mRNA_P-fluviatile_contig8.14701.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14701.1
Unique NamemRNA_P-fluviatile_contig8.14701.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A6H5K232_9PHAE (eIF2B_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K232_9PHAE)

HSP 1 Score: 358 bits (920), Expect = 2.130e-117
Identity = 200/232 (86.21%), Postives = 203/232 (87.50%), Query Frame = 1 
Query:    1 MADFDALPEVPTGAEGDGAPGTAAPTAEAEVDLSMFDLSKXXXXXXXXXXXXXXXEEGGVEGEDLEEGEGRYNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALRNAVK 696
            MAD DALPEVP GAE +  P   +   EAEVDLSMFDLSK XXXXXXXXXXXXXX               RYNYETLLERIQNLLHVNNPEL+ERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTR DR ALRNAVK
Sbjct:   27 MADVDALPEVPPGAEDNAVPKADSAAVEAEVDLSMFDLSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRYNYETLLERIQNLLHVNNPELAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALRNAVK 258
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BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A836CND3_9STRA (Eukaryotic initiation factor 2 beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CND3_9STRA)

HSP 1 Score: 312 bits (799), Expect = 1.170e-99
Identity = 173/206 (83.98%), Postives = 182/206 (88.35%), Query Frame = 1 
Query:   82 EAEVDLS-MFDLSKXXXXXXXXXXXXXXXEEGGVEGEDLEEGEGRYNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALRNAVK 696
            +A VD++ MFDLS    XXXXXXXXXXX  E   EG    EG   Y YETLLERIQ LLHVNNPELSERSRITLKPPQLMRMGTRKT+WANFQ+IC+LMKR PEHVFSFVVAELGTEGS+DGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRL FVHCQDCGSSRSVAP+RSGFHAQTR DR A+RNAVK
Sbjct:   26 DAAVDMNAMFDLSVKKKXXXXXXXXXXXDGEP-AEGGKAAEGICSYPYETLLERIQTLLHVNNPELSERSRITLKPPQLMRMGTRKTVWANFQEICKLMKRSPEHVFSFVVAELGTEGSVDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLHFVHCQDCGSSRSVAPVRSGFHAQTRADRRAIRNAVK 230
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BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A7S2D5T9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D5T9_9STRA)

HSP 1 Score: 271 bits (693), Expect = 5.750e-84
Identity = 130/166 (78.31%), Postives = 146/166 (87.95%), Query Frame = 1 
Query:  199 EGEGR----YNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            E +GR    Y YE LL+R+ +++H  NP+L E+ R TLKPPQLMR+GT+KTLWANFQDIC+ M+R PEHVFSF +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRD VSRLFF+HCQDCGSSRSVAPIR GFHAQTR DR A+R
Sbjct:   55 EADGRVYANYAYEELLQRVVDIIHNKNPDLIEKRRTTLKPPQLMRIGTKKTLWANFQDICKSMRRNPEHVFSFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDSVSRLFFMHCQDCGSSRSVAPIRQGFHAQTRADRRAMR 220
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BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A7S2SBF4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF4_9STRA)

HSP 1 Score: 265 bits (678), Expect = 1.280e-81
