mRNA_P-fluviatile_contig82.14800.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig82.14800.1
Unique NamemRNA_P-fluviatile_contig82.14800.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: D7FVK8_ECTSI (Asparagine synthetase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK8_ECTSI)

HSP 1 Score: 382 bits (982), Expect = 1.110e-129
Identity = 206/277 (74.37%), Postives = 222/277 (80.14%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSGGNT 971
            SS+ACVGVSSALPAAQL+LARSVA  IGIPLTE+ TTEGSDPDYIANEG+SCFHCKTHLYSALEAVA +AG ESRR                 AA   G  S S                 RRVVLFNGTNKDD+RDTTRVGLKAAA+F+VASPID LTKAEVRAV+RELGLPNWNHAASPCLRSRLAFGVQATPE+LVLVEKAEDA R  L LGVSHNLRVRAMHGNKAL+EVDAGE+L EALRS+ D+RSLILPLGF E+D+R FRSGAVSGG T
Sbjct:   48 SSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSS--------------AAAVGDGEPSTSALEGGGADGAGGIVEGGRRVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPEKLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGGLT 310          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A836CNR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR6_9STRA)

HSP 1 Score: 245 bits (625), Expect = 4.610e-76
Identity = 147/276 (53.26%), Postives = 168/276 (60.87%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGA--ESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSG 962
            +S AC+GVS +LPAAQ ELA ++A  IGI L EV T EGSDP+YIAN G+SC+HCK+HLYSALEA+AA+A A   SR G                                        G    R VLFNGTN++DR DTTRVGLKAAA + V+SPID LTKA+VRAV+R L LPNW+HAASPCLRSRLAFGV ATP  L  VE+AE A R  L LG   NLRVRAM   +ALVEVDA   L                      D+RAFRSGAVSG
Sbjct:   46 NSLACLGVSPSLPAAQRELAHTIADRIGIGLREVVTQEGSDPEYIANRGQSCYHCKSHLYSALEAIAADATAAVHSRNG----------------------------------------GDGDSRNVLFNGTNQEDRSDTTRVGLKAAAEYSVSSPIDTLTKAQVRAVARALALPNWDHAASPCLRSRLAFGVAATPASLARVERAEAAARALLALGPRDNLRVRAMAAERALVEVDAAR-LXXXXXXXXXXXXXXXXXXXXXXDVRAFRSGAVSG 280          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A6V1PUF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUF6_HETAK)

HSP 1 Score: 231 bits (588), Expect = 7.220e-71
Identity = 136/275 (49.45%), Postives = 165/275 (60.00%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSR-RVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSG 962
            +S AC+G+S+ALP  QL LAR VA  IGI L EV T EG D DYIAN+G++C+HCKTHLYS+L AVA  A A+                                            G   + +V+LFNGTNKDD RD TR+GLKAA NF+VASP+  +TK EVR  ++ LGLPNW HAASPCLRSRLAFGV AT E L  ++KAE  VR HLGLG   NLRVRA +  +A V VD   + A A    R +   IL LGF  +  RA+R+G +SG
Sbjct:   49 NSSACIGISAALPQDQLILAREVASSIGIHLQEVRTNEGYDADYIANKGKACYHCKTHLYSSLMAVAELAAAKGN----------------------------------------IIGTDGKEKVILFNGTNKDDLRDDTRIGLKAAENFKVASPLAEITKDEVRLAAKALGLPNWQHAASPCLRSRLAFGVAATKENLERIDKAEAIVRRHLGLGPEVNLRVRAANPTRAAVAVDQSLLEAVATHFPR-IEEKILALGFKNVSFRAYRTGMMSG 282          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A485LSD2_9STRA (Aste57867_23475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSD2_9STRA)

