mRNA_P-fluviatile_contig81.14785.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Match: D7G392_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G392_ECTSI) HSP 1 Score: 281 bits (720), Expect = 1.190e-74 Identity = 156/281 (55.52%), Postives = 203/281 (72.24%), Query Frame = 2
Query: 119 AGRKRKSCVLYMGMSRLPEVSA---LFEG-RPFEAVERTVRDRVTDANRNPMRDTARVCAMESLGPQVRCVGKGCTS-----QDFHDGRKPDSPN----FLSADITNTCSTSRGFLQQIKETFGPVKFDRVFLDYFWMPDSVVWLNRSYMANNGGLVTNLVRMTEVDTRLLRDDFEIILPVNRAILGLLLPRFEELDKHFTVKFLVGKGPEDLKESHLALQADSLIPEEIMQEVYGKGRNRQVMDMLGVENPTQEMTAVLLKYGVAAERLRHARFLKLTRH 922
A RKR+ VL++GM+R+ E + L +G + F+ VER VRD V +AN NP+RDTARV AME+LG +VRC+ K T ++ R P FL+ DITNT SRGFL++I+E + + FD V LD++W+PDSVVWLN+ YMAN+GGL+ NLVRMT+ T+LL DDFEI+LP+N+A LLLP F +L++HFTV+FLVG+ E LK SHLAL+AD LIPE++MQ VYGK RQV MLGV+ PT ++ AVLLKYGVAAE +ARFLKL+R+
Sbjct: 1090 ARRKRRLNVLFLGMTRVAEYDSRGGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNT-GASRGFLRKIEEKWEKITFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTK--TQLLGDDFEIMLPINQAFFELLLPHFSDLERHFTVEFLVGERLEHLKRSHLALEADDLIPEDVMQHVYGKEPERQVSRMLGVKQPTADVAAVLLKYGVAAEHFCYARFLKLSRN 1367
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Match: A0A6H5K5F0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F0_9PHAE) HSP 1 Score: 250 bits (638), Expect = 1.540e-66 Identity = 140/274 (51.09%), Postives = 186/274 (67.88%), Query Frame = 2
Query: 125 RKRKSCVLYMGMSRLPEVSALFEG------RPFEAVERTVRDRVTDANRNPMRDTARVCAMESLGPQVRCVGKGCTSQ---DFHDGRKPDSPNFLSADITNTCSTSRGFLQQIKETFGPVKFDRVFLDYFWMPDSVVWLNRSYMANNGGLVTNLVRMTEVDTRLLRDDFEIILPVNRAILGLLLPRFEELDKHFTVKFLVGKGPEDLKESHLALQADSLIPEEIMQEVYGKGRNRQVMDMLGVENPTQEMTAVLLKYGVAAERLRHARFLKLTR 919
RKR L++G++ + E A F G R F+ +E+ +R++VT+ N NP+RDT RV A E+ G +V CV K S+ GR + L D++NT + SRG L+ K +G VKF++V LD+FW+PDS WLN++YMAN+GGL+ NL+ MT+ +TRLL DDFE+ILP+NR L LLLP F ELDKHFTV FLVG+G DLK+SHLALQA LIP++IM VYGK + RQ + +LGV+ PTQEM VL +GV HARFL+LT+
Sbjct: 431 RKR---ALFLGVTFVEEHDAEFLGELAKRVRRFKTLEKKLRNKVTEGNMNPLRDTIRVLATETQGYRVSCVSKVSVSRGPGSSAKGRPVSRRHLLETDMSNT-TASRGLLRSGK--WGDVKFEKVLLDHFWLPDSETWLNKNYMANDGGLIRNLISMTKPETRLLSDDFEVILPINRGFLELLLPHFSELDKHFTVAFLVGQGLNDLKKSHLALQAGDLIPDDIMMGVYGKNKERQ-LSILGVKEPTQEMVKVLRNHGVEPWNFCHARFLRLTK 697
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Match: D8LN97_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN97_ECTSI) HSP 1 Score: 224 bits (571), Expect = 3.180e-58 Identity = 118/233 (50.64%), Postives = 160/233 (68.67%), Query Frame = 2
Query: 146 LYMGMSRLPEVSALFEG------RPFEAVERTVRDRVTDANRNPMRDTARVCAMESLGPQVRCVGKGCTSQ----DFHDGRKPDSPNFLSADITNTCSTSRGFLQQIKETFGPVKFDRVFLDYFWMPDSVVWLNRSYMANNGGLVTNLVRMTEVDTRLLRDDFEIILPVNRAILGLLLPRFEELDKHFTVKFLVGKGPEDLKESHLALQADSLIPEEIMQEVYGKGRNRQVMD 814
L++G++ + E A F G R F+ +E+ +R++VT+ N NP+RDT RV A E+ G +V CV K S+ GR + L D++NT + SRG L+ +K +G VKF++V LD+FW+PDS WLN++YMAN+GGL+ NL+ MT+ +TRLL DDFE+ILP+NR L LLLP F +LDKHFTV FLVG+G DLK+SHLALQA LIP++IM VYGK + RQ D
Sbjct: 435 LFLGVTFVEEHDAEFLGERAKRVRRFKTLEKKLRNKVTEGNMNPLRDTVRVLATETQGYRVSCVSKVSVSRGPGSSAAKGRPASRRHLLETDMSNT-TASRGLLRSVKGKWGDVKFEKVLLDHFWLPDSETWLNKNYMANDGGLIRNLISMTKPETRLLSDDFEVILPINRGFLELLLPHFSKLDKHFTVAFLVGQGLNDLKKSHLALQAGDLIPDDIMMGVYGKNKERQDPD 666
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Match: A0A835YWD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD2_9STRA) HSP 1 Score: 167 bits (423), Expect = 1.020e-42 Identity = 99/247 (40.08%), Postives = 141/247 (57.09%), Query Frame = 2
Query: 203 FEAVERTVRDRVTDANRNPMRDTARVCAMESLGPQVRCVG---KGCTSQDFHDGRKPDSPNFLSADITNTCSTSRGFLQQIKETFGPVKFDRVFLDYFWMPDSVVWLNRSYMANNGGLVTNLVRMTEVDTRLLRDDFEIILPVNRAILGLLLPRFEELDKHFTVKFLVGKGPEDLKESHLALQADSLIPEEIMQEVYGKGRNRQVMDMLGVENPTQEMTAVLLKYGVAAERL------RHARFLKLT 916
FEA E +R V+D N N MRDTAR+ A+ESLG V V + + DG P FL+ S SRGF++ + + V F V+LDY+W+PDSV WL + YMANN G++ NL++M E+ +L F+++LPVN A++ L P ++L +F V F+ G E ++ HLA+QADSLIP +M VY K + RQ+ DMLG++ +LK V+ L + RFL+LT
Sbjct: 13 FEAAEAEIRHAVSDCNCNLMRDTARILALESLGCDVFAVSLVDELAWERIVPDGGADTGPRFLNTSFATVGSRSRGFVECVLLKWPNVIFQSVYLDYYWLPDSVAWLQKGYMANNAGVIDNLIKMKEIG--ILARGFDVVLPVNTALVQCLEPLVKKLRANFAVHFISG-DTEAIRPHHLAVQADSLIPPHVMSGVYCKNQQRQIDDMLGIKGSAAARALTILKRLVSGRTLARTPDLQDVRFLRLT 256
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Match: A0A6H5LE14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE14_9PHAE) HSP 1 Score: 136 bits (343), Expect = 9.240e-29 Identity = 97/255 (38.04%), Postives = 129/255 (50.59%), Query Frame = 2
Query: 119 AGRKRKSCVLYMGMSRLPEVSA---LFEG-RPFEAVERTVRDRVTDANRNPMRDTARVCAMESLGPQVRCVGKGCTS-----QDFHDGRKPDSPN----FLSADITNTCSTSRGFLQQIKETF---------------GP--------------------------------------------------------VKFDRVFLDYFWMPDSVVWLNRSYMANNGGLVTNLVRMTEVDTRLLRDDFEIILPVNRA 631
A RKR+ VL++GM+R+ E + L +G + F+ VER VRD V +AN NP+RDTARV AME+LG +VRC+ K T ++ R P FL+ DITNT SRGFL++I+ ++ GP V FD V LD++W+PDSVVWLN+ YMAN+GGL+ NLVRMT+ T+LL DDFEIILP+N+
Sbjct: 1089 ARRKRRLNVLFLGMTRVAEYDSRGGLTKGMKRFDLVERMVRDDVNEANMNPLRDTARVLAMEALGHEVRCISKVSTPGESDCENSRSTRAHGGPTGLGRFLATDITNT-GASRGFLRKIEASYSLLLVVGRIAVIIRPGPCCQPIPGSVSPIFQDEHDPGADDKREVFARRHCVDGMYTACLVWALCTDVQEKWENVTFDTVLLDHYWLPDSVVWLNKGYMANDGGLIQNLVRMTK--TQLLSDDFEIILPINQG 1340
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Match: A0A6H5KX64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX64_9PHAE) HSP 1 Score: 108 bits (269), Expect = 4.770e-23 Identity = 55/84 (65.48%), Postives = 67/84 (79.76%), Query Frame = 2
Query: 671 KHFTVKFLVGKGPEDLKESHLALQADSLIPEEIMQEVYGKGRNRQVMDMLGVENPTQEMTAVLLKYGVAAERLRHARFLKLTRH 922
+HFTV+FLVG+ E LK SHLAL+AD LIPE++MQ VYGK RQV MLGV+ PT ++ AVLLKYGVAAE +ARFLKL+R+
Sbjct: 8 RHFTVEFLVGERLEHLKRSHLALEADDLIPEDVMQHVYGKEPERQVSRMLGVKQPTADVAAVLLKYGVAAEHFCYARFLKLSRN 91 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig81.14785.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig81.14785.1 >prot_P-fluviatile_contig81.14785.1 ID=prot_P-fluviatile_contig81.14785.1|Name=mRNA_P-fluviatile_contig81.14785.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=316bp MGMSRLPEVSALFEGRPFEAVERTVRDRVTDANRNPMRDTARVCAMESLGback to top mRNA from alignment at P-fluviatile_contig81:340315..351681- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig81.14785.1 ID=mRNA_P-fluviatile_contig81.14785.1|Name=mRNA_P-fluviatile_contig81.14785.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11367bp|location=Sequence derived from alignment at P-fluviatile_contig81:340315..351681- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig81:340315..351681- >mRNA_P-fluviatile_contig81.14785.1 ID=mRNA_P-fluviatile_contig81.14785.1|Name=mRNA_P-fluviatile_contig81.14785.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1896bp|location=Sequence derived from alignment at P-fluviatile_contig81:340315..351681- (Porterinema fluviatile SAG_2381)back to top |