Identity = 124/167 (74.25%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:  184 GEDLEEGEGRYNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            GE  E     Y+Y+ LL+R+ +++H  NPEL+E+ R T+KPP LMR+GT+KTLWANFQDIC+ M+R PEHVF F +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNT+LTRD VSRL+F++CQDCGSSRSVAPIR+GFHAQTR DR A+R
Sbjct:   62 GEGGEHKYASYSYDQLLQRVVDIIHNKNPELTEKKRTTIKPPMLMRIGTKKTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 228
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BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: F0XZH3_AURAN (eIF2B_5 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZH3_AURAN)

HSP 1 Score: 259 bits (663), Expect = 1.720e-80
Identity = 120/153 (78.43%), Postives = 138/153 (90.20%), Query Frame = 1 
Query:  214 YNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDR 672
            Y+Y+ LL+R+  +L  NNPELSE+ R T+KPPQLMR+GT+KTLW NFQ+IC++M R PEHVF F +AELGTEGSIDG QRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSP+T+LTRD VSRLFF+HCQDCGSSRSVAPIR+GFHAQTR DR
Sbjct:    1 YSYKELLDRVVGILQANNPELSEKRRHTMKPPQLMRVGTKKTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADR 153
[Close]
BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A7S2SBF3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SBF3_9STRA)

HSP 1 Score: 265 bits (678), Expect = 3.130e-78
Identity = 124/167 (74.25%), Postives = 146/167 (87.43%), Query Frame = 1 
Query:  184 GEDLEEGEGRYNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            GE  E     Y+Y+ LL+R+ +++H  NPEL+E+ R T+KPP LMR+GT+KTLWANFQDIC+ M+R PEHVF F +AELGTEGSIDGNQRLV+RGKYVPKYIESLLRKYIVEYVTCQMCRSPNT+LTRD VSRL+F++CQDCGSSRSVAPIR+GFHAQTR DR A+R
Sbjct:  318 GEGGEHKYASYSYDQLLQRVVDIIHNKNPELTEKKRTTIKPPMLMRIGTKKTLWANFQDICKSMRRNPEHVFQFFMAELGTEGSIDGNQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTSLTRDSVSRLYFINCQDCGSSRSVAPIRAGFHAQTRADRRAMR 484
[Close]
BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: K3WSE8_GLOUD (eIF2B_5 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSE8_GLOUD)

HSP 1 Score: 256 bits (655), Expect = 5.640e-78
Identity = 147/222 (66.22%), Postives = 167/222 (75.23%), Query Frame = 1 
Query:   55 APGTAAPTAEAEVDLSMFDLSKXXXXXXXXXXXXXXXEEGGVEG-----------EDLEEGEGRYNY-ETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            A G  AP    E   +MFDLSK  XXXXXXXXXXXX  + GVE              L +    Y+Y + LL RI + LH NNPEL++R R T+KPPQLMR+GT+KTLW NFQ+ICQ+M R PEHV  F ++ELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSV+ IRSGFHA TR DR A R
Sbjct:   23 ADGEVAPPPAPEDVAAMFDLSKKKXXXXXXXXXXXXEADEGVEAGVAATEVSGSSSVLVQDPATYSYKDDLLARIMSKLHENNPELTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRNPEHVLQFTLSELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVSAIRSGFHAATRADRRAAR 244
