVRNCDVFPDEYQRVALPRLPNEDFKLWTTAIITWMYPFTKMHSPPDAFDGHTLPPVPEFSNITNFCERGANLFRLILSEGGSIPGTGGSRGGSGKRKAGQLDRSDSSSRKRVSRECLQFRDSGTCTFGDICRFEH 364          
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Match: A0A6H5KEB0_9PHAE (C3H1-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB0_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 4.860e-34
Identity = 105/338 (31.07%), Postives = 167/338 (49.41%), Query Frame = 1
Query:  409 AERFALMQQDHENVVAIVSDLRATVSDLSMQNERAAAAAAPTATGPAPXATASPAATGLTTMWPSPSNRLAEKAEFESRAAAWRV--GKVHWALRAKRGVEFFT-KEFIGTLLVGRVACTDKVLQQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVAGDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSDFRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLIRMLARVSGV---TRESRKRLAPSSXXXXXXXXAETVKRQADGKVCFAFRDTGSCKWGDSCKFRH 1404
            AE+ A ++Q   N+VA ++++   + +L  ++ +  +     + G      +SP   G       P+   A K E    A  W+    +  W LR +RG E    KE +  L+   V  T  VL Q+++ + F+V +F PVG      S+AD+FD+ C+A+MR+LKFGL +       SL RL+P+  A+  AR+ FR  L+R+ D F     R  L  LPN DF+ ++  ++ W+     +   P +FD +  PPVP F  + +F   G +L R++    G    T ESR               + + KR    + CF FRD+G+C +GD C+F H
Sbjct:  142 AEKNARLEQGQTNMVAQLTEIAGLLKNLRPESGQDGSRGPGGSGGLGLVPASSPWGGGAXXXXSVPARSNA-KEEARREATIWQAKYNQTLWVLRGQRGPEPGPQKEDLQGLMSDIVHVTGDVLAQMRAFSSFDVKSFRPVG-VARTSSIADNFDVMCEAVMRLLKFGLDSSTTAGVQSLRRLEPIATAMADARSRFRTTLVRNSDVFPDEYQRAALPRLPNEDFKLWTTAIITWMYPFTKMHYPPDAFDGHTLPPVPEFPNINNFCERGVNLFRLVLSDGGSLPGTGESRGGSGKRKAGQLDRGDSSSRKRVT--RECFQFRDSGTCSFGDKCRFEH 475          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JCM4_9PHAE3.760e-8146.20C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5L5C2_9PHAE2.390e-7144.89C3H1-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5JN35_9PHAE9.980e-7046.02Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K433_9PHAE4.370e-6651.22C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K7F0_9PHAE2.220e-6355.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5G9_9PHAE4.040e-5654.21Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9I5_9PHAE7.500e-5545.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K174_9PHAE4.320e-3534.21C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KZ14_9PHAE4.970e-3532.58C3H1-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KEB0_9PHAE4.860e-3431.07C3H1-type domain-containing protein n=3 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig82contigP-fluviatile_contig82:271306..272838 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size1423
Cds size1401
