mRNA_P-fluviatile_contig82.14804.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig82.14804.1
Unique NamemRNA_P-fluviatile_contig82.14804.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: D7FPB2_ECTSI (Proteasome subunit alpha type n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB2_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 3.980e-120
Identity = 178/184 (96.74%), Postives = 182/184 (98.91%), Query Frame = 2 
Query:  149 MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK--IDPAGHYFPYKATSSGSKEQEAMNWLEKKVE 694
            MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGK+TSVMVTQKKVPDRLIDPTSVTNIFKIT+KIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFK  +DPAGHYFPYKATSSGSKEQEAMNWLEKKV+
Sbjct:    1 MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKETSVMVTQKKVPDRLIDPTSVTNIFKITDKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKGVVDPAGHYFPYKATSSGSKEQEAMNWLEKKVD 184
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: A0A835YUN1_9STRA (Proteasome subunit alpha type n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUN1_9STRA)

HSP 1 Score: 308 bits (789), Expect = 6.730e-101
Identity = 144/184 (78.26%), Postives = 165/184 (89.67%), Query Frame = 2 
Query:  149 MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKVELI 700
            MSRDSNYDH IT+FSPQGRLYQIEYAFKAA   GLTSV+VRGKD  V+VTQKKVPDRLIDP SVTN+F++T+++GCLMTGM AD+R  VQRLRYEAHEFRFKYGYD P   LARR ADI QVYTQQAS+RALACVA+L+AVDDEKGPQ+FK+DPAGH+FPYKA +SG+KEQEA+NW EKKV+ +
Sbjct:    1 MSRDSNYDHHITIFSPQGRLYQIEYAFKAASSSGLTSVAVRGKDACVVVTQKKVPDRLIDPASVTNLFRVTDRVGCLMTGMTADARASVQRLRYEAHEFRFKYGYDVPVGTLARRFADICQVYTQQASLRALACVALLVAVDDEKGPQVFKVDPAGHFFPYKAAASGAKEQEAVNWFEKKVDTL 184
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: A0A7S2XVL7_9STRA (Proteasome subunit alpha type n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVL7_9STRA)

HSP 1 Score: 275 bits (702), Expect = 1.020e-87
Identity = 129/180 (71.67%), Postives = 155/180 (86.11%), Query Frame = 2 
Query:  152 SRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKV 691
            +RDSNYD  I++FSPQGRLYQIEYA KAA   GLTS++VRG +T  +VTQKKVPDRLIDP SVT+++++  KIGCLMTGM AD+RV+VQRLRYEA E+RFK+GYD P HVLARR+AD++QVYTQ A +RA+A   +L  VDDEKGP LF+IDPAGHY P+KATS+G+KEQEAMNWLEKKV
Sbjct:    3 ARDSNYDRYISIFSPQGRLYQIEYAKKAANSSGLTSIAVRGAETCALVTQKKVPDRLIDPESVTSLYQVNNKIGCLMTGMTADARVVVQRLRYEAAEYRFKHGYDVPVHVLARRLADLSQVYTQHAGIRAMAATTILAGVDDEKGPMLFRIDPAGHYLPFKATSAGAKEQEAMNWLEKKV 182
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: A0A7S2WQZ1_9STRA (Proteasome subunit alpha type n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WQZ1_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.880e-87
Identity = 132/181 (72.93%), Postives = 154/181 (85.08%), Query Frame = 2 
Query:  152 SRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKVE 694
            SRDSNYD  IT+FSPQGRLYQ+EYA KAA   GLT+V+VRG ++  MV QKKVPDRLIDP+SVT +++ITEKIGCLMTG+ AD RV V RLR EAHEF+F YGYD P HVLA+RIADI+QVYTQ+AS+R LAC  +L +VDDEKGPQLFKID AG +FPYKAT++GSK  EAMNWLEK+VE