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BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: M4B8Q4_HYAAE (eIF2B_5 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8Q4_HYAAE)

HSP 1 Score: 253 bits (646), Expect = 9.570e-78
Identity = 122/158 (77.22%), Postives = 136/158 (86.08%), Query Frame = 1 
Query:  214 YNY-ETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            Y+Y + LL RI   LH NNPEL++R R T+KPPQLMR+GT+KTLW NFQ+ICQ+M R PEHV  F +AELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TR DR A R
Sbjct:   11 YSYKDELLARIIAKLHENNPELTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 168
[Close]
BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A6V1N6Q0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N6Q0_HETAK)

HSP 1 Score: 255 bits (652), Expect = 1.250e-77
Identity = 121/157 (77.07%), Postives = 137/157 (87.26%), Query Frame = 1 
Query:  214 YNYETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            Y Y+ LLERI ++LH  NPELSE+ R T+KPPQ+MR+GTRKT+W NFQ+IC+ MKR PEHVF FVV+ELGTEGSIDG Q+LVLRG+  PKYIESLLRKYIVEYVTCQMCR+ NTTLTRD VSRLFFVHCQDCGSSR VA IR+GFHAQTR +R ALR
Sbjct:   81 YTYDELLERINDILHDKNPELSEKRRQTIKPPQMMRIGTRKTVWTNFQEICKSMKRNPEHVFQFVVSELGTEGSIDGKQQLVLRGRLYPKYIESLLRKYIVEYVTCQMCRAANTTLTRDQVSRLFFVHCQDCGSSRCVAQIRAGFHAQTRAERRALR 237
[Close]
BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Match: A0A662XXW3_9STRA (eIF2B_5 domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXW3_9STRA)

HSP 1 Score: 254 bits (649), Expect = 3.250e-77
Identity = 121/158 (76.58%), Postives = 137/158 (86.71%), Query Frame = 1 
Query:  214 YNY-ETLLERIQNLLHVNNPELSERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRKDRIALR 684
            Y+Y + LL RI + LH NNPEL++R R T+KPPQLMR+GT+KTLW NFQ+ICQ+M R PEHV  F ++ELGTEGSIDGNQRLV+RG+YVPKYIESLLRKYI EYV+CQMCRSPNTTLTRD VSRL+FVHCQDCGSSRSVA IRSGFHA TR DR A R
Sbjct:   78 YSYKDELLARIMSKLHENNPELTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLSELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRAAR 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14701.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K232_9PHAE2.130e-11786.21eIF2B_5 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A836CND3_9STRA1.170e-9983.98Eukaryotic initiation factor 2 beta subunit n=1 Ta... [more]
A0A7S2D5T9_9STRA5.750e-8478.31Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SBF4_9STRA1.280e-8174.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
F0XZH3_AURAN1.720e-8078.43eIF2B_5 domain-containing protein (Fragment) n=1 T... [more]
A0A7S2SBF3_9STRA3.130e-7874.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K3WSE8_GLOUD5.640e-7866.22eIF2B_5 domain-containing protein n=1 Tax=Globispo... [more]
M4B8Q4_HYAAE9.570e-7877.22eIF2B_5 domain-containing protein n=1 Tax=Hyaloper... [more]