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig82.14822.1prot_P-fluviatile_contig82.14822.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig82 271327..272838 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817278.7853923-UTR-P-fluviatile_contig82:271305..2713261622817278.7853923-UTR-P-fluviatile_contig82:271305..271326Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 271306..271326 +
1693571884.5446632-UTR-P-fluviatile_contig82:271305..2713261693571884.5446632-UTR-P-fluviatile_contig82:271305..271326Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 271306..271326 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817278.7974448-CDS-P-fluviatile_contig82:271326..2714671622817278.7974448-CDS-P-fluviatile_contig82:271326..271467Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 271327..271467 +
1693571884.5582008-CDS-P-fluviatile_contig82:271326..2714671693571884.5582008-CDS-P-fluviatile_contig82:271326..271467Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 271327..271467 +
1622817278.8110113-CDS-P-fluviatile_contig82:271563..2718961622817278.8110113-CDS-P-fluviatile_contig82:271563..271896Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 271564..271896 +
1693571884.5700524-CDS-P-fluviatile_contig82:271563..2718961693571884.5700524-CDS-P-fluviatile_contig82:271563..271896Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 271564..271896 +
1622817278.8228886-CDS-P-fluviatile_contig82:271911..2728381622817278.8228886-CDS-P-fluviatile_contig82:271911..272838Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 271912..272838 +
1693571884.5804815-CDS-P-fluviatile_contig82:271911..2728381693571884.5804815-CDS-P-fluviatile_contig82:271911..272838Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 271912..272838 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig82.14822.1

>prot_P-fluviatile_contig82.14822.1 ID=prot_P-fluviatile_contig82.14822.1|Name=mRNA_P-fluviatile_contig82.14822.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=467bp
MEYGGGGVGNDAGGATRGGAGNLEKGPATNPDASPELSEGGDEMSPTQQQ
QQQSGGSSTSMNLAIDAAAAAGSRPQSGANAGLSVNSAPAFPTPAVPGTP
NMAEAAGSSSGASAAAAPLAAGVGPGGIPAERFALMQQDHENVVAIVSDL
RATVSDLSMQNERAAAAAAPTATGPAPAATASPAATGLTTMWPSPSNRLA
EKAEFESRAAAWRVGKVHWALRAKRGVEFFTKEFIGTLLVGRVACTDKVL
QQLKSMAGFNVLNFSPVGHTFGEISVADHFDLTCDAIMRVLKFGLKAEVA
GDAASLARLQPLEAALLRARATFRMQLLRHQDEFASAEARTILADLPNSD
FRAFSENLLLWVLQMQYLPMAPASFDEYGPPPVPAFAGVISFANSGSHLI
RMLARVSGVTRESRKRLAPSSGGGGGGGGAETVKRQADGKVCFAFRDTGS
CKWGDSCKFRHGRGEGD
