mRNA_P-fluviatile_contig8.14702.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14702.1
Unique NamemRNA_P-fluviatile_contig8.14702.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: D7G234_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G234_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 1.540e-117
Identity = 202/300 (67.33%), Postives = 238/300 (79.33%), Query Frame = 1
Query:  100 MKAVAGLTAFVFGKTADAFVATTSTSIAGWAAASAGSSVCKAGPADHWCGRTGFARRCPGGVCMAASSELDQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTTGVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVPK 999
            MK    LT   FG T    V+   +     AAA   SSVC+A   + W    GFARR   G+CMA +SELDQSAEYVKAELARVQEEYEA RKAKI++QTR+AA RGDAAVTPLA+LEF  FLDKDGKV+++DT GVKASV+AV+DESKTLR+IGVSRGIQQ+LRL+LARRP +TYYFK+QNITRPSRSLLEIIKESWIEENGSTP GN D+ SQA WE +IN +P+FTEED A VA  +EKG+ED G K +A RFE+EI+EILE+RG  E+ RFDPKLK +GLLD+KM   KP+++VPK
Sbjct:    1 MKLTMVLTLLAFGNTRAFLVSAPLSGRTAAAAAMGTSSVCRA---EDW---AGFARRRSAGLCMATNSELDQSAEYVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLEFHSFLDKDGKVASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPKDTYYFKVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGKEDRGLKKIAGRFENEILEILEERGVKESIRFDPKLKGRGLLDVKMP--KPDSSVPK 292          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A836CJ14_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ14_9STRA)

HSP 1 Score: 208 bits (530), Expect = 1.040e-58
Identity = 120/235 (51.06%), Postives = 156/235 (66.38%), Query Frame = 1
Query:  295 ASSELDQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTT-GVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            A S LD  A+YVK +L   +  YEAKR+A   Q  + +  RGD AV PL+ L  IP+L+++G VS V    GVKASV+AV+D +  L++IGVSR +QQ+LRL LAR P  T+  ++Q+IT PSRSLLE+IK+ W  ENG  P GN     QA+WE  ++  P+ TEEDK  + + REKGRED   K +ARRFE   +EI+E RG  E  RFDPKLK +GLLDL      P+T+VP
Sbjct:   42 ARSNLDADADYVKQQLKLKEAAYEAKRRADAAQSAKRS--RGDTAVDPLSSLPMIPYLNEEGLVSDVGAARGVKASVYAVYDATPALQYIGVSRSVQQSLRLHLARCPELTHSVRVQHITTPSRSLLEVIKDEWCAENGGAPPGNDGGAEQARWEMPMDVKPLMTEEDKEKLMTAREKGREDSAIKAIARRFEAAKVEIMEARGVKENMRFDPKLKGQGLLDLWQPG--PDTSVP 272          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A4D9CSA1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSA1_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.580e-50
Identity = 109/237 (45.99%), Postives = 159/237 (67.09%), Query Frame = 1
Query:  298 SSELDQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAA--VTPLAELEFIPFLDKDGKVSTVDTTG-VKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGR-EDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            S+ LD  A++VKAELAR ++EY+A  KA+I      A    D A  + PL  L ++P+LD+ GK++       VKASV+A++DES+T+R+IGVSR + Q+LRL LAR P +TY F++ +I++P+R LLEI +++W+++ G  P GN +  +Q  WES+++  P+  E D A + + R K R E+   K V RRFE+  I +L  RG TE+ RFDPKLK KGLLDL +  Q P++AVP
Sbjct:   48 SASLDDQADFVKAELARKKQEYDASLKARISASVANA----DVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVAQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQ-PDSAVP 279          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: K8YTT3_NANGC (Protein atypical group n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YTT3_NANGC)