A0A6V1N6Q0_HETAK1.250e-7777.07Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A662XXW3_9STRA3.250e-7776.58eIF2B_5 domain-containing protein n=1 Tax=Nothophy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3935652..3943513 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score360.5
Seed ortholog evalue5.8e-97
Seed eggNOG ortholog2880.D7G233
Preferred nameSUI3
KEGG koko:K03238
KEGG Pathwayko03013,map03013
GOsGO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005850,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016282,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031369,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043614,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070993,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG1601@1,KOG2768@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03012
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioneukaryotic initiation factor 2 beta subunit
Ec32 orthologEc-11_003650.1
Exons6
Model size1851
Cds size699
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817267.2256262-CDS-P-fluviatile_contig8:3935651..39356781622817267.2256262-CDS-P-fluviatile_contig8:3935651..3935678Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3935652..3935678 +
1693571847.5812805-CDS-P-fluviatile_contig8:3935651..39356781693571847.5812805-CDS-P-fluviatile_contig8:3935651..3935678Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3935652..3935678 +
1622817267.2364547-CDS-P-fluviatile_contig8:3936041..39362601622817267.2364547-CDS-P-fluviatile_contig8:3936041..3936260Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3936042..3936260 +
1693571847.5955515-CDS-P-fluviatile_contig8:3936041..39362601693571847.5955515-CDS-P-fluviatile_contig8:3936041..3936260Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3936042..3936260 +
1622817267.2492657-CDS-P-fluviatile_contig8:3936875..39369651622817267.2492657-CDS-P-fluviatile_contig8:3936875..3936965Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3936876..3936965 +
1693571847.7822452-CDS-P-fluviatile_contig8:3936875..39369651693571847.7822452-CDS-P-fluviatile_contig8:3936875..3936965Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3936876..3936965 +
1622817267.2625897-CDS-P-fluviatile_contig8:3940415..39405451622817267.2625897-CDS-P-fluviatile_contig8:3940415..3940545Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3940416..3940545 +
1693571847.7982774-CDS-P-fluviatile_contig8:3940415..39405451693571847.7982774-CDS-P-fluviatile_contig8:3940415..3940545Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3940416..3940545 +
1622817267.2723517-CDS-P-fluviatile_contig8:3941276..39414131622817267.2723517-CDS-P-fluviatile_contig8:3941276..3941413Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3941277..3941413 +
