mRNA_P-fluviatile_contig82.14795.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: D7FVK1_ECTSI (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK1_ECTSI) HSP 1 Score: 904 bits (2337), Expect = 1.030e-309 Identity = 479/714 (67.09%), Postives = 527/714 (73.81%), Query Frame = 1
Query: 1849 GRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKTCPVWDARGSCPSGLKCRFGGAHTDPETLKPIIRPGAPDLSFSDRINDLSRRALLLDLQAQLRRNRVEFKCDRRGWPAFLASLEKEHT-----DPPTAPALPEESATAPDGSPATT------------------------------------------------ASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQLTCPLTVKMRVGWDEKKPNADAVVRTVQREAARCRSMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQDPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPY--NGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSYAPQATVGPTA 3825
GRNK RP DDRPAQ DTLC HLS GR C +G+RCRF HDVKAYLE+K PDI +TCP+WDARGSCPSGLKCRFGGAHTD ETLKP++R G P S + INDLSR DLQ +LRRN+V F CDR GWPAFLASL+K++ PP++ A A A AA XXXXXXXXXXXXXXX A ++P P D G G G+ + +CLEGAEPRA++RTVDFEGKVY+APLTTVGNLPFRRVMKDQGADITCGEMAL+HHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLE++AK+DFVD+N+GCPIDLVCDKGMGAALM R+RKL+GIIAGM+SQLTCPLTVKMRVGWDEKKPNAD VVRTVQREA RCR GFPGSVA VM+HGRSRLQRYS+LADW+YVR+VA SQDPA PLPV+GNGDILSWRDH++RL+QAR+ Q E +WSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLE+WGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPP+ NGR+DLESLMCSLNPKDWIK+CEMLLGP P+ FEFEPKHKA+SYAPQA P A
Sbjct: 54 GRNKKRPKDDRPAQADTLCQHLSDGRPCTYGERCRFAHDVKAYLEKKPPDIAETCPIWDARGSCPSGLKCRFGGAHTDLETLKPVVREGGPAPSSFNYINDLSR-----DLQGKLRRNQVPFACDRNGWPAFLASLDKDYAPQASQQPPSSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRAKVEATAADXXXXXXXXXXXXXXXAVGGGVEAAGAATSADTSTPTVATPAGGASANGKD----KGGGRGEGEWVRSCLEGAEPRAQKRTVDFEGKVYIAPLTTVGNLPFRRVMKDQGADITCGEMALSHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEKNAKMDFVDINMGCPIDLVCDKGMGAALMGRSRKLRGIIAGMSSQLTCPLTVKMRVGWDEKKPNADVVVRTVQREADRCRKRGFPGSVARVMIHGRSRLQRYSKLADWDYVRQVAVSQDPALRPLPVIGNGDILSWRDHEERLEQARELQSQQGEGEG-----------------SQWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEYWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPFTPNGRDDLESLMCSLNPKDWIKICEMLLGPTPKDFEFEPKHKASSYAPQAAQAPAA 741
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A835ZAB5_9STRA (Dus domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAB5_9STRA) HSP 1 Score: 545 bits (1404), Expect = 6.080e-177 Identity = 259/404 (64.11%), Postives = 309/404 (76.49%), Query Frame = 1
Query: 2608 VDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQLTCPLTVKMRVGWDEKKPNADAVVRTVQREAARCRSMGFPGSVAC-VMVHGRSRLQRYSRLADWEYVREVAASQDPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSYAPQATVG 3816
