mRNA_P-fluviatile_contig80.14708.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A6H5JVE7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE7_9PHAE) HSP 1 Score: 396 bits (1017), Expect = 1.800e-123 Identity = 250/405 (61.73%), Postives = 280/405 (69.14%), Query Frame = 2
Query: 44 LRGPGWLPSILFISVVALCCRHGTSLVPGPRRSVLAPPRCGRPSSAVFPGYP-RSACP-LSCSIGNPFRLSRVAHLRGGSLGTGGIGRVGDELLSAPGNGGEAADNKKRADAAKKKSAWPL-GVSEHDGKISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFTLSMGVTGAAGATASAQYLAVAIYGALLWRGARAREEGKRMAVPFFAP--------------RGTKGLGGRKAERGEGGQSGARGLVAPGDGDLGECGYATQ 1207
L G GW IL++S +ALCCR+GTSL+PG V+ R +P RS CP L +P RLSR++ LRGG+ + D S G G+ A+N+ +A KK+ W L GVS+HDG+ISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKS+A+G+E++AGQIVQQMYVIACVLG GLQV LLTQAP ILAL LK+RALAAPAVLLIMVSEGVFRGHADT APAVAALSAA NI+LDPVFMFTLSMGV GAAGATA AQYLAVAIYGA+LWRGAR EG RMAVPFF ARG+VA GDGD+GEC YA+Q
Sbjct: 5 LYGIGWTQVILYVSSLALCCRYGTSLLPG----VVLQGRSAAARGFQQRHHPLRSNCPRLPPGEPDPVRLSRLSRLRGGAQ-PAEVYVADDSNESYAGGNGDGAENQAKAGDMKKEGKWLLLGVSQHDGQISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSLAAGNEEEAGQIVQQMYVIACVLGVGLQVTLLTQAPSILALMGAGPKTALFREASGYLKVRALAAPAVLLIMVSEGVFRGHADTRAPAVAALSAAVTNILLDPVFMFTLSMGVAGAAGATAFAQYLAVAIYGAMLWRGAR---EG-RMAVPFFGAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNISARGVVALGDGDIGECSYASQ 400
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: D7FUX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUX8_ECTSI) HSP 1 Score: 264 bits (675), Expect = 4.860e-77 Identity = 149/171 (87.13%), Postives = 159/171 (92.98%), Query Frame = 3
Query: 1146 APAAWSLLATVISANAAMLLRTTSLMACWAVATAVATRMSAAAVGAHQVALSLWLLFALVAEAPSIAAQVLGARYIAQGKLETARSMGRRVCTLTLACSAVLATALLSLSGVIPSGFTSDPEVLRRLYRLLPLLAFQQPLIAMTLVAEGLLVGAGEFRWLGTTTVCTSAVA 1658
APAAWSLL TVISANAAMLLRTTSLMACWAVATAVATRMS+AAVGAHQVALSLWLLFAL+AEAPSIAAQVLGARYIAQGKLE ARSM RRV TLTLACS LAT+LL LSGVIP FTSDPEVL+RL++LLPLLA QQPL+A+TLVAEGLLVGAG+FRWL TTTV +SAVA
Sbjct: 159 APAAWSLLVTVISANAAMLLRTTSLMACWAVATAVATRMSSAAVGAHQVALSLWLLFALIAEAPSIAAQVLGARYIAQGKLENARSMARRVLTLTLACSGFLATSLLCLSGVIPRCFTSDPEVLKRLHQLLPLLAVQQPLVALTLVAEGLLVGAGQFRWLATTTVGSSAVA 329
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A835YXE7_9STRA (Mate-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXE7_9STRA) HSP 1 Score: 255 bits (652), Expect = 2.030e-72 Identity = 142/233 (60.94%), Postives = 169/233 (72.53%), Query Frame = 3
Query: 1107 GVERRSGGKGGNPAPAAWSLLATVISANAAMLLRTTSLMACWAVATAVATRMSAAAVGAHQVALSLWLLFALVAEAPSIAAQVLGARYIAQGKLETARSMGRRVCTLTLACSAVLATALLSLSGVIPSGFTSDPEVLRRLYRLLPLLAFQQPLIAMTLVAEGLLVGAGEFRWLGTTTVCTSAVAAWFILMVGRRAPAWDVLGVWGGITAMFVGRLLAATWRVMDRKRGPYWVP 1805
G E R+GG AP LL V+ ANAAML+RT SLMACWA AT+VATRM VGAHQVALS+WLL ALVAEAPSIAAQVLGARY+ +G+L AR+M RV LT+A A+L AL + G +P+ FT DP + R+ L+PLLA QQPL+A TL+ EGLLVGA +FRWLG TT+ T++V +L VGR P V+GVW GIT MFVGR L A WR++DRKRGPYWVP
Sbjct: 208 GGEGRAGG-----APRGLELLRVVLFANAAMLVRTVSLMACWAAATSVATRMGTVHVGAHQVALSVWLLLALVAEAPSIAAQVLGARYLGRGELRAARAMAARVVALTVASGALLGAALAAARGALPAAFTRDPALAARIGALVPLLALQQPLVAATLLMEGLLVGAQQFRWLGATTLVTTSVGTAAVLAVGRLRPEAGVVGVWWGITGMFVGRFLGAAWRLLDRKRGPYWVP 435
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A7S3XLC3_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLC3_HETAK) HSP 1 Score: 188 bits (478), Expect = 9.970e-48 Identity = 109/210 (51.90%), Postives = 134/210 (63.81%), Query Frame = 2
Query: 404 VSEHDGKISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFTLSMGVTGAAGATASAQYLAVAIYGALLWR 1033
++EHD I + LPAL+ ++DP +SL+D+AY GR LGA SLAALGPCTSIFHFSFNTFR+LT +TTALV K +A ++QAGQ+ +Q +A LG AL A L L LK+RAL AP VL +M EG+FRGH DTL P VA +AA N LDP+ MF L MGV+GAA AT A+ +A IYG LL R
Sbjct: 1 MNEHDRDIRDITLPALVGAMIDPAMSLIDSAYAGR-LGATSLAALGPCTSIFHFSFNTFRALTFTTTALVAKYVAMNRKEQAGQVGKQSLALALTLGLLTAGALAALATPFLRLMGVGARSPLLPHALPYLKVRALVAPVVLCMMAMEGIFRGHGDTLTPLVAGAAAAAVNFSLDPILMFRLGMGVSGAAAATCIAEVVAAGIYGFLLLR 209
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: W7TRZ3_9STRA (Mate efflux family protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRZ3_9STRA) HSP 1 Score: 179 bits (454), Expect = 6.220e-46 Identity = 108/216 (50.00%), Postives = 135/216 (62.50%), Query Frame = 2
Query: 401 GVSEHDGKISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFT------LSMGVTGAAGATASAQYLAVAIYGALLW 1030
G+SEHD +I+ ++LPAL++LLVDP LSL DTAYV R LG + LA LGPCTSIFH SFN FR+ +QSTTALV ++A D + +V Q V+ACVLG + L QA ILAL LK+RALAAPAVL++MV EG +RG ADTL P + A N+VLDP +F GV GAA AT +AQY+ + Y LL+
Sbjct: 146 GMSEHDAEIARISLPALLTLLVDPFLSLCDTAYVSR-LGTLPLACLGPCTSIFHLSFNGFRAFSQSTTALVSGALAQQDRDRVRAVVVQALVLACVLGTLVSAVLNVQATRILALMGAPAGSRLSATGLPYLKVRALAAPAVLMLMVGEGAYRGFADTLTPLPITFTVALVNLVLDPWLIFRGGWGGGRGWGVAGAAWATVAAQYVGLTAYLVLLF 360
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A4D9CNC1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CNC1_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.040e-39 Identity = 94/181 (51.93%), Postives = 118/181 (65.19%), Query Frame = 2
Query: 401 GVSEHDGKISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMF 943
G+SEHD +I+ ++LPAL++LLVDP LSL DTAYV R LG + LA LGPCTSIFH SFN FR+ +QSTTALV ++A D + +V Q ++ACVLG + L QA ILAL LK+RALAAPAVL++MV EG +RG ADTL P + A N+VLDP +F
Sbjct: 154 GMSEHDAEIARISLPALLTLLVDPFLSLCDTAYVSR-LGTLPLACLGPCTSIFHLSFNGFRAFSQSTTALVSGALAQQDRDRVRAVVVQALILACVLGTLVSAVLNIQATRILALMGAPAGSRLSATGLPYLKVRALAAPAVLMLMVGEGAYRGFADTLTPLPITFTVALVNLVLDPWLIF 333
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A0G4EWE7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EWE7_VITBC) HSP 1 Score: 160 bits (406), Expect = 6.340e-38 Identity = 101/226 (44.69%), Postives = 128/226 (56.64%), Query Frame = 2
Query: 404 VSEHDGKISALALPALMSLLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXX--LKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFTLSMGVTGAAGATASAQYLAVAIYGALLWRGARAREEGKRMAVP 1075
VS I L++PAL+ LVDP LS +D YVGRGLGA SLAALGPC SIFH SF FR+L QSTT+LV +++ + D +AG++V Q +A +G + AL IL LK RA AAP+V+ V+EG FRG DT P A+L AA N++LDP+ +F+ G GAA ATA AQY A Y L +R R E R+ VP
Sbjct: 111 VSHLQKTIRDLSVPALLGNLVDPALSTIDNIYVGRGLGATSLAALGPCISIFHVSFGIFRALMQSTTSLVARALGARDNDRAGELVVQSSFLAVGMGVIIAAALQLLCGPILGCMGVGAVGVDPLALDARAYLKARAWAAPSVVFTQVAEGAFRGFGDTKTPLFASLLAAVVNLILDPIMIFSCQWGTAGAAAATAVAQYAAALTYAVLFYR----RRESMRLKVP 332
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: B7GCL3_PHATC (Uncharacterized protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCL3_PHATC) HSP 1 Score: 149 bits (377), Expect = 5.720e-35 Identity = 90/192 (46.88%), Postives = 117/192 (60.94%), Query Frame = 2
Query: 458 LLVDPILSLVDTAYVGRGLGAISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFTLSMGVTGAAGATASAQYLAVAIYGALLWR 1033
+L DP+LSL+DTAYVGR LG++ LAALG CTSIFH +FN FR+ T +TT+LV + DE++A ++ Q ++ +G + V L ILA L R AAP VL I V+EG FRG+ DT+ P VA+L+AA N+VLDP+ MFTL GV GAA ATA AQ+ A +Y L R
Sbjct: 1 MLADPVLSLIDTAYVGR-LGSVPLAALGACTSIFHLAFNAFRATTAATTSLVSSRLQQ-DEQKAREVTQTSLLLGVTMGLAVAVTLWAAGRPILASMGVPSDSVLFPDACAYLYARCGAAPVVLWIGVAEGAFRGYGDTIVPLVASLTAAAINLVLDPILMFTLGWGVRGAAAATALAQFGAAIVYAVQLKR 190
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A448ZSW3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSW3_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.500e-33 Identity = 91/202 (45.05%), Postives = 123/202 (60.89%), Query Frame = 2
Query: 431 ALALPALMSLLVDPILSLVDTAYVGRGLG-AISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFTLSMGVTGAAGATASAQYLAVAIYGALLWR 1033
A+ALPALM LL DP+LS+VDTA+VGR +G AI LAALG CTSIFH +F FR+ T +TT+LVG + +++Q +I A +G + ++L +L L R+ AAPAVL ++V+EG FRG+ D+ P VAA AA N++LDP+ MF L MG+ GAA ATA +Q A A+Y LW+
Sbjct: 139 AIALPALMGLLADPLLSIVDTAFVGRSVGGAIDLAALGVCTSIFHMAFTVFRASTVATTSLVGSASTPEEKRQTTKISMGF---ALAMGTLVFLSLRLAGGHMLTGMAVAPNSDVFRSACSYLYTRSWAAPAVLFVLVAEGAFRGNGDSKTPLVAASVAAVVNLILDPLLMFPLRMGMAGAAAATAISQIAAAALYAWRLWK 337
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Match: A0A7S4A8V8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8V8_9STRA) HSP 1 Score: 144 bits (364), Expect = 3.260e-32 Identity = 93/202 (46.04%), Postives = 125/202 (61.88%), Query Frame = 2
Query: 431 ALALPALMSLLVDPILSLVDTAYVGRGLG-AISLAALGPCTSIFHFSFNTFRSLTQSTTALVGKSMASGDEKQAGQIVQQMYVIACVLGAGLQVALLTQAPGILALXXXXXXXXXXXXXXXXLKMRALAAPAVLLIMVSEGVFRGHADTLAPAVAALSAAGANIVLDPVFMFTLSMGVTGAAGATASAQYLAVAIYGALLWR 1033
A+ALPAL+ LLVDP+LS+VDTA++GR G A LAALG CTSIFH +F FR+ T +TT+LVG S ++ +EK+ QI + + A +G + +AL +L L RA AAPAV+ I+V+EG FRG+ D P VAA AA N++LDP+ MF + MG+ GAA ATA +Q A A+Y LW+
Sbjct: 195 AIALPALVGLLVDPLLSIVDTAFIGRSAGGATDLAALGVCTSIFHMAFTVFRASTVATTSLVG-SASTPEEKR--QITKISFGFAFTMGILVFLALRLAGGHMLTGMALSPNSPVFHSACSYLFTRAWAAPAVVFIVVAEGAFRGNGDNKTPLVAASVAAVVNLILDPLLMFPMGMGMAGAAAATAISQLAAAAMYAWRLWK 393 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig80.14708.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig80.14708.1 >prot_P-fluviatile_contig80.14708.1 ID=prot_P-fluviatile_contig80.14708.1|Name=mRNA_P-fluviatile_contig80.14708.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=431bp MCLRGPGWLPSILFISVVALCCRHGTSLVPGPRRSVLAPPRCGRPSSAVFback to top mRNA from alignment at P-fluviatile_contig80:11652..20397+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig80.14708.1 ID=mRNA_P-fluviatile_contig80.14708.1|Name=mRNA_P-fluviatile_contig80.14708.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8746bp|location=Sequence derived from alignment at P-fluviatile_contig80:11652..20397+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig80:11652..20397+ >mRNA_P-fluviatile_contig80.14708.1 ID=mRNA_P-fluviatile_contig80.14708.1|Name=mRNA_P-fluviatile_contig80.14708.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2586bp|location=Sequence derived from alignment at P-fluviatile_contig80:11652..20397+ (Porterinema fluviatile SAG_2381)back to top |