mRNA_P-fluviatile_contig80.14733.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: D7FQ66_ECTSI (Putative oxidoreductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ66_ECTSI) HSP 1 Score: 468 bits (1203), Expect = 5.300e-156 Identity = 243/323 (75.23%), Postives = 278/323 (86.07%), Query Frame = 1
Query: 94 VASTTAPSRLIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVRGDPVSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGV--AARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRHSVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYIAPGAYYDKAIRKHASAAGRDAELQAALWEVSLNILVSGGDLQRAVDI 1056
VAST S+LIIVTGANSGIG+ECCR LA+ G RV+M CRNVTAG E A++IL+ +PDACVECH LDLASF+SVRSFAKSAV G VSAV+HNAGVMA PY TT+DGHELTFQVNHLA F+LTELLLPNLR+A+R+TG+ SRVV+VASGAHRWA+ N QGAAGGLA GAGAAQH +GAGG+ A RGWG KW+AYAGSKLCNVLYAAELT+RYGGE+SGVV VAVRPGTVRT I RHS +LRF+F L PFLT VEKAG++V+NAA+DPY+A GAYYDK +R ASAAG+D ELQAALW V++NILVSGGDLQRAVD+
Sbjct: 22 VASTA--SKLIIVTGANSGIGKECCRHLAALGGYRVMMACRNVTAGHEAANDILRQHPDACVECHPLDLASFSSVRSFAKSAVGGRAVSAVIHNAGVMAVPYRTTVDGHELTFQVNHLAQFFLTELLLPNLRRAYRDTGELSRVVIVASGAHRWASTNNQGAAGGLARGAGAAQHEVGAGGISYATEMSRGWG--KWQAYAGSKLCNVLYAAELTRRYGGEDSGVVGVAVRPGTVRTAIARHSPLLRFIFTLVQPFLTSVEKAGEVVSNAAVDPYVAAGAYYDKDVRTPASAAGQDMELQAALWAVTMNILVSGGDLQRAVDL 340
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A835YS02_9STRA (Putative oxidoreductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS02_9STRA) HSP 1 Score: 236 bits (601), Expect = 6.590e-67 Identity = 140/316 (44.30%), Postives = 182/316 (57.59%), Query Frame = 1
Query: 121 LIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHA-----------------LDLASFASVRSFAKSAVRGDPVSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRHSVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYIAPGAYYDKAIRKHASAAGRDAELQAALWEVSLNI 1017
+ IVTGANSG+GREC + LA+ + V++ CR+V AG V EIL+ +P A +EC LDLA FASVR+FA+ A+ PVS++VHNAGVM P T DGH+LT QVNHLAPF LT LLLPN++ A +E G SRVV+V+SG HRW + H+ W+ YA +KL N+L+ +EL +R G G+ AVAVRPG RT I RHS +LR L+AL P LTPV++AGQ +A A + P + G Y++K + S RD Q ALWE SL +
Sbjct: 35 ICIVTGANSGLGRECVKTLAATK-THVILACRDVKAGAAVVEEILEVHPGASLECQITQHVNTNCCAPGRSPQKLDLADFASVRTFAEQAIGDRPVSSIVHNAGVMGAPRQLTKDGHDLTIQVNHLAPFLLTNLLLPNMKAAAKELGRSSRVVVVSSGTHRWGSFE--------------PDHLY----------NDKTCGPWQMYANTKLYNILFVSELHRRQG--TLGITAVAVRPGLCRTAITRHSKLLRVLYALLSPILTPVDQAGQSLAAAVLGPNVEGGTYWNKLLEVTPSPDARDTAAQRALWEASLRL 323
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A166JAP2_DAUCS (Uncharacterized protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166JAP2_DAUCS) HSP 1 Score: 158 bits (400), Expect = 2.170e-39 Identity = 111/309 (35.92%), Postives = 154/309 (49.84%), Query Frame = 1
Query: 127 IVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVR-GDPVSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWK-----------AYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRHSVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYI--APGAYYDKAIRKHASAAGRDAELQAALWEVSL 1011
IVTGA +GIG E R LA G V+MG RNV AG++V EILQ +P + ++ +DL S AS+R FA + G P++ +++NAG+MAPP++ + D E F VNHL PF LT LLL ++K E G R+V VAS HR+ G R K AY SKLCN+L+ ELT+R E + V A ++ PG + T I ++S +L +F A FL V + A+ P + G Y+ + + AS+ RD EL LW+ SL
Sbjct: 33 IVTGATNGIGLETTRVLA-LRGVHVIMGVRNVKAGEKVKGEILQKHPGSKIDVMEIDLNSQASIRKFAADFIATGLPLNILINNAGIMAPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTMKKTANECGKEGRIVNVASELHRYGYKE--------------------------------GIRFDKINDKASYNPNSAYGQSKLCNILHCVELTRRLKEEGANVTANSLHPGVIATNIAQNSSLLGCIFGCAQIFLKNVPQGAATTCFLALSPKVNGVSGEYFMDSNKAKASSMARDPELAKKLWDFSL 308
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: UPI0007EF8C7F (short-chain dehydrogenase TIC 32, chloroplastic-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF8C7F) HSP 1 Score: 157 bits (397), Expect = 5.520e-39 Identity = 108/298 (36.24%), Postives = 159/298 (53.36%), Query Frame = 1
Query: 127 IVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVR-GDPVSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRHSVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYI--APGAYYDKAIRKHASAAGRDAELQAALWEVSL 1011
IVTGA +GIG+E R LA G V++G RNV AG++V E+LQ +P + ++ +DL+S AS+R FA + G P++ +++NAG+M+PP++ + D E F VNHL PF LT LLL ++K R+ G RVV VAS HR+ +G + + VI AY SKLCN+L+ ELT+R E + V A ++ PG + T I ++S +L + A F+ V + A+ P + G Y+ + + AS+ RD EL LWE SL
Sbjct: 33 IVTGATNGIGKETTRVLA-LRGVHVILGVRNVKAGEKVKEEMLQKHPGSEIDVMEIDLSSQASIRKFAAEFIATGLPLNILINNAGMMSPPFTLSKDNIEQQFAVNHLGPFLLTNLLLDTMKKTARDCGKEGRVVNVASELHRYGYK--EGIIFDKINDKTSYKPVI-------------------AYGQSKLCNILHCVELTRRLKEEGANVTANSLHPGVIATNISQNSSLLACVLGCANIFMKNVPQGAATTCYVALSPKVNGLSGEYFMDSNKAKASSMARDPELAKKLWEFSL 308
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: UPI001C70BBF5 (WW domain-containing oxidoreductase-like n=4 Tax=Penaeus TaxID=133894 RepID=UPI001C70BBF5) HSP 1 Score: 156 bits (394), Expect = 1.320e-37 Identity = 117/307 (38.11%), Postives = 166/307 (54.07%), Query Frame = 1
Query: 118 RLIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHAL--DLASFASVRSFAKS-AVRGDPVSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGT-VRTGIVRHSVMLRFLFALAYPFLTPVEKA--GQIVANAAIDPYIAPGAYYDKAIRKHASAAGRDAELQAALWEVSLNIL 1020
R+ +VTGANSGIG E R LA + GC V+ CR+VT +E +IL P+A C+AL DLAS SVR+FA++ AV+ D ++ NAGV P++ T DG E TFQ+NHL+ FYL LL P L ++ P+RVV V++ AHR+AT++G L+ A + I AY+ SKLCNVL A E+ +R+G + G+ AV PG V T I RH + R ++A+ PF +++A I A+ D G Y + + S+ + + LW SLNI+
Sbjct: 119 RVAVVTGANSGIGYETARTLA-YHGCTVVFACRSVTKAEEAISKILAQRPNA--SCYALHIDLASLESVRTFAQTFAVKFDRCDILILNAGVFGLPHTLTADGLETTFQINHLSQFYLAVLLQPMLSRSA-----PARVVFVSAEAHRFATLDGACIEDELSPPHKATYNSI------------------TAYSNSKLCNVLTALEMQRRFGNQ--GLNCYAVHPGNAVSTYITRHWWVYRLIYAMVRPFTKSLQQACATSIYCAASTDISKYGGVYVNNCVPCLPSSTSLSSVISNRLWNTSLNII 397
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A6G1QN20_9TELE (Retinol dehydrogenase 12 n=1 Tax=Channa argus TaxID=215402 RepID=A0A6G1QN20_9TELE) HSP 1 Score: 151 bits (381), Expect = 8.440e-37 Identity = 103/303 (33.99%), Postives = 160/303 (52.81%), Query Frame = 1
Query: 124 IIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVRGDP-VSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRH-SVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYIA--PGAYYDKAIRKHASAAGRDAELQAALWEVSLNIL 1020
+I+TGAN+GIG+E LA G +V++ CR++ Q E+++ + + V C LDLA S+R FA++ + +P ++ +++NAGVM PY T DG E+ VNHL F LT LL+ ++K+ P+R+V V+S AH + ++N + Q K KAYA SKL NVL+ L KR G +GV ++ PG ++T + RH + +FL+ +A PF+ + Q A++P +A G YY + SAAG+D E+ LWE+S +L
Sbjct: 42 VIITGANTGIGKETALDLAK-RGAKVILACRDIEKAQVATKEVIESSGNENVVCMKLDLADSKSIREFAEAINKDEPKLNILINNAGVMVCPYGKTADGFEMQIGVNHLGHFLLTYLLIDLIKKS-----TPARIVNVSSMAHSFGSIN--------LDDLNSEQSYD----------------KNKAYAQSKLANVLFTRSLAKRLEG--TGVTTYSLHPGVIKTDLWRHLNGPQQFLWKMASPFIKNSAQGAQTTIYCAVEPSLANESGGYYSDCAPANCSAAGKDDEMAQKLWELSCRML 312
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A7E5WQN5_TRINI (retinol dehydrogenase 13-like n=2 Tax=Trichoplusia ni TaxID=7111 RepID=A0A7E5WQN5_TRINI) HSP 1 Score: 151 bits (382), Expect = 9.100e-37 Identity = 114/311 (36.66%), Postives = 158/311 (50.80%), Query Frame = 1
Query: 109 APSRLIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVRGDP-VSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWK---AYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRHSVMLR-----FLFALAYPFLTPVEKAGQIVANAAIDPYIAP--GAYYDKAIRKHASAAGRDAELQAALWEVS 1008
A +++IVTGANSGIGRE LA G +V + CRN+ +EV EI+ + + V C DLAS S+R F + +P + +++NAGVM PP S T DG E VNHL F LT LLL L+K+ PSRV+ VA +H +N + + ++K+ A+A SKL VL+ EL KR G SGV A+AV P T I RH M++ F++ L +PF+ + GQ + AA+DP +A G YY +K SA +D EL +W+VS
Sbjct: 39 ADGKVVIVTGANSGIGREAAWDLAR-RGAKVFLACRNMEKCEEVRREIVLESNNKYVYCRPCDLASTKSIRKFVERFKSEEPRLDVLINNAGVMEPPASVTRDGFETQLGVNHLGHFLLTNLLLDTLQKSA-----PSRVISVAGSSHYRGDIN---------------KEDLNF------------SKKYDGPAAHAQSKLATVLFIRELGKRMLG--SGVAAIAVDPSLTDTAITRHMSMMKSVSRYFVYPLFWPFMKTAKLGGQTLVQAALDPALADCSGDYYVDMKKKDPSALAQDYELSDWMWKVS 314
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A6A4SBG2_SCOMX (Uncharacterized protein n=3 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4SBG2_SCOMX) HSP 1 Score: 151 bits (382), Expect = 9.100e-37 Identity = 101/305 (33.11%), Postives = 158/305 (51.80%), Query Frame = 1
Query: 118 RLIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVRGDP-VSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRH-SVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYIAP--GAYYDKAIRKHASAAGRDAELQAALWEVSLNIL 1020
R ++TGAN+GIGRE LA G +V++ CR++ + E+++ + ++ V C LDLA S+R FA++ +G+ ++ +++NAGVM PY T DG E+ VNHL F LT LLL ++++ P+R+V V+S AH W T+N + + G K KAYA SKL NVL+ L K+ G +GV ++ PG V+T + RH S ++F+ + PF + Q A++P + G YY +AAG+D +L LW++S +L
Sbjct: 56 RTAVITGANTGIGRETALDLAR-RGAKVIIACRDMEKAEAAVKEVIESSGNSNVHCMKLDLADTKSIREFAEAINKGESKLNILINNAGVMVCPYGKTADGFEMQIGVNHLGHFLLTHLLLDLVKRSA-----PARIVTVSSMAHSWGTIN--------------LEDINSEKGY----------NKGKAYAQSKLANVLFTHSLAKKLEG--TGVTTYSLHPGVVQTDLWRHLSGPVQFVMKMVSPFTKDSVQGAQTTIYCAVEPSLEKESGGYYSDCAPASCAAAGKDDDLAQKLWDLSCQLL 328
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A3Q1CYP5_AMPOC (Retinol dehydrogenase 12-like n=5 Tax=Pomacentridae TaxID=30863 RepID=A0A3Q1CYP5_AMPOC) HSP 1 Score: 150 bits (378), Expect = 1.230e-36 Identity = 102/306 (33.33%), Postives = 166/306 (54.25%), Query Frame = 1
Query: 118 RLIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVRGDP-VSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRH-SVMLRFLFALAYPFL-TPVEKAGQIVANAAIDPYIA--PGAYYDKAIRKHASAAGRDAELQAALWEVSLNIL 1020
+ +++TGAN+GIG+E + LA G ++++ CR++ QE EI++ + + V+C LDL+ S+R FA++ R +P ++ +++NAGVM PY T DG E VNH F LT LLL ++++ P+R++ V+S AH W ++N + + K KAY+ SKL NVL++ L KR G +GV ++ PG V+T + RH + L+F+ ++ PF+ TPV+ A Q A++P + G YY R S+AG+D ++ LWE+S +L
Sbjct: 18 KTVLITGANTGIGKETAKDLAK-RGAKIIIACRDMEKAQEALTEIIETSGNDNVKCMKLDLSDTKSIREFAEAFNRDEPKLNILINNAGVMVCPYGKTADGFETQIGVNHFGHFLLTHLLLDLIKRSA-----PARIITVSSMAHSWGSIN--------------LEDINSEKSY----------DKSKAYSQSKLANVLFSHSLAKRLEG--TGVTTYSLHPGVVKTDLGRHLNGPLQFIMKISTPFIKTPVQGA-QTSIYCAVEPSLENETGQYYSDCTRTSCSSAGKDDDVAQKLWELSCRML 290
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Match: A0A8D3CSR6_SCOMX (Retinol dehydrogenase 12, like n=9 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A8D3CSR6_SCOMX) HSP 1 Score: 151 bits (382), Expect = 1.660e-36 Identity = 101/305 (33.11%), Postives = 158/305 (51.80%), Query Frame = 1
Query: 118 RLIIVTGANSGIGRECCRQLASFEGCRVLMGCRNVTAGQEVAHEILQGNPDACVECHALDLASFASVRSFAKSAVRGDP-VSAVVHNAGVMAPPYSTTIDGHELTFQVNHLAPFYLTELLLPNLRKAHRETGDPSRVVLVASGAHRWATVNGQGAAGGLATGAGAAQHVIGAGGVAARGGRGWGTRKWKAYAGSKLCNVLYAAELTKRYGGEESGVVAVAVRPGTVRTGIVRH-SVMLRFLFALAYPFLTPVEKAGQIVANAAIDPYIAP--GAYYDKAIRKHASAAGRDAELQAALWEVSLNIL 1020
R ++TGAN+GIGRE LA G +V++ CR++ + E+++ + ++ V C LDLA S+R FA++ +G+ ++ +++NAGVM PY T DG E+ VNHL F LT LLL ++++ P+R+V V+S AH W T+N + + G K KAYA SKL NVL+ L K+ G +GV ++ PG V+T + RH S ++F+ + PF + Q A++P + G YY +AAG+D +L LW++S +L
Sbjct: 82 RTAVITGANTGIGRETALDLAR-RGAKVIIACRDMEKAEAAVKEVIESSGNSNVHCMKLDLADTKSIREFAEAINKGESKLNILINNAGVMVCPYGKTADGFEMQIGVNHLGHFLLTHLLLDLVKRSA-----PARIVTVSSMAHSWGTIN--------------LEDINSEKGY----------NKGKAYAQSKLANVLFTHSLAKKLEG--TGVTTYSLHPGVVQTDLWRHLSGPVQFVMKMVSPFTKDSVQGAQTTIYCAVEPSLEKESGGYYSDCAPASCAAAGKDDDLAQKLWDLSCQLL 354 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig80.14733.1 >prot_P-fluviatile_contig80.14733.1 ID=prot_P-fluviatile_contig80.14733.1|Name=mRNA_P-fluviatile_contig80.14733.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=344bp MNMRLHLLSLQLLLVSHFYGVTVASTTAPSRLIIVTGANSGIGRECCRQLback to top mRNA from alignment at P-fluviatile_contig80:188126..198150- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig80.14733.1 ID=mRNA_P-fluviatile_contig80.14733.1|Name=mRNA_P-fluviatile_contig80.14733.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10025bp|location=Sequence derived from alignment at P-fluviatile_contig80:188126..198150- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig80:188126..198150- >mRNA_P-fluviatile_contig80.14733.1 ID=mRNA_P-fluviatile_contig80.14733.1|Name=mRNA_P-fluviatile_contig80.14733.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2064bp|location=Sequence derived from alignment at P-fluviatile_contig80:188126..198150- (Porterinema fluviatile SAG_2381)back to top |