HSP 1 Score: 227 bits (578), Expect = 1.500e-69
Identity = 124/277 (44.77%), Postives = 171/277 (61.73%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSGGNT 971
            +S AC+GVS+ALPA QL +AR VA+HIGIPL E PTTEG+DP Y+ N+G+SC++CKT+LY+ L  V +         +  + P                                    +  + +LFNGTN DD+ D TR+GL AA+ F V SP++AL K  VR +S+ELGLPNWN+AASPCLRSRLAFGV AT + L  +EKAE+ VR+HL L  + NLRVR + GN+A +EVD  ++ +     +  ++      GF  +D+RAF+SG++SG +T
Sbjct:   43 NSIACLGVSAALPAEQLLVARGVAQHIGIPLWETPTTEGNDPRYVENKGKSCYYCKTNLYTTLNQVVSH--------IKTQMP------------------------------------AEAKPILFNGTNADDKLDPTRLGLVAASEFHVVSPLEALAKTSVRELSKELGLPNWNYAASPCLRSRLAFGVAATRDHLARIEKAEETVRSHLALTRADNLRVRFLAGNRAAIEVDLKKLESLLPTDIHSVQEACEKFGFAAVDVRAFKSGSLSGYST 275          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A4D9D8U2_9STRA (Asparagine synthetase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8U2_9STRA)

HSP 1 Score: 226 bits (576), Expect = 4.220e-68
Identity = 139/288 (48.26%), Postives = 170/288 (59.03%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLG--------------LGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILP-LGFDELDIRAFRSGAVS 959
            +S AC+G+S++LP  QL LAR VA HIGIPL E+PT EG+ P+Y+AN G SCFHCKTHLY+AL+AVAA  G              GP  +    +   G    S E            ++   V LFNGTN DDRRD TRVGLKAA  F+V SPID LTK EVR +++ + LPNW HAASPCLRSRLAFGV A    L  VE AE  V+  LG              LGV HN+RVR M   KA++E+D  E+L  A   +          LGF E+ +RAF+SG+VS
Sbjct:   61 NSVACIGLSASLPDNQLTLARQVAAHIGIPLREIPTYEGAAPEYVANRGMSCFHCKTHLYTALQAVAAVVGTHMN----------GPLSSNFLHSTQGG----STETLQHVKMNGADASAPSVVALFNGTNADDRRDPTRVGLKAATKFKVRSPIDHLTKEEVRLLAKAMNLPNWQHAASPCLRSRLAFGVPALEAHLRRVETAERIVKATLGGKFDDKEGEGGLSKLGVHHNVRVRLMARGKAMIELDV-ELLESAASYLSTFEGRFKKELGFTEVSLRAFKSGSVS 333          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A6G0W843_9STRA (Asparagine synthetase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W843_9STRA)

HSP 1 Score: 218 bits (554), Expect = 6.910e-66
Identity = 124/274 (45.26%), Postives = 168/274 (61.31%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSG 962
            +S AC+GVS+A+PA QL+LAR +AR+IGIPL E PT+EG DP Y+ N G+SC++CKT+LY+ L  VA+      +  +P    GT P                                     +L+NGTN DD+ D TR+GL AA  FRV SP++ LTKAEVR  S+ELGLPNWN+AASPCLRSRLAFGV AT E L  +E+AE A+R+ + L  S N+RVR +  N+A VE+DA    +     ++  + +   +GF +  +R F+SG+VSG
Sbjct:   43 NSIACLGVSAAVPADQLDLAREIARYIGIPLWETPTSEGQDPRYVENIGQSCYYCKTNLYTTLNQVASHV----KSNIP---EGTVP-------------------------------------ILYNGTNSDDKLDPTRLGLIAANEFRVVSPLEDLTKAEVRQASKELGLPNWNYAASPCLRSRLAFGVSATKEHLSRIERAERAIRSMMALKPSDNMRVRFLAQNRAAVELDASRQQSLLPEEVQAAQEICKQIGFVDAIVRPFKSGSVSG 272          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A024U4X0_9STRA (NAD_synthase domain-containing protein n=6 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4X0_9STRA)