HSP 1 Score: 187 bits (474), Expect = 1.630e-48
Identity = 109/237 (45.99%), Postives = 159/237 (67.09%), Query Frame = 1
Query:  298 SSELDQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAA--VTPLAELEFIPFLDKDGKVSTVDTTG-VKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGR-EDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            S+ LD  A++VKAELAR ++EY+A  KA+I      A    D A  + PL  L ++P+LD+ GK++       VKASV+A++DES+T+R+IGVSR + Q+LRL LAR P +TY F++ +I++P+R LLEI +++W+++ G  P GN +  +Q  WES+++  P+  E D A + + R K R E+   K V RRFE+  I +L  RG TE+ RFDPKLK KGLLDL +  Q P++AVP
Sbjct:   48 SASLDDQADFVKAELARKKQEYDASLKARISASVANA----DVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQ-PDSAVP 279          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A0G4GGJ4_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GGJ4_VITBC)

HSP 1 Score: 167 bits (424), Expect = 5.020e-44
Identity = 98/226 (43.36%), Postives = 143/226 (63.27%), Query Frame = 1
Query:  322 EYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTT-GVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            EY K +L   +  Y  + + +++ +T      GD ++  L+ L  +P+L  DGKV++ D T GVKASV+A++DE KTL+ +GV+R I+Q+L L LAR P  T+Y K+ +I RP+RSLLE+IK+SW++E+G+ P GN   + Q  WE  ++  P+ T+ED+   A   +KG+       VARR+E E  E+LE R  TE  RFDPKLK +GL DL +   KP   VP
Sbjct:    7 EYTKQQLKEKESRYHHELQQRLKAETDRLRASGDVSIPSLSSLPLMPYLTPDGKVTSADVTPGVKASVYAIYDEGKTLQHVGVTRSIRQSLLLHLARMPQLTHYVKVHHILRPNRSLLELIKQSWLDESGNIPPGNRPPD-QELWEHPLDIKPLMTDEDRERYAEKEQKGKGFNVYLEVARRYEAEKKEVLEARHVTEEVRFDPKLKRQGLSDLLIP--KPKDEVP 229          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A2K1K7G9_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7G9_PHYPA)

HSP 1 Score: 164 bits (415), Expect = 1.380e-42
Identity = 94/229 (41.05%), Postives = 142/229 (62.01%), Query Frame = 1
Query:  310 DQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTTGVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            D+  E  +   A+ QEEY      K Q   R  + +G   V+ L+ LE+IP+L ++G ++     G KAS++A+FDE+KTL FIG+SR + Q++RL  ARRP + YY K+ ++++PSR+LLE  +++WI ENGS P GN + E Q  WE++++  P  T+E+K           +    K VARR E ++  I ++R  T+  RFDPKLK + LLDLK  + KP+T+VP
Sbjct:   27 DEHQERTRQATAQAQEEYR-----KRQDALRRQSMQGGEGVS-LSSLEYIPYLTEEGHIADCTEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEAAPGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVP 249          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A388KW50_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KW50_CHABU)

HSP 1 Score: 167 bits (423), Expect = 3.040e-42
Identity = 86/205 (41.95%), Postives = 132/205 (64.39%), Query Frame = 1
Query:  382 KIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTTGVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            ++QQQ + +    D +V  L +LE+ P++ ++GK+      G KASVFAVFDE KTL+++G+SR + Q++RL  AR P++ ++ K+ +I  PSR++LE I+ +WI EN + P GN   E Q  WE++++  P+ T+E+K  +    E  +     K VARR E +++E  + R  +ET RFDPKLK KGLLDLK     P+T+VP