Sbjct:    3 SRDSNYDRHITIFSPQGRLYQVEYAIKAAENTGLTAVAVRGANSCAMVIQKKVPDRLIDPSSVTYVYQITEKIGCLMTGLTADCRVQVTRLRQEAHEFKFNYGYDMPVHVLAKRIADISQVYTQEASLRMLACNVILSSVDDEKGPQLFKIDSAGSFFPYKATAAGSKAAEAMNWLEKRVE 183
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: K8YP06_NANGC (Proteasome subunit alpha type n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YP06_NANGC)

HSP 1 Score: 270 bits (689), Expect = 8.420e-86
Identity = 131/179 (73.18%), Postives = 152/179 (84.92%), Query Frame = 2 
Query:  155 RDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKV 691
            RDS YDH IT+FSPQGRLYQIEYAFKAA   GLTSV+VRGK+   +VTQKKVPDRLIDP+SV+NI++IT+K+G +MTGM  DSR  V RLR EAHEFRFKYGYD P HVLA+RIADIAQ    QASMRALA V ML+ VDDE+GPQL+K+DPAGH+FP+KAT++G K+ EA NWLEKKV
Sbjct:    4 RDSQYDHHITIFSPQGRLYQIEYAFKAANSEGLTSVAVRGKECVAVVTQKKVPDRLIDPSSVSNIYQITDKVGAVMTGMTTDSRAQVTRLRQEAHEFRFKYGYDIPVHVLAKRIADIAQ----QASMRALATVCMLVGVDDERGPQLYKVDPAGHFFPFKATAAGVKQDEATNWLEKKV 178
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: A0A4D9D8R2_9STRA (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8R2_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.790e-85
Identity = 137/189 (72.49%), Postives = 159/189 (84.13%), Query Frame = 2 
Query:  131 YCAS--VTMSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKV 691
            YC    +   RDS YDH IT+FSPQGRLYQIEYAFKAA   GLTSV+VRGK+   +VTQKKVPDRLIDP+SV+NI++IT+K+G +MTGM  DSR  V RLR EAHEFRFKYGYD P HVLA+RIADIAQVYTQQASMRALA V ML+ VDDE+GPQL+K+DPAGH+FP+KAT++G K+ EA NWLEKKV
Sbjct:   19 YCLPLFIMSGRDSQYDHHITIFSPQGRLYQIEYAFKAANSEGLTSVAVRGKECVAVVTQKKVPDRLIDPSSVSNIYQITDKLGAVMTGMTTDSRAQVTRLRQEAHEFRFKYGYDIPVHVLAKRIADIAQVYTQQASMRALATVCMLVGVDDERGPQLYKVDPAGHFFPFKATAAGVKQDEATNWLEKKV 207
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: A0A7S2C157_9STRA (Proteasome subunit alpha type n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C157_9STRA)

HSP 1 Score: 264 bits (674), Expect = 2.010e-83
Identity = 125/182 (68.68%), Postives = 149/182 (81.87%), Query Frame = 2 
Query:  143 VTMSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKK 688
              MSRD+NYD  IT+FSPQGRLYQ+EYA KAA   GLT+V+VRG D+  +V QKKVPDRLIDPTSVT +++IT KIGCLMTG+ AD RV V R+R EAH+++F YGYD P HVLA+RIADI QVYTQ+AS+R LAC  ++ +VDDE GPQ+FKID AG YFP+KAT+SGSK  EA NWLEKK
Sbjct:    7 TNMSRDANYDRHITIFSPQGRLYQVEYALKAADSTGLTAVAVRGADSCALVIQKKVPDRLIDPTSVTYVYEITPKIGCLMTGLTADCRVQVTRMRQEAHQYKFDYGYDMPVHVLAKRIADICQVYTQEASLRMLACNVIIASVDDELGPQIFKIDAAGSYFPFKATASGSKHMEATNWLEKK 188
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: F0W2W5_9STRA (Proteasome subunit alpha type n=2 Tax=Albugo TaxID=65356 RepID=F0W2W5_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.990e-81
Identity = 124/176 (70.45%), Postives = 148/176 (84.09%), Query Frame = 2 
Query:  167 YDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKVE 694
            YD  IT+FSP+GRLYQIEYAFKA  G GLTSV+VRG D+ V +TQKKV D+LIDP SVT+IF+IT +IGCLMTGM AD++  VQRLRYEA+EF FK+GY  P +VLA+R ADIAQVYTQ ASMRA   V MLI +DDEKGPQL+KIDPAGH++ YKATS+G  EQ+A+N+LEKKV+
Sbjct:    6 YDRHITIFSPEGRLYQIEYAFKAVQGSGLTSVAVRGMDSCVFITQKKVQDKLIDPESVTHIFQITAEIGCLMTGMYADAKAQVQRLRYEANEFAFKFGYSVPCYVLAKRAADIAQVYTQHASMRAFGVVTMLIGIDDEKGPQLYKIDPAGHFWGYKATSAGKNEQQALNYLEKKVK 181