1693571847.808711-CDS-P-fluviatile_contig8:3941276..39414131693571847.808711-CDS-P-fluviatile_contig8:3941276..3941413Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3941277..3941413 +
1622817267.2828712-CDS-P-fluviatile_contig8:3942265..39423611622817267.2828712-CDS-P-fluviatile_contig8:3942265..3942361Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3942266..3942361 +
1693571847.8172615-CDS-P-fluviatile_contig8:3942265..39423611693571847.8172615-CDS-P-fluviatile_contig8:3942265..3942361Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3942266..3942361 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817267.2951105-UTR-P-fluviatile_contig8:3942361..39435131622817267.2951105-UTR-P-fluviatile_contig8:3942361..3943513Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3942362..3943513 +
1693571847.8252537-UTR-P-fluviatile_contig8:3942361..39435131693571847.8252537-UTR-P-fluviatile_contig8:3942361..3943513Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3942362..3943513 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14701.1prot_P-fluviatile_contig8.14701.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3935652..3942361 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14701.1

>prot_P-fluviatile_contig8.14701.1 ID=prot_P-fluviatile_contig8.14701.1|Name=mRNA_P-fluviatile_contig8.14701.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=233bp
MADFDALPEVPTGAEGDGAPGTAAPTAEAEVDLSMFDLSKKKKKKKKKTK
TEAEDEEGGVEGEDLEEGEGRYNYETLLERIQNLLHVNNPELSERSRITL
KPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQ
RLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHC
QDCGSSRSVAPIRSGFHAQTRKDRIALRNAVK*
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mRNA from alignment at P-fluviatile_contig8:3935652..3943513+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14701.1 ID=mRNA_P-fluviatile_contig8.14701.1|Name=mRNA_P-fluviatile_contig8.14701.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7862bp|location=Sequence derived from alignment at P-fluviatile_contig8:3935652..3943513+ (Porterinema fluviatile SAG_2381)
ATGGCAGACTTCGATGCATTACCCGAGGTGAGAATTCATGAAAAGGAGTT
GCACTCGCTTTGCTCAACCCGCTTGTTATCGTGGAGGACCGAGCCTGTTT
TCCAATCGGAAACCCAATGGACCAGCGAGCACCGTCCGTGTGTGTCGAGC
GAGAGCGGAGAGAGCGTGGTGTGTGTGGCGATCGTGAGGTTACCGTTGCA
AAGACACTGCTGATATCACGCAGGACGGATCTTTTAGGCATATGTGAAGG
CGGTCCTGTCGGTGTACATCGTCTGTCTCAGGCCTCTTGGTGGCCGGCGG
CAGGGTCAGCGCTCACTTGTGTAAAACACAGACTATTAATAGAACCACGT
CCGAATGTGCCCATGATTGCACGCGCTCTCTCTACAACAGGTCCCTACGG
GGGCCGAGGGGGATGGGGCACCGGGCACTGCTGCTCCTACTGCGGAGGCC
GAGGTCGACTTGTCGATGTTCGATCTGAGCAAGAAGAAGAAGAAAAAGAA
GAAGAAGACCAAAACCGAGGCAGAGGACGAGGAGGGCGGGGTAGAGGGCG
AGGACCTGGAGGAAGGGGAGGGGCGGTACAATTACGAGACGCTATTGGAG
CGGATCCAGGTATGCATCATGTCGTATGGCCCAGCGGTGGAGATTTTGCG
TCTCTCATCGACGGCAATAACGTCAGTTTTTTCCGGCTTGTTGCAGGCCG
