mRNA_P-fluviatile_contig80.14728.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14728.1 vs. uniprot
Match: A0A6H5LC44_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LC44_9PHAE) HSP 1 Score: 266 bits (681), Expect = 7.320e-74 Identity = 266/608 (43.75%), Postives = 300/608 (49.34%), Query Frame = 3
Query: 198 MPSRPTSPPHSTSPPSGQAMVVGSGPLQNLKQQTQLQAAAS-----ILRRESTQARRASTACDGDQVVPAV-RPEGTRKGRFQIREVRAASIAEGMNSLACQGALSPHEEGEYAIAIVQDGKLVPSPLSTPRSRTRTKTEGDSVHAMTLAGLGDSNTEVVANAMASAAVAAAVSSSPGVTGFGSTGGIGTETSSSLYQSXXXXXXXXXXXXXXXXXXXGGEPVNRQRGRFKLRDIREVSTXXXXXXXXXXXXXPALGSCGVAGAGEQQHERNAPSLLCSTSSVVVTTRQDADTSTSANGAAATGADVQATLLLLVEQNRQLLERIATCAA--GSGLDLSXXXXXXXXXXXXXXXXXXXXXXXXXGRTEQRMMDRHRTASMSALTLQAPLPPKXXXXXXXXNGAIAERRESPCRDGIPPGWWGSQQQGXXXXXXPPPRRPTSAGLGRNEMGIGASGXXXXXXXXXXXXXXGGTSGSLQGGTGXXXXXXXXXXXXXXXXXARMKDDGTGRRAERGRLSTLLDQLKDEIEFHAATKRDMDLELKRVRQRHRLMEDRVTEEKQKASAAEAKAAKLQAKNNKLVDENTHLRQILLQIQDAGVLQQDPGSASQS 1997
M S PTSPP STSP GQ + G+ +L+QQT L A +S ++RRE RRAS +CDG+ + AV R EGTRKGRFQIREVRA SIAEG S AC+ ALS E+ E+AIAIVQDGKLVPSPLSTPR+R R++TE DS+ T + D N + VANA T FGSTGG + S++ Y S EP RQRGRFKLRDIREVS PA G G QQH+ S S +LE+IA S LD+S T S X XXXXX PG PPRRP SAG+GRNEMG+ XXXXXX GSLQG XXXXXXXXX G GRRAERGRLSTLLDQLKDEI+FHAA KRDMDLELKRVRQRHRLMEDR EEKQK +A+EAK AKLQAKN L +ENT L+QIL QIQDAGVL Q+ G ASQS
Sbjct: 1 MSSLPTSPPLSTSPSLGQPLTSGASNTHSLQQQTPLHATSSAEGSTMMRREVAP-RRASASCDGENMATAVARAEGTRKGRFQIREVRA-SIAEGAQSSACRAALSLQEDAEHAIAIVQDGKLVPSPLSTPRARRRSQTEDDSIQQTT--AVSDGNIQAVANAXXXXXXXXXXXXXXXATTFGSTGG-NSPDSATAYPSA------------------AAEPAKRQRGRFKLRDIREVSASVSTSSSSTS---PAGGV--FLGPNGQQHQXXXXXXXXS--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLEKIAAXXXXXSSALDVS-------------------------------------TGSAGXXXXXXXX---XGNXXXXXXXXXXXXXXXXXXXXXXPGQ--------------PPRRPASAGIGRNEMGVXXXXXXXXXX------------GSLQG-----------XXXXXXXXXXXXXXAGXGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAKNKFLSEENTKLKQILQQIQDAGVLPQEAGGASQS 501
BLAST of mRNA_P-fluviatile_contig80.14728.1 vs. uniprot
Match: D7FQ62_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ62_ECTSI) HSP 1 Score: 144 bits (364), Expect = 5.790e-36 Identity = 79/95 (83.16%), Postives = 85/95 (89.47%), Query Frame = 3
Query: 1671 RMKDDGTGRRAERGRLSTLLDQLKDEIEFHAATKRDMDLELKRVRQRHRLMEDRVTEEKQKASAAEAKAAKLQAKNNKLVDENTHLRQILLQIQD 1955
R+KDDGTGRRAERGRLSTLLDQLKDEI+FHAA KRDMDLELKRVRQRHRLMEDR EEKQK +A+EAK AKLQAKN L +ENT L+QIL QIQD
Sbjct: 38 RVKDDGTGRRAERGRLSTLLDQLKDEIDFHAAAKRDMDLELKRVRQRHRLMEDRAAEEKQKTAASEAKVAKLQAKNKFLSEENTKLKQILQQIQD 132 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14728.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig80.14728.1 >prot_P-fluviatile_contig80.14728.1 ID=prot_P-fluviatile_contig80.14728.1|Name=mRNA_P-fluviatile_contig80.14728.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=751bp MPSRPTSPPHSTSPPSGQAMVVGSGPLQNLKQQTQLQAAASILRRESTQAback to top mRNA from alignment at P-fluviatile_contig80:142597..148785- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig80.14728.1 ID=mRNA_P-fluviatile_contig80.14728.1|Name=mRNA_P-fluviatile_contig80.14728.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6189bp|location=Sequence derived from alignment at P-fluviatile_contig80:142597..148785- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig80:142597..148785- >mRNA_P-fluviatile_contig80.14728.1 ID=mRNA_P-fluviatile_contig80.14728.1|Name=mRNA_P-fluviatile_contig80.14728.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4506bp|location=Sequence derived from alignment at P-fluviatile_contig80:142597..148785- (Porterinema fluviatile SAG_2381)back to top |