Sbjct:  174 RLQQQHQRSGTGADKSVVRLRDLEYQPYVTEEGKIVDCTKAGAKASVFAVFDEDKTLQYVGMSRQVYQSMRLHFARMPSKCHFVKVVHIASPSRAVLESIQTAWITENDTRPPGNDGGEIQHLWENALDCKPLMTDEEKELIEKTEEGPKRARTLKNVARRIESQLVEQFKLRNVSETLRFDPKLKEKGLLDLKSTQYVPDTSVP 378          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A1Y1IDT5_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IDT5_KLENI)

HSP 1 Score: 162 bits (410), Expect = 3.380e-41
Identity = 96/230 (41.74%), Postives = 135/230 (58.70%), Query Frame = 1
Query:  310 DQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTTGVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVPK 999
            DQ AE  +A  A  + EYE +      Q     A RG A VTPLAEL  +PFL ++GK++       KASV+A+FDE K +R +G+SR I  +LRL  AR P + +  K+Q+I  P RS LE I+++WI E G  P+GN +   Q +WE+ ++  P+ T+++KA V             K VARR E E+      R +TE+ RFDPKLK KG+LD+K  +  P+T VP+
Sbjct:   84 DQHAEATRAATAAAKAEYERR------QAAARRAGRGAAPVTPLAELPLVPFLTEEGKIADCSQADAKASVYAIFDEEKVVRHVGISRAIGPSLRLHFARVPLQCWAVKVQHIKAPRRSALEAIRDAWIAELGYRPTGNDNGPEQNRWENPLDVRPLMTDDEKAAVEEAAPGPPTAKALKQVARRVEAELKASYAARQSTESLRFDPKLKEKGMLDVKNPAPPPDTKVPE 307          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A176W0C8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W0C8_MARPO)

HSP 1 Score: 155 bits (393), Expect = 1.350e-38
Identity = 92/253 (36.36%), Postives = 150/253 (59.29%), Query Frame = 1
Query:  265 RRCPGGVCMAASSE---------LDQSAEYVKAELARVQEEYEAKRKAKIQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTTGVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPNTAVP 996
            R+ P G  +A+S+E          D+ A   +   A  QEEY  K+  + +QQ       G   V  L  +E+ P+L ++G ++ +    +KASV+A+FD++KTL+++GV+R + Q++RL  AR P++ +Y K+Q+++RPSR+LLE I++ WI +NGS P GN + E Q +WE+ ++     T+E+   +        +    K VARR E  ++   E+R  T+  RF+PKLK +GLLDLK    KP+++VP
Sbjct:   77 RQSPVGAAVASSAEPKWKQKLAAADEHAAATRQATALAQEEYFKKQAEQRRQQA------GAGLVEKLDSMEYTPYLTEEGLIADITKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEAAPGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVP 323          
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Match: A0A8K1MS18_9CYAN (GIY-YIG nuclease family protein n=2 Tax=Oscillatoriales TaxID=1150 RepID=A0A8K1MS18_9CYAN)

HSP 1 Score: 144 bits (362), Expect = 4.390e-36
Identity = 76/175 (43.43%), Postives = 115/175 (65.71%), Query Frame = 1
Query:  439 LAELEFIPFLDKDGKVSTVDTTGVKASVFAVFDESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIKESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGREDMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLK 963
            L +LE  P+L  DG VS     G K  ++A+FDE +TL+F+G SR +  +LR  L R+P + Y FK++ I RPSR +LE I++ W++ENG  P GN   E++A+W   I+  P+ T+E++  +A   ++G++    K VARR +  ++E L  RG TE+FRF+PKLK +GLL+LK
Sbjct:   14 LQDLERHPYLTPDGSVSDDFLVG-KVGIYAIFDEQETLQFVGYSRNVSVSLRQHLIRKPEDCYSFKVETIARPSRQVLEDIRQHWLQENGMVPPGN--GEAEAEWTQPIDVKPLMTDEERNGLAEALDEGKKTKCIKQVARRIQGNLLERLAARGVTESFRFNPKLKEQGLLELK 185          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G234_ECTSI1.540e-11767.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJ14_9STRA1.040e-5851.06Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CSA1_9STRA1.580e-5045.99Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