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: H3G9M2_PHYRM (Proteasome subunit alpha type n=26 Tax=Oomycota TaxID=4762 RepID=H3G9M2_PHYRM)

HSP 1 Score: 258 bits (659), Expect = 2.810e-81
Identity = 123/176 (69.89%), Postives = 150/176 (85.23%), Query Frame = 2 
Query:  167 YDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKVE 694
            YD  IT+FSP+GRLYQIEYAF+AA    LTSV+VRGKD++V VTQKKV D+LI+P SVTN+F+IT +IGCLMTG+ ADS+  VQRLR+EAHEF  K+GY  P HVLA+RIAD+AQVYTQ ASMRA   + ML++VD+EKGPQLFKIDPAGH++ YKATS+G KEQEA N+LEKK++
Sbjct:    6 YDRHITIFSPEGRLYQIEYAFRAAKESTLTSVAVRGKDSAVFVTQKKVQDKLIEPDSVTNVFQITPEIGCLMTGLYADSKAQVQRLRFEAHEFENKFGYKIPCHVLAKRIADVAQVYTQHASMRAFGVITMLVSVDEEKGPQLFKIDPAGHFWGYKATSAGVKEQEAQNYLEKKIK 181
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BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Match: A0A7R9WI81_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9WI81_9STRA)

HSP 1 Score: 258 bits (658), Expect = 4.690e-81
Identity = 126/183 (68.85%), Postives = 152/183 (83.06%), Query Frame = 2 
Query:  149 MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGP-GLTSVSVRGKDTSVMVTQKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFRFKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLFKIDPAGHYFPYKATSSGSKEQEAMNWLEKKVE 694
            MSRDSNYDH I++FSPQGRLYQ+EYAFKAA    GLT V+VRGKD++ +VTQKKVPDRL+DP SV++I+ IT +IGCL TGM+AD +  VQR RYEA +F+FKYGY  P   LA+RIAD+AQVYTQ ASMR LA V +LI VDDEKGPQ+FK+D AGHY P+KA +SG KEQEA N+LEK+V+
Sbjct:    1 MSRDSNYDHHISIFSPQGRLYQMEYAFKAASSASGLTGVAVRGKDSAAVVTQKKVPDRLMDPKSVSHIWNITPQIGCLCTGMLADCKAQVQRARYEAADFQFKYGYPIPVAALAKRIADVAQVYTQSASMRPLASVCLLIGVDDEKGPQVFKVDCAGHYLPFKAAASGQKEQEAANFLEKRVK 183
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14804.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPB2_ECTSI3.980e-12096.74Proteasome subunit alpha type n=1 Tax=Ectocarpus s... [more]
A0A835YUN1_9STRA6.730e-10178.26Proteasome subunit alpha type n=1 Tax=Tribonema mi... [more]
A0A7S2XVL7_9STRA1.020e-8771.67Proteasome subunit alpha type n=1 Tax=Fibrocapsa j... [more]
A0A7S2WQZ1_9STRA2.880e-8772.93Proteasome subunit alpha type n=2 Tax=Rhizochromul... [more]
K8YP06_NANGC8.420e-8673.18Proteasome subunit alpha type n=2 Tax=Nannochlorop... [more]
A0A4D9D8R2_9STRA5.790e-8572.49PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A7S2C157_9STRA2.010e-8368.68Proteasome subunit alpha type n=1 Tax=Dictyocha sp... [more]
F0W2W5_9STRA1.990e-8170.45Proteasome subunit alpha type n=2 Tax=Albugo TaxID... [more]
H3G9M2_PHYRM2.810e-8169.89Proteasome subunit alpha type n=26 Tax=Oomycota Ta... [more]
A0A7R9WI81_9STRA4.690e-8168.85Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig82contigP-fluviatile_contig82:92855..99141 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score357.5
Seed ortholog evalue7.3e-96
Seed eggNOG ortholog2880.D7FPB2
Preferred namePSMA6
KEGG koko:K02730
KEGG Pathwayko03050,map03050
KEGG ModuleM00337,M00340