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mRNA from alignment at P-fluviatile_contig82:271306..272838+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig82.14822.1 ID=mRNA_P-fluviatile_contig82.14822.1|Name=mRNA_P-fluviatile_contig82.14822.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1533bp|location=Sequence derived from alignment at P-fluviatile_contig82:271306..272838+ (Porterinema fluviatile SAG_2381)
GTGGTGAATCTTCGGTTTGACATGGAATACGGAGGCGGAGGCGTAGGAAA CGACGCTGGAGGCGCCACGAGAGGCGGCGCTGGCAACTTGGAGAAAGGTC CGGCCACGAACCCGGATGCTTCTCCCGAGCTGTCGGAGGGTGGCGATGAA ATGTCCCCCACCGTCGCGGAGGCGGTCGCCGCGATGGCAGCGCAAGACCA GTTGCGACTGCAGCAGCAACACCAGCGGCAGCGGCGGCAGCAACAGCAGC AGCAGCAGCAGCAGCAGCAGCAGCAGTCGGGAGGCTCTTCAACTTCAATG AATTTAGCAATTGACGCTGCAGCCGCGGCGGGGTCACGGCCGCAGTCGGG CGCCAACGCTGGTTTGTCTGTAAATTCGGCGCCAGCGTTCCCCACCCCGG CTGTCCCAGGGACGCCTAATATGGCCGAAGCAGCGGGATCCTCGTCTGGA GCGTCGGCAGCAGCAGCGCCGCTGGCGGCGGGAGTTGGTCCGGGGGGGAT CCCTGCCGAGCGTTTCGCCCTCATGCAACAGGACCACGAGAACGTGGTTG CGATCGTGTCCGACCTCCGCGCCACGGTGTCCGACCTCAGCGCCACGGTG CTGCAGATGCAGAACGAGCGCGCGGCGGCCGCGGCTGCTCCGACGGCCAC GGGGCCGGCCCCGGCGGCCACGGCAAGCCCCGCAGCCACGGGGTTGACTA CGATGTGGCCGTCTCCGTCGAATCGACTGGCGGAAAAAGCGGAATTTGAA AGTCGAGCCGCCGCCTGGCGTGTGGGGAAGGTGCACTGGGCCCTCCGCGC AAAACGTGGAGTCGAGTTCTTCACCAAGGAGTTCATCGGGACTTTGCTGG TTGGCCGCGTCGCGTGCACTGACAAGGTGCTACAACAGCTGAAGTCCATG GCGGGATTCAACGTGCTCAATTTCTCCCCGGTTGGCCATACCTTCGGAGA AATTTCAGTGGCGGATCATTTCGACCTTACTTGCGACGCCATTATGAGGG TGTTGAAGTTTGGCTTGAAGGCCGAAGTGGCGGGCGATGCCGCGTCCTTG GCGCGGCTGCAGCCCCTGGAAGCGGCGTTGTTGCGGGCCAGGGCCACGTT CCGGATGCAGCTCCTGAGGCACCAAGACGAGTTCGCCTCCGCGGAGGCGC GGACCATTCTCGCCGACCTGCCCAATTCTGATTTTCGGGCGTTCTCAGAA AATTTGTTGCTCTGGGTTCTTCAGATGCAGTACCTTCCCATGGCGCCCGC CTCATTCGACGAGTACGGCCCTCCCCCGGTGCCGGCTTTCGCGGGTGTGA TTAGTTTCGCGAACTCCGGCAGTCATCTCATCCGCATGCTCGCCAGGGTC AGTGGAGTTACGAGGGAGTCGCGCAAACGATTGGCTCCTTCCTCTGGCGG AGGGGGAGGGGGGGGTGGAGCGGAAACAGTGAAACGTCAGGCGGATGGAA AGGTGTGTTTTGCCTTCCGCGACACGGGCTCCTGCAAGTGGGGAGACAGT TGCAAGTTCCGTCACGGTCGAGGGGAAGGTGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig82:271306..272838+

>mRNA_P-fluviatile_contig82.14822.1 ID=mRNA_P-fluviatile_contig82.14822.1|Name=mRNA_P-fluviatile_contig82.14822.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2802bp|location=Sequence derived from alignment at P-fluviatile_contig82:271306..272838+ (Porterinema fluviatile SAG_2381)
ATGGAATACGGAGGCGGAGGCGTAGGAAACGACGCTGGAGGCGCCACGAG
AGGCGGCGCTGGCAACTTGGAGAAAGGTCCGGCCACGAACCCGGATGCTT
CTCCCGAGCTGTCGGAGGGTGGCGATGAAATGTCCCCCACCATGGAATAC
GGAGGCGGAGGCGTAGGAAACGACGCTGGAGGCGCCACGAGAGGCGGCGC
TGGCAACTTGGAGAAAGGTCCGGCCACGAACCCGGATGCTTCTCCCGAGC
TGTCGGAGGGTGGCGATGAAATGTCCCCCACCCAGCAGCAGCAGCAGCAG
TCGGGAGGCTCTTCAACTTCAATGAATTTAGCAATTGACGCTGCAGCCGC