HSP 1 Score: 217 bits (552), Expect = 1.220e-65
Identity = 126/274 (45.99%), Postives = 164/274 (59.85%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSG 962
            +S AC+GVS+AL   QL LAR VA  IGIPL E  T+EG DP Y+ N+G+SC++CKT+LY+ L  VA    A+S        PG  P                                     VLFNGTN DD+ D TR+GL AA  F+V SP++ LTKA VR +S+++GLPNWN+AASPCLRSRLAFGV A P+ L  +EKAE AVR+ + L    NLRVR +  N+A VE+DA  V A   R +  ++ +   LGFD+  +R F+SG++SG
Sbjct:   44 NSIACLGVSAALSQDQLTLARDVATAIGIPLWETRTSEGEDPRYVENKGQSCYYCKTNLYTTLSQVAERVKAQS--------PGVAP-------------------------------------VLFNGTNADDKFDPTRLGLVAATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVALTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSG 272          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A7S2W2V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2V8_9STRA)

HSP 1 Score: 216 bits (550), Expect = 6.210e-65
Identity = 129/266 (48.50%), Postives = 165/266 (62.03%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEV-LAEALRSMRDLRSLILPLGFDELDIR 935
            SS AC G+S++LP AQL+LAR VA HIGI + EVPT+EGS P+Y+ANEG +C+HCK+ LY+AL AVA  A             GTG P                                +  VVL+NGTN DD+RD TRVGL+AA +F+VASP+  L+K EVR  ++ LGLPNWNHAASPCLRSRLA GV AT E L  +E AE  VR+ +   V HNLRVR +   KA+VEVD+ ++ L E L      R+ +L LGF ++++R
Sbjct:   47 SSLACTGISASLPEAQLDLARHVAEHIGIQMREVPTSEGSHPEYLANEGMACYHCKSELYTALGAVARFASGV----------GTGGP--------------------------------ATPVVLYNGTNADDQRDPTRVGLRAAEHFQVASPVSHLSKDEVRQAAKHLGLPNWNHAASPCLRSRLALGVSATDETLRRIESAERFVRSIVPFDVHHNLRVRLLAKQKAVVEVDSEKLELTEGLFDDTK-RTELLSLGFAKVEVR 269          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A3F2RDH7_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RDH7_9STRA)

HSP 1 Score: 211 bits (536), Expect = 9.860e-63
Identity = 126/276 (45.65%), Postives = 169/276 (61.23%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSGGN 968
            +S AC+G+S+ALPA QL+ AR VA HIG PL E  T E     Y+ N+G+SC++CKT LY+ L  VA  A  E ++                  AA +G+++   +                + VL+NGTN DD+ DTTRVGL AA+ F V SP+  LTK EVR V++ +GLPNWN AASPCLRSRL FGV+AT   L  VEKAED VR  + L    ++RVR + GN+A VE+D  E L +A+R    + + +  LGFD +++RAFRSG++SG N
Sbjct:   56 TSAACIGLSAALPAVQLQQARQVALHIGAPLWECHTNEAKVEGYVENKGKSCYYCKTTLYATLNQVADFAWKEMQQH-----------------AAKSGSSAGKYQDL--------------KPVLYNGTNADDQLDTTRVGLVAASEFHVVSPLSGLTKQEVRDVAKYMGLPNWNAAASPCLRSRLQFGVEATQNHLRRVEKAEDFVRDLVQLETHMSMRVRFLAGNRAAVELDT-EALKKAVRQHDAIDAELRRLGFDAVEVRAFRSGSLSGYN 299          
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Match: A0A067C1Q5_SAPPC (NAD_synthase domain-containing protein (Fragment) n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C1Q5_SAPPC)

HSP 1 Score: 210 bits (534), Expect = 1.190e-62
Identity = 126/274 (45.99%), Postives = 158/274 (57.66%), Query Frame = 3