GOsGO:0000502,GO:0000932,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0003824,GO:0004175,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005773,GO:0005774,GO:0005829,GO:0005839,GO:0005840,GO:0005844,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007088,GO:0007275,GO:0007346,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009888,GO:0009889,GO:0009896,GO:0009987,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010498,GO:0010499,GO:0010556,GO:0010564,GO:0010638,GO:0010965,GO:0012505,GO:0014706,GO:0016020,GO:0016363,GO:0016579,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0019773,GO:0019941,GO:0022626,GO:0030016,GO:0030017,GO:0030071,GO:0030163,GO:0031090,GO:0031323,GO:0031326,GO:0031331,GO:0031347,GO:0031597,GO:0031974,GO:0031981,GO:0032101,GO:0032270,GO:0032436,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034399,GO:0034515,GO:0035639,GO:0035770,GO:0036211,GO:0036464,GO:0042175,GO:0042221,GO:0042788,GO:0043161,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043292,GO:0043412,GO:0043632,GO:0043687,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044449,GO:0044464,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048731,GO:0048856,GO:0050727,GO:0050789,GO:0050794,GO:0050896,GO:0051059,GO:0051090,GO:0051091,GO:0051092,GO:0051128,GO:0051130,GO:0051171,GO:0051247,GO:0051252,GO:0051603,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0060255,GO:0060537,GO:0060538,GO:0061061,GO:0062033,GO:0065007,GO:0065009,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0080134,GO:0090068,GO:0097159,GO:0098588,GO:0098805,GO:0099080,GO:0099081,GO:0099512,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903052,GO:1903364,GO:1903506,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:1990904,GO:2000112,GO:2001141,GO:2001252
EggNOG free text desc.threonine-type endopeptidase activity
EggNOG OGsCOG0638@1,KOG0182@2759
EC3.4.25.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko03051
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleophile aminohydrolases, N-terminal
Ec32 orthologEc-15_004060.2
Exons7
Model size1189
Cds size1041
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig82.14804.1prot_P-fluviatile_contig82.14804.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig82 93003..99141 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817280.1924825-UTR-P-fluviatile_contig82:92854..930021622817280.1924825-UTR-P-fluviatile_contig82:92854..93002Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 92855..93002 +
1693571893.428614-UTR-P-fluviatile_contig82:92854..930021693571893.428614-UTR-P-fluviatile_contig82:92854..93002Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 92855..93002 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817280.2064295-CDS-P-fluviatile_contig82:93002..930721622817280.2064295-CDS-P-fluviatile_contig82:93002..93072Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 93003..93072 +
1693571893.451518-CDS-P-fluviatile_contig82:93002..930721693571893.451518-CDS-P-fluviatile_contig82:93002..93072Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 93003..93072 +