K8YTT3_NANGC1.630e-4845.99Protein atypical group n=1 Tax=Nannochloropsis gad... [more]
A0A0G4GGJ4_VITBC5.020e-4443.36Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A2K1K7G9_PHYPA1.380e-4241.05Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A388KW50_CHABU3.040e-4241.95Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A1Y1IDT5_KLENI3.380e-4141.74Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A176W0C8_MARPO1.350e-3836.36Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A8K1MS18_9CYAN4.390e-3643.43GIY-YIG nuclease family protein n=2 Tax=Oscillator... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3945008..3952368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score366.3
Seed ortholog evalue1.4e-98
Seed eggNOG ortholog2880.D7G234
EggNOG OGs28NP8@1,2S5YX@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorychloroplast
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_003660.1
Exons7
Model size2016
Cds size918
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817267.3302274-UTR-P-fluviatile_contig8:3945007..39450911622817267.3302274-UTR-P-fluviatile_contig8:3945007..3945091Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3945008..3945091 +
1693571847.8336775-UTR-P-fluviatile_contig8:3945007..39450911693571847.8336775-UTR-P-fluviatile_contig8:3945007..3945091Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3945008..3945091 +
1622817267.409767-UTR-P-fluviatile_contig8:3951354..39523681622817267.409767-UTR-P-fluviatile_contig8:3951354..3952368Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3951355..3952368 +
1693571847.907433-UTR-P-fluviatile_contig8:3951354..39523681693571847.907433-UTR-P-fluviatile_contig8:3951354..3952368Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3951355..3952368 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817267.3410122-CDS-P-fluviatile_contig8:3945091..39453301622817267.3410122-CDS-P-fluviatile_contig8:3945091..3945330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3945092..3945330 +
1693571847.8435092-CDS-P-fluviatile_contig8:3945091..39453301693571847.8435092-CDS-P-fluviatile_contig8:3945091..3945330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3945092..3945330 +
1622817267.351094-CDS-P-fluviatile_contig8:3945956..39460171622817267.351094-CDS-P-fluviatile_contig8:3945956..3946017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3945957..3946017 +
1693571847.8520367-CDS-P-fluviatile_contig8:3945956..39460171693571847.8520367-CDS-P-fluviatile_contig8:3945956..3946017Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3945957..3946017 +
1622817267.360954-CDS-P-fluviatile_contig8:3946593..39467491622817267.360954-CDS-P-fluviatile_contig8:3946593..3946749Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3946594..3946749 +
1693571847.8627307-CDS-P-fluviatile_contig8:3946593..39467491693571847.8627307-CDS-P-fluviatile_contig8:3946593..3946749Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3946594..3946749 +