CAAAGCGCTGCTGATCGGGTCGCGTCCCCCTCCCCCCGGAAAGTATATGG
AACCCTCCCCCCCCGGTTTTTCAGCAACGAAACTCGCGCACGTGCAAAAA
GAGCATAAGGTCATTGCGTAGCACAGGCTATTGAGGGCATGTGTGCATGC
GCAATCCCAATCATCGGAGGCGCGGAGCCCTTGCCTCCTCCGCTTGCCTT
GCTCGTTCATGTGTGTCAGCTGAGGTAGTTCGTCGCGTTCAATCGTCTCA
ATCAGCGGCGGATAATGTTCCCCTCCTTCCCTCCTCACCACGAGCACTGA
CAGGACCGGCGCCCGAGGTTCGCTTTCTCCACGCACCCAGCACATGTGCA
ACATCATTGCCGTACCACACAACAAGCTGATTTCCATTTTCGTGGTAGTC
TTTTCGCACAGAACCTGCTTCATCACACGAAAGGCTGATTTCCATGTTCG
TGGTTGCATTTCTCTCACAACCTACTCCACCAGGCGAAGGCTGATTTCTT
ATTTTGTGTTTGCTTTTCCAACAGAACCTGCTCCACGTCAATAATCCGGA
GCTTTCGGAACGCAGCCGCATCACGCTCAAGCCACCACAGCTCATGCGCA
TGGGAACACGGAAGGTGCGATGGCGGAGAGCATTCGCTGCGAGCGTCGCG
CGCTTGTTCGGCGTTCCGAACGTGTTAACAAGGGCGCAGACATCGTCTCG
GGCAAATGAGGCATCAAGTTGAACAATCTCAGCCGCTTGTGCTCGTCACA
CCATCGCAATGAAGGGTGCAAGATGACGCACACTTCGGTAGGATACCGTC
GCCCTCACGTTCGGCCGCTAATTTTCCACGGCGCCCCCGCCTTTTACACA
GTGGTTGTGGGAGGAGCTGTGTGATCGAGAACAAAACCGCAAACTAGCTG
GTTGCATGAGTCGTGAAGACCGACACACGGCCGTGGCGAAGCAGTCCAGA
TAAATTCGCTGAAACCACCGATACGTGTAACGTTGTGATTGGGCCGCGGG
TAACAACATACTGTTGACGGGCGCGTCCTTGCCCGTCCTGTGTGCAACCA
GTGCTTCCGCATGTTCGTGGTTTATCTGCTAGTTTTGTCACCCTATTCAA
AGTTCAGGGTTACCTATTTACTTTGCAGGCTAAACTAACGGAAGAGGCCA
TCATTTTGTGATGCCTTTGCCTCCTTCCTGATGTCTTGGGAGCGGTTGCT
TGTTTATGTTGCCGACTCCGGTGTACCGGCGCTCACCAAGCTCTCACATG
TTGACCACCATGTTTACCACGCACATCCTTCGAGTTGGGCCATCTCTGAC
TAATCAATGTAGGTCGAGACGATCGTGCGTGGAGCATGCGCACCTCACAA
AATTGCGGACCATGTGCGAGAGGAAAGCAAACGACCTGATGTTGAAAAGG
ATGTTCGGTAGTTATGGTTGCGTCGGCCACGTGTTGCTCAGGGGTAGGCA
CTATGCCTACGGGGTTTTCACTTCAAATCTGGGTTTCGCTGTCTCGACGA
GCTTCCTGTGCTCAGTCTTGAGCCCCTGCTGTGTCTGTTATGAACATTTT
ACGTTTTGTCACTACCACTGATCAGTGAGCAATCGCTCTTGTCGACATCA
ACATATTTTGAGGCACAACAAGCAGGACTCGGCAGGCAAAGCTCCAGCTT
TGAGTTCGGGGGGCCTTTTATCTACGTTCCGTTAATTTCATGTCGGTTCC
TAGCTTTTCCGCCAGGGAGGCATATTCACCACTTCTGTTCTTGCGCCAGG
TCAATATCGAATATGTCCGAGATCAATCTGAATGATGACAAGTCGTGCCA
GTCAGCATTTCTTTTTCCGAGGGCCTCTCTCGTCATCTTCGCATTGAAAT
GACGCGTTGACTCGTTTCATGAACCAAGGATGAGGCTGCTAGACTTGCGT
GCTCGTCGTGTTGGTGTCACGCGTCAGTATCCGCTGGGATCTGCTGCCGA
GGAAGCAGTTCACCAAAGCCATCTCGTATGGAATGTAATCGATCCGGTTT
CGCCGCGTTGCCGTTGTGGGTCCTCTGCTCCTGACACCATGACTGTTTTA
CGGGATTGCTTTGCGAAGGGTTGTTCTCAGCTGGTCTTCCGTTGATTCCC
CCCCCCGCCCCTTGCTACTCTTGACGTGTGGGGAATCAACTCAAGACTAG
CCCAAAACAAGCCTTCGCAGTGGCCATCCCGTACTTGTGGTAGTGGTGTC
AGGAGCTTCGAACACACGGGGGGGGTTCCTCGAAAGCCGACAGCTATACT
GTACTCCCCTACGGTGTATGGCGCATCACTTTCCCGCGAGTGGAGCCCAG
GCCCTCTTGGCGCACAGCAGTAACGCAACGCACAGGCGATCGGTCTTTCT
TTGGACCAGCCGCATGGGTGAATCACGGCGGTGCGACGTTGACTTTCGGC
GAATAGACTGAGCACAATGAACATAATTTCGTGTCGTTTGAGTGCTTCGC
TCAAAATCGAGTGCCCGCACAAAAATACGACTTGCTTTGGCACACCTGTT
GGTTTCGCTTTTCACCAGCGCGAAGAGTTGGCTAGCTGAACGTGTCACAG
ATAGCGTGACTACCAAGGGACGTCTACACCGGCCATCAGGCGGTTTCGCG
AATGTTGCCTGCAAAAGAGGATTGCAGCCACTTGGCAATCGGCACCTCTT
TGTGTTCAAGCTTTATGAATAGGTGGTGCTGTACGACCTTGTCCACTATG
ATGTGCAGCTTTTTTTCTTCAGGAATGAACGGATATAAACAAGAGACATC