1622817280.2196443-CDS-P-fluviatile_contig82:96019..961141622817280.2196443-CDS-P-fluviatile_contig82:96019..96114Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 96020..96114 +
1693571893.4610279-CDS-P-fluviatile_contig82:96019..961141693571893.4610279-CDS-P-fluviatile_contig82:96019..96114Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 96020..96114 +
1622817280.2313242-CDS-P-fluviatile_contig82:96590..966721622817280.2313242-CDS-P-fluviatile_contig82:96590..96672Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 96591..96672 +
1693571893.4699814-CDS-P-fluviatile_contig82:96590..966721693571893.4699814-CDS-P-fluviatile_contig82:96590..96672Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 96591..96672 +
1622817280.244615-CDS-P-fluviatile_contig82:97262..973781622817280.244615-CDS-P-fluviatile_contig82:97262..97378Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 97263..97378 +
1693571893.4793239-CDS-P-fluviatile_contig82:97262..973781693571893.4793239-CDS-P-fluviatile_contig82:97262..97378Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 97263..97378 +
1622817280.2573986-CDS-P-fluviatile_contig82:97840..979301622817280.2573986-CDS-P-fluviatile_contig82:97840..97930Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 97841..97930 +
1693571893.488514-CDS-P-fluviatile_contig82:97840..979301693571893.488514-CDS-P-fluviatile_contig82:97840..97930Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 97841..97930 +
1622817280.27191-CDS-P-fluviatile_contig82:98506..987811622817280.27191-CDS-P-fluviatile_contig82:98506..98781Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 98507..98781 +
1693571893.8803673-CDS-P-fluviatile_contig82:98506..987811693571893.8803673-CDS-P-fluviatile_contig82:98506..98781Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 98507..98781 +
1622817280.2842135-CDS-P-fluviatile_contig82:98828..991411622817280.2842135-CDS-P-fluviatile_contig82:98828..99141Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 98829..99141 +
1693571893.8974633-CDS-P-fluviatile_contig82:98828..991411693571893.8974633-CDS-P-fluviatile_contig82:98828..99141Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 98829..99141 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig82.14804.1

>prot_P-fluviatile_contig82.14804.1 ID=prot_P-fluviatile_contig82.14804.1|Name=mRNA_P-fluviatile_contig82.14804.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=347bp
MSRDSNYDHQITVFSPQGRLYQIEYAFKAAMGPGLTSVSVRGKDTSVMVT
QKKVPDRLIDPTSVTNIFKITEKIGCLMTGMIADSRVLVQRLRYEAHEFR
FKYGYDCPAHVLARRIADIAQVYTQQASMRALACVAMLIAVDDEKGPQLF
KIDPAGHYFPYKATSSGSKEQEAMNWLEKKVELISCIRAFTFISKSLLLY
RVLFRSSSPKVRLQSQRTICSEALVPVFIFCRLLAPYAFRMRSGWTGTGH
GFAESLHVVTLGCGVGYILPGETHTHTLLSLFEARPGVEKKINGNNINDL
TCFPCAAKHTQAVQNSGGMRAAQPSLGGPRRECLLARAKRREGATGV
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mRNA from alignment at P-fluviatile_contig82:92855..99141+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig82.14804.1 ID=mRNA_P-fluviatile_contig82.14804.1|Name=mRNA_P-fluviatile_contig82.14804.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6287bp|location=Sequence derived from alignment at P-fluviatile_contig82:92855..99141+ (Porterinema fluviatile SAG_2381)
