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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 502 |
| Cds size | 501 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622817274.2485275-CDS-P-fluviatile_contig81:351692..352079 | 1622817274.2485275-CDS-P-fluviatile_contig81:351692..352079 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig81 351693..352079 - |
| 1693571876.0846932-CDS-P-fluviatile_contig81:351692..352079 | 1693571876.0846932-CDS-P-fluviatile_contig81:351692..352079 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig81 351693..352079 - |
| 1622817274.2587757-CDS-P-fluviatile_contig81:353802..353916 | 1622817274.2587757-CDS-P-fluviatile_contig81:353802..353916 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig81 353803..353916 - |
| 1693571876.2169948-CDS-P-fluviatile_contig81:353802..353916 | 1693571876.2169948-CDS-P-fluviatile_contig81:353802..353916 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig81 353803..353916 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig81.14787.1 >prot_P-fluviatile_contig81.14787.1 ID=prot_P-fluviatile_contig81.14787.1|Name=mRNA_P-fluviatile_contig81.14787.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=167bp
MSVANAANTTATMHLTPSLPRWILIFWGSSSRLLNSSQTPPTAVEEKHHH
PFGHQGAAGVEKEAVAADAAAIGAAAARAVRFTRSCDVSGGKLGVTSSAA
AGVVRVTRSCGTSGGKLGVSAEAAAGVVRRDTGSCGGGGGKRGPGRRPGR
RNPRLAAEEQHRQRRGG back to topmRNA from alignment at P-fluviatile_contig81:351693..353916- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig81.14787.1 ID=mRNA_P-fluviatile_contig81.14787.1|Name=mRNA_P-fluviatile_contig81.14787.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2224bp|location=Sequence derived from alignment at P-fluviatile_contig81:351693..353916- (Porterinema fluviatile SAG_2381)
ATGTCAGTGGCGAACGCGGCCAACACAACGGCGACCATGCATTTGACACC
GTCGCTGCCGCGATGGATCCTAATTTTCTGGGGTTCATCCTCTCGGCTTC
TCAATTCTTCACAGGTGTGTGGTTTTTGCTCGTCGACAGGTTTTCGCTTG
ATTGAGAACGAACCTTTCAAACCCTTTGACTCTCTCGTTGTGTTGCATGA
CGGTCTCCCTCTTCCATTCCTTGCTGTCACTTCGTGTCCCTGGCTCTCTC
TCCGCGAACGGCGTGCTGACCTGTCTGATCACCTTACCGGCTAGCTTTGG
ACAATAACCTTCTCGAGCTGAGAGGCTCGGCTTTGTCACTACCGAAGCGA
CGCACAGAGAACCGATCTATCCTAGTTCTCAAGCCGTGTGGTTGCCATCG
TCAACTCACGAACACGCTCAGACAATCCCGCACGTTTTTGCATCGACACC
TGCGGTAAGGGATTCGACGCTATTTCCGATAAGCAAAACGGCGACCCTGA
CCTAGCTTCGAACTATAACACGCACATGCACGACCCCCACGACTCCTTCG
TTGAGCGCTCGCTCTCTCAGAAAGCCAGTTGCCGTGAACCATTCCCTTCC
TAGAAATGTCCGCCTTCCCGCTTTTGGGAACACATTGCGGCGAAATGAAA
TTACACGCGTGCCCCGTCCCTCTCTTGTCTCTGTCTGAAGTCTGAAAAAC
GTCAATCAGAGCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGTCT
GTCTCTCGCTCTCCTCTCTCTCTCTCTGGTTGTCTACGTCTACTACAAGT
CCATTACGCAAGGCCGGGGATGTCGTCTGAGCATTTTTCTATCCCAAAGT
GCTGAACTCTTCCCGGTTAAAATTGAAGGCATGAAGCGTAGGATGGGGGG