VDFEGKVYVAPLTTVGNLPFRR+MKD GADITCGEMAL +LLKG SEWALL+RH EDVFGVQVAG HPDQMTRVAEL+ A VDFVD+N+GCPIDLVC +GMG+ALM++ RK++GI+ GM S L P+TVKMRVGWD+K P A ++ +Q F G C VM+HGRSRLQRY++ ADW Y+RE AAS+ PLPV+GNGDI+SW+DH+ LD+ G + STC M+ RGALIKPWLPTE+KEKRDWDIS++ERLDI +KFV++G+EHWGSDQ+GVN+TRRFLLEWLSFTCRYIPA +LEVLPQR+NE+PPP+ GR+DLE+L+ S N DWIK+ EMLLGP PEGF+FEPKHK+NSYAP + G
Sbjct: 2 VDFEGKVYVAPLTTVGNLPFRRIMKDLGADITCGEMALGQNLLKGQASEWALLKRHACEDVFGVQVAGGHPDQMTRVAELIRNEASVDFVDINMGCPIDLVCKQGMGSALMNKQRKVRGILMGMTSILEVPVTVKMRVGWDDKTPTAHKIIPMIQN---------FSGKGVCAVMIHGRSRLQRYTKSADWNYIREAAASEQSWLRPLPVIGNGDIMSWQDHKQHLDE-----------------------GGKNM-----STCAMVGRGALIKPWLPTEIKEKRDWDISATERLDILKKFVSYGIEHWGSDQLGVNRTRRFLLEWLSFTCRYIPAAILEVLPQRLNERPPPFFGRSDLETLLSSQNCADWIKISEMLLGPVPEGFQFEPKHKSNSYAPSVSRG 368
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A7S2XP93_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XP93_9STRA) HSP 1 Score: 503 bits (1296), Expect = 5.280e-158 Identity = 278/655 (42.44%), Postives = 376/655 (57.40%), Query Frame = 1
Query: 1846 RGRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKT---CPVWDARGSCPSGLKCRFGGAHTDPETLKPIIRPGAPDLSFSDR-INDLSRRALLLDLQAQLRRNRVEFKCDRRGWPAFLASLEKEHTDPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQLTCPLTVKMRVGWDEKKPNADAVVRTVQREAARCRSMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQDPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPP-PYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
RG NK R D + + D +C + G +C++G++CR++HD+K L + PDI + CP ++ +G C G+ CRFG +H + T K I A S + + ++ R+ +L+ QLR+ + FKC R +K+H P+ E G G+ +G + ++ +P +R+ +DF KVYVAPLTTVGNLPFRR+MK GADITCGEMA+ ++L+G SEWALL+RHP ED+FGVQ+A + DQ R ELLE VDFVD+NLGCP+DLVC+KG GAALM R ++LK + + S LTCP T+K+R GWDE KP A ++ VQ+ G G ++ VM+HGRSRLQRYS+LA+W+Y+ +VA SQD P +P++GNGDI S+ ++++++ R G +T MLARGAL+KPWLPTE+KE+R WDIS+SERLD+ + +V FGLEHWGSDQ GVN TRRFLLEWLSF RY+P G+LEV+PQ +NE+PP GRNDLE+LM S N DW+K+ EMLLGP PE F+F+PKHKAN Y
Sbjct: 71 RGMNKKRSRDAKVSDEDRVCLSVVRGEECSYGEKCRYNHDLKEILANRLPDIKELEGGCPNFNLKGYCEYGMMCRFGSSHLNMSTGKNIRSEDADQKEASIKPVMNILRKDVLI----QLRKKKYPFKCKRH------FEKKKDHGGAKEEPSPKVE-----------------------------------------------------------------------GDTGDVSGRSD------AVDTPQP-TKRKLIDFRNKVYVAPLTTVGNLPFRRIMKKFGADITCGEMAIGSNILEGKPSEWALLKRHPDEDIFGVQIASGYADQFARTCELLEAETTVDFVDLNLGCPLDLVCNKGAGAALMLRDKRLKECLEEITSALTCPFTIKIRTGWDESKPVAHQLIPKVQK-------WGIDG-LSAVMIHGRSRLQRYSKLANWDYIAQVANSQDSELPRIPIIGNGDIFSFSEYEEKV-----------------------------AREGINATA-MLARGALVKPWLPTEIKERRHWDISASERLDLLKDYVKFGLEHWGSDQKGVNSTRRFLLEWLSFLHRYVPVGLLEVVPQAMNERPPLNMCGRNDLETLMLSSNCADWVKITEMLLGPVPEDFKFDPKHKANGY 599
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A448ZFI2_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFI2_9STRA) HSP 1 Score: 499 bits (1284), Expect = 4.010e-155 Identity = 288/672 (42.86%), Postives = 376/672 (55.95%), Query Frame = 1