GCTCAAGGGTCGAAAGCGAAGCATCCGAAGCGTTTGAACGTGCCATTCCG
CTGTCGCTATTACCATTTGTTGTGTAACAAACTCACCGCGTAAACATAGA
GATTATGATCTTCGCAGCGCGTTTTTGAGGACAGAACTTTGTCTGACTTT
GGTTTTGTGCACGAAAACATATAGCCAAAAGCCAACGATATTGCGAGGTT
TGTTCTGGGGGTTCTGGGGTATCGAATCAAGGCATACCCTCGCTGCCGTT
GGTTTTTGGCCGTTTCCAGCTCTAACATATATGTTCTTGAACTTTTGGCT
TCGTGCATCTCTCGATCCACTCTTTTTGACACAAGTGAAGGTGCGTGTCT
CGCCCCAGATAAAATCGAAATTGTGGCAGTACCTGAATGGTCAACAACTA
CTCGTGTTGACAAATGTTTCACCACACACCCACTGGCTGAGACACTGGGC
CGTCGCGCGCGTGCCTTCACGGCTGTGACTGTATCATCGGTTCAACGGAA
GCGGCTGATCACCCTCTTGACGAAAATGCAACAGTCAAGTGGGGAATGCA
AGCCGTAAACATGAAAAATTCCCATGATTCTCCGTCGATTGGCCAGCCAA
CTCTGACCCTTGGCCTGTTTTGAAGTGATGTCTTATGTGCACGTGTGCAA
TATTGTCGTTGCGTAAACCATTGATGTGATCCTCTGTGAGCATTCAACAG
GTATTTGTGCAAGTGTGTCTAGGCGGCAAGGTTCGGTCCATTTTGCCGTT
ATGCTCACAATCGAATTCGGCTTCGCAGTATGATGTGGCGTTTTCCAGTC
AGATCGTTTGCACAATATCAGTATCGTGCCCAGCGCAAAAGTTCGGCGGC
GTTCGATCTATCCTCAACTAGCTGGTCTTGTGTTCCGTAGCTATTTCCCC
CACATACTTCTACCCCCGATGGCGTGTAGCCAGGATCGAGGGTTAAGACG
TCGACGAATTGGGGTGGTTGTGGCTTGCCACACCCTTGCTGACTGGCTGA
CTTAAAAGGAAGTTCTTCTGTCAGTGAGGATTGCTACCGTCTGTTGATTC
ATGCGAACTCAGCAGTCGCGGGAGCAGGCTGAGGCAACCTGTTCGACCCC
TCGCGTTGGTACACTTCACAGGATCGCACCCTCTGAGGAGTCGAACAATC
TGCACCAGCGGTGCAACCAACGATCTGTCTGACGACCGGATTTCGCGTTA
TGCAAATTTCTTTCTTCAACATCCACACTGTTGCATGGAGACTTGATTTG
CCGTAGCCAAATTATCCGCCTCCTCCCGGTCCGCCGCTGCTACTCTCTTG
TCCCTTGTCCGCAGACCTTGTGGGCAAACTTCCAGGACATTTGTCAGCTG
ATGAAGAGGCAGCCGGAGCACGTGTTCTCCTTTGTCGTGGCGGAGCTGGG
AACGGAAGGTTCCATCGACGGGAACCAGCGCTTGGTGTTGCGAGGTCAGT
CGGTCCGTCCAATCCATTGTCCGTTAATGTCGTGTTTGTTCGCCGAACAG
GGTGCAGCCACCCCGTGAGCATCATTTTGAGTGTCCTTAGGGCGGGGAAG
TACCTCTCGATCCGGAGCAAGAGGAATCGTCATGACCCCTGATCTAGAAA
ACAATGGTCCTCTCAACGGGGAGTGCCCTCGTTTTGGTGTCCTGAAGCGG
GGATGACTGGACTAAACCGCTGCGAGGGCAATCAGAATCCATGTGTTGTT
CGCCTTTTATTCAGTTGAGGGAAGGTTACGTGCCGTTTCCTCTTCCAGAT
GCCTCGCACGTCGAGGCCTGTGAAGTCCTTGGCATCATTCTCGTCGTTGC
CTGTGGTGTCTACCGTTGTCTCCCCCTCCCTACATAGGTGGATTTCTCCC
AAATGCAATTGTTTCGGGAACCGGTGTGGGTAAAATAGAACTCTGCCGTT
GCGTTAGGAGCACACACCACATGAAGGCAGCACTACTTTGTTCCGCCGGC
GGCCTGTCGAAAGTTTGGCGAAGTTGCTGTCGATCATGCGCACCGCCATT
TCTGATCCCTCAGGACGTCGAGGCCCGTCATTGCGGCCGCTGTCTTTTCA
TGTTGAAATCGGCACCATCCCGGCCCGCAGAGGTAAAGCCCCGTTTTCTG
CCCCGAACGCTAATTCGAACACTCGCACCTGGAGTCTCGACTGACACCGA
ATACTTTTGATGCCATAACCAACAGGCAAGTACGTGCCCAAGTACATCGA
GTCGCTCCTGCGGAAATACATCGTGGAGTATGTGACGTGCCAGATGTGCC
GCAGCCCCAACACAACCCTCACCAGGGACCCTGTGTCGCGTCTCTTCTTC
GTGCACTGCCAGGTAATGCTCGGCAAGGGTTCCCCCTTTCACGGCCCGTT
CAGGGTTGTGCTTGGCGCTCGGGGTTTGCGCGCATTAGCGTGTGACCTCG
ACTCGTCCGATCCGCTGCACTTGTGGGAATGCACTTTCCCTCTACCAACC
ATCTCACACCGCCCTAGCGATACCAAACCGTTGTTCCATCGAACCCGTTT
GCTTGGTTTTAGCATGTATGGGTTGCTGACGACGTGTTTCGTCAGCGCCA
ACGCTGCTGCTAGTGTTTGGCCACTCCGCCAGCGAACCGACGTGCTCTTT
ATCCTCAACAAAGCGATGATTGATACGAGACTCGAACTCCCGGCACATCT
TTCGTCCGTCATGGTCGTGTCCACCAGTCCAGTGGATATGACCATCTGAC
GGACAAGACGTCTGAATTTACCCATGGCTCGCACAGCACCATTCGTGGTC
