mRNA_P-fluviatile_contig80.14746.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: D7FPX3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPX3_ECTSI) HSP 1 Score: 632 bits (1629), Expect = 9.820e-212 Identity = 347/639 (54.30%), Postives = 416/639 (65.10%), Query Frame = 2
Query: 638 EPGRMIEEMDEEWAEHASAPAPPGAVLANARAVYSDLSDEILSRWGQRYANTPLFSGGMKFSDGGKVVEDKFLDAVVAQRGFLASFTGVSTTAAHDCLYEQSYPVLLNETLGKLLGAAGVEFQAINVAMGNTRVAPYSWCVDAHAGLDADIISWDMTMMLGRNDCGRSAAGVELFIRSACVLPKRPAVLLTDASPNQDLCTDGHLRQVEKIDQGLSGGCIPDRDLFKVYRDFGLHQISPRSLVPKVTCGDDVFARARLYNNTEKDFPRPVGWHAGPTGHLLLGDMLFMHYADVFLKALERLDALRPGITAAGLRQQSLIYRGGANGLRKSLGLEVDSTSNA-------SRVGGSRSGEASVS--MGGXXXXXXPPPSWCKGWRFCEWAGSYRCATTYFPLAGKEGSRLLDMVTESTPAVGNRNHSEHFVEPPEGSWAVTLNEEAMSIKEYLKASPPEGYHHPIDMKWVLVGDKGSGPIAFEFETFGTKMMRGSRKRLAAVVVEG------------GDEVEVVRSGETEGSTSDGQGDDAATTETAMKPKDKEAQFDSRITVCKPDFIDRVAFNESSEVRFSVDGVPV-STVELVQLGLHPQSCVLLDMEVGLGRHFLKVEPLRAGEPFVAISHVLYPA 2488
+P IE MDE W +HAS PPGAVL NAR+VYS++S +IL+RWG +YANTPLFSGGMKFSDGGKVVE+K L+AVV Q GFLA+FTGVSTTA HDCL+EQSYPVLLNET G+L+ A GV+F+AINVAMGNTRVAPYS+CV+AHAGL+AD+ISWDMT+M+ N+CG++AAG+ELF+RSA VLPKRP VLL DA+PNQD+CT+GHLRQ++K+D G WHAGPTGHLL+ DMLFM YA+VFL+ALERL+ ++PGITAAGLRQ + + G L +SLGL+ ++A + S+SG + MGG PPPSWCKG+RFC+ AGSYR SE+FVEP +G WAVTLNEEA SIK+YLK SPP G+HHPID KWVLVGD +GPI FEFET G G +R A V EG G E S S+ G DA T +P + FDSR+TVCKPDFIDRV FNE+S VRFSVDG+ V +TVELVQ+GLH QSC LLD+ VG+GRH +KVEPL+ GEP+VAISHVLYPA
Sbjct: 141 DPIAEIEGMDEHWTQHASVAQPPGAVLENARSVYSEISSDILTRWGYKYANTPLFSGGMKFSDGGKVVENKMLNAVVEQEGFLAAFTGVSTTAGHDCLFEQSYPVLLNETFGRLMAATGVKFEAINVAMGNTRVAPYSYCVEAHAGLEADLISWDMTLMVASNECGKAAAGIELFVRSATVLPKRPVVLLMDATPNQDVCTNGHLRQIKKLDDG---------------------------------------------------------WHAGPTGHLLVADMLFMAYAEVFLRALERLNGVKPGITAAGLRQLNALSANGRLNLWESLGLDGGGATDARPDLHGEATAADSQSGSNNYPAFMGGGRGDILPPPSWCKGYRFCQGAGSYR--------------------------------SEYFVEPSQGHWAVTLNEEAQSIKDYLKVSPPRGFHHPIDYKWVLVGDAAAGPIEFEFETLGIPPA-GRHRRRRAKVEEGEEEDAHTFSSSAGREEPAPESAGANEEFSNSAGIDAEKT----RPTEDATDFDSRVTVCKPDFIDRVQFNETSGVRFSVDGIQVETTVELVQVGLHVQSCALLDVAVGVGRHTVKVEPLKVGEPYVAISHVLYPA 685
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: D8LSB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSB3_ECTSI) HSP 1 Score: 336 bits (862), Expect = 4.160e-102 Identity = 191/418 (45.69%), Postives = 247/418 (59.09%), Query Frame = 2