Query: 1837 KGKRGRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDI-------GKTCPVWDARGSCPSGLKCRFGGAHTDP--ETLKPIIR--------PGAPDLSFSD-RINDLSRRALLLDLQAQLRRNRVEFKCDRRGWPAFLASLEKEHTDPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQLTCPLTVKMRVGWDEKKPNADAVVRTVQREAARCRSMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQDPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPY-NGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
K +RG+NK RP D R + +C + G C +GD CRF HD+K ++ + DI G +CP + G C G CR G H E ++ + G + + + +IN S L D+ QLR+ F+C R F E D PT P PD + + +A+AAP AR A+S + ++ VDF KVYVAPLTTVGNLPFRR+MK GADITCGEMA+A +LL+G SEWALL+RHPSEDVFG+Q+A AH DQ TRV+EL+E++ VDFVD+NLGCP+DL+C+KG GAALM R KLKG +AGM+ L+C +TVKMR GW+ +P A +V +Q ++A +MVHGRSRLQRY ADW+Y+ +VA ++ P +P++GNGDI S+ ++++++ ARD ST ML RGALIKPWLPTE+KEKRDWDIS+SERLDI + FV GLEHWGSDQ G+N TRRFLLEWLSF RY+P G+LEVLPQ++N +PP Y GR+DLE+L S + DW+K+ EMLLGP P GF F+PKHK+ +Y
Sbjct: 100 KKRRGQNKKRPRDAREDNAEKVCMAILRGESCPYGDTCRFSHDLKGFMATRPADICELVDAMGGSCPTFRTTGYCFYGAICRLGSCHITKAGENVRDEAKMAEYQKEKAGGKEGALEEPKIN--SGTILPRDVVFQLRKKTYPFECKR-----FC-----EKKDKPTPP---------PDATNTDAGAPTAEAAPAPIKEAKDTNSPTIHTDASPATTTAARTNTSASS----------------------------------FTPLDHLKTKKIVDFSNKVYVAPLTTVGNLPFRRIMKQYGADITCGEMAVATNLLEGKTSEWALLKRHPSEDVFGIQIAAAHADQFTRVSELIEKYTDVDFVDMNLGCPLDLLCNKGAGAALMMRENKLKGALAGMSKNLSCSITVKMRTGWNIHRPFAHELVPKIQSWKI--------DNLAAIMVHGRSRLQRYKLDADWDYIGKVANAESKDIPRVPLIGNGDIFSFSEYKEKV-LARDG----------------------------LSTTAMLGRGALIKPWLPTEIKEKRDWDISASERLDILKDFVKHGLEHWGSDQQGINNTRRFLLEWLSFLYRYVPVGLLEVLPQKMNHRPPLYLKGRSDLETLFLSPHSSDWVKISEMLLGPVPNGFAFKPKHKSAAY 679
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A329S4B6_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329S4B6_9STRA) HSP 1 Score: 492 bits (1267), Expect = 1.250e-152 Identity = 290/690 (42.03%), Postives = 382/690 (55.36%), Query Frame = 1
Query: 1837 KGKRGRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKTCPVWDARGSCPSGLKCRFGGAHTDPE--TLKPIIRPGAPDLS---FSDRINDLSRRALLLDLQAQLRRNRVEFKCDRRGWPAFLASLEKEHTDPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPR---AERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQL-------------TCPLTVKMRVGWDEKKPNADAVVRTVQREAARCR-----------SMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQ-----DPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
K KRG K RP D D LC ++ G C FGD C+F HD+ Y++RK D+G+ CPV+DA G C G+ CRF AH + T + I R G + S D +NDL+ DL+ +LR++ +F+ ++ + K+ + E A A+ +AA E A+ D P S+ A +E A AER+ VDF+ K+Y+APLTTVGNLPFRR+MK GADITCGEMA+A +LLK SEWALLRRH SEDVFGVQ+AG+ DQM RV ELL + +DFVD+N+GCPID+VC G G+ALM+R +L +++G + L T LTVK+R GW EK+P A +V +Q A + S+ + VHGRSRLQRY++ ADW+Y+ + + ++ D P +P VG GD+LS+ + D+HL + G+ TC MLARGALIKPWLPTE+KE+R WDIS+SERL++ + FV FGLEHWGSDQ GVN+TRR+LLEW SF CRYIP G+LE LPQRIN++P PY GR+ LE+LM S DW+K+ EMLLGP PEGF+F PKH+AN+Y