Query:  141 SSRACVGVSSALPAAQLELARSVARHIGIPLTEVPTTEGSDPDYIANEGESCFHCKTHLYSALEAVAAEAGAESRRGLPWRRPGTGPPGAVGGAAADAGAASWSEEXXXXXXXXXXXGASSRRVVLFNGTNKDDRRDTTRVGLKAAANFRVASPIDALTKAEVRAVSRELGLPNWNHAASPCLRSRLAFGVQATPERLVLVEKAEDAVRTHLGLGVSHNLRVRAMHGNKALVEVDAGEVLAEALRSMRDLRSLILPLGFDELDIRAFRSGAVSG 962
            +S AC+GVS+ALP+ QL LAR VA  IGIPL E PTTEG+DP YI N+G+SC++CKT+LY+ L  VA       R                                             S R  LFNGTN DD+ D TR+GL AA+ F+V SP+  LTK++VRA++ E GL NWN AASPCLRSRLAFGV AT + L  V  AE  VR+ L L    NLRVR +  N A +E+DA   LA ++     L +  + LGF +  +RAFRSG+VSG
Sbjct:   43 NSVACLGVSAALPSEQLALARKVATDIGIPLWETPTTEGADPLYIENKGQSCYYCKTNLYTTLNDVATHVHTTHR--------------------------------------------GSGRPRLFNGTNADDKLDPTRLGLVAASEFQVVSPLQDLTKSDVRALANERGLLNWNFAASPCLRSRLAFGVTATADHLQRVAAAEAFVRSFLRLAPHENLRVRFLPQNHAAIELDAARHLALSVTETAILAAKCVELGFTKTHVRAFRSGSVSG 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14800.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVK8_ECTSI1.110e-12974.37Asparagine synthetase domain-containing protein n=... [more]
A0A836CNR6_9STRA4.610e-7653.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6V1PUF6_HETAK7.220e-7149.45Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A485LSD2_9STRA1.500e-6944.77Aste57867_23475 protein n=1 Tax=Aphanomyces stella... [more]
A0A4D9D8U2_9STRA4.220e-6848.26Asparagine synthetase domain-containing protein n=... [more]
A0A6G0W843_9STRA6.910e-6645.26Asparagine synthetase domain-containing protein n=... [more]
A0A024U4X0_9STRA1.220e-6545.99NAD_synthase domain-containing protein n=6 Tax=Aph... [more]
A0A7S2W2V8_9STRA6.210e-6548.50Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A3F2RDH7_9STRA9.860e-6345.65Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A067C1Q5_SAPPC1.190e-6245.99NAD_synthase domain-containing protein (Fragment) ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig82contigP-fluviatile_contig82:57081..61612 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score71.2
Seed ortholog evalue4.1e-10
Seed eggNOG ortholog2880.D7FVK8
EggNOG free text desc.tRNA processing
EggNOG OGs2RYIH@2759,COG1606@1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRossmann-like alpha/beta/alpha sandwich fold
Ec32 orthologEc-15_003670.1
Exons6
Model size983
Cds size414
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817279.7730532-CDS-P-fluviatile_contig82:57080..573021622817279.7730532-CDS-P-fluviatile_contig82:57080..57302Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 57081..57302 +
1693571889.3575478-CDS-P-fluviatile_contig82:57080..573021693571889.3575478-CDS-P-fluviatile_contig82:57080..57302Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 57081..57302 +
1622817279.784179-CDS-P-fluviatile_contig82:58030..582221622817279.784179-CDS-P-fluviatile_contig82:58030..58222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 58031..58222 +