AAGAAAGCCAGGGCTGATTGCATACCAGTTGCCCTAAAGAGTCGGGCGAT
TTGAGACGGGAATCTGGTCTGATATTTTGAGGGAACATCTGCAGAGAGGC
AAACGCAGCGCAGGCATCGGCGACAGTTAGTACTGTGCCAGCGTCACCAT
GTCTAGGGACTCGAACTACGACCACCAGATCACGGTCTTCTCTCCTCAGG
GGCGACTGTATCAAATAGGTGAGGCAATTCTCTCAAGGAAGCGCTGCAAG
TACTTTTGTGTGTGCAAGTCTCAAGATACGACGTGGGCCTCGGGCCTGCA
TGCTGCTGTGGCGGCGGGAACAGCCGAGCGAGTGTGGTATGTGATTGCTC
TCATGCCAGCATTGCTTCAAATGTTGCACTGGTTTCGACTTGTGCATACC
GTTCAACTACTGCTGTGTGAGTTGCAGAAGCGCACACACGTAGCCCACGC
CCTTTCTGTCAAACGGTGAGACTGCTGTTCCGGTTACCGAGCGAGGCAGC
TGGAAGACGGTGGGAAGGCATCGACCTACATCTGCCTTGCTCTCAAATCG
CAATGAAGGAAATCAGACACCTACGCAACCTGAGCATTTCAGGCTATCGG
ACTCCGCAATTCTGCGAACAGTAGCTGCCACAGCAGATGTGCAGGAGAGA
TTGAACGCACTAAGGCGGTTGTGTGTTCGGCAGGCTCCAGCCCCGAGATG
GTGCCCGCCGAATAAATCGTCCTGCAGAGCCACGAGCGTCGCTTGCGAAA
AGTGCTGTCACTGTGTTCAGATGCGTGGCCAATACTCTTCAGGGTATTGA
CATCATGGAACCAGTGTTATCGCAGGCCCTCGTCGGGCTGTTGTCACGCT
ACGGGTGTTTACGTAGCGGCGCGCCGTTCCACATGCCCAGCGGATCGCCA
TTCCGGCCCGTTTGGCAGGCCCGTGTTCTGAGGTCGTTCTGTCACGGCAC
CGGCGCAGGGACTCGCCGTCCCACATGTCTGGCTTATCGCCAATCCGCGT
TTAGCGGGCCCGTTTCGTGCAGAGGTCGTTACGTCACGGTACCGGTGCAG
AGGCTCGCTCTCCCACATGTCCGGCGGGTCGTCAATCCGCGTTTGGCGGG
GCCGTCTCGTGCACAGGTAGAGCACGCTCGCAGCCCGTGTGAGGGGGAGG
GGGGGTGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTGACCTC
GCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCGGACCAGG
CTCTCACACCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGAGTCGCAT
GAAGGGTGCGCTGCATCCTGCTAAGGGTGTTCGACATCTTGTGCTTACTT
CCTTGCATACGGATGACTGCGTATGACTTAATTTATTTTCTGGTGCTTTC
ACTTCCAGAGACAGTTGCAAGCACTGTGTAACTGCCTCGAGGGTGCTTGA
GCATTTTAACACAATGTGGTGCAATCATCCCCCTTGCGCGGAGTGAGGGT
TTTCCACCCCGCACATGATCTTCTCGACCACCATTATTGTTACCGCCAAA
AAAAACAGAGGAAAAAAAAAGCACGGTAAACTGGTTGCCGAGTCCACGGA
GTGAATTGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAATC
CCGATGGCAAACACCGAGGTGAGAGCCAGGGGGGGGAAGGAGCCCGTGTG
AGGGGGGGGCACGATAGATGAAGAATGCACTCATCGGCGTTGGATGCTAG
AAAAGTATTTTTGTGCGTCCCCATGCGTCCCGCGGGAAGCGCGGAAACTC
GACGGGAACAGCACAGAAGCCGCAACATCAACAACGACAAACGAGTCAAC
CAAGAAACAGCAGAAGCTGCAGCAGCTGCAACACCTACTACAACGAGAAT
GCAACACACAGACGAACGCCGACGAAGCTGGCGGCGCTCAAAAGTGGCTA
CCTAACGGCACACACAACAACTGCAAACGCCGGTGACAAACCGAAGCCGC
TGTGCGAGTGTCGACGCTGCTGCTTGCTGCACACACAACGGGGGCGGTGG
GTTCAAGCCGACCGAATCGCGTATCGTTCATGATTTCTCTCACTCCAAAA
GAAAACAGGACGATCTCGTCTTTCGGTTAGCCGGCGTTTATGTTGATGTC
ATCGATTAACCTCCTCATTTTCATCCGTGTCTGGTATTTTTCACGCCACC
CCCTTACCCCCCTGTCCCCCTCTATCGAGGAGAAGTTTGAGGATCGAAAT
CGGTTTGATTTTTGTAGGCCAAGGAGTCTCGATGATTTTGCAATCAAAGC
TGGGCAGCCGCCACATGTGTCCCACGAACTGTGACACTTGTATTTCGCAG
CGGTCACGATGCAGGCAGGAATTCGATCGGCTGTTAGCCTTGCAATTCTG
CACTCATCGTAGCTGGCGGCGTGGGCGCCGGAGGCCGCTCCCTATGCCGC
CGCCAGCGTCGCTGTCGGGGCTTCACGTATCGCAGCCGTTGCCGGCCTAT
GTCGCAGCAGTGATGACAGCTCTCGCACCACGAACGACGATTCAGTGCTG
CAGCAGTACGTACGTGTGTTACGCTCCGCAGCTGCGATGTATTTTAGCCG
TCGTGTTTCCTGCTGGGGTGGATGTTTTCAATCGCGGTGCTGCATCACCG
TTCCGCGCTAAAGAAATGACAGGGCGGTATTGCCATGCTTCGAGCAGCCG
CGCAGCAGCAGCAGCCCTAGCGCTAAAGGCACACGTAAGCGCAATTGCAA
TTGCAATTGCGCTCGACCGGCACGTTCATAGCACAGAGAATGTTGGACCA
AACAGTACGCTTGAGTAGCTGGTTCACCAGTCGACTTCTCTCTTATGCCG
TTGTTTTTTGAGCCGCATAGGCTCAAGTGGGTTTTCCCTCGAACAATATC
CGCTTCATTTTCCCCCATCTGTTGTGGCTCTCTCTCGGTCACTCTCGCCC
TATCTCTCTCTCCCTCTCTCTCCctCTCTCTCTCTCTCGCTCTCGCTCTG
TCTCTCTCTCGCTCTGTCTCTCTCTCGCTCTGTCTCTCTCTCGCGCTGTC
TCTCTCTTCTCGCGATCTCAACTCTACTGATCATTTATTTCCGCTCGAAC
CAGACTATATTCCTTTGGCTCCCTCGCACTTTTTATCGTTTTACGCCCTC
CCGAAACCGGAGCAGAGTATGCCTTCAAGGCGGCGATGGGGCCAGGATTG
ACGTCGGTGTCAGTGCGGGGGAAGGACACGAGCGTCATGGTCACCCAGAA
AAAAGTTCCGGTGAGAGTCCGCGTCACACCTACAGGGCCAGACGCGTACC
GCATGCACGAACACACCGCACGTGCGCTCTTGAACGTGGTCTGCTTAAAT
GCGGATCATTCGATCAAGCGGTTGCCAAGTACCTGTCAACTCATTTTACT
TCATTTTTCTGCGTAACAAGTACAAATATCGTCCGATTCTCGTGAGCTCG
GTGATTTCACCTCCAAATTAACGTTCGCTGCGCCTGCCGCCGTCTCTCTA
GGAAGGCGTACCCAGCGTAGGTCAATTCGTGAATTGCTTGCTGCCTACGC
ATGATACGTGCGCCTCGATGACACTCAGTTCCCATGTCTTATGCTGTTAC
TTGTGGTCTCAAACTCTGAGCTGGCCTTGGCAACAGTGCTGGGAACTACC
CCTGTTCTCTCCCCGCTCACTCGTTCCCCTATGTTTGTGCGCTCGAAAAC
CGGATACAACAAACTTGGTGATCATCCATCATGCAGGACCGACTTATCGA
CCCCACCTCGGTAACCAACATCTTCAAGATCACCGAAAAAATTGGCTGCC
TAATGACCGGCATGATCGGTAAGTGACACTGTCTCTGGACGGAGCTTGTT
TTCAGGTCTGGAAGTGGCACGTGTTCGACCAGGAAAGGGTTTCAGGCCTG
TTGGTGTCACCGTTGGTGTGGCTAGTATGATCGGTGAGGGACATGCCTGT
GGAGGAAGAACGGCCTCAGGCCTGTTCATGAGACCATTGTTGGTTCTTGG
ACGAAGATAGCCAGGTTAGTTGATTGTTGCCACCACACTGATGTGACTAG
CATGATGGACGCGTGAATCGCCCGAGGATTACCGAGTGAGTGACCCGAGC
TTGAGGGAGGGTTGGACAAGCTTTCCCCGACCTTCCCTCCCCCGTCAAGA
CGTTGCACACCGCATTATTCGACCGCTGCTGCTATGACTGGACTGTGGCC
CCACCGTAGGCTGCCCGAAATTCCCCGTCGGGGATCGGGCGTTTTGGCTC
CGGAGTTTTTCCTTCTTCGGTTCGCTCGCTTGCCGTCACTCGTCAACCCT
CTGACGTTGCTTCTTACAAGCCTCCCGCGTCATATTTTTTGACCCCGGGC
CGGTGAACTTCCGCACCCTTCTTTTTTCACCCGACCGCGTGTCTCCCGCC
GTCGTTAGCCGACTCGCGGGTGCTGGTGCAGCGGTTGCGGTACGAGGCCC
ACGAGTTCCGGTTCAAGTACGGCTACGACTGCCCGGCGCACGTCCTGGCC
CGCCGTATCGCCGACATTGCGCAGGTGATTGTGTTTGCACGTGTGTATGC
TGCTGTTTTTTGCAAAGACCATGGCATCCGGCTGGTAGTCCGTTTGCATG
TATGCGGTATTGGATTCTTGGTGCGGGTTTTGCGCTTCTGTTTCCTACGG
AAAGTAAGTGCAGGCGCAAATGGCGATTTCAGGCACGCCTCCACGTCTTA
AATACCATTAAGTTACTAGTAAACATGTATCAGCTGCTTTTTTTGTCTCC
CGCTCGCTTTTTCCATCTCTATTTTTCTCTCCCCCCCCCCTCTCCCTCTC
TCCCTCTCCCTGTCTGTGTGTCGGTCTGTCTGTCTGCCTGTCTGTCTACC
TGTTCCGCTGTCTTTTATTCCCGCACTACCTCCCTGAAGTCGGAATAATC
CGGTCCCGATCCACCCAAGAGCTCAACCTCCCTCTTCCCCTCTCCGCCCC
TGCGTTGTTCTTCCTCCACCCCTTTGTTCGCGGCAGGTTTACACTCAGCA
GGCTTCGATGCGCGCACTAGCCTGCGTGGCAATGCTAATCGCCGTTGACG
ACGAGAAAGGCCCCCAGCTTTTCAAGGTATGTCCTTACCTTGCAGTGGAA
TTTTGGCGCAGTGCCATTGAAATTTAGAGCGTTCACGTACTGAACACATG
AAGTGTGTGGGGTTTTTCTCGACCCTGGCGGGGTGGCAAGCACGACACTT
GAATAGGAATCTTGCGCTCATACATTTTTTGTTAGCCATGCTTATCGCCA
TTGACGACGCAGTGGGCTCCAAGCTTTGCAAGGTATGTCGTCTAGATTCA
GAACCGCGACTGCGTTTTCTTGCCTGCTGGCGGAGTAAATGAGGGTACTT
GTGTAGGCCTATCACGAAAGTGTGCGCGACGGCTTCACTCCAAACGGAAT
GTGGCGTGCTGGCCGTGGTGATCACAACGGATCACGAGAGCGGTCTTGAC
CTTGTTCTACTGCTGTCGTCGTTGCTGCCACTGTTTTGTTTGTCTTTGCC
GTCCTCCGCCATGATTGCCTCGCCTCCCTTCTGTTGTCCCTCGACTTACC
CTTGTCGTCCATTTTGCTATTGTTTTGTTGTTGTTATTGTTATTTTTGGT
ATCAATTTTGCGCTTGTTCTTGTTATTTATGCTTTTGCTTCGCGGTCAAC
AGATCGACCCCGCGGGACACTACTTCCCTTACAAGGCCACTTCTTCCGGC
AGCAAGGAGCAGGAGGCCATGAACTGGTTGGAAAAAAAGGTAGAGCTCAT
CTCATGCATTCGTGCTTTCACATTTATCTCCAAGTCACTACTTTTGTATC