Sbjct: 80 KKKRGTFKKRPVDAEQDPADMLCRPVASGESCQFGDNCKFSHDIDDYMKRKPKDLGERCPVFDAVGYCRYGMACRFAKAHIEKVDGTYRNIKREGYVETSGQDLGDEVNDLTH-----DLRLKLRKDTYDFQSKQQ--------MRKDKKNNXXXXXXDEGKQ--------VKAEAALEAA------------------QNSEKSTAVTTESSEAAKTDSVPEKVTSEPESE---------------DAKMEPAAESPLLAERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMARVCELLARETDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTVNTPGLTVKLRTGWSEKQPTAHKLVPKLQAVRASQAYVNAAVVTADFKLRATQSIDAITVHGRSRLQRYTKNADWDYIFQCSDAEKNSIDDKPLPHVPFVGGGDVLSYEEF--------DQHL----------------------QNGKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLELLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLETLPQRINDRPSPYYGRSTLETLMASDQAVDWVKISEMLLGPVPEGFQFVPKHRANAY 684
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A225WAJ9_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WAJ9_9STRA) HSP 1 Score: 491 bits (1265), Expect = 1.950e-152 Identity = 298/696 (42.82%), Postives = 389/696 (55.89%), Query Frame = 1
Query: 1828 ERSKGKRGRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKTCPVWDARGSCPSGLKCRFGGAHTDPE--TLKPIIRPG---APDLSFSDRINDLSRRALLLDLQAQLRRNRVEFKCD------RRGWPAFLASLEKEHTDPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQL-------------TCPLTVKMRVGWDEKKPNADAVVRTVQREAARCR-----------SMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQ-----DPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
E K KRG K RP+D D LC ++ G C FGD C+F HD+ Y++RK D+G+ CPV+DA G C G+ CRF AH + + + R G P D +NDL+ DL+ +LR++ +F+ ++ + E + T + P +P ++ T + + ASAS XXXXXXXXXXXX A SP AER+ VDF+ K+Y+APLTTVGNLPFRR++K GADITCGEMA+A +LLK SEWALLRRH SEDVFGVQ+AG+ DQM RV ELL + ++FVD+N+GCPID+VC G G+ALM+R +L +++G + L T LTVK+R GW +K+P A +V +Q A + SV +MVHGRSRLQRY++ ADW+Y+ + + +Q D P +P VG GD+LS+ + + L G+ TC MLARGALIKPWLPTE+KE+R WDISSSER D+ + FV FGLEHWGSDQ GVN+TRR+LLEW SF RYIP G+LE LPQRIN++P PY GRNDLE+LM S DW+K+ EMLLGP P+GF+F PKH+AN+Y
Sbjct: 70 EGGKKKRGTFKKRPADVDQDPADLLCRPVASGEGCQFGDNCKFSHDINDYMKRKPKDLGERCPVFDAMGYCRYGMACRFATAHIEKVDGAYRNLKREGYVETPGHDLGDEVNDLTH-----DLRLKLRKDTYDFQSKQQMKKIKKNGKRQQGNNETKETKSESTPEIPVKADTVSEDAKTEVASAS--------------DVLXXXXXXXXXXXXXXXXXXXAESPL--------------------------------------LAERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMARVCELLARETDINFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGDTVNTPGLTVKLRTGWSDKQPTAHKLVPKLQVVRASQAYVNAAVVTADFKLHATQSVDAIMVHGRSRLQRYTKNADWDYIFQCSDAQKDSNDDKPLPHVPFVGGGDVLSYEEFDEHLQN------------------------------GKLDTC-MLARGALIKPWLPTEIKERRHWDISSSERFDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLYRYIPVGLLETLPQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAY 677
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: D0MWM4_PHYIT (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=11 Tax=Phytophthora TaxID=4783 RepID=D0MWM4_PHYIT) HSP 1 Score: 491 bits (1263), Expect = 3.890e-152 Identity = 284/687 (41.34%), Postives = 377/687 (54.88%), Query Frame = 1