ATGGCGTCCAAAATCGGCTCTAGCGACAGCGCCTTCTTTTTCGACGTGTT
ATGTGTTTTGGCTTGCGTAGTCTCCAGATGTACATTCATGCGTCCCACCA
CACACGGAAAGCTGATATTGAACATCAGCCGACTCGTTCCTCGGTGTCGC
GCCTTTCCACTACCTCTCATTATTTGGTATCCCGGTGCAATACCATGCAC
CATTTCTAGGATTCAGAGGCAGTTCACAAGAAATGGCCTGCCCGCCACAC
CCGATTCCCATGCTGATGGGCTTCGGCCGGCTGACTGCTTGTTTTGAATC
TTCTTGTGTGGTCGTGACTTCCAGCCGCATTTCACATGTGGTTGCCATTT
TGACGGACTTTGGCCGGCCGACCGCTCGTTTCGTCATATCACTGTCTTGT
CCTGTCTTGAACAGGACTGTGGCTCAAGCCGCTCCGTTGCGCCTATCCGC
TCCGGATTCCACGCGCAGACGAGGAAGGACAGGATTGCGCTGCGGAATGC
CGTCAAGTAGGGCGTGGGGGTGTATTCGTTTTTTAAGGGCACGGGGGAGG
GGGAAGGGGCATGGTAAAATAATTCGTGCGTAACACATCGGGAGTGCACG
CACACGGGTGCACCTGCCTCTTCTTATCCCCGTGTCGTGGAGGGGGACAC
TGGGCCACCGTAGTGCTCGGGCGAGGTGGTCAAGTCGCGGCTTTAAGAAC
GGGATTTCAAGGGGGCTCTTTCTAGTGTTGTGGGCACAGGAAAGCATCCC
CAAGAAGCACGGATACGGCACTTCGTGGAGGCGTCGTGCGTCGAGTATTT
GCAGCTCAGCGCTTGGTTTGATCGTCGTGATTTTCGCGGCGATTGTCGAG
AAGCGCAGGAATGATGGTCCGTTGCTGGCAGCGTTTAGTATGCGTCGGTT
ATCGTGTGTTGGGGAAACGATAAGCTGCACTATCCAGCTCAGGCACTTTA
AAGCACTAAACGCCCGATTTCCCCACTACTTGTAGTGAGGCACCTGCTCT
GCTCGGCAGGCACGTATTTCATTCGGCAGCACAACTTCAACCGACCTCGC
GGTTTTGTTGACTTTCAGAGCATATTGGGTCTACTCCTGTTTTTTCCACC
AGAGGATGGAACCAACAGAACATGTTTTGCAACTAACACGGGTAGTCCGG
GGGCGAGGTGGTCGCTTGTTTCACAGGAGGAAAGGACCAGCACGTGCAAC
GGTCAGCTCGGTTAGCGCAAAATAGTTTCTACGCGCGTACCCCTGCGTCT
GATGTTGATAGACGCTGGCGCAAGCGTCGGATTTCCTCAGATAAACAAGG
GGCTCACCGATAGCTTTAAACCTTGAGGAAGGAGCCGTTTCACAAGTGCA
TGGGATTTACGGGGTTAAACAGGGCCTGGGTCATGCAGACGAAGCCTGGC
ACCTTGTGTCGGGGAACGCTTTCAAATGCCAGCCACAACGCGTTGCCACG
GGGCATGTGCCCTTCGGTCATCTCAATCGGGCGGAAGTAAGCCACATGTC
GACGAGCACAGTTGGGTCGGAGGAAAGCAGACGGGTACCCACCGAGCTGC
CTATTGCAAGATTACGTCTTCATTTTCCTGAAGAAATCTCGTGTTGACTC
ACGACCTGTAGCAATCATGCTGCTGACTGGTGTATCCCGCCGCCGAACGC
AGAGAACTCGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3935652..3943513+

>mRNA_P-fluviatile_contig8.14701.1 ID=mRNA_P-fluviatile_contig8.14701.1|Name=mRNA_P-fluviatile_contig8.14701.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1398bp|location=Sequence derived from alignment at P-fluviatile_contig8:3935652..3943513+ (Porterinema fluviatile SAG_2381)
ATGGCAGACTTCGATGCATTACCCGAGATGGCAGACTTCGATGCATTACC
CGAGGTCCCTACGGGGGCCGAGGGGGATGGGGCACCGGGCACTGCTGCTC
CTACTGCGGAGGCCGAGGTCGACTTGTCGATGTTCGATCTGAGCAAGAAG
AAGAAGAAAAAGAAGAAGAAGACCAAAACCGAGGCAGAGGACGAGGAGGG
CGGGGTAGAGGGCGAGGACCTGGAGGAAGGGGAGGGGCGGTACAATTACG
AGACGCTATTGGAGCGGATCCAGGTCCCTACGGGGGCCGAGGGGGATGGG
GCACCGGGCACTGCTGCTCCTACTGCGGAGGCCGAGGTCGACTTGTCGAT
GTTCGATCTGAGCAAGAAGAAGAAGAAAAAGAAGAAGAAGACCAAAACCG
AGGCAGAGGACGAGGAGGGCGGGGTAGAGGGCGAGGACCTGGAGGAAGGG
GAGGGGCGGTACAATTACGAGACGCTATTGGAGCGGATCCAGAACCTGCT
CCACGTCAATAATCCGGAGCTTTCGGAACGCAGCCGCATCACGCTCAAGC
CACCACAGCTCATGCGCATGGGAACACGGAAGAACCTGCTCCACGTCAAT
AATCCGGAGCTTTCGGAACGCAGCCGCATCACGCTCAAGCCACCACAGCT
CATGCGCATGGGAACACGGAAGACCTTGTGGGCAAACTTCCAGGACATTT
GTCAGCTGATGAAGAGGCAGCCGGAