mRNA_P-fluviatile_contig80.14730.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig80.14730.1
Unique NamemRNA_P-fluviatile_contig80.14730.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: D7FQ63_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ63_ECTSI)

HSP 1 Score: 445 bits (1145), Expect = 1.350e-150
Identity = 329/459 (71.68%), Postives = 352/459 (76.69%), Query Frame = 1 
Query:   22 EAAGRIQAVQRGRLARLSADRRRRSLVRRETTARWEREQAVIKIQAACRGTRGREXXXXXXXXXXXXXXXXXXXXXXXXXKNFSRTAPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDLSGNFISSAKXXXXXXXXXXXXXXXXCLTSVLDYELFEGEDFSWRASQEWLHDWRSEVVRSMSMLHRVNISYNSIDRLRDLSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQIFEEYLPGVDFTNPLPPFCEPE--PAPVAERPDSTGSVDGTSDIPGGSRVVCEDGVV 1392
            +AA RIQAVQRGRLAR SADRRRRSLVRRE TARWEREQAVIKIQAACRGTRGRE      XXXXXXXXXXXXXXXXXX K+F+R +PGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAAN G+S+IN+I +FPLLQTVDLSGN ISS K  XXXXXXXXXXXXXX                                                ID LRDLSHHRN     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHL +N I+K ENVGS KLA+LRILRLG+N I NLSNLK C +L  LDVRFNKVSAVRQVE+LQ CQFLHT+VLEGNP+DRLEAYRARVIFRLQGLMLLDRNKI PEEKVKAVNLMGDEESDLPHRKQ+F ++LPG +FTN LPPF EPE  PAP  +  +   +V G SD P     V ED  V
Sbjct:    7 QAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQAACRGTRGREETALYRXXXXXXXXXXXXXXXXXXRKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIAEFPLLQTVDLSGNCISSTKPLXXXXXXXXXXXXXXXXXX--------------------------------------------IDSLRDLSHHRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLDHNYIEKAENVGSGKLASLRILRLGFNDIGNLSNLKTCLSLVTLDVRFNKVSAVRQVEYLQECQFLHTLVLEGNPMDRLEAYRARVIFRLQGLMLLDRNKISPEEKVKAVNLMGDEESDLPHRKQVFHKHLPGAEFTNTLPPFREPEGPPAPEPDPAEKPETVSG-SDSPEEGGFVFEDSTV 420
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A6H5KB11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB11_9PHAE)

HSP 1 Score: 201 bits (512), Expect = 1.700e-58
Identity = 111/158 (70.25%), Postives = 119/158 (75.32%), Query Frame = 1 
Query:   22 EAAGRIQAVQRGRLARLSADRRRRSLVRRETTARWEREQAVIKIQ------AACRGTRGREXXXXXXXXXXXXXXXXXXXXXXXXXKNFSRTAPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDLSGNFISSAK 477
            +AA RIQAVQRGRLAR SADRRRRSLVRRE TARWEREQAVIKIQ      AACRGTRGRE                         K+F+R +PGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAAN G+S+IN+I +FPLLQTVDLSGN ISS K
Sbjct:    7 QAAARIQAVQRGRLARFSADRRRRSLVRREATARWEREQAVIKIQLCLAFQAACRGTRGREETALYREQQAAASKIQARIRGDKARKDFNRKSPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANAGVSNINSIVEFPLLQTVDLSGNCISSTK 164
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A835YJY7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJY7_9STRA)

HSP 1 Score: 190 bits (482), Expect = 6.320e-51
Identity = 164/377 (43.50%), Postives = 207/377 (54.91%), Query Frame = 1 
Query:  262 KNFSRTAPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDLSGNFISSAKXXXXXXXXXXXXXXXXCLTSVLDYELFEGED------------------FSWRASQEW--LHDWRSEVVRSMSMLHRVNISYNSIDRLRDLSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLHYNSIQKIENVGSDKLAN-------LRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQIFEEYLPG--VDFTNPLPPFCEPEPAPV 1305
            K  +  A GG  LDRA +K+GLHTLGR PH LR C  G     +G+  + A+ D+PLLQT+D+S N ++                    +T VLD+E+  G D                   +  A   W  L DWRS  VR+ S L   ++S N+I  +RDLS HRNL  L   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX GLPLVEL L            + +  N       LR L L  N I  LS L+ C +L  LD+  N +SA+RQVE+L+ C  L  + L        E YR RV+ RLQGL LLD   + P+EKV+A+NL G E SDL +R+ +F          + + LPP+ EPEPAP+
Sbjct:  128 KRVAALADGGTTLDRAAVKRGLHTLGRAPHSLRHCLTGCDLRGLGLRDVAALSDWPLLQTLDVSDNALTELAPLCALPFLCELHAARNGVTEVLDFEVLRGRDQTIALNAYPHVLCAANGTHARSADMPWEDLLDWRSSAVRAESALALADLSENAIAAMRDLSPHRNLHTLLLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLPLVELDLXXXXXXXXXXXAAPESGNGCAPPLLLRRLNLADNFIIELSGLQRCASLVTLDLSGNALSALRQVEWLRDCAVLRELSLARTAAAEQEWYRLRVLLRLQGLTLLDSEPVSPQEKVEALNLAGGEGSDLANRQALFRGTFQEHEAQWCDLLPPYQEPEPAPM 504
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A8J2T0T5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T0T5_9STRA)

HSP 1 Score: 114 bits (284), Expect = 3.090e-23
Identity = 126/477 (26.42%), Postives = 187/477 (39.20%), Query Frame = 1 
Query:   19 EEAAGRIQAVQRGRLARLSADRRRRSLVRRETTARWEREQAVIKIQAACRGTRGREXXXXXXXXXXXXXXXXXXXXXXXXXKNFSRTAPGGLPLDRADIKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDLSGNFISSAKXXXXXXXXXXXXXXXXCLTSVLDYEL---FEGEDFSWRASQEWLHDWRSEVVRSMSMLHRVNISYNSIDRLRDLSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVELHLHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDV---------------------------------------------RFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQIFEEYL-PGVDFTNPLPPFCEPEPAP 1302
            E+AA R+QA+ RG         R R  V R  T + EREQA   +Q   RG                              +  +R   G   L+R DI +GLHTLGR   DL+  Y+G   + + +  I+ +  +  LQ +D+S N ++S                   L S  D E+     GE  +W   ++           + S L  V++S N I+ L + S HR L+                                           +  L  N + +I   G   L+ L+IL +  N +  +S      AL  LDV                                             R N +  VR+VEFL+      +++L+GNP   L  YR RV+FRLQ L +LD   +  ++K+KAVNL G +ESDL HR++ F ++    ++F +PLPPF EPE +P
Sbjct:   10 EDAATRLQAISRGH--------RDRQAVERTQTLKKEREQAASLLQTRQRGRIACREVDERREQTQAATSIGRIYRGKVTRR--ARVDRGPRSLERDDIAQGLHTLGRTA-DLKHAYLGCSVSGLQLVDIDVLQSYEHLQALDVSCNNLTSLSPLEHLPYLTRLNASGNKL-SQFDLEIPRNVPGEK-AWTLGRK----------HAGSNLIEVDLSDNDIEVLGEQSTHRRLE-------------------------------------------KFVLDGNRMYEI--TGLQNLSRLKILSMRNNDLSYVSXXXXXSALVELDVGGNRLTTMGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARDNCIEKVREVEFLERLPLFSSLLLQGNPCSDLPFYRRRVVFRLQQLRVLDGIAVSSDDKIKAVNLHGGDESDLKHRRETFRKHFGSALEFEDPLPPFVEPEKSP 418
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A3F2RVW1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RVW1_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 2.120e-17
Identity = 90/344 (26.16%), Postives = 150/344 (43.60%), Query Frame = 1 
Query:  313 IKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDLSGNFISSAKXXXXXXXXXXXXXXXXCLTSVLDYELFE-GEDFSWRASQEWLHDWRSEVV----RSMSM-----------LHRVNISYNSIDRLRDLSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVE-LHLHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEA----YRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQIFEEYLPGVDFTNPLPPF 1281
            + K L  LGRNP      Y      ++ +S I  I +FP +Q +  + N + +                   LT VLD+++ +   D +W     W+     +      R +SM           L  +++++N+I+ +  +S  R L+ LD                                   GL  +E L L +N +  I++ G   L  L  L + +N ++ LS+L  C  L  L++ +N+V+ + ++  L   ++L  + L G P+  ++     YRARVI RL  L  LD   +  +EKVKA+ + G   SDL  R+Q+  +YLPG +F N LPP 
Sbjct:    2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWIGSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGLVANEDSSH---------------GLQALETLLLSHNQLTAIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDETVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFANFLPPL 326
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A3R7K2Y1_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K2Y1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.450e-15
Identity = 87/339 (25.66%), Postives = 147/339 (43.36%), Query Frame = 1 
Query:  313 IKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDLSGNFISSAKXXXXXXXXXXXXXXXXCLTSVLDYELFE-GEDFSWRASQEWLHDWRSEVV----RSMSM-----------LHRVNISYNSIDRLRDLSHHRNLQDLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLPLVE-LHLHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEA----YRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQIFEEYLPGVDFTN 1266
            + K L  LGRNP      Y      ++ +S I  I +FP +Q +  + N + +                   LT VLD+++ +   D +W     W+     +      R +SM           L  +++++N+I+ +  +S  R L+ LD                                   GL  +E L L +N +  I++ G   L  L  L + +N ++ LS+L  C  L  L++ +N+V+ + ++  L   ++L  + L G P+  ++     YRARVI RL  L  LD   +  +EKVKA+ + G   SDL  R+Q+  +YLPG +F N
Sbjct:    2 VSKRLGVLGRNPFTQAHIYTTATLTDLRLSDIEVIREFPHIQHLVCNQNELKTLDPLKHIPLLLTLDAEENQLTEVLDFQVPKCTPDNAWVDGARWIGSLLRKATLNRNRIVSMPTHELSTTHPFLQELHLAFNTIEEISGVSQLRFLRVLDLSHNRLSSIRGLVANEDSSR---------------GLQALETLLLSHNQLTVIDD-GVAFLPRLTHLDVAHNQLKTLSSLGECVQLQRLELAYNRVADINELNCLANLRYLGQLSLGGCPLVEIQVSLIFYRARVIRRLLQLQKLDDEIVTSKEKVKALVMHG---SDLDARRQVAAKYLPGQEFAN 321
[Close]
BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A7S2BD69_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD69_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-15
Identity = 58/167 (34.73%), Postives = 82/167 (49.10%), Query Frame = 1 
Query:  826 GLPLVELHLHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRL---------EAYRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQIFEEYLPGVDFTNPLPPFCEPEPA 1299
            GLPL EL L  N I+ IEN+  +K+  L                                 AVR+VE++Q    L ++VL GNPV  +           YR RV+ RLQGL  LD      EEK KA+NL G + SD+ +R ++F++  P ++++N LP F E EP+
Sbjct:   10 GLPLTELALDNNKIKFIENL--EKVPCLAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVREVEYVQNLPLLCSLVLTGNPVAPVVIPEDPSLPNFYRLRVLVRLQGLTSLDGKLATAEEKTKAMNLHGGDNSDVLNRARVFKKVFPDMEYSNTLPCFVETEPS 174
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BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A5A9PIH9_9TELE (Leucine-rich repeat and guanylate kinase domain-containing protein n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9PIH9_9TELE)

HSP 1 Score: 75.9 bits (185), Expect = 6.540e-11
Identity = 55/171 (32.16%), Postives = 81/171 (47.37%), Query Frame = 1 
Query:  829 LPLVELHLHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDEESDLPHRKQ----IFEEYLPGVDFTNPLPPFCEPEPAPVAERPDSTG 1329
            LPL EL L  N+IQKIEN+ +  L  L++L L  N I++LS L     +  ++++ N +S + +   L             NPV   + YR  VIF LQ L LLD+  +  EEKV +VN        +  R      +++   P + F + LP    P P  V   P + G
Sbjct:  168 LPLRELCLSGNAIQKIENLQA--LRKLQVLDLSCNRIQSLSGLHTLYLMGTVNLQSNLISEINEASHLXXXXXXXXXXXXKNPVQEKDDYRLAVIFLLQHLTLLDQQTVTAEEKVSSVNKYDPPLEVIAARDHMTNLLYQLMQPQIIFDSTLPSLDTPYPMLVLTGPQACG 336
[Close]
BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A4V1IT65_9FUNG (Outer arm dynein light chain 1 (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4V1IT65_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 3.630e-9
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:  850 LHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKA 1179
            L  N I +IENVG  KL  LR L+L  N I ++ NL+  +AL  LD+  N V     +E L+    L  + L GNPV++L+ YRA  I  L  L +LD  +I   E+++A
Sbjct:   52 LQNNQIGRIENVG--KLKGLRYLQLALNNIRHIENLQHNEALEKLDLTVNFVENPLDLENLKDNYRLRELYLVGNPVNKLDGYRAFAIHTLPQLRVLDGVEITRTERLEA 159
[Close]
BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Match: A0A4P9XDS3_9FUNG (Uncharacterized protein (Fragment) n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XDS3_9FUNG)

HSP 1 Score: 67.8 bits (164), Expect = 1.020e-8
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 1 
Query:  850 LHYNSIQKIENVGSDKLANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFLHTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKA 1179
            L  N I +IENVG  KL  LR L+L  N I ++ NL+  +AL  LD+  N V     +E L+    L  + L GNPV++L+ YRA  I  L  L +LD  +I   E+++A
Sbjct:   48 LQNNQIGRIENVG--KLKGLRYLQLALNNIRHIENLQHNEALEKLDLTVNFVENPLDLENLKDNYRLRELYLVGNPVNKLDGYRAFAIHTLPQLRVLDGVEITRTERLEA 155
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D7FQ63_ECTSI1.350e-15071.68Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KB11_9PHAE1.700e-5870.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YJY7_9STRA6.320e-5143.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A8J2T0T5_9STRA3.090e-2326.42Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A3F2RVW1_9STRA2.120e-1726.16Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3R7K2Y1_9STRA1.450e-1525.66Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A7S2BD69_9STRA1.790e-1534.73Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A5A9PIH9_9TELE6.540e-1132.16Leucine-rich repeat and guanylate kinase domain-co... [more]
A0A4V1IT65_9FUNG3.630e-940.00Outer arm dynein light chain 1 (Fragment) n=1 Tax=... [more]
A0A4P9XDS3_9FUNG1.020e-840.00Uncharacterized protein (Fragment) n=1 Tax=Cauloch... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig80contigP-fluviatile_contig80:159385..164059 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score450.3
Seed ortholog evalue1.1e-123
Seed eggNOG ortholog2880.D7FQ63
EggNOG free text desc.axoneme assembly
EggNOG OGsCOG4886@1,KOG0531@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons8
Model size1392
Cds size1392
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig80.14730.1prot_P-fluviatile_contig80.14730.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig80 159385..164059 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817270.422778-CDS-P-fluviatile_contig80:159384..1595401622817270.422778-CDS-P-fluviatile_contig80:159384..159540Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 159385..159540 +
1693571853.0920537-CDS-P-fluviatile_contig80:159384..1595401693571853.0920537-CDS-P-fluviatile_contig80:159384..159540Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 159385..159540 +
1622817270.4337153-CDS-P-fluviatile_contig80:160413..1607931622817270.4337153-CDS-P-fluviatile_contig80:160413..160793Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 160414..160793 +
1693571853.5721414-CDS-P-fluviatile_contig80:160413..1607931693571853.5721414-CDS-P-fluviatile_contig80:160413..160793Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 160414..160793 +
1622817270.4445522-CDS-P-fluviatile_contig80:161091..1612231622817270.4445522-CDS-P-fluviatile_contig80:161091..161223Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 161092..161223 +
1693571853.5858002-CDS-P-fluviatile_contig80:161091..1612231693571853.5858002-CDS-P-fluviatile_contig80:161091..161223Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 161092..161223 +
1622817270.4577303-CDS-P-fluviatile_contig80:161688..1618461622817270.4577303-CDS-P-fluviatile_contig80:161688..161846Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 161689..161846 +
1693571853.6055703-CDS-P-fluviatile_contig80:161688..1618461693571853.6055703-CDS-P-fluviatile_contig80:161688..161846Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 161689..161846 +
1622817270.4691458-CDS-P-fluviatile_contig80:162276..1624511622817270.4691458-CDS-P-fluviatile_contig80:162276..162451Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 162277..162451 +
1693571853.6168008-CDS-P-fluviatile_contig80:162276..1624511693571853.6168008-CDS-P-fluviatile_contig80:162276..162451Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 162277..162451 +
1622817270.4797544-CDS-P-fluviatile_contig80:162897..1630481622817270.4797544-CDS-P-fluviatile_contig80:162897..163048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 162898..163048 +
1693571853.6262252-CDS-P-fluviatile_contig80:162897..1630481693571853.6262252-CDS-P-fluviatile_contig80:162897..163048Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 162898..163048 +
1622817270.4904137-CDS-P-fluviatile_contig80:163517..1635921622817270.4904137-CDS-P-fluviatile_contig80:163517..163592Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 163518..163592 +
1693571853.6357737-CDS-P-fluviatile_contig80:163517..1635921693571853.6357737-CDS-P-fluviatile_contig80:163517..163592Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 163518..163592 +
1622817270.5030963-CDS-P-fluviatile_contig80:163894..1640591622817270.5030963-CDS-P-fluviatile_contig80:163894..164059Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 163895..164059 +
1693571853.6472814-CDS-P-fluviatile_contig80:163894..1640591693571853.6472814-CDS-P-fluviatile_contig80:163894..164059Porterinema fluviatile SAG_2381CDSP-fluviatile_contig80 163895..164059 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig80.14730.1

>prot_P-fluviatile_contig80.14730.1 ID=prot_P-fluviatile_contig80.14730.1|Name=mRNA_P-fluviatile_contig80.14730.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=464bp
MHGFTAEEAAGRIQAVQRGRLARLSADRRRRSLVRRETTARWEREQAVIK
IQAACRGTRGREETARYRQQQAAASKIQARIRGDRARKNFSRTAPGGLPL
DRADIKKGLHTLGRNPHDLRLCYIGLMAANVGISSINAIGDFPLLQTVDL
SGNFISSAKPLAKLPFLQDLDISHNCLTSVLDYELFEGEDFSWRASQEWL
HDWRSEVVRSMSMLHRVNISYNSIDRLRDLSHHRNLQDLDLSHNAVEVLE
GLSSLKYLRILKINNNRIRRIEGLDGLPLVELHLHYNSIQKIENVGSDKL
ANLRILRLGYNAIENLSNLKGCQALTVLDVRFNKVSAVRQVEFLQGCQFL
HTVVLEGNPVDRLEAYRARVIFRLQGLMLLDRNKIPPEEKVKAVNLMGDE
ESDLPHRKQIFEEYLPGVDFTNPLPPFCEPEPAPVAERPDSTGSVDGTSD
IPGGSRVVCEDGVV
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mRNA from alignment at P-fluviatile_contig80:159385..164059+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig80.14730.1 ID=mRNA_P-fluviatile_contig80.14730.1|Name=mRNA_P-fluviatile_contig80.14730.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4675bp|location=Sequence derived from alignment at P-fluviatile_contig80:159385..164059+ (Porterinema fluviatile SAG_2381)
ATGCATGGGTTTACAGCGGAAGAGGCGGCAGGGCGCATACAAGCCGTGCA
GCGAGGACGCCTTGCTCGGTTGTCTGCTGATCGTCGAAGGCGAAGCCTAG
TTCGCAGGGAAACAACAGCGCGATGGGAAAGGGAGCAAGCGGTCATCAAG
ATACAGGTTCACGTCCTGGGCGCATCTTTGGCAGGAATTGGACGTGGCAT
AGATTCAGCACACACAGCACCAGTGGTGCCCGCTTGCTCGTGTCGTCTTG
GTAAATGAATGTATTGTTGCGCGAGTCTAGCGGACCACATCGTGTGTTTA
TCGACGACTGTAGTTGAAGTTGCTCGGACCGACTAAGAGGCGGGAAGGCC
GGTTGTGCGCACCATAGTCTAATCTGTGCAAATTTATTGCTTTCGTCGCT
GCGGCAAATTGACCCACAAACAATCGAGAAGGGGTGTATGCCTGTACTTT
GAACCTAACGTGGTAAAGTTGAGGGAAGAGACTGCAAAACTGGAGACATG
GAAGGGAGAGAAGAAAAAAATCAACCGGAATCAGCGGGGACGCTCTTCAG
CAATCTCCTCTAGATCGGACTTTGCATGTGGATGTAGACCGATGGTGTTG
TGTTGAAACGGAAAACGAAAAAAACTGAAAAGTTGAGCGCTCTTTCTTGG
AGGGGGTGAGTGTATCGAACAAAAAAAATGTGTAAAGTCTACTACACTAC
CTTGCAAGGGTCGGGCGTCCCAATCGTCTGTCGAGGAGGGAACCCTCTTT
CCCGATGACCAAAAAAGTCCTGTTATTTCACCTTTTTATGTATTCCGGCG
GGACGCCCACCTCCTACCGAATGACCAAGACTGGCATGTTTACGTCGACG
AAATGGGACGCAAACAAAAGATAGCAACACCACAGCCAACGATACACCAG
AAACGAATGATGCCAACACCTCGCGCAGGCTCTACCCCGAGTTCTCCAAA
TGTACAGACAGGTATATGTTCCCTGACCACTCGCCGCTGCGACAAACCAA
CTTGCCATCCCACCATGTGGCATGGAAAGGCCGCATGTCGGGGTACAAGA
GGTCGAGAAGAGACGGCGCGTTACCGACAGCAACAGGCTGCAGCATCAAA
GATCCAGGCCAGAATACGTGGCGACAGGGCGCGCAAGAACTTTAGCCGAA
CGGCACCCGGGGGCCTCCCGCTCGATCGAGCGGATATAAAAAAAGGCCTT
CATACCCTCGGCCGGAACCCGCACGACTTGCGCCTCTGTTACATCGGCTT
GATGGCTGCAAACGTAGGGATTTCGAGCATCAATGCGATTGGGGACTTTC
CTCTTCTCCAGACCGTAGATCTGAGCGGCAACTTCATATCAAGCGCGAAG
CCCCTGGCGAAGCTGCCATTCCTCCAAGACCTCGACATCTCCCACAACTG
TCTTACCAGGTACTGGAACGCGCGGGAGACGAAACTCGTGCGAAATACAT
GTGTTGTGGTATATATTGAACTTGAACACGAGTCACGGTAATATTGCGAA
AATGACAGATGTGTTGGCTGGAACGATATGCTTGCGCACACCTTTGGCGT
GGTTCATGCACGCGTCGACATCGCGTGTTGCCATATTCGCTCTATTTTCT
CATCTTGGTGACTGAATCCACTGTCAAGCCCAAGGGCTCTTGTATCTTGG
ATAGCTGTTCAACGCTTACCTTCCCTGCCATTCGGTTGTTCGTTTCCATT
CAAAAAGCGTCCTTGATTACGAGCTCTTCGAAGGGGAGGATTTTTCGTGG
CGGGCGAGCCAAGAGTGGTTGCACGACTGGCGGTCTGAGGTCGTGCGATC
GATGTCGATGCTCCATCGGGTGAACATTTCATACAACAGGTGGGACTTTT
CGAAAACAAAAGCAACTCCGTGTCCAATCCCCTTCGACGGGCTGTCTCTT
ATACAAGTGAAAGGCGTGCCAACGTTGATTCATGTGTCGGCAGCTTTCAT
CGAACCCAGGCGTGATTCTCACTAACCTCCGCCTTCGGACGTACAAAATA
AGCCGTGACTGGTCTTTTGCATGCTGCTCAACTCACGGATGGCGAGTGCT
GCCTTGTCGCGGCATGATATGCCTTTCTATTTCGAGGCGACTGTCAACTC
GCCCATTGACCCGTCGGGTCCGCTTTTGATGAGCGTGAAATGCAAAAGGA
TTTTAAATCCTGAAGTTATATTCTGTGGGAAGATGACCCATGTCACGCAC
CCCTGCCCCGGTAAAGTGCGGGTGAAATCAGCTGGAATCAAAGCTATCTC
ATACAGCAAAACTTTAGCTGCGTGTCACCACTAGTTGTGTGTTCGCAATT
GCAGCATCGACAGATTGAGGGACCTGTCGCACCACCGAAACCTCCAAGAT
CTCGATCTGAGCCACAACGCCGTCGAAGTCCTGGAGGGGCTGTCAAGTCT
CAAGTACCTACGGATCTTGAAGATTAACAACAACAGGATACGTCGAATCG
AGGGTCTGGATGGTGAGAGTGGATACGATCATTCGAATTGCAGGGTACGA
CTCGTACGGCGACGAGACACGAAGGTGCTGAGAGAACGAAGCATGTCAGG
GATCCAATGCACGAGGGTTTCAAAGATGCTCAACCTGAGGGATCCCCCAG
CGATGTTTGGCTAACTCGAAGGCGTCGAAATTTGGTGCAGAATTTGTGTT
CTTTCGGCCACTTCGATTCCGCTGAAGGGGTCTCCCGTGAGCCGCAGAAA
TCAGCAAATCCCGTCAAAAATGGGAAGATTCTGCTGCTTACCACCAGTGC
ACTAGATGCAGTCATTTCGAGGGGTTCCTGCATGAAGCAAACGTTATCCG
CAATTTTCCACCGACCAATTTGGCGAATGAACATGCGAGCTGCAAACACT
CAATCGTACCCTCCCTTTCCACTCTCCTAAAATCGCGCGAAGGTTTACCT
CTGGTGGAGCTTCACCTCCACTACAATTCCATTCAAAAGATAGAAAACGT
CGGGTCCGACAAGCTGGCCAACCTCCGCATCCTCCGTCTCGGCTACAACG
CCATCGAAAATCTTTCCAACCTCAAGGGCTGCCAGGCGCTCACCGTTTTA
GACGTTCGATTCAACAAGTGAGCCGAGCACGTTCTGGATAGAAAAAGTTA
CGGCGGTCCTCCAAACCACCCCGTTTCTGGTGCCGCTCGCATACTTGTCG
AGCCTGCGCTAGTTCTTCCGACCGCTCGTACTGATTATTTCTCCCTCTCA
GGGTCCAGGGCACGTGTCAGTCAACAAGGAAGGACCCGCAGACGCCTACA
CAATGGTTGCACTTTGGTTGACCACCGCCCCCAGAGAACTTGGGGGGCGG
AGCGAGATAACCACCGTGTCACGGCGTTCCGTCGAGCACGGGGCGGGGAA
TGCGCCCCCTAAAGCCATGTCTGATACCTCGTCTGTTGGTCTTGCACAGA
AAATGGTCCTCATTCCTGGCGCAACCACACCAGCCAGGAACTACAGGGTA
TGCCCGTTGATGTAGCCGACCGTTACCCCATGCTAATTCCTCGCTTTCCT
GGCCTACCATCAGGGTCTCTGCCGTGCGTCAGGTCGAGTTCCTGCAGGGG
TGTCAGTTTCTTCACACCGTCGTTTTGGAAGGGAACCCCGTGGACCGGCT
CGAGGCCTATCGCGCCCGAGTGATATTCCGGCTGCAGGGGCTGATGCTCC
TCGACAGGAACAAGGTGACGGCAATCTGCCGCAGTAAACCACTCCCCTGA
TTCCAAGGCCATTGCTGTTCTAGAAGGAGGGCACCATTGTTGCTAAGAAC
CGGAGTCGCTGCGTGCATATCAATTGCCTATTTTTGTGTTTGTCGTTGTC
GCGAGATTTCGGGCGAGATTGCAACGGTCGTACCGATGTAAGAATATCAA
GGTAAACTAGTCTGCCCTGTAAAATTGCCGTAAAGCCGCAATTTCAGGCT
CGTTATACCGCCAGAACACACATCGCATCGAAGCTGCGAAATGCACTGGT
GCACAAATCGCCACCACGTATTCGAGCCGCCCGGATAAGTTCCCCTCCTC
AGTACCATGGCATCATCTGAGATGCGATCGCGACAAGAAGCATGCTGTGT
ACTTCGTACATCATATCTCCGACTTCAAATAACCAACTTTGCGCCCCCGG
CACGTCATTACGGGACCCACTCCCGACCGTTAGATACCCCCCGAGGAGAA
GGTGAAGGCGGTAAATCTCATGGGGGACGAAGAAAGTGATCTCCCGCACA
GGAAGCAGGTATGCAGCGCACGGGAAATCGAGAGCGTGTCGTTCTTTGGC
GAAACATAATCGAGTCTAGATTGATATCCTCAGGCAGGCAAACCGAATTG
CACCAAACACGCAGGCCGTCGTCCCCAAGTGCTTTTGTCCACGGCGTTGT
CTCTATCCGGCACATCAACAGCCCTCGAGACTTGGGCCTTTGCCAACCAC
ATTCCTCAAAAGTGTGTCTCCCTCTTCTCTGTCTCCTTTGCTCACTCCTC
TTTGCCTCGCTATCTCTGGCCTCAACTCGAAAAAATAAATAATGAATGTG
CGGTCGGCAGATTTTCGAGGAATACCTACCAGGAGTCGACTTCACGAACC
CCTTGCCCCCATTCTGCGAGCCGGAGCCCGCCCCGGTGGCGGAACGCCCG
GACTCGACGGGCAGCGTCGACGGAACAAGCGACATCCCGGGAGGATCCCG
AGTAGTGTGTGAGGACGGAGTTGTT
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Coding sequence (CDS) from alignment at P-fluviatile_contig80:159385..164059+

>mRNA_P-fluviatile_contig80.14730.1 ID=mRNA_P-fluviatile_contig80.14730.1|Name=mRNA_P-fluviatile_contig80.14730.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2784bp|location=Sequence derived from alignment at P-fluviatile_contig80:159385..164059+ (Porterinema fluviatile SAG_2381)
ATGCATGGGTTTACAGCGGAAGAGGCGGCAGGGCGCATACAAGCCGTGCA
GCGAGGACGCCTTGCTCGGTTGTCTGCTGATCGTCGAAGGCGAAGCCTAG
TTCGCAGGGAAACAACAGCGCGATGGGAAAGGGAGCAAGCGGTCATCAAG
ATACAGATGCATGGGTTTACAGCGGAAGAGGCGGCAGGGCGCATACAAGC
CGTGCAGCGAGGACGCCTTGCTCGGTTGTCTGCTGATCGTCGAAGGCGAA
GCCTAGTTCGCAGGGAAACAACAGCGCGATGGGAAAGGGAGCAAGCGGTC
ATCAAGATACAGGCCGCATGTCGGGGTACAAGAGGTCGAGAAGAGACGGC
GCGTTACCGACAGCAACAGGCTGCAGCATCAAAGATCCAGGCCAGAATAC
GTGGCGACAGGGCGCGCAAGAACTTTAGCCGAACGGCACCCGGGGGCCTC
CCGCTCGATCGAGCGGATATAAAAAAAGGCCTTCATACCCTCGGCCGGAA
CCCGCACGACTTGCGCCTCTGTTACATCGGCTTGATGGCTGCAAACGTAG
GGATTTCGAGCATCAATGCGATTGGGGACTTTCCTCTTCTCCAGACCGTA
GATCTGAGCGGCAACTTCATATCAAGCGCGAAGCCCCTGGCGAAGCTGCC
ATTCCTCCAAGACCTCGACATCTCCCACAACTGTCTTACCAGGCCGCATG
TCGGGGTACAAGAGGTCGAGAAGAGACGGCGCGTTACCGACAGCAACAGG
CTGCAGCATCAAAGATCCAGGCCAGAATACGTGGCGACAGGGCGCGCAAG
AACTTTAGCCGAACGGCACCCGGGGGCCTCCCGCTCGATCGAGCGGATAT
AAAAAAAGGCCTTCATACCCTCGGCCGGAACCCGCACGACTTGCGCCTCT
GTTACATCGGCTTGATGGCTGCAAACGTAGGGATTTCGAGCATCAATGCG
ATTGGGGACTTTCCTCTTCTCCAGACCGTAGATCTGAGCGGCAACTTCAT
ATCAAGCGCGAAGCCCCTGGCGAAGCTGCCATTCCTCCAAGACCTCGACA
TCTCCCACAACTGTCTTACCAGCGTCCTTGATTACGAGCTCTTCGAAGGG
GAGGATTTTTCGTGGCGGGCGAGCCAAGAGTGGTTGCACGACTGGCGGTC
TGAGGTCGTGCGATCGATGTCGATGCTCCATCGGGTGAACATTTCATACA
ACAGCGTCCTTGATTACGAGCTCTTCGAAGGGGAGGATTTTTCGTGGCGG
GCGAGCCAAGAGTGGTTGCACGACTGGCGGTCTGAGGTCGTGCGATCGAT
GTCGATGCTCCATCGGGTGAACATTTCATACAACAGCATCGACAGATTGA
GGGACCTGTCGCACCACCGAAACCTCCAAGATCTCGATCTGAGCCACAAC
GCCGTCGAAGTCCTGGAGGGGCTGTCAAGTCTCAAGTACCTACGGATCTT
GAAGATTAACAACAACAGGATACGTCGAATCGAGGGTCTGGATGCATCGA
CAGATTGAGGGACCTGTCGCACCACCGAAACCTCCAAGATCTCGATCTGA
GCCACAACGCCGTCGAAGTCCTGGAGGGGCTGTCAAGTCTCAAGTACCTA
CGGATCTTGAAGATTAACAACAACAGGATACGTCGAATCGAGGGTCTGGA
TGGTTTACCTCTGGTGGAGCTTCACCTCCACTACAATTCCATTCAAAAGA
TAGAAAACGTCGGGTCCGACAAGCTGGCCAACCTCCGCATCCTCCGTCTC
GGCTACAACGCCATCGAAAATCTTTCCAACCTCAAGGGCTGCCAGGCGCT
CACCGTTTTAGACGTTCGATTCAACAAGTTTACCTCTGGTGGAGCTTCAC
CTCCACTACAATTCCATTCAAAAGATAGAAAACGTCGGGTCCGACAAGCT
GGCCAACCTCCGCATCCTCCGTCTCGGCTACAACGCCATCGAAAATCTTT
CCAACCTCAAGGGCTGCCAGGCGCTCACCGTTTTAGACGTTCGATTCAAC
AAGGTCTCTGCCGTGCGTCAGGTCGAGTTCCTGCAGGGGTGTCAGTTTCT
TCACACCGTCGTTTTGGAAGGGAACCCCGTGGACCGGCTCGAGGCCTATC
GCGCCCGAGTGATATTCCGGCTGCAGGGGCTGATGCTCCTCGACAGGAAC
AAGGGTCTCTGCCGTGCGTCAGGTCGAGTTCCTGCAGGGGTGTCAGTTTC
TTCACACCGTCGTTTTGGAAGGGAACCCCGTGGACCGGCTCGAGGCCTAT
CGCGCCCGAGTGATATTCCGGCTGCAGGGGCTGATGCTCCTCGACAGGAA
CAAGATACCCCCCGAGGAGAAGGTGAAGGCGGTAAATCTCATGGGGGACG
AAGAAAGTGATCTCCCGCACAGGAAGCAGATACCCCCCGAGGAGAAGGTG
AAGGCGGTAAATCTCATGGGGGACGAAGAAAGTGATCTCCCGCACAGGAA
GCAGATTTTCGAGGAATACCTACCAGGAGTCGACTTCACGAACCCCTTGC
CCCCATTCTGCGAGCCGGAGCCCGCCCCGGTGGCGGAACGCCCGGACTCG
ACGGGCAGCGTCGACGGAACAAGCGACATCCCGGGAGGATCCCGAGTAGT
GTGTGAGGACGGAGTTGTTATTTTCGAGGAATACCTACCAGGAGTCGACT
TCACGAACCCCTTGCCCCCATTCTGCGAGCCGGAGCCCGCCCCGGTGGCG
GAACGCCCGGACTCGACGGGCAGCGTCGACGGAACAAGCGACATCCCGGG
AGGATCCCGAGTAGTGTGTGAGGACGGAGTTGTT
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