Query: 1316 KVYRDFGLHQISPRSLVPKVTCGDDVFARARLYNNTEKDFPRPVGWHAGPTGHLLLGDMLFMHYADVFLKALERLDALRPGITAAGLRQQS-LIYRGGA----------------NGLRKSLGLEVDSTSNASRVGGSRSGEASVSMGGXXXXXXPPPSWCKGWRFCEWAGSYRCATTYFPLAGKEGSRLLDMVTESTPAVGNRNHSEHFVEPPEGSWAVTLNEEAMSIKEYLKASPPEGYHHPIDMKWVLVGDKGSGPIAFEFETFGTKM-MRG--SRKRLAAVVVEGGDEVEVVRSGETEGSTSDGQGDDAATTET----AMKPKDKEAQF---DSRITVCKPDFIDRVAFNESSEVRFSVDGVPVSTVELVQLGLHPQSCVLLDMEVGLGRHFLKVEPLRAGEPFVAISHVLYPA 2488
+VYR+FGLH+++P SLVP+ TCG++VF RLYN + KD PRP WHAGP GH L+ DMLFMHYA+VFLKA+ RL+ + PG+TA LR I G A LR++LGL V++ + +V MGG PPP+WC GWRFC AGSYRCA TYFP A +G+RL+ MV+ +PA+ N +H E EP G WA+TLNEE+ + +YLK PPEG+HHPID+K VLVGD SG I FEFET G G S + D E + G D E AM+ + ++ DSR+ +CKPDFI RV F +S++V F VDGV EL Q + SCV+L+ +VG+GRH + VEPL +G P+VA+SH+LYPA
Sbjct: 2 EVYREFGLHRMTPSSLVPENTCGNEVFDYHRLYNASLKDIPRPSSWHAGPPGHQLVADMLFMHYAEVFLKAVGRLEDVAPGVTARQLRDSGGEIIPGDAAVSSSERETRESIRDLTSLRETLGLVVEAVDD----------NDNVYMGGGRGDILPPPAWCAGWRFCLGAGSYRCANTYFPQAAGKGARLVGMVSAKSPAILNLDHKEMIAEPTSGHWAMTLNEESERLLDYLKTFPPEGFHHPIDLKLVLVGDAASGAIEFEFETIGVPAGTEGWLSEEXXXXXXXXXDDRAEELVDGNXXXXXXXXXXXDEKQEEAGSHRAMQDQLQQMNSMSQDSRVVICKPDFITRVDFTDSTQVTFRVDGVVAIAEELEQGFMTQGSCVILETDVGVGRHTVSVEPLHSGAPYVAVSHLLYPA 409
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: A0A6H5JNP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNP8_9PHAE) HSP 1 Score: 299 bits (766), Expect = 1.210e-86 Identity = 209/552 (37.86%), Postives = 273/552 (49.46%), Query Frame = 2
Query: 1130 CGRSAAGVELFIRSACVLPKRPAVLLTDASPNQDLCTDGHLRQVEKIDQGLSGGCI-PDRDLFKVYRDFGLHQISPRSLVPKVTCGDDVFARARLYNNTEKDFPRPVGWHAGPTGHLLLGDMLFMHYADVFLKALERLDALRPGITAAGLRQQ------------SLIYRGGANG---------LRKSLGLEVDSTS-------NASRVGGSRSGEASVSM---------GGXXXXXXPPPSWCKGWRFCEWAGSYRCATTYFPLAGKEGSRLLDMVTESTPAVG----------------NRNHSEHFVEPPEGSWAVTLNEEAMSIKEYL-KASPPEGYHHPIDMKWVLVGDKGSGPIAFEFETFGTKMMRGSRK----------------RLAAVVVEG----------------------------GDEVEVVRSGETEGSTSDGQGDDAATTETAMKPKDKEAQFDSRITVCKPDFIDRVAFNESSEVRFSVDGVPVSTVELVQLGLHPQSCVLLDMEVGLGRHFLKVEPLRAGEPFVAISHVLYPA 2488
C ++AA VELFIRS+ VLP+RPA+L+ DA +Q G L+ ++ ++ G C P +L YRDFG+H I SL+ + GD+ FA LY K +PRP+ WH P GH L+ DMLFMHY +FL+A++ L+ PG+TAA LR++ S + G + LR+++GL D+ + + +R GG E+ + GG P WC G C+ AG+YRCA TY+PL G +GSRLLDMV + G NR+ + P EG WAVTLNE + +Y+ PEGYH PID+KWVLVGD SGPI FEF T G + + K A V+G G +V V+ G E + + AA T + DSR+ VCKPDFIDRV F + V FS+DGV S V + GL +SC LL EVG GRH LKV PLR GEPFVAISHV+YPA
Sbjct: 8 CEKAAAAVELFIRSSLVLPRRPAILVLDAQADQG--AKGRLKLLKHRNRRFLGYCGGPKPNLMDAYRDFGVHNIFASSLILEYAAGDERFAHEVLYA-AGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAIDLLEQASPGLTAAELREKKEQQGQQPQQERSREHDGSGSSDHGTISMKALREAVGLAGDNPNVFVRRPDDKARRGGGEGEESPIRPPPTECSYMGGGRGRGVLPLAEWCSG-AHCQGAGNYRCANTYYPLEGNQGSRLLDMVVSDSDGEGEGGGENGDPGNPVGLFNRDEEKLRASPSEGRWAVTLNEVSRPAIDYMMNGRAPEGYHKPIDVKWVLVGDADSGPIEFEFFTGGVPLDKAIDKVTTRSEAXXXXXXXXXXXVATGVQGVEGAAIHXXXXXXXXXXXXXXXTAVAPVGGQVGVLPLGPVEAAAA------AALAGTKV--------VDSRVVVCKPDFIDRVDFADPGGVVFSIDGVETSVVPAEEDGLMTKSCSLLAAEVGPGRHRLKVVPLRRGEPFVAISHVIYPA 541
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: D7FUH4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH4_ECTSI) HSP 1 Score: 256 bits (654), Expect = 1.730e-72 Identity = 156/377 (41.38%), Postives = 202/377 (53.58%), Query Frame = 2
Query: 968 LGKLLGAAGVEFQAINVAMGNTRVAPYSWCVDAHAGLDADIISWDMTMMLGRNDCGRSAAGVELFIRSACVLPKRPAVLLTDASPNQDLCTDGHLRQVEKIDQGLSGGCI-PDRDLFKVYRDFGLHQISPRSLVPKVTCGDDVFARARLYNNTEKDFPRPVGWHAGPTGHLLLGDMLFMHYADVFLKALERLDALRPGITAAGLR----------QQSLIYRGGANG-----------LRKSLGLEVDSTS-------NASRVGGSRSGE---------ASVSMGGXXXXXXPPPSWCKGWRFCEWAGSYRCATTYFPLAGKEGSRLLDMVTESTPAVG----------------NRNHSEHFVEPPEGSWAVTLNE 1936
+G+L+ AAGV + AINVAMGNTR APYS+CVDAHAGLDADI+SW M + C +AA VELF+RS+ VLP+RPA+L+ DA +Q G L ++ ++ G C P R+L + YRDFG+H I SL+ + GD+ FA LY K +PRP+ WH P GH L+ DMLFMHY +FL+A++ L+ PG+TAA LR QQ G LR+++GL D+ + R GG E S GG PP WC G C+ AG+YRCA TY+PL G +GSRLLDMV + G +R+ + P EG WAVTLNE
Sbjct: 1 MGRLMAAAGVGYTAINVAMGNTRAAPYSYCVDAHAGLDADIVSWSFGMEIATLPCEEAAAAVELFVRSSLVLPRRPAILVLDAQADQG--AKGRLELLKHRNRRFLGYCNGPKRNLMEAYRDFGVHNIFASSLILEHAAGDERFAHEILYA-AGKHYPRPMKWHPAPAGHELVADMLFMHYGKLFLEAIDLLEQASPGLTAAELRDKNEQPGQQPQQEGSRENDGRGSSDHGTISMEALREAVGLARDNPNVFVRRPDGKPRRGGGEGEEPPIRPPPTECSYMAGGRGRGVLPPAEWCSG-AHCQGAGNYRCANTYYPLEGNQGSRLLDMVVSDSDGEGEGGGENGDPGNPVGLFSRDEEKLRASPSEGRWAVTLNE 373
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: A0A836C824_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C824_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.250e-36 Identity = 82/232 (35.34%), Postives = 124/232 (53.45%), Query Frame = 2
Query: 767 RWGQRYANTPLFSGGMKFSDGGKVVEDKFLDAVVAQRGFLASFTGVSTTAAHDCLYEQSYPVLLNETLGKLLGAAGVEFQAINVAMGNTRVAPYSWCVDAHAGLDADIISWDMTMMLGRNDCGRSAAGVELFIRSACVLPKRPAVLLTDASPNQDLCTDGHLRQVEKID-QGLSGGCIPDR--------DLFKVYRDFGLHQISPRSLVPKVTCGDDVFARARLYNNTEKDF 1435
++G++Y++T +G DGG+ V D+ L A+V QR F SFTG+S TA HD + EQ+YP L + AGV+F A N A+GN + PYS+C++AHAG DI+SW+M M + +C + +E +IR+ LP +P ++ +A + C D + G C DR D Y+DFG+H + L+ TCGDD+F LY N + ++
Sbjct: 62 KYGEKYSDTVFANGWHDLPDGGQAVMDRMLGAIVYQRTFHVSFTGISNTAGHDNMKEQAYPWHFETILAPVFARAGVDFTASNGAIGNNDILPYSYCMEAHAGAHPDIVSWEMGMQIEGVECFPKSEYLEYWIRNVIALPSQPIPVVLEAVSKRRWCPGNRELSYSNYDFNQMFGRCWGDRPTDEQRRKDQMDYYKDFGIHALHLDDLLSHTTCGDDLFDEEHLYGNKDAEY 293
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: A0A6H5JJ65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ65_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 1.420e-10 Identity = 30/41 (73.17%), Postives = 35/41 (85.37%), Query Frame = 2
Query: 977 LLGAAGVEFQAINVAMGNTRVAPYSWCVDAHAGLDADIISW 1099
++ A V + AINVAMGNTR APYS+CVDAHAGLDADI+SW
Sbjct: 8 VMPVAEVTYTAINVAMGNTRAAPYSYCVDAHAGLDADIVSW 48
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Match: A0A7S3ZR32_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR32_9STRA) HSP 1 Score: 67.4 bits (163), Expect = 1.140e-7 Identity = 46/146 (31.51%), Postives = 70/146 (47.95%), Query Frame = 2
Query: 881 FLASFTGVSTTAAHDCLYEQSYPVLLNETLGKLLGAAGVEFQAINVAMGNTRVAPYSWCVDAHAGLDADII--SWDMTMMLGRNDCGRSAAG--------VELFIRSACVLPKRPAVLLTDASPNQDLCTDGHLRQVEKIDQGLSG 1288
F+ + G S TA HD ++P +L L K L G+E + N A+G P S CV AG D D++ W+ G +D G A G +E+F+R+A +LP +PAVL + PN G R+ +++ + G
Sbjct: 98 FVVAAFGSSVTAGHDGFGHTAWPAVLGRRLAKELAPLGIEVEVRNQAVGGAEPFPRSLCVGPIAGSDVDLVIREWEYW---GFSD-GLEAPGAHGGEDGAIEIFLRTAFLLPNKPAVLFLNMEPN------GEGRKTQQVRAAMKG 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig80.14746.1 >prot_P-fluviatile_contig80.14746.1 ID=prot_P-fluviatile_contig80.14746.1|Name=mRNA_P-fluviatile_contig80.14746.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=732bp MMRACLSTAVAWAVWCLFGQIARAAALGRAGGRRSGRREEHAIVPRIDHPback to top mRNA from alignment at P-fluviatile_contig80:330833..337979- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig80.14746.1 ID=mRNA_P-fluviatile_contig80.14746.1|Name=mRNA_P-fluviatile_contig80.14746.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7147bp|location=Sequence derived from alignment at P-fluviatile_contig80:330833..337979- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig80:330833..337979- >mRNA_P-fluviatile_contig80.14746.1 ID=mRNA_P-fluviatile_contig80.14746.1|Name=mRNA_P-fluviatile_contig80.14746.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4392bp|location=Sequence derived from alignment at P-fluviatile_contig80:330833..337979- (Porterinema fluviatile SAG_2381)back to top |