mRNA_P-fluviatile_contig80.14739.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: D7FPX9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPX9_ECTSI) HSP 1 Score: 474 bits (1220), Expect = 1.560e-161 Identity = 258/359 (71.87%), Postives = 287/359 (79.94%), Query Frame = 2
Query: 221 MTELLVSLVRNAACVLKSLLPADCVVMQPLMTFPFPAFSLVGGASEQLEMFTGLEGLIGLLQLVGAGFNLCKGVKGLAGGVVMREYIVRWRNALGEYEMSVDGKAKGADALSAVLGRQDAANHRRIIAGICQLIIGTGLLCLSCFSWKLVGIMTTATAVVILEVALAVLLTMGVTGVRRMWTISDKVQDLQKLKPKEAAAAXXXXXXXXTPAVAPPDVDVVELVALHSRNDLG-KWEPDVMVAPTAATLREHMEGMSL--IENAVAGSSSEDYQAIGQAAKMQAMLDAFLILLNVAAFVGYGTIPLDVFFPQRSLLTDWFPPGPTAWWGNFVGDVAWTIEPVTVLLAPYVLLRQAQPKR 1288
M EL +SL+RNAACVLKSLLPA+ +MQPLM FPFP F GGA + LEMFTGLEGLIG+LQL GAGFNLCKG KGLAGGVVM EYIVRWRNAL EY+M V+GKA+G ALS VL RQDAAN+RRIIAGICQL+IGTGL+CL+CFSWKLVGIMTTATAV ILEVALAVLLT+GVTGV RMW IS+KVQ LQ+ KP PA APPD DVVELVA S +D+G KWEPDV V PT ATLR ++ + V ++ QAIGQAAK QA+LDAFLI LNVAAFVGYGTIPLDVFFPQRSLLT W PPGPTAWWGNFVGDVAWTIEP+TV LAPY++LR+AQP +
Sbjct: 1 MVELWISLIRNAACVLKSLLPAEYTMMQPLMAFPFPLFWSGGGAGK-LEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYDMGVEGKARGVAALSVVLKRQDAANNRRIIAGICQLVIGTGLICLTCFSWKLVGIMTTATAVAILEVALAVLLTIGVTGVLRMWAISNKVQRLQQ-KP---------------PAEAPPDADVVELVAPRSGSDMGGKWEPDVRVPPTVATLRTWKACLASRRLSRVVLWKTN---QAIGQAAKKQAVLDAFLISLNVAAFVGYGTIPLDVFFPQRSLLTTWLPPGPTAWWGNFVGDVAWTIEPITVFLAPYLVLRRAQPSK 339
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: A0A6H5JMJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMJ7_9PHAE) HSP 1 Score: 213 bits (542), Expect = 5.900e-63 Identity = 109/138 (78.99%), Postives = 119/138 (86.23%), Query Frame = 2
Query: 221 MTELLVSLVRNAACVLKSLLPADCVVMQPLMTFPFPAFSLVGGASEQLEMFTGLEGLIGLLQLVGAGFNLCKGVKGLAGGVVMREYIVRWRNALGEYEMSVDGKAKGADALSAVLGRQDAANHRRIIAGICQLIIGTG 634
M EL +SL+RNAACVLKSLLPA+ VMQPLM FPFP FS GGA + LEMFTGLEGLIG+LQL GAGFNLCKG KGLAGGVVM EYIVRWRNAL EY+M V+GKA+G ALS VL RQDAAN+RRIIAGICQL+IGTG
Sbjct: 1 MAELWISLIRNAACVLKSLLPAEYTVMQPLMAFPFPLFSSGGGAGK-LEMFTGLEGLIGVLQLAGAGFNLCKGAKGLAGGVVMAEYIVRWRNALAEYDMGVEGKARGVAALSVVLKRQDAANNRRIIAGICQLVIGTG 137
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: A0A835ZBH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBH9_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.010e-28 Identity = 126/391 (32.23%), Postives = 168/391 (42.97%), Query Frame = 2
Query: 227 ELLVSLVRNAACVLKSLLPADCVVMQPLMTFPFPAFSLVGGASEQLEMFTGLEGLIGLLQLVGAGFNLCKGVKGLAGGVVMREYIVRWRNALGEYEMSVDGKAKGAD-----------------------------ALSAVLGRQDAANHRRIIAGICQLIIGTGLLCLSCFSWKLVGIMTTATAVVILEVALAVLLTMGVTGVRRMWTISDKVQDLQKLKPKEAAAAXXXXXXXXTPAVAPPDVDVVELVALHSRNDLGKW---EPDVMVAPTAATLREHMEGMSLIENAVAGSSSEDYQAIGQAAKMQAMLDAFLILLNVAAFVGYGTIPLDVFFPQR---------SLLTDW--FPPGPTA--WWGNFVGDVAWTIEPVTVLLAPYVL 1264
E++++L+RN ACV KSLLP V +P FP F + T L+ I LQLV A + + KG+ GG+ R W G E VD GAD A + +L R+ AA RR++ G QLII G + L+ K + ++ I EVALA LL + + D+++ ++L K AAA AP D +V ELVA R W EP VAPT A R + + V + A L+A L+LLNV AFVGY TIPL F P+ SLL W + PG A WWGN GDVAW++EP +L AP ++
Sbjct: 5 EVVIALLRNCACVAKSLLPHTSPVFEP-----FPGFKAI----------TWLDAFIIALQLVAAVYYVQKGIVSTVGGLKDRANATAWLTVAGP-EKGVDRTGSGADGKPEKKRKPSAADAAAEKDKAAQEAADMAAFAELLRRRKAAGIRRVLVGASQLIIAEGFVALALSGLKYMLFPRLVWSLTITEVALAYLL----------YVMLDEIRVARRLAAKARAAARLRI-------AAPLDTEVAELVA--PRIGQAPWALPEPP-RVAPTRAGARAAATALRAWRDGVPRPRAAXXXXXXX---XXAQLEAVLLLLNVVAFVGYATIPLTYFVPEDWANAAPAPLSLLVGWPLWWPGHEAASWWGNLAGDVAWSVEPALMLAAPLLI 356
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: A0A6S9FG41_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FG41_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 5.300e-19 Identity = 116/373 (31.10%), Postives = 170/373 (45.58%), Query Frame = 2
Query: 233 LVSLVRNAACVLKSLLPADCVVMQPLMTFPFPAFSLVGGASEQLEMFTGLEGLIGLLQLVGAGFNLCKGV--------KGLAGGVVMREYIVRWRNALGEYEMSVDGKAKGADALSAVLGRQDAANHRRIIAGICQLIIGTGLLCLSCFSWKLVGIMTTATAVVILEVALAVLLTMGVTGVRRMWTISDKVQDLQKLKPKEAAAAXXXXXXXXTPAVAPPDVDVVELVALHSRNDLGKWEPDVMVAP-----TAATLREHMEGMSLIENAVAGSSS-------EDYQA--IGQAAKM--QAMLDAFLILLNVAAFVGYGTIPLDVFFPQRSL----LTDWFPPGP-TAWWGNFVGDVAWTIEPVTVLLAPYVL 1264
+VSLVRNA CV KSL+ D P+M PF GG E+ E +E +IGLLQL+G F LC G K + ++E + R + EY + LS L ++ AA ++ GI +L IG G L +S+ ++ ++ ++EV+LAVLL G G+ W S VQ A V P + V L LH D D+ A TAA +R + ++ I+ + + ED++ + +A K+ +A+ A++I LN+ A VGY IPL + P L D +P AWWGN GDVAWT+EP+++L AP +L
Sbjct: 9 VVSLVRNALCVCKSLVAEDHWSRDPIMKAPF-----FGG--EEPEDVLIIEAVIGLLQLMGGVF-LCAGAVKKMLEARKEMTVAFSIQEEMDCTRLSWLEYVL-----------LSDSLDKEKAAKKQKYSEGIHELNIGVGFFFLCAWSFHSCSVVYLMLSLSLVEVSLAVLLWYGGKGIYAAWRNSQDVQ-----------LAYGRRRRQLPHRVNPGNARWVAL-KLHREADT---RLDLAAARGGRERTAAEVRRVAKAITDIDKLLEDGAGIKWTKDLEDHRVEQLVEADKLVAEAVFTAWIIFLNIIAGVGYFFIPLTYYVPDEGTFAYYLWDLWPGHEFLAWWGNLAGDVAWTLEPLSLLAAPALL 347
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: A0A7S2UYI5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYI5_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 6.490e-17 Identity = 75/255 (29.41%), Postives = 119/255 (46.67%), Query Frame = 2
Query: 572 QDAANHRRIIAGICQLIIGTGLLCLSCFSWKLVGIMTTATAVVILEVALAVLLTMGVTGV---------RRMWTISDKVQDLQKLKPKEAA-AAXXXXXXXXTPAVAPPDVDVVELVALHSRNDLGKWEPDVMVAPTAATLREHMEGMSLIENAVAGSSSEDYQAIGQAAKMQAMLDAFLILLNVAAFVGYGTIPLDVFFPQRSLLTDWFP---PGPT--AWWGNFVGDVAWTIEPVTVLLAPYVLLRQAQPKRK 1291
Q + + ++ + +LIIG G L FS+ ++ ++ A+ LEVALAVLL G+ G+ + M ++VQ + P + A +D +++A R E MV +H+ + + A+A S + Y+AI LD + LLN+ A +GY IPL F+P+ + +WF PG AW+GN GD+AWTIEP T++ PY+L++ A K K
Sbjct: 43 QKCESTKIVLVCLSKLIIGAGFFALMAFSYNVLSVLYVVIALTCLEVALAVLLYYGLFGLIDAARELKTKAMAYGDNRVQLPSNVNPSNISWVALKLHKGDEYTVKLDASMDQEQILAEFDRASKATDEIVKMVQSGHIVEWDHV--VEDRKKAIAESDVKFYRAI---------LDVWGFLLNIIAGIGYAMIPLTYFYPEENAFIEWFYGFWPGHANAAWYGNLAGDIAWTIEPFTIIFTPYILVKLAATKVK 286
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: A0A7S2MNU7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MNU7_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 4.140e-15 Identity = 100/366 (27.32%), Postives = 155/366 (42.35%), Query Frame = 2
Query: 227 ELLVSLVRNAACVLKSLLPADCVVMQPLMTF--PFPAFSLVGGASEQLEMFTGLEGLIGLLQLVGAGFNLCKGVKGLAGGVVMREYIVRWRNALGEYEMSVDGKAKGADALSAVLGRQDAANHRRIIAGICQLIIGTGLLCLSCFSWKLVGIMTTATAVVILEVALAVLLTMGVTGVRRMWTISDKVQDLQKLKPKEAAAAXXXXXXXXTPAVAPPDVDVVELVALHSRNDLGKWE-PDVMVAPTAAT--LREHMEGMS--LIENAVAGSSSEDYQAIGQAAKMQAMLDAFLILLNVAAFVGYGTIPLDVFFPQRS----LLTDWFPPGPTAWWGNFVGDVAWTIEPVTVLLAPYVLLRQAQPKRK 1291
E +V+L+RN CV+K L + +PL + PFP T LE IG LQ+ FNL G ++ V R + W ++ K K ++ L AA + R + GIC+L IG G + L+ S++ V + +V +E AL VLL + + S K P + +A AV P D+ W P TAA L+ E ++ L ++ ++ + QA G + ++A D L++LN+ AF+GY P+ FFP ++T W ++GN +GD AWT+EP +L P L+ AQ R+
Sbjct: 9 ETVVALLRNGLCVIKDL-DLGGIASKPLESTQNPFPGI-------------TPLEICIGALQVAAIFFNLIGGFNDISIVGVHRPVLRAWAR------VTAGRKEKQPSLMAQQLNAAQAATNTRFVVGICKLFIGVGFIPLAMCSFQNVFLWYVNWGLVGMEAALLVLLGYMCGDIAKTGKKSRDALSFAKKMP-DVTSAPLEVVALLADAVNEPVPDM-------------PWPAPPAGYLETAANQELKRFKESVASKLKDSKDEAKANLEAQAYGDS--LRAWFDVLLLVLNLLAFIGYFIFPVTFFFPDEKWVAEMVTYWPGHEYCEYYGNLLGDAAWTVEPALLLFVPR-LIDGAQASRR 337
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Match: A0A7S2NA49_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2NA49_9EUKA) HSP 1 Score: 58.5 bits (140), Expect = 1.360e-5 Identity = 65/253 (25.69%), Postives = 104/253 (41.11%), Query Frame = 2
Query: 527 GKAKGADALSAVLGRQDAANHRRIIAGICQLIIGTGLLCLSCFSWKLVGIMTTATAVVILEVALAVLLTMGVTGVRRMWTISDKVQDLQKLKPKEAAAAXXXXXXXXTPAVAPPDVDVVELVALHSRNDLGKWEPDVMVAPTA-ATLREHMEGM--------SLIENAVAGSSSEDYQAIGQAAKMQAMLDAFLILLNVAAFVGYGTIPLDVFFPQRSLLTDWFPP---GPTA-WWGNFVGDVAWTIEPVTVL 1246
G A A L + AA + +C+L+IG + L+ S + + +++LE+ALA +LT+ GV + + D +L + A TPA + V+ S +P P A + +H +G+ S++ N + +ED + +A +A + LN AF GYG P+ F P + W P TA +WGN GD AWT+E + VL
Sbjct: 75 GVAPPAVVAQHALASESAAARQTGRIMVCKLMIGGAFVVLTLSSLHVSYPVVINWFLLLLELALAYILTVMAAGVANL---VQRAADTHRLA-EALAKGPLSSETLATPAA----LSVLAQACGESLPPSPWLQPPSAADPMGIAAVTKHTKGIEKVVGRVQSVMLNGKRETLAEDLSNESRKLTAKAAHNAVQLFLNAVAFAGYGMFPVTFFGPSEETMRGWVPMWGGSETAQFWGNLAGDAAWTVEAILVL 319 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14739.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig80.14739.1 >prot_P-fluviatile_contig80.14739.1 ID=prot_P-fluviatile_contig80.14739.1|Name=mRNA_P-fluviatile_contig80.14739.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=361bp MMTELLVSLVRNAACVLKSLLPADCVVMQPLMTFPFPAFSLVGGASEQLEback to top mRNA from alignment at P-fluviatile_contig80:251311..261184+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig80.14739.1 ID=mRNA_P-fluviatile_contig80.14739.1|Name=mRNA_P-fluviatile_contig80.14739.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9874bp|location=Sequence derived from alignment at P-fluviatile_contig80:251311..261184+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig80:251311..261184+ >mRNA_P-fluviatile_contig80.14739.1 ID=mRNA_P-fluviatile_contig80.14739.1|Name=mRNA_P-fluviatile_contig80.14739.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2166bp|location=Sequence derived from alignment at P-fluviatile_contig80:251311..261184+ (Porterinema fluviatile SAG_2381)back to top |