GTGTGTTATTCAGATCATCTTCCCCCAAGGTTCGCCTGCAAAGTCAACGC
ACCATCTGCAGCGAAGCCTTGGTGCCCGTCTTCATTTTTTGTCGGCTTTT
GGCGCCATACGCATTTCGGATGCGATCAGATGGACTGGCACGGGACATGG
GATTTGCTGAATCGCTCTTCCGATCGGATGGACTGGCACGGGACATGGAT
TTGCTGAATCGCTCCACGTCGTGACTTTGGGGTGTGGTGTTGGATATATC
CTGCCCGGCGAGACACACACCCACACGCTGCTGTCTTTGTTCGAGGCGAG
GCCAGGAGTAGAAAAGAAAATAAACGGCAATAATATCAACGACTTGACGT
GCTTTCCATGTGCTGCAAAGCACACGCAGGCCGTCCAAAACTCTGGAGGG
ATGCGTGCAGCCCAACCCAGTCTTGGTGGTCCTCGCCGTGAATGTTTGCT
TGCTCGTGCCAAGCGGCGGGAGGGCGCCACCGGTGTC
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Coding sequence (CDS) from alignment at P-fluviatile_contig82:92855..99141+

>mRNA_P-fluviatile_contig82.14804.1 ID=mRNA_P-fluviatile_contig82.14804.1|Name=mRNA_P-fluviatile_contig82.14804.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2082bp|location=Sequence derived from alignment at P-fluviatile_contig82:92855..99141+ (Porterinema fluviatile SAG_2381)
ATGTCTAGGGACTCGAACTACGACCACCAGATCACGGTCTTCTCTCCTCA
GGGGCGACTGTATCAAATAGATGTCTAGGGACTCGAACTACGACCACCAG
ATCACGGTCTTCTCTCCTCAGGGGCGACTGTATCAAATAGAGTATGCCTT
CAAGGCGGCGATGGGGCCAGGATTGACGTCGGTGTCAGTGCGGGGGAAGG
ACACGAGCGTCATGGTCACCCAGAAAAAAGTTCCGAGTATGCCTTCAAGG
CGGCGATGGGGCCAGGATTGACGTCGGTGTCAGTGCGGGGGAAGGACACG
AGCGTCATGGTCACCCAGAAAAAAGTTCCGGACCGACTTATCGACCCCAC
CTCGGTAACCAACATCTTCAAGATCACCGAAAAAATTGGCTGCCTAATGA
CCGGCATGATCGGACCGACTTATCGACCCCACCTCGGTAACCAACATCTT
CAAGATCACCGAAAAAATTGGCTGCCTAATGACCGGCATGATCGCCGACT
CGCGGGTGCTGGTGCAGCGGTTGCGGTACGAGGCCCACGAGTTCCGGTTC
AAGTACGGCTACGACTGCCCGGCGCACGTCCTGGCCCGCCGTATCGCCGA
CATTGCGCAGCCGACTCGCGGGTGCTGGTGCAGCGGTTGCGGTACGAGGC
CCACGAGTTCCGGTTCAAGTACGGCTACGACTGCCCGGCGCACGTCCTGG
CCCGCCGTATCGCCGACATTGCGCAGGTTTACACTCAGCAGGCTTCGATG
CGCGCACTAGCCTGCGTGGCAATGCTAATCGCCGTTGACGACGAGAAAGG
CCCCCAGCTTTTCAAGGTTTACACTCAGCAGGCTTCGATGCGCGCACTAG
CCTGCGTGGCAATGCTAATCGCCGTTGACGACGAGAAAGGCCCCCAGCTT
TTCAAGATCGACCCCGCGGGACACTACTTCCCTTACAAGGCCACTTCTTC
CGGCAGCAAGGAGCAGGAGGCCATGAACTGGTTGGAAAAAAAGGTAGAGC
TCATCTCATGCATTCGTGCTTTCACATTTATCTCCAAGTCACTACTTTTG
TATCGTGTGTTATTCAGATCATCTTCCCCCAAGGTTCGCCTGCAAAGTCA
ACGCACCATCTGCAGCGAAGCCTTGGTGCCCGTCTTCATTTTTTGTCGGC
TTTTGGCGCCATACGCATTTCGGATGCGATCATCGACCCCGCGGGACACT
ACTTCCCTTACAAGGCCACTTCTTCCGGCAGCAAGGAGCAGGAGGCCATG
AACTGGTTGGAAAAAAAGGTAGAGCTCATCTCATGCATTCGTGCTTTCAC
ATTTATCTCCAAGTCACTACTTTTGTATCGTGTGTTATTCAGATCATCTT
CCCCCAAGGTTCGCCTGCAAAGTCAACGCACCATCTGCAGCGAAGCCTTG
GTGCCCGTCTTCATTTTTTGTCGGCTTTTGGCGCCATACGCATTTCGGAT
GCGATCCGGATGGACTGGCACGGGACATGGATTTGCTGAATCGCTCCACG
TCGTGACTTTGGGGTGTGGTGTTGGATATATCCTGCCCGGCGAGACACAC
ACCCACACGCTGCTGTCTTTGTTCGAGGCGAGGCCAGGAGTAGAAAAGAA
AATAAACGGCAATAATATCAACGACTTGACGTGCTTTCCATGTGCTGCAA
AGCACACGCAGGCCGTCCAAAACTCTGGAGGGATGCGTGCAGCCCAACCC
AGTCTTGGTGGTCCTCGCCGTGAATGTTTGCTTGCTCGTGCCAAGCGGCG
GGAGGGCGCCACCGGTGTCCGGATGGACTGGCACGGGACATGGATTTGCT
GAATCGCTCCACGTCGTGACTTTGGGGTGTGGTGTTGGATATATCCTGCC
CGGCGAGACACACACCCACACGCTGCTGTCTTTGTTCGAGGCGAGGCCAG
GAGTAGAAAAGAAAATAAACGGCAATAATATCAACGACTTGACGTGCTTT
CCATGTGCTGCAAAGCACACGCAGGCCGTCCAAAACTCTGGAGGGATGCG
TGCAGCCCAACCCAGTCTTGGTGGTCCTCGCCGTGAATGTTTGCTTGCTC
GTGCCAAGCGGCGGGAGGGCGCCACCGGTGTC
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