Query: 1837 KGKRGRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKTCPVWDARGSCPSGLKCRFGGAHTDP--ETLKPIIRPG---APDLSFSDRINDLSRRALLLDLQAQLRRNRVEFKCDRRGWPAFLASLEKEHTDPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQL-------------TCPLTVKMRVGWDEKKPNADAVV---RTVQREAARCRS--------MGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQ-----DPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
K KRG K RP D D LC ++ G C FGD C+F HD+ Y++RK D+G+ CPV+DA G C G+ CRF +H + + + + R G P D NDL+ DL+ +LR++ +F+ ++ + +K + +A S +T S++AA E+ PA +P ER+ VDF+ K+Y+APLTTVGNLPFRR+MK GADITCGEMA+A +LLK SEWALLRRH SEDVFGVQ+AG+ DQMTRV ELL + +DFVD+N+GCPID+VC G G+ALM+R +L +++G + L T LTVK+R GW EK+P A ++ + V+ A S + S+ + VHGRSRLQRY++ ADW+Y+ + + +Q D +P VG GD+LS+ + + L G+ TC MLARGALIKPWLPTE+KE+R WDIS+SERLD+ + FV FGLEHWGSDQ GVN+TRR+LLEW SF CRYIP GVLE LPQRIN++P PY GR+DLE+LM S DW+K+ EMLLGP P+GF+F PKH+AN+Y
Sbjct: 80 KKKRGTFKKRPIDAEQDPADLLCRPVASGEGCKFGDSCKFSHDIDDYMKRKPKDLGERCPVFDAVGYCRYGMACRFAKSHIEKVDDIYRNLKREGYVETPGHDLGDEANDLTH-----DLRLKLRKDTYDFQSKQQ-----MRKDKKXXXXXXXXXXXXDANAEVTQNSEESTVVESSEAA--------------KANSVPEKVTPEPESEDAKMEPAAESPLLP---------------------------------ERKPVDFKRKIYIAPLTTVGNLPFRRLMKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMTRVCELLTRETDIDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGIVNTPGLTVKLRTGWSEKQPTAHKLIPKLQAVRASQAYVNSAVVTADFKLRATQSIDAITVHGRSRLQRYTKHADWDYIFQCSDAQKGSIDDKPLSNIPFVGGGDVLSYEEFDEHLQN------------------------------GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGVLETLPQRINDRPSPYYGRSDLETLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAY 678
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: B8BWN9_THAPS (Dus domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWN9_THAPS) HSP 1 Score: 479 bits (1232), Expect = 4.540e-152 Identity = 236/410 (57.56%), Postives = 293/410 (71.46%), Query Frame = 1
Query: 2587 PRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELL--EQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQLTCPLTVKMRVGWDEKKPNADAVVRTVQREAARCRSMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQDPAFPPLPVVGNGDILSWRDHQD----RLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYN-GRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
P ER+ +DF KVY+APLTTVGNLPFRR+MK GADITCGEMA+A LL+G SEWALL+RH SEDVFGVQ+A H DQ TRVAEL+ E +VDFVD+NLGCPIDLVC+KG GA+LM R RKLKG + G+ L CP+T+K+R GW+E +P A +V+T+Q + G+ G + VM+HGRSRLQRYSRLA+W+Y+ EVA Q +PV+GNGD+ S+ D++ R++ D + L S ML RGALIKPWLPTE+KE+R WDIS++ERLD+ + FV FGLEHWGSDQ GVN TRRFLLEW+SF RY+P G+LEV+PQ++N++PP GRNDLE+LM S N DWI++CEMLLGP P+ FEFEPKHKANSY