1622817267.3707087-CDS-P-fluviatile_contig8:3948096..39481921622817267.3707087-CDS-P-fluviatile_contig8:3948096..3948192Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3948097..3948192 +
1693571847.871051-CDS-P-fluviatile_contig8:3948096..39481921693571847.871051-CDS-P-fluviatile_contig8:3948096..3948192Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3948097..3948192 +
1622817267.3804257-CDS-P-fluviatile_contig8:3948910..39490181622817267.3804257-CDS-P-fluviatile_contig8:3948910..3949018Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3948911..3949018 +
1693571847.8790276-CDS-P-fluviatile_contig8:3948910..39490181693571847.8790276-CDS-P-fluviatile_contig8:3948910..3949018Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3948911..3949018 +
1622817267.3901637-CDS-P-fluviatile_contig8:3949701..39498421622817267.3901637-CDS-P-fluviatile_contig8:3949701..3949842Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3949702..3949842 +
1693571847.8878698-CDS-P-fluviatile_contig8:3949701..39498421693571847.8878698-CDS-P-fluviatile_contig8:3949701..3949842Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3949702..3949842 +
1622817267.3998756-CDS-P-fluviatile_contig8:3951237..39513541622817267.3998756-CDS-P-fluviatile_contig8:3951237..3951354Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3951238..3951354 +
1693571847.897144-CDS-P-fluviatile_contig8:3951237..39513541693571847.897144-CDS-P-fluviatile_contig8:3951237..3951354Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3951238..3951354 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14702.1prot_P-fluviatile_contig8.14702.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3945092..3951354 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14702.1

>prot_P-fluviatile_contig8.14702.1 ID=prot_P-fluviatile_contig8.14702.1|Name=mRNA_P-fluviatile_contig8.14702.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=306bp
MLSITMKAVAGLTAFVFGKTADAFVATTSTSIAGWAAASAGSSVCKAGPA
DHWCGRTGFARRCPGGVCMAASSELDQSAEYVKAELARVQEEYEAKRKAK
IQQQTREAAERGDAAVTPLAELEFIPFLDKDGKVSTVDTTGVKASVFAVF
DESKTLRFIGVSRGIQQTLRLTLARRPTETYYFKIQNITRPSRSLLEIIK
ESWIEENGSTPSGNVDQESQAKWESSINTLPMFTEEDKAYVASMREKGRE
DMGTKTVARRFEDEIIEILEKRGATETFRFDPKLKAKGLLDLKMASQKPN
TAVPK*
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mRNA from alignment at P-fluviatile_contig8:3945008..3952368+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14702.1 ID=mRNA_P-fluviatile_contig8.14702.1|Name=mRNA_P-fluviatile_contig8.14702.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7361bp|location=Sequence derived from alignment at P-fluviatile_contig8:3945008..3952368+ (Porterinema fluviatile SAG_2381)
TGCTCTTTCCTGCTGCTCTACCTGCGCTCACTCCGTGTGCTGTTTCTTCG CACAGGCTCATTGATTGAAGGCGAAAGTTATTGAATGCTTTCGATCACCA TGAAAGCGGTAGCAGGGCTGACGGCGTTTGTGTTTGGAAAGACCGCCGAT GCCTTTGTCGCGACGACCAGCACTTCCATCGCCGGCTGGGCCGCGGCTAG CGCGGGGTCTAGCGTTTGCAAAGCCGGCCCTGCTGACCACTGGTGCGGAC GGACAGGGTTTGCACGAAGATGCCCCGGTGGTGTGTGCATGGCCGCGAGC TCGGAGCTGGATCAAAGTGCAGAGTGAGCAGGGATGACATTTATGGATGA TCATGTGTGCGTGGTTGTTCCCTTCCAACGAAACCTGAGAGCTGCTCCTC GGTCCGTTCATGCAACTTACAAGCAAGGGCACAAATGCTGTGTTACCGCA CGTGTCGGGTGATCATGAAGACGCACACGAATAGCAACACTTGATTTGGG TGGCGGGAACAACAATAGACGCGTGTTAAGAATTGGTGCGAGTCTGCGCA TCATCTTCGCCTGATGCAGTGTCCTTTCGACCGATATTGCAACAGGAGAA CGGCAAGTGCAACTTCCCCCCGTTGCCCCTATGATGGATGCACCACACTC GTCCATTCACGTCACGTGTACGTTTTATCCACACAGCGCCGACCTGATCA ATGATTACTCGCCTGAGGCTTGCAGGAAGAGCAACCGACTCTACCCGATG AATGCACTTGTCACTTGTTGCCGTTCGAGAGATGGTCTCGGGGTCGAAAC GGATTCTCAAGAGAAAACAAGCCCCCACGTGTATCAGGAGACACGTTTGC CTAAGCACCTTTTACTTTACATCGACTGCCTTGCTGTCGAGGGATCCATG GCATGTTTGAATCACCGTGTACCCATCACCGAACACCACATTTCTGCAGG TATGTCAAGGCGGAGCTGGCGAGGGTGCAGGAAGAGTACGAAGCCAAGCG CAAGGCGAAGGTGAGTGCGGCGAGTTACACATGAGTCTGCGTATCACACT AGGTTGTGGTAGGCATTCTCGGCTTTGCTCGGCCCGATTGTAGAAGGATC TGTTTGCTATCGTCAGGCCCGGGAGGATTATGAAATGTGCGATGTTGTGA GTAACCAAGATCCTGGTATGGAGACGTGGCTTGATTCTATAGCGCACGCT TTTGCTCTTCTCGGTTTTGATGCGTGCGGCGAGACCAGGCGAACATATTG CGAACATATTGCGGCCTAACCTCGGATCGACCACCTGGATTTTACTCGCC AGGTGATATCCTCCGCGATTAAGATACTCTACCTTTGATTCCATGCCATA TCGATTTCATTGTAAAAATACCCCCTACCCCTCCCACAAATCAGTCCATC GCCTACCGAGTAGAAGGCTATTCCTGAAAAAAAGGTCCAACTTTAGAGCA CAAGCACTCGTGTCGGATTGACCAACCAAGACTCTCGCCCAGAGCTTCGG AAGTTGGTCAAACGTCCGCTCCTGTTCCTCGCCTCTGTCTTTTCTCAACT CTGTTTGTGCTGTTGCATCCTCCTGTTTCGCCGTAGATCCAGCAGCAGAC ACGAGAGGCGGCGGAGAGAGGGGATGCGGCCGTGACTCCCCTGGCCGAGC TGGAGTTTATCCCTTTCTTGGACAAGGACGGGAAAGTTTCGACGGTTGAT ACCACTGGCGTGAAGGCCAGCGTGTTCGCCGTCTTCGACGAGGTTAGAGG CAAGGGGACGCTTGAGTTTTCTTTATCTAAAGCTGAAGTTTTGTATCTGC GGCCGCCTCCTTCTGACGAAGGCAGGGTTTAAACCTCACAGAGTCCGGGG GGGGGGCGGGCGTACATTTAGTTGCTTACTTTCATCATTAACCGTTGACG ACGCATCCCTTTCGAGACGGGGCACCGTAAATACTCCTGATAGAGGCACC TCCAATGTTTGGGCGCTCTTTAAGTTTTTGCCATGCTCTTCATAAGGATT GCTTGCTAACTCTGTCCCCCTCCGGTTTAGCTTTGGCTGGCCACCATCTT TATGAAAGGGATTGTGTTTTCGCTTTCATCGAGTTTGCCAAACTCTCACA TGTCACATCCGATTCTCTACATCTCTCTCTATAAGTCTTCTCCTTCCTGA ATAGCTCACATCCTGCAACTATATACGTTCGACTCTCTTCGGGCTCTCCG CATGGGCATGCCTGTCTATCCTCGTCCATTTCCGTTCTATTGCTGGTGTG TCGTTTCTGTCGTCCTGGAAAGTCCAGATTTCCAACTCGAAATCGCAACC TCAGCTTTTTCGCGCTCTCCATCTTGCCGACCAAATACATTTTCATTCCT CTTCCCTCTTTCAATTTCCCGTACATCGCTAAGTGGTCCTCACTATTCAC CTGGTGGGAGGGGGCACAGGACAGTATTTGAACTGCCTCGGTTACTCCGA TGGACATGGATGCAAGCTCCATGCCACAGGCTTCTGCCTTCAGCCCACAC TTCGCTTAAAGTCCCCCAAGGACACCTGCAAAGGGGGAGGGAGTGGAATA GGCAAAAAATGCCGTGTGCACGGGAAAACATGGTGTGTGTACCATCCGTG TTTACAAATGCGTGTTGGAAGGCAGCCTGTGATCGTCGGTAGGGTATTGT CAGAAGGTGTGTATGAAGCATGTAAGCAGCTACCAAGCACTCCCTCAAAT GTTGGAATGCTCAAAAGCCGGATCGTAGTATTCAAAACCAGCATGCGCTC ACAAAAGCTTCACTTCGCCTCTGAATAACTAAGTATTTCTTCAGCGGTGC CTGCCCTGCGGTAGACCAGGCGTCAAGGGAACAGCAACATCTCGCCGCGG CTAGCGACATTCCTCCCCGCCTAGGATGTGCTATCCCATCCCATTCCATC CCGTTCCGTCCCATCCCATCCCGTCCCATCCCATCCCGTCCCATCCCATC CCATCTCATTCCATACTACTCGACGATCGATTATCCCTAACTCAATCTTT TAATGTGACGACTTGCACCCTGCGACCCGTTCAACGTGGACCCACCGAAA CGTTCGCCACAACACGGAACTCATGGAACCGGACAACAGTCCAAGACCCT GAGATTTATCGGCGTGTCCCGCGGAATCCAGCAGACCCTCCGCTTGACCC TGGCGCGCCGCCCAACCGAAACCTATTACTTCAAGGTCAGTCGAGGTTGG GATGATGTGCTGTGGGATGGGACGAGGTGGGGTGTGTTTAGGCGCGGTGC TGTGCGTGGTGGATGTCGAGGGTGTCGTGGGAGTCGCCGTAGGTTTGATC GCACGGGGTTCGGATTGAGGGGGTGCCTTTTGTTTTATTTACCGTTCAGC TTCTTTCTCGAGAGCAGAGAGCACACTGTTGGATAGCCTAGGAAAGAAGG GAGCACGATGGGTGGTTTAGTCTGTATAGAGCAATGATACGGTCTCGAAG AGGTGAGAGTTTTGACAATCTCTTCCACGTTTTTGGCGTCCATTGATTTG