1693571889.3687737-CDS-P-fluviatile_contig82:58030..582221693571889.3687737-CDS-P-fluviatile_contig82:58030..58222Porterinema fluviatile SAG_2381CDSP-fluviatile_contig82 58031..58222 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817279.795222-UTR-P-fluviatile_contig82:58222..583671622817279.795222-UTR-P-fluviatile_contig82:58222..58367Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 58223..58367 +
1693571889.3794813-UTR-P-fluviatile_contig82:58222..583671693571889.3794813-UTR-P-fluviatile_contig82:58222..58367Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 58223..58367 +
1622817279.8069787-UTR-P-fluviatile_contig82:59457..595241622817279.8069787-UTR-P-fluviatile_contig82:59457..59524Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 59458..59524 +
1693571889.3948543-UTR-P-fluviatile_contig82:59457..595241693571889.3948543-UTR-P-fluviatile_contig82:59457..59524Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 59458..59524 +
1622817279.8179646-UTR-P-fluviatile_contig82:60013..601361622817279.8179646-UTR-P-fluviatile_contig82:60013..60136Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 60014..60136 +
1693571889.411233-UTR-P-fluviatile_contig82:60013..601361693571889.411233-UTR-P-fluviatile_contig82:60013..60136Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 60014..60136 +
1622817279.8289526-UTR-P-fluviatile_contig82:60830..609201622817279.8289526-UTR-P-fluviatile_contig82:60830..60920Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 60831..60920 +
1693571889.42114-UTR-P-fluviatile_contig82:60830..609201693571889.42114-UTR-P-fluviatile_contig82:60830..60920Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 60831..60920 +
1622817279.8440437-UTR-P-fluviatile_contig82:61468..616121622817279.8440437-UTR-P-fluviatile_contig82:61468..61612Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 61469..61612 +
1693571889.431634-UTR-P-fluviatile_contig82:61468..616121693571889.431634-UTR-P-fluviatile_contig82:61468..61612Porterinema fluviatile SAG_2381UTRP-fluviatile_contig82 61469..61612 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig82.14800.1prot_P-fluviatile_contig82.14800.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig82 57081..58222 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig82.14800.1

>prot_P-fluviatile_contig82.14800.1 ID=prot_P-fluviatile_contig82.14800.1|Name=mRNA_P-fluviatile_contig82.14800.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=138bp
MQNTIAALRSRVHSLGAPGANGKNIVAFSGGVDSSLVAALVHQVFPEAAG
LASACPRRCQQHSWSWRAAWRDISASLSQRFRQQRGPTRTISPTRARAAS
TARRTSTPPLRPSRRRRGRSPEEGFLGVDLVLVLLVL*
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mRNA from alignment at P-fluviatile_contig82:57081..61612+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig82.14800.1 ID=mRNA_P-fluviatile_contig82.14800.1|Name=mRNA_P-fluviatile_contig82.14800.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4532bp|location=Sequence derived from alignment at P-fluviatile_contig82:57081..61612+ (Porterinema fluviatile SAG_2381)
ATGCAGAATACTATAGCTGCGCTGCGTTCGCGAGTGCATTCTCTTGGTGC ACCGGGTGCCAACGGCAAGAACATCGTCGCCTTTTCGGGCGGCGTTGACT CGTCGCTGGTGGCTGCGTTGGTGCACCAAGTCTTTCCGGAAGCAGCAGGG CTTGCGTCGGCGTGTCCTCGGCGCTGCCAGCAGCACAGCTGGAGCTGGCG CGCAGCGTGGCGAGACATATCGGTGAGGGAGATGGTGTTATGGCTGGTTG GGAGTTGTGTGGCTACTTCAGCGGCCAACCTGTGCCTTGACCTCGCGGTA GACCGCTGTAACGGTTTCGTGAGAACTCTGCCATGTTCGTGGACGCTGCA CACCGATGACCGCTGTGTATGCCTGGCCAATAACCCATGGACAATGTTGT TCACCTTTTTTGTCCTTGTGGAATATTCCGGCACCCGGCAAGGCTTGTCC GGCCAGTGCAATGTGGATCATTTCAGGGTTGGGCATGTCAATGGAGCTAC TATTCGCCGGATACCCCCTCCCTCCGGCGCTCGGTGCCATCTCTCTTCTC AACCTCGCCTCTACTGGTTAACGAGTACAAGCACCAGCACCAGCTTACCC TGCAAGCTCGTTTCACATGAACATGAATACCCGGTTGCGGCTAGGATGCT GATTACTGTACCATGCCAGGCTATGTTGTGTAAACGTGAACACACCCTGG CCGGTATCACCACGTCGTGCAACACAGCAGGCAACACACACTTGGCCAGC GCTGATTTCAGTCGGCAAACTATCCATACAATCTGGGCGACCCTCGGATG TTGTCTTGGGATCTGGCACATCACCCTGTCGCCGCACTCAGATTCTTTGT TCACGATCGTGAACAATGTTTGCATGCAGGACTCCAGCCCTCCGGCGTAT TCATGAGCATCCGTCGCTCCCGCCCTCCGCACACACCACCGTTGTTCCAG GCATCCCTCTCACAGAGGTTCCGACAACAGAGGGGTCCGACCCGGACTAT ATCGCCAACGAGGGCGAGAGCTGCTTCCACTGCAAGACGCACCTCTACTC CGCCCTTGAGGCCGTCGCGGCGGAGGCGGGGGCGGAGTCCCGAAGAGGGC TTCCTTGGCGTCGACCTGGTACTGGTCCTCCTGGTGCTGTAGGTGGTGCT GCCGCCGATGCTGGTGCTGCGTCGTGGAGCGAAGAGGGAGAAGGAGCATG GGGTAGTGAGGGCCAGGGAGGGGCGTCGTCGCGGAGGGTGGTGCTGTTCA ACGGCACCAACAAGGATGACAGGCGCGATACAACCAGGTGGGCGGTTTTG TGTCATGGGGTGAGCATCTGCTCAGCTGTTGGTGTCTAGCAATTCTTGCG TATCGCCGATGTATGCCGTTTTTCGCATTCCGCCTCCGATACTGGCGGGC CACCTTCCGCGTGATCCATGCGCGCGCGTAAGCCCTTGCGTGAGCCCGGC CCGCGAGCGATCTTGGTGTCCGGTTTTCTGATCTCCCCCCAATGCTCCGT CCTCTCGAGGACGCGTGGTCAATGGTCTAACAACTAAGGCATGCAAAACA TGAGTACGCCCCCCTCGTCCGCCCCTCCCGCTGGCTCTCACCTCGGTGTT TGCCATCGGGATTGGGCTTTCGTCGCTTGGCATCGACGTAGTAATACAAG CCAGTTCACCTCGTGAACTCGGCAACCAGGTTACCGTCTCTTTTTTTTTT TTACTCTGTTTTTTTTGGCGGTAACCATAATGGTGGTCGAGAAGATCACG TTGTGCGGGGTGGAGAACCCTCACTCCGCGCAAGGGGGATGATCGCACCA CGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTCACACAGCGCTTAC AACTGTCTCTGGCTGGAAGTGAAAGCACCAGAAAATTAATTAAGTCATAC GCAGCTGTCATCCGTATGCAAGGAAGTAAGCACAAGATATCGAACACCCT TAGCAGGATGCAGCGCATCCTTCATGCGACTCGCCGAACACCTCACAGCG CTTCGCGCTTGGTGGTGTGAGCGCCTGGTCCGGTGAGAACCCGGCGTGCT CCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCA TGCACGACTATGAGTACACCCCCCTCGTCCTGTTCGTCTCGTGTCAACGA TCAACAGTGGGTCCGCGAATCCCTTGACGATTCGAAACGAAGCCGGTTTC GACAATCTGTAGTTTAGAGACTGCTCATGCGAGGAAGCCGACAAAGAGAA CAGGAATGATTCCGTATCTCCATCTCCTCCCACCAGCTTCTCTTCACCTG CTGCACGTAATTGTTTTTGCTTTCATCGTTTTTTGCGCCACCCACGCTTA CGGCGCCTGCCGGTGTTTCGGACGTAGGGTGGGACTCAAAGCCGCGGCGA ACTTCCGCGTGGCAAGCCCGATAGACGCGCTCACCAAGGCAGAGGTGGGT GGATTTCCCGGGTCAATGGCGGATGCTGGCGAGCAAGCGTGTTCACTTCT TCTTGATGACGAGTGGTATTTAGTCGGAGGCACGCCCGGCGACCGCTGTT TTCCTGTTTTTCATGGCGTGGAGCTTGCTCGTCCGGCAAGCACATGCACC TTCTGCAAGCGTTTCACACCTCGAGCTCGCGTATTGTATGCGTTGGGATA TTTTTGGTTTGACTTGCGTTGCGAACGACACCTTCGACGAAATTTGACAC GCAAATGAAGTGCCAACCAGGAGCGAGACCGTCCAGTTTCTAGCTTCGCG TCCAGTGATAGCAGTTGGTGGGTCTCCTCGTGAAATTGGCATTTGGCAAT CATTTTTGTTGAACCAAAGAAATGCGAAGGATGCTCGCACCACTGTGTAA AAGCGGCCGTGCGAAGTCCTGAACACTTGGTGAGTTGTGATAGTTTTCGT TTTTCGTTGTTTTTTTCAAATGGTTTGCTCCAGGTACGGGCGGTATCCCG AGAATTAGGGCTGCCGAACTGGAACCACGCTGCGTCTCCGTGTCTGCGGT CGAGGTTAGCGTTTGGGGTGCAGGCCACGCCGGAGAGACTCGTTCTGGTC GAAAAGGTGTGATGGGGCCGGTGTATCCATGTGTGCATGTGCTTGCTTTC TCAGTACTTTGAACGAAAATATCGGCCGGGGCTTCTGATTATGGTATCTA CCCCAAGCAATGATCTCTTCGCCCCCCCTCCCCTCCTCCACTCTGCCGGG GGGTTTTATGGATGGGAATGGGCCGGACGCTTCGGTCCCCGGGGCCGCGA AGGGCAGCCGTGCGTCTGTGTGTGTTGCGTGAAGTGTTTCTTCGTTTCGT AGTGAATAGGCCGGGCAAGTCGGCTGGCGAATGAGAATATACGGCAGGTC GCAGAAGATGTCACACGGTTTGGATCGAATTTCGAAGCTGAATATCTCGA CAGCGAGGAGTTGCCTGAGGTCAGACGATGCGTCGCTGCAAAGCTCTCAA CAGCATCTCTCGAAAGTCGCTCCGTTTGACGAAACTACCTCTTTCACCGT GGAGAAATTAAGCGTTGAAGATCGACCCAGGGGGTGTAATGTCTTGTGCG ACCTACGGTATGCCATGTACAAATCTCTTGGCAGAGTCGTTGCGGCGGCC CCACTCTCTTCCATAGAAAAAATTCTTCGTTGTTGGGGACGCTGAGTAGA AAGAGGAAGAAAACGGCTCTTTTCTGGGCGAATTGTGAGTGCCCTTACCC GCCAGTTTCATACCACGTGCTGCTTTTGATCCTGTTGGTCGCAATCTCAG GCAGAGGACGCTGTGCGGACACACTTGGGGCTGGGTGTCTCCCACAACCT TCGCGTTCGCGCCATGCACGGGAACAAGGCGCTCGTCGAGGTGGGCAATT GATGGAAGGTGCCGCCTGCTTGTTACGGTCAAGGCGCCGCTTTCCCTTTC CCCACGAAAGCAAGAGCGATAAATGGCTTCATCATGGACACAACCCGCCG CCCCCGCCCCTGCCCCTGCCCCCCCCCCGCCGGGGTCCACGTTTCGCCGA ATGTATTTGAGGGAAGCAAATGGAGGTTCGCAGGGTAGGCCCACGAAAAG GGTAGCCGCTCCCTTTCCTTTCCTCCCCTCCCCTCCCCTGTCACTCACAC GAACTCTTGTCTGTAGGTCTGTTTTTTCCTTCGTCCCCCGCTTTTCACCT TAATGGACTCTCTCTTGCCCCCCCTCCCCTCCCCCGCTCTGTGACACTTT TTATTGATGCGTGGTCGTGCCGTGCCGTACCGCGTCATACTGAATCGCAC CGGACCGTACCGTACCGTGCCGTACTCCTTCCTTATCTACTCGAATTGTG CGGTGCCGCGATTCACCATACCGCGCCGTGCTCCTCGGCATAATTCCGTG CCGTGCCGTGCCGGGCGATATCCTGATTGTCCCAACAGGTGGACGCCGGA GAGGTACTCGCCGAGGCCCTGCGGTCCATGCGAGACCTCCGCTCGCTGAT CCTCCCGCTCGGCTTCGACGAGTTAGACATCCGCGCCTTCCGAAGCGGCG CGGTCAGCGGTGGCAACACCGCCGCCGCCGCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig82:57081..61612+

>mRNA_P-fluviatile_contig82.14800.1 ID=mRNA_P-fluviatile_contig82.14800.1|Name=mRNA_P-fluviatile_contig82.14800.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=828bp|location=Sequence derived from alignment at P-fluviatile_contig82:57081..61612+ (Porterinema fluviatile SAG_2381)
ATGCAGAATACTATAGCTGCGCTGCGTTCGCGAGTGCATTCTCTTGGTGC
ACCGGGTGCCAACGGCAAGAACATCGTCGCCTTTTCGGGCGGCGTTGACT
CGTCGCTGGTGGCTGCGTTGGTGCACCAAGTCTTTCCGGAAGCAGCAGGG
CTTGCGTCGGCGTGTCCTCGGCGCTGCCAGCAGCACAGCTGGAGCTGGCG
CGCAGCGTGGCGAGACATATCGATGCAGAATACTATAGCTGCGCTGCGTT
CGCGAGTGCATTCTCTTGGTGCACCGGGTGCCAACGGCAAGAACATCGTC
GCCTTTTCGGGCGGCGTTGACTCGTCGCTGGTGGCTGCGTTGGTGCACCA
AGTCTTTCCGGAAGCAGCAGGGCTTGCGTCGGCGTGTCCTCGGCGCTGCC
AGCAGCACAGCTGGAGCTGGCGCGCAGCGTGGCGAGACATATCGGCATCC
CTCTCACAGAGGTTCCGACAACAGAGGGGTCCGACCCGGACTATATCGCC
AACGAGGGCGAGAGCTGCTTCCACTGCAAGACGCACCTCTACTCCGCCCT
TGAGGCCGTCGCGGCGGAGGCGGGGGCGGAGTCCCGAAGAGGGCTTCCTT
GGCGTCGACCTGGTACTGGTCCTCCTGGTGCTGTAGGCATCCCTCTCACA
GAGGTTCCGACAACAGAGGGGTCCGACCCGGACTATATCGCCAACGAGGG
CGAGAGCTGCTTCCACTGCAAGACGCACCTCTACTCCGCCCTTGAGGCCG
TCGCGGCGGAGGCGGGGGCGGAGTCCCGAAGAGGGCTTCCTTGGCGTCGA
CCTGGTACTGGTCCTCCTGGTGCTGTAG
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