Sbjct: 2 PAKERKLIDFRNKVYIAPLTTVGNLPFRRIMKGFGADITCGEMAIADQLLQGKPSEWALLKRHSSEDVFGVQIATGHADQYTRVAELIANEPEIEVDFVDMNLGCPIDLVCEKGAGASLMLRERKLKGSVEGLTKTLNCPVTIKIRTGWNENEPIAHKLVQTIQ-------AWGYDG-IGAVMIHGRSRLQRYSRLANWDYIAEVAKCQAANLHQIPVIGNGDLFSYTDYEQNVLKRVNDCDDSNCL--------------------------SPTAMLGRGALIKPWLPTEIKERRHWDISATERLDMLKDFVRFGLEHWGSDQQGVNYTRRFLLEWISFLHRYVPVGMLEVIPQQMNQRPPNNMCGRNDLETLMLSKNCADWIRICEMLLGPVPDDFEFEPKHKANSY 377
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A6A4DMC7_9STRA (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4DMC7_9STRA) HSP 1 Score: 489 bits (1259), Expect = 9.710e-152 Identity = 286/688 (41.57%), Postives = 374/688 (54.36%), Query Frame = 1
Query: 1858 KNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKTCPVWDARGSCPSGLKCRFGGAHTDPE--TLKPIIRPGAPD-LSFSDRINDLSRRALLLDLQAQLRRNRVEFKCDRR----------GWPAFLASLEKEHTDPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQL-------------TCPLTVKMRVGWDEKKPNADAVVRTVQREAARCR-----------SMGFPGSVACVMVHGRSRLQRYSRLADWEYVREVAASQ-----DPAFPPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSY 3795
K RP D D LC + G C FGD C+F HDV Y++RK D+G+ CPV+D G C G+ CRF AH + T + + G + +D +NDL+ DL+ +LR++ +F+ ++ TD +APA ++ D +P T + + D A E A SP AER+ VDF+ K+Y+APLTTVGNLPFRR++K GADITCGEMA+A +LLK SEWALLRRH SEDVFGVQ+AG+ DQM RV ELL + +VDFVD+N+GCPID+VC G G+ALM+R +L +++G + L T LTVK+R GW +K+P A +V +Q A + SV +MVHGRSRLQRY++ ADW+Y+ + + +Q D P +P VG GD+LS+ + D HL G+ TC MLARGALIKPWLPTE+KE+R WDIS+SERLD+ + FV FGLEHWGSDQ GVN+TRR+LLEW SF CRYIP G+LE LPQRIN++P PY GRN+LE+LM S DW+K+ EMLLGP P+GF+F PKH+AN+Y
Sbjct: 84 KKRPVDAEQDPADMLCRPAASGEGCQFGDSCKFSHDVDDYMKRKPKDLGERCPVFDVVGYCRYGMACRFAKAHIEKVDGTYRNMKHEGYVEGQDLADEVNDLTH-----DLRLKLRKDTYDFQSKQQMKKGXXXXXXXXXXXXXXXXXPETDAASAPAADVKT----DSAPVETETETGD----------------------------ATMEPAAESPL--------------------------------------LAERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQLAGSFSDQMARVCELLARETEVDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGGTVNTPGLTVKLRTGWSDKQPTAHKLVPKLQSVRASQAYVNAAVVTADFKLRATQSVDAIMVHGRSRLQRYTKNADWDYIFQCSDAQQDRIDDKDMPSVPFVGGGDVLSYEEF--------DEHLAN----------------------GKLDTC-MLARGALIKPWLPTEIKERRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLESLPQRINDRPAPYYGRNELETLMASDQAVDWVKISEMLLGPVPDGFQFVPKHRANAY 665
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Match: A0A0P1APY1_PLAHL (tRNA-dihydrouridine(47) synthase [NAD(P)(+)] n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APY1_PLAHL) HSP 1 Score: 489 bits (1259), Expect = 1.600e-151 Identity = 297/715 (41.54%), Postives = 378/715 (52.87%), Query Frame = 1