TTCCATCCCAGTGTTCACGATTATTTAGTATCCACCGCGGGTATTCTTGT TGTTGAAGTGGTCAACCGGGACGTGACTTGATGGTGTCGAGCCGAGACGG TCACAGATTTTCTCAGCGTACATGAGTCTGATAGCGATAGCGGACACCAG CTCTGCAACATCCGTAGTGAATCGTGTCCGCACAGTCGATCGATCCACAC GTCCCATGTTGTCCCGCGTATCTCGAGGCCTTGGCGAATTTTCTCGGCGC TGCCTTCCCCTCTCTATCCCCTGGCACGTGCACTGACGCGAGATAAATCC CATGCACTCATCCCGGTTTCCCGCAAACTGTTTGACTGACGGAACTGGAA TGGATTGGATTGGATGGGGTGGGACGCGACTCGACGGGGCTGGACTGGGA CAGATACAAAACATCACACGACCGAGCCGGTCTCTGCTGGAAATCATCAA GGAGTCCTGGATCGAGGAAAACGGCTCCACGCCCAGCGGCAACGTTGATC AAGAGAGCCAGGTACGTCCGCTGCGGCGGCGGTGCCCCCCTCTGTTTCCG GCTGGGTCTCCTGGTGGATGCTGGAAAGACTGAGTTTGCACCAGGCTACC GAAATCAATTGTGACCAGTTTCGTCCGGTGCTCAAGTTCCAGGCGGCTTC ATTTTTGTGTTTTAGGCTTCGTTTCCCACAAACGTTTGGGTTGTAGTTAA AGTGGTGGCGGTTCGCTGCAAGCGGCGTTGTTGGTCAGAAAGGTGCACCT GCTGGACTCACCTTTTAAGTTTTCGGAAGAGGTCAGCCCGGCAGTCGAAT GAAATCAGAGATTGAGGTGTGAGGGCGACTCGAGAGATCGACCATCCGGA ATCAGAATGGAAATGAGACGTAAACATTGCCAGTAAGTGTTCAATGGCGA GTTGGGCGGCCATCGATTGTTTCGGTTTATCTATACCATTCCGAAGGGTG CTGAGTTTCACGAAATCAAAACCAATGCCATATGCCGGCCATACCCTCGA GGTGAAGTGTTCCCCGCCCTCCGACCTCTTTCACATAAAATCGTACCGTC CTGTCGGGGCATTTCGCCGTTAGTCTTGATCAGTCATTGAGTACGATCGC GAGCCTCACAGTTTCCTGCCGCCCACCTCGCTGTCCTTCCACTCGATGTG CCGTTGGGGAACAATGGACATCACGTGCTCATGAATTCTCGAAGGCGAAG TGGGAGAGTTCCATCAACACGCTCCCCATGTTCACCGAGGAGGACAAGGC TTACGTGGCTTCGATGAGGGAGAAGGGGAGAGAAGACATGGGCACCAAGA CGGTCGCGCGGCGATTCGAGGATGAGATCATTGAGGTGCGTGGACCTCCC TCCTCGTTGTTTTTCAGGCCGTTGTGGCACGATGGAGACCTTGGCGGCTC TTGCGAGTCCGTACACGACACAAGATAATACTCCGCCATAAAAAAGCACA TCCCTAACACGATAGCACACCCGGTGATCATATTGTCAATAGGCCGAATG AGCCCGGACACAAAAGTATCGTAGAATCAAGTGTTGAGGGCTTCGGAAGA AAGCACACACCCCCCTCAACAAAACACACCCGGGGCTCTTATCTTCACAA GGCCAAAGCCAAGCGAGCCCCGAACACAAACGTCCTGTAGGATCAAGTAA CAAGGGCTACAGAAGCAACCCTACGCCCTTCAAGAAAACATATCCGGTGC TACAATTATGAAGTCCCAAAATTTCATCACCAGGGTGTACTTTCTTCGGT CGCATACGGTAGCCTTCACCTTGGCTTCTCCTGTCACCGTGCAGGTGTGC TTTTCCCCTCAGTCCTCCCCTCTCCTCTCCCTCTCTCTCTCCTCCCTCCC TCTCTCTCTTCCCTCTTCCCTCGCCCTTTCCCTCTTCTCCTTCTTCCTTT CCTCCTTCTCCTTCTCCCTGTCCTTCTAACCCTTCGCCCTCTCCGCGTCC GTCTCCCTCAACCTCTCCGTCTTCCTCCACCTTTCCGTCTTCCTTTCCAT CTCCGTCTCCCTCTTCCTCTCCATCTTCGTCTCCCTTTTCCTCTCCCACC TCCTCTCCCAACCCCCTTTCCCTCTCTCTCTCCCGCACTTCTCGCCTTTT TGTCACACCGAGCGAAGAGTATGGGGCCTTGAGGAAAGGATGCATCTCAT GGGGGGGCCCTGCTTCCTTACACCCATCTAGCCATCCTTTCCTCCTCCTT TCCTTCTTCGGCAAGACAGACCATGTCACGTTATCTCTTCCAGTATCGAT CAATCGAACGTTTTCCTTCTTCTCCACAACATGCCGACCGTTGTTGACAC AAACACCAGAGCAAGAAGCAGGCATATTTCTGTTTGTTCAACAGCTTGCA ACCAAGTTCGTGGTCACCGCAGGCGCGACAATGTACTTTTTTTGTGTTTT TTCCAAAAGTTAAGCAGAGAGTAAGGTCGAACCAACGAGCGTTTTATCAG ATTTAAGCAGAAAATACAAAAGTTGAACTGCCAAAATTTGAACAATTTAG TTTCCCCCATTTCTCTCTATCCTTGGACTTGAAGCTCGTTTTCGTGCCTG CGGCGACTATTCCAAGAGTACTGTGGGGAGCAATTCCGTGTTTTGCTATT TGTGAAGAGCAATCCACATAGAGCTCGTCTCCGCTCAAGACCACACACCG CCCCATGCTTTCCTTATGTTCAAACGCTTCGTAAACTTCTCCATTTGCAA TATTTTCTCCGCACATGTTTCCTCCGGCAGATCCTCGAGAAGCGGGGCGC GACAGAAACATTCCGGTTTGACCCCAAGCTGAAGGCCAAGGGACTCCTGG ACTTGAAAATGGCAAGCCAAAAGCCAAACACCGCGGTGCCCAAGTAGATT GAGTTGGGCTCCGCAAGCTTCTTGGAAACGACCGATTTTGGCGCTCTCGT GTTCATTAACGGTCGTCGGACCAATTTGGATGACGCTGTTAATGCGTCAT CCGGTATCTCACGCGAGTCTCACGCGCCAAAACGGTATATCTGTCTATTG TTTGGTAGACTTGTCGCTTCTTCACGGGAATATGTAGGCCAACTGATGAT TAGTTTGTTGATGTTTTGTCATGATATCTTTGGGCACGGCATGCCGTACG GGCTATGAGTGGAATAATTAGCGATGGGAGCAATTTCTGACAAGGAAGAT TCCTGCTATTTCTTTTTGAACAATCGGAACAAACTAGCCTGTGCCTCCAT AAGCGGGTGATTTTGGAATTTGAAGGTGAAAGAGGTCCAAGGGTCTAAGG GTAGTGTGGAAACCAAACGCGCCGAATGTCCATTGTGGTTGACCCCGTGC CTCCGCGACTTACGTTTCGAACACCCCCCCAAACCCACCTCAAGGGTGAC TCGTGCATGGCAGCTCACCCTCCATTTCATGCGCGACTTGCCCGAACACC TCGGCATCGTGCGTATGAGCTACTTCCGGTTGAGGTTTGATGGACGTATT CCGTCCCGCGGCTGTGATGGGATGGGACGGGATGGGACGGGATGGGAACG AAAGGGGCTTATGGCTGTGGACGGCATGCAGCCTGGACTGTTTTGCAGTC TAGAATGCTGCCATTCATGGTTGGCGAACGAAAAGGCGTGTGGTTTCTCT GTAAGACTACAAGCTGTGTGTCAAGCGGTTGGAAATCTTAATCTTGCGAC ATTGGACTTGCTCAAAATACCTTCCATCCGAACTCTGAGCACTGTCTCCC TGACGCAGCAGTCTCCAAAGCCGTTTGCTTGGAAAGCTCGCGCTTTTCAT TTTGCGACTCAAGTGTGTCTTGTTTGGCGTGATACTATGCGGAAATTGTA GAAGTGGAATGGTTCCTGTCCATCTCCGCGCTAATCGATAACCAGGACAC CATCATCGCTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3945008..3952368+

>mRNA_P-fluviatile_contig8.14702.1 ID=mRNA_P-fluviatile_contig8.14702.1|Name=mRNA_P-fluviatile_contig8.14702.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1836bp|location=Sequence derived from alignment at P-fluviatile_contig8:3945008..3952368+ (Porterinema fluviatile SAG_2381)
ATGCTTTCGATCACCATGAAAGCGGTAGCAGGGCTGACGGCGTTTGTGTT
TGGAAAGACCGCCGATGCCTTTGTCGCGACGACCAGCACTTCCATCGCCG
GCTGGGCCGCGGCTAGCGCGGGGTCTAGCGTTTGCAAAGCCGGCCCTGCT
GACCACTGGTGCGGACGGACAGGGTTTGCACGAAGATGCCCCGGTGGTGT
GTGCATGGCCGCGAGCTCGGAGCTGGATCAAAGTGCAGAATGCTTTCGAT
CACCATGAAAGCGGTAGCAGGGCTGACGGCGTTTGTGTTTGGAAAGACCG
CCGATGCCTTTGTCGCGACGACCAGCACTTCCATCGCCGGCTGGGCCGCG
GCTAGCGCGGGGTCTAGCGTTTGCAAAGCCGGCCCTGCTGACCACTGGTG
CGGACGGACAGGGTTTGCACGAAGATGCCCCGGTGGTGTGTGCATGGCCG
CGAGCTCGGAGCTGGATCAAAGTGCAGAGTATGTCAAGGCGGAGCTGGCG
AGGGTGCAGGAAGAGTACGAAGCCAAGCGCAAGGCGAAGGTATGTCAAGG
CGGAGCTGGCGAGGGTGCAGGAAGAGTACGAAGCCAAGCGCAAGGCGAAG
ATCCAGCAGCAGACACGAGAGGCGGCGGAGAGAGGGGATGCGGCCGTGAC
TCCCCTGGCCGAGCTGGAGTTTATCCCTTTCTTGGACAAGGACGGGAAAG
TTTCGACGGTTGATACCACTGGCGTGAAGGCCAGCGTGTTCGCCGTCTTC
GACGAGATCCAGCAGCAGACACGAGAGGCGGCGGAGAGAGGGGATGCGGC
CGTGACTCCCCTGGCCGAGCTGGAGTTTATCCCTTTCTTGGACAAGGACG
GGAAAGTTTCGACGGTTGATACCACTGGCGTGAAGGCCAGCGTGTTCGCC
GTCTTCGACGAGTCCAAGACCCTGAGATTTATCGGCGTGTCCCGCGGAAT
CCAGCAGACCCTCCGCTTGACCCTGGCGCGCCGCCCAACCGAAACCTATT
ACTTCAAGTCCAAGACCCTGAGATTTATCGGCGTGTCCCGCGGAATCCAG
CAGACCCTCCGCTTGACCCTGGCGCGCCGCCCAACCGAAACCTATTACTT
CAAGATACAAAACATCACACGACCGAGCCGGTCTCTGCTGGAAATCATCA
AGGAGTCCTGGATCGAGGAAAACGGCTCCACGCCCAGCGGCAACGTTGAT
CAAGAGAGCCAGATACAAAACATCACACGACCGAGCCGGTCTCTGCTGGA
AATCATCAAGGAGTCCTGGATCGAGGAAAACGGCTCCACGCCCAGCGGCA
ACGTTGATCAAGAGAGCCAGGCGAAGTGGGAGAGTTCCATCAACACGCTC
CCCATGTTCACCGAGGAGGACAAGGCTTACGTGGCTTCGATGAGGGAGAA
GGGGAGAGAAGACATGGGCACCAAGACGGTCGCGCGGCGATTCGAGGATG
AGATCATTGAGGCGAAGTGGGAGAGTTCCATCAACACGCTCCCCATGTTC
ACCGAGGAGGACAAGGCTTACGTGGCTTCGATGAGGGAGAAGGGGAGAGA
AGACATGGGCACCAAGACGGTCGCGCGGCGATTCGAGGATGAGATCATTG
AGATCCTCGAGAAGCGGGGCGCGACAGAAACATTCCGGTTTGACCCCAAG
CTGAAGGCCAAGGGACTCCTGGACTTGAAAATGGCAAGCCAAAAGCCAAA
CACCGCGGTGCCCAAGTAGATCCTCGAGAAGCGGGGCGCGACAGAAACAT
TCCGGTTTGACCCCAAGCTGAAGGCCAAGGGACTCCTGGACTTGAAAATG
GCAAGCCAAAAGCCAAACACCGCGGTGCCCAAGTAG
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