GGCGGGGTCACGGCCGCAGTCGGGCGCCAACGCTGGTTTGTCTGTAAATT
CGGCGCCAGCGTTCCCCACCCCGGCTGTCCCAGGGACGCCTAATATGGCC
GAAGCAGCGGGATCCTCGTCTGGAGCGTCGGCAGCAGCAGCGCCGCTGGC
GGCGGGAGTTGGTCCGGGGGGGATCCCTGCCGAGCGTTTCGCCCTCATGC
AACAGGACCACGAGAACGTGGTTGCGATCGTGTCCGACCTCCGCGCCACG
GTGTCCGACCTCAGCCAGCAGCAGCAGCAGCAGTCGGGAGGCTCTTCAAC
TTCAATGAATTTAGCAATTGACGCTGCAGCCGCGGCGGGGTCACGGCCGC
AGTCGGGCGCCAACGCTGGTTTGTCTGTAAATTCGGCGCCAGCGTTCCCC
ACCCCGGCTGTCCCAGGGACGCCTAATATGGCCGAAGCAGCGGGATCCTC
GTCTGGAGCGTCGGCAGCAGCAGCGCCGCTGGCGGCGGGAGTTGGTCCGG
GGGGGATCCCTGCCGAGCGTTTCGCCCTCATGCAACAGGACCACGAGAAC
GTGGTTGCGATCGTGTCCGACCTCCGCGCCACGGTGTCCGACCTCAGCAT
GCAGAACGAGCGCGCGGCGGCCGCGGCTGCTCCGACGGCCACGGGGCCGG
CCCCGGCGGCCACGGCAAGCCCCGCAGCCACGGGGTTGACTACGATGTGG
CCGTCTCCGTCGAATCGACTGGCGGAAAAAGCGGAATTTGAAAGTCGAGC
CGCCGCCTGGCGTGTGGGGAAGGTGCACTGGGCCCTCCGCGCAAAACGTG
GAGTCGAGTTCTTCACCAAGGAGTTCATCGGGACTTTGCTGGTTGGCCGC
GTCGCGTGCACTGACAAGGTGCTACAACAGCTGAAGTCCATGGCGGGATT
CAACGTGCTCAATTTCTCCCCGGTTGGCCATACCTTCGGAGAAATTTCAG
TGGCGGATCATTTCGACCTTACTTGCGACGCCATTATGAGGGTGTTGAAG
TTTGGCTTGAAGGCCGAAGTGGCGGGCGATGCCGCGTCCTTGGCGCGGCT
GCAGCCCCTGGAAGCGGCGTTGTTGCGGGCCAGGGCCACGTTCCGGATGC
AGCTCCTGAGGCACCAAGACGAGTTCGCCTCCGCGGAGGCGCGGACCATT
CTCGCCGACCTGCCCAATTCTGATTTTCGGGCGTTCTCAGAAAATTTGTT
GCTCTGGGTTCTTCAGATGCAGTACCTTCCCATGGCGCCCGCCTCATTCG
ACGAGTACGGCCCTCCCCCGGTGCCGGCTTTCGCGGGTGTGATTAGTTTC
GCGAACTCCGGCAGTCATCTCATCCGCATGCTCGCCAGGGTCAGTGGAGT
TACGAGGGAGTCGCGCAAACGATTGGCTCCTTCCTCTGGCGGAGGGGGAG
GGGGGGGTGGAGCGGAAACAGTGAAACGTCAGGCGGATGGAAAGGTGTGT
TTTGCCTTCCGCGACACGGGCTCCTGCAAGTGGGGAGACAGTTGCAAGTT
CCGTCACGGTCGAGGGGAAGGTGACATGCAGAACGAGCGCGCGGCGGCCG
CGGCTGCTCCGACGGCCACGGGGCCGGCCCCGGCGGCCACGGCAAGCCCC
GCAGCCACGGGGTTGACTACGATGTGGCCGTCTCCGTCGAATCGACTGGC
GGAAAAAGCGGAATTTGAAAGTCGAGCCGCCGCCTGGCGTGTGGGGAAGG
TGCACTGGGCCCTCCGCGCAAAACGTGGAGTCGAGTTCTTCACCAAGGAG
TTCATCGGGACTTTGCTGGTTGGCCGCGTCGCGTGCACTGACAAGGTGCT
ACAACAGCTGAAGTCCATGGCGGGATTCAACGTGCTCAATTTCTCCCCGG
TTGGCCATACCTTCGGAGAAATTTCAGTGGCGGATCATTTCGACCTTACT
TGCGACGCCATTATGAGGGTGTTGAAGTTTGGCTTGAAGGCCGAAGTGGC
GGGCGATGCCGCGTCCTTGGCGCGGCTGCAGCCCCTGGAAGCGGCGTTGT
TGCGGGCCAGGGCCACGTTCCGGATGCAGCTCCTGAGGCACCAAGACGAG
TTCGCCTCCGCGGAGGCGCGGACCATTCTCGCCGACCTGCCCAATTCTGA
TTTTCGGGCGTTCTCAGAAAATTTGTTGCTCTGGGTTCTTCAGATGCAGT
ACCTTCCCATGGCGCCCGCCTCATTCGACGAGTACGGCCCTCCCCCGGTG
CCGGCTTTCGCGGGTGTGATTAGTTTCGCGAACTCCGGCAGTCATCTCAT
CCGCATGCTCGCCAGGGTCAGTGGAGTTACGAGGGAGTCGCGCAAACGAT
TGGCTCCTTCCTCTGGCGGAGGGGGAGGGGGGGGTGGAGCGGAAACAGTG
AAACGTCAGGCGGATGGAAAGGTGTGTTTTGCCTTCCGCGACACGGGCTC
CTGCAAGTGGGGAGACAGTTGCAAGTTCCGTCACGGTCGAGGGGAAGGTG
AC
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