mRNA_P-fluviatile_contig81.14791.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig81.14791.1 vs. uniprot
Match: D7FRV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV5_ECTSI) HSP 1 Score: 485 bits (1248), Expect = 1.600e-149 Identity = 352/619 (56.87%), Postives = 400/619 (64.62%), Query Frame = 1
Query: 1 MCSSEPGKGGVRGGXXXXXXXXGGLGG--------LSEFWSCLDPKQRDSLLTINGRAVREALDCELCRDLVRSATFALEEETKVGMEPPXXXXXXXXXXXXXXXXXXXXXXXXXQGQPSKLRRKPRASGLRVIGDQAFMADWVGWPELQQRWPCYAKYLAGVFVLQPSEVLNRSLAEMADIDEPWEAVAREP-ERGCYCKGKMILSVVDMLTYPRPVRKFEVLINKGISVQSLRELMLVNVKLESLPKLVLLTKGRPIGHDKDGFTLAELGFRNRQKVVVSQVLGGPTTEDSGTEEKNRQFVGDLLFGGGTSPNDPASATPKLNKASAG------------------GGT----------GFIPPVKSHGAPTPAPAAGTAVFEGSGG--GVIGTVAXXXXXXXXXXXGT----------GRKRAAEGELLESEXXXXXXXXXXXXXXXXXXXXXXEKDYHDGGSGHXXXXXXXXXXXXXXXXXXXXXXXXXQPLNTGRTPQLVMDALEEAASDQNKWAGEVEGLGEKEGSERFGGCFPGPERVALSVLSLGPDGEMNGEPGAGRVPSLFANHGFQVLGQALSRLARGQVAEAWKAELKAREHESKLLKELEAEEGGA 1710
MCS EPG+GG XXXXXXXX LSEFWSCLDPKQRDSLLTING+AVR+ALDC+LCRDLV SATFALEEETKV M+P XXXXXXXXXXXXXXXXXXX P K KP ASGLRVIGD+AFMADWVGWPE+Q RWPCY KYLAGVF LQ +EVL+R+++ M++I+EPW V EP +RGCYCKGK+IL VVDMLTYPRPVRKFEVL+ +S+ LRE+MLVNVKLES KLVLLT+GR IG +K+ TL ELGF+NRQ+VVVSQVLGGP+T+DSGTEEKNRQFVGDLLFGG T PN+ + PKLNKA+AG GGT G P SH T + +AG S G G + + XXX G GRKRAA+ E YH G+G XXXXXXXXXXXXXXXXX +P R +MD LE + + +E + GPE + LSVL GPDGE NGEPG GRVPSLFANHGFQVLGQ LSRLARG +A+AWKAELKARE+ES LLKELEAE+GGA
Sbjct: 1 MCSPEPGRGGXXXXXXXXXXXXXXXXXXXXXXXXXLSEFWSCLDPKQRDSLLTINGKAVRDALDCDLCRDLVSSATFALEEETKVDMQP-------XXXXXXXXXXXXXXXXXXXXXXPPKHSPKPTASGLRVIGDKAFMADWVGWPEMQMRWPCYVKYLAGVFALQQTEVLDRAVSAMSEIEEPWRPVPPEPGDRGCYCKGKLILKVVDMLTYPRPVRKFEVLVEDQMSLLGLREIMLVNVKLESATKLVLLTRGRAIGPEKNNHTLQELGFKNRQQVVVSQVLGGPSTDDSGTEEKNRQFVGDLLFGGST-PNEATATAPKLNKATAGAXXXXXXXXXXXSSAVANGGTVDGNASPPPKGSAPGATSHDGGTASSSAGRFAGPTSKGMEGCLARDSASXXXPVDHSPGADGGGAAEASRGRKRAADDRYDEV--------------------------YHYEGAGDFDDXXXXXXXXXXXXXXXXXHSHGKEPPLMERADS-IMDTLEAVHAQE---------------TEAY--AVRGPELLVLSVLKCGPDGETNGEPGTGRVPSLFANHGFQVLGQTLSRLARGNIAQAWKAELKAREYESSLLKELEAEQGGA 567
BLAST of mRNA_P-fluviatile_contig81.14791.1 vs. uniprot
Match: A0A6H5JCE8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE8_9PHAE) HSP 1 Score: 369 bits (948), Expect = 5.390e-104 Identity = 236/488 (48.36%), Postives = 282/488 (57.79%), Query Frame = 1