Query: 1837 KGKRGRNKNRPSDDRPAQRDTLCGHLSVGRDCNFGDRCRFDHDVKAYLERKGPDIGKTCPVWDARGSCPSGLKCRFGGAHTDPETLKPII----RPG---APDLSFSDRINDLSRRALLLDLQAQLRRNRVEFKCD-----------RRGWPAFLASLEKEHT-------DPPTAPALPEESATAPDGSPATTASASADAAPXXXXXXXXXXXXXXXXXXXXXXXXRARFEEGAASPADGAPXXXXXXXXSDGKLGNGNGNAGGDRIGACLEGAEPRAERRTVDFEGKVYVAPLTTVGNLPFRRVMKDQGADITCGEMALAHHLLKGNGSEWALLRRHPSEDVFGVQVAGAHPDQMTRVAELLEQHAKVDFVDVNLGCPIDLVCDKGMGAALMSRTRKLKGIIAGMASQLTCP-------------LTVKMRVGWDEKKPNADAVVRTVQREAARCRSMGFPG--------------SVACVMVHGRSRLQRYSRLADWEYVREVAASQDPAF-----PPLPVVGNGDILSWRDHQDRLDQARDRHLLQAEXXXXXXXXXXXXXGTREQRPGRWSTCCMLARGALIKPWLPTEVKEKRDWDISSSERLDIYRKFVNFGLEHWGSDQMGVNKTRRFLLEWLSFTCRYIPAGVLEVLPQRINEKPPPYNGRNDLESLMCSLNPKDWIKLCEMLLGPAPEGFEFEPKHKANSYAPQAT 3810
K KRG K RP D D LC ++ G C FGD C+F HD+ Y++RK D+G CPV+DA+G C GL CRF AH E L I R G P + D +NDLS D++ +LR++ F+ R+ P EH + PTA L +T P ++AP R + PA +P AER+ VDF+ K+Y+APLTTVGNLPFRR++K GADITCGEMA+A +LLK SEWALLRRH SEDVFGVQ+AG+ DQM RV ELL + VDFVD+N+GCPID+VC G G+ALM+R +L +++G + L LTVK+R GW EK+PNA +V +Q A SM + S+ + VHGRSRLQRY++ ADW+Y+ + + +Q P +P +G GD+LS+ + L G+ TC MLARGALIKPWLPTE+KE R WDIS+SERLD+ + FV FGLEHWGSDQ GVN+TRR+LLEW SF CRYIP G+L+ LPQRIN++P PY GRNDLE+LM S DW+K+ EMLLGP P GF+F PKH+AN+Y QAT
Sbjct: 76 KKKRGTFKKRPIDVEQDPADLLCRPVASGESCQFGDSCKFSHDIDDYMKRKPKDLGDCCPVFDAKGYCRYGLACRFAHAHI--EKLNGIYCNVRRKGYVETPGDNMCDEVNDLSH-----DVRTKLRKDTYNFQSKQQMKKGKKNNKRQQRPDVDGKSTMEHAGETPQIIELPTALRLDSADSTVP----------IIESAPDVQV--------------------RTYLNDVQMEPASESPLL---------------------------------AERKPVDFKRKIYIAPLTTVGNLPFRRLLKQTGADITCGEMAMATNLLKAQQSEWALLRRHKSEDVFGVQIAGSFSDQMARVCELLARETDVDFVDINMGCPIDIVCRAGAGSALMTRPPRLLEVVSGALTGLELGTRMRTGDISKSPGLTVKLRTGWSEKQPNAHKLVPKLQSVRA---SMAYVNAAVVTADFRLRATQSIDAITVHGRSRLQRYTKNADWDYIYQCSDAQQDTVDNNPQPHVPFIGGGDVLSYEEFNKHLQN------------------------------GKLDTC-MLARGALIKPWLPTEIKECRHWDISASERLDLLKDFVRFGLEHWGSDQKGVNRTRRYLLEWQSFLCRYIPVGLLDTLPQRINDRPSPYYGRNDLETLMASDQAVDWVKISEMLLGPVPNGFQFVPKHRANAY--QAT 684 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig82.14795.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig82.14795.1 >prot_P-fluviatile_contig82.14795.1 ID=prot_P-fluviatile_contig82.14795.1|Name=mRNA_P-fluviatile_contig82.14795.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=859bp MEGSRQDDPAADSPTTPTPAAGAATANATSAGAAVAEAATVGSDADAAAAback to top mRNA from alignment at P-fluviatile_contig82:155..20970+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig82.14795.1 ID=mRNA_P-fluviatile_contig82.14795.1|Name=mRNA_P-fluviatile_contig82.14795.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=20816bp|location=Sequence derived from alignment at P-fluviatile_contig82:155..20970+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig82:155..20970+ >mRNA_P-fluviatile_contig82.14795.1 ID=mRNA_P-fluviatile_contig82.14795.1|Name=mRNA_P-fluviatile_contig82.14795.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5154bp|location=Sequence derived from alignment at P-fluviatile_contig82:155..20970+ (Porterinema fluviatile SAG_2381)back to top |