TTGGGGCCGTGGGGGGAGGAGACCTTCTGTGTGACCACGGATCAGAGTTC
TGGGCGTAGGCCTCTAGGAGCGATGGCTTGATGTGATGAGAAATTGAACA
ACAAAATAAACAATCAAATGGTCACCTCGGATACCCCACTCCCCCTAGAG
GGCCGGAAAATCCGCGGCTCCAGCAGACAGATGGTGTTACACGAGGGAAT
CCCCAGGTCCCCGATCGTAAGAGAGCCGATGGCAAAGGGAACCTTTTACG
CGGCGATGCTGGTTTGGTTTGGATATGGGAACGCGCGAGCCTGCCGCCGG
GGCTAGAATGTGATAAGCACGCGCCGTCCAGTTAGATGAAGTCGCGGGAG
CGGCTTTCGCGACGCCCGGAGAAGCATCTTTCACGAAACCCGGGGCTTTA
CACCTTCGTGTGAATTCCAGCCCCAAGAAATCCTCGCGTCGGTTGTAGCA
TCGCGGCCCACATGACAATAAGTACGTATTGCCGTCGTCATCGTGGCCAC
CGCCGCCGCCGTAGCTGCTGGTGCTGCTATCACGCCGCAAGATTGTCCGA
TAGCCATGACCCGACCGCATGAACTCTCTCCCCCTCGGCTCTTCTTCTCC
TTCTCCTTCTCCTTCTCCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT
TCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CTTCTTCCTTCTTGGGCGTTCGTTTCTTCATATATATTTTTTTTCTCACC
CATCTCCTCATGCTGCTACTGCTTCTGTTGCGGCCAGACACCCCCGACAG
CAGTGGAGGAAAAGCACCATCACCCGTTCGGTCACCAAGGAGCAGCAGGC
GTGGAAAAGGAGGCGGTGGCAGCTGATGCGGCAGCGATAGGTGCGGCCGC
AGCAAGAGCGGTGAGGTTCACCCGCAGTTGCGATGTCAGCGGCGGCAAGC
TAGGGGTTACGTCATCCGCAGCAGCAGGAGTAGTTAGGGTCACCCGCAGT
TGCGGCACCAGCGGCGGTAAGTTGGGGGTTTCAGCAGAAGCAGCAGCGGG
AGTGGTGAGGAGGGACACCGGCAGTTGCGGCGGCGGCGGCGGCAAGCGGG
GACCGGGCAGGAGACCGGGGAGGAGAAACCCCCGGCTTGCAGCAGAGGAG
CAGCATCGGCAGCGCCGGGGCGGG back to topCoding sequence (CDS) from alignment at P-fluviatile_contig81:351693..353916- >mRNA_P-fluviatile_contig81.14787.1 ID=mRNA_P-fluviatile_contig81.14787.1|Name=mRNA_P-fluviatile_contig81.14787.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1002bp|location=Sequence derived from alignment at P-fluviatile_contig81:351693..353916- (Porterinema fluviatile SAG_2381)
ATGTCAGTGGCGAACGCGGCCAACACAACGGCGACCATGCATTTGACACC
GTCGCTGCCGCGATGGATCCTAATTTTCTGGGGTTCATCCTCTCGGCTTC
TCAATTCTTCACAGATGTCAGTGGCGAACGCGGCCAACACAACGGCGACC
ATGCATTTGACACCGTCGCTGCCGCGATGGATCCTAATTTTCTGGGGTTC
ATCCTCTCGGCTTCTCAATTCTTCACAGACACCCCCGACAGCAGTGGAGG
AAAAGCACCATCACCCGTTCGGTCACCAAGGAGCAGCAGGCGTGGAAAAG
GAGGCGGTGGCAGCTGATGCGGCAGCGATAGGTGCGGCCGCAGCAAGAGC
GGTGAGGTTCACCCGCAGTTGCGATGTCAGCGGCGGCAAGCTAGGGGTTA
CGTCATCCGCAGCAGCAGGAGTAGTTAGGGTCACCCGCAGTTGCGGCACC
AGCGGCGGTAAGTTGGGGGTTTCAGCAGAAGCAGCAGCGGGAGTGGTGAG
GAGGGACACCGGCAGTTGCGGCGGCGGCGGCGGCAAGCGGGGACCGGGCA
GGAGACCGGGGAGGAGAAACCCCCGGCTTGCAGCAGAGGAGCAGCATCGG
CAGCGCCGGGGCGGGACACCCCCGACAGCAGTGGAGGAAAAGCACCATCA
CCCGTTCGGTCACCAAGGAGCAGCAGGCGTGGAAAAGGAGGCGGTGGCAG
CTGATGCGGCAGCGATAGGTGCGGCCGCAGCAAGAGCGGTGAGGTTCACC
CGCAGTTGCGATGTCAGCGGCGGCAAGCTAGGGGTTACGTCATCCGCAGC
AGCAGGAGTAGTTAGGGTCACCCGCAGTTGCGGCACCAGCGGCGGTAAGT
TGGGGGTTTCAGCAGAAGCAGCAGCGGGAGTGGTGAGGAGGGACACCGGC
AGTTGCGGCGGCGGCGGCGGCAAGCGGGGACCGGGCAGGAGACCGGGGAG
GAGAAACCCCCGGCTTGCAGCAGAGGAGCAGCATCGGCAGCGCCGGGGCG
GG back to top
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