Query: 394 MADWVGWPELQQRWPCYAKYLAGVFVLQPSEVLNRSLAEMADIDEPWEAVAREP-ERGCYCKGKMILSVVDMLTYPRPVRKFEVLINKGISVQSLRELMLVNVKLESLPKLVLLTKGRPIGHDKDGFTLAELGFRNRQKVVVSQVLGGPTTEDSGTEEKNRQFVGDLLFGGGTSPNDPASATPKLNKASAG------GGT----------------------GFIPPVKSHGAPTPAPAAG-----TAVFEGSGGGVIGTVAXXXXXXXXXXXGTG---------RKRAAEGELLESEXXXXXXXXXXXXXXXXXXXXXXEKDYHDGGSGHXXXXXXXXXXXXXXXXXXXXXXXXXQPLNTGRTPQL------VMDALEEAASDQNKWAGEVEGLGEKEGSERFGGCFPGPERVALSVLSLGPDGEMNGEPGAGRVPSLFANHGFQVLGQALSRLARGQVAEAWKAELKAREHESKLLKELEAEEGGA 1710
MADWVGWPE+Q RWPCY KYLAGVF LQP+EVL+R+++ M++I+EPW + EP +RGCYCKGK+IL VVDMLTYPRPVRKFEVL+ +S+ LRE+MLVNVKLES KLVLLT+GR IG +K+ TL ELGF+N+Q+VVVSQVLGGP+T DSGTEEKNRQFVGDLLFGG T PN+ + PKLNKA+AG GGT GF P S G T + + G T +G+ G + A G RKRAA+ + E+ D+ GSGH XX G+ P L +MD LE + + +E + GPE + LSVL GPDGE NGEPG GRVPSLFANHGFQVLGQ LSRLAR +A+AWKAELKARE+ES LLKELEAE+GGA
Sbjct: 1 MADWVGWPEMQMRWPCYVKYLAGVFALQPTEVLDRAVSAMSEIEEPWRPMPPEPGDRGCYCKGKLILKVVDMLTYPRPVRKFEVLVEDQMSLLGLREIMLVNVKLESATKLVLLTRGRAIGPEKNNHTLQELGFKNKQQVVVSQVLGGPSTNDSGTEEKNRQFVGDLLFGGST-PNEATATAPKLNKATAGAAGGATGGTEAASSAIANGGIVDGNAAPPLKGFSPGSTSRGGGTASRSVGRVAGATDASKGAEGCLERDSASPPPPVDNSPGADGEGAAKASRGRKRAADDQYDEA------------------YDYEGSSDFDGDGSGHDXXYDDEGGDKHGH----------------GKEPPLMERVDSIMDTLEAVHAQE---------------TEAY--ALRGPELLVLSVLKCGPDGETNGEPGTGRVPSLFANHGFQVLGQTLSRLARRNIAQAWKAELKAREYESSLLKELEAEQGGA 436
BLAST of mRNA_P-fluviatile_contig81.14791.1 vs. uniprot
Match: A0A835ZFQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFQ4_9STRA) HSP 1 Score: 123 bits (309), Expect = 1.560e-24 Identity = 91/311 (29.26%), Postives = 145/311 (46.62%), Query Frame = 1
Query: 79 GLSEFWSCLDPKQRDSLLTINGRAVREALDCELCRDLVRSATFALEEE----TKVGMEPPXXXXXXXXXXXXXXXXXXXXXXXXXQGQPSKLR--------RKPRASG--LRVIGDQAFMADWVGWPELQQRWPCYAKYLAGVFVLQPSEVLNRSLAEM-----ADID------------------EPWEAVAREPERGCYCKGKMILSVVDMLTYPRPVRKFEVLINKGISVQSLRELMLVNVKLESLPKLVLLTKGRPIGHDKDGFTLAELGFRNRQKVVVSQVLGGPTTEDSGTEEKNRQFVGDLLFG 900
GL +FW CL+ QR++LL+I ++ + + C CRDL+ SA L+++ + G + P L+ +P AS +G ++ D+V + P A +G F + L R+++ + A + + AV P YC+GK+ + VD LTYPRP RKF +L+++ + + +LRE+M L+S +LVLL +GRP+ +KD TLA+L ++ + +S+ LG ED G +EKN+QFVGDLLFG
Sbjct: 20 GLRQFWDCLERPQREALLSIGSDSLIDTVHCAGCRDLLASAIKNLDDDAWGKSPHGHDAPPPPSARGYVKDTRALAKKSGGFVTLPATTMLLKLLEDGVFVSEPAASDDLSAGVGSKSNALDFVHYTA-----PPPAGGASGHFQVLQGAYLQRAISSIDTAVGASLQTSAAAAGNGVGQQLLLKAQQAPAVVPPPPSCPYCQGKLNVRFVDTLTYPRPARKFRLLLDRSMLLGALREMMAAEAGLDSAAQLVLLYRGRPVPREKDYMTLADLDVKSNGMIAISRTLGASVEED-GADEKNKQFVGDLLFG 324
BLAST of mRNA_P-fluviatile_contig81.14791.1 vs. uniprot
Match: A0A4D9CSN0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSN0_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 7.390e-14 Identity = 69/190 (36.32%), Postives = 95/190 (50.00%), Query Frame = 1
Query: 442 YAKYLAGVFVLQPSEVLNRSLA------------EMADIDEPW-----------EAVAREPERG---C-YCKGKMILSVVDMLTYPRPVRKFEVLINKGISVQSLRELMLVNVKLESLPKLVLLTKGRPI--------GHDKDGFTLAELGFRNRQKVVVSQVLGGPTTED--SGTEEKNRQFVGDLLFG 900
Y + G F L PS+ L L E A + P + V RE E+ C +C K+ + VDMLTYPRPVRKF +L++K + + SLRE++ V LE L + + R + G ++D TL +G R+ +VVVS+VLGG E +G KN+QFVGDLLFG
Sbjct: 203 YTSFQNGSFDLLPSQALEALLLDEERGEEGGGEREKAGSESPLGRARRRPRSAGDGVGREGEKEDLPCPFCADKVFVRFVDMLTYPRPVRKFSMLLSKRMRIGSLREMLWREVGLEKEALLEIRIRNRRLTAGQGDAGGGEED--TLEAVGIRDGVQVVVSKVLGGDGEEGDRAGVNAKNKQFVGDLLFG 390
BLAST of mRNA_P-fluviatile_contig81.14791.1 vs. uniprot
Match: A0A7S2RBA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBA8_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 5.290e-6 Identity = 29/62 (46.77%), Postives = 46/62 (74.19%), Query Frame = 1
Query: 568 YCKGKMILSVVDMLTYPRPVRKFEVLINKGISVQSLRELMLVNVKL-ESLPKLVLLTKGRPI 750
YC+ K+ L VDMLTYPRP+R+F +LIN + + SLR+L+ + V + +S +LV+L +G+P+
Sbjct: 201 YCRDKLRLRFVDMLTYPRPIRQFWMLINGDMRLGSLRDLLAIEVNMSDSAEELVMLLRGKPL 262 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig81.14791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig81.14791.1 >prot_P-fluviatile_contig81.14791.1 ID=prot_P-fluviatile_contig81.14791.1|Name=mRNA_P-fluviatile_contig81.14791.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=900bp MCSSEPGKGGVRGGRGGGRHGGGGLGGLSEFWSCLDPKQRDSLLTINGRAback to top mRNA from alignment at P-fluviatile_contig81:399029..415082+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig81.14791.1 ID=mRNA_P-fluviatile_contig81.14791.1|Name=mRNA_P-fluviatile_contig81.14791.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=16054bp|location=Sequence derived from alignment at P-fluviatile_contig81:399029..415082+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig81:399029..415082+ >mRNA_P-fluviatile_contig81.14791.1 ID=mRNA_P-fluviatile_contig81.14791.1|Name=mRNA_P-fluviatile_contig81.14791.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=5400bp|location=Sequence derived from alignment at P-fluviatile_contig81:399029..415082+ (Porterinema fluviatile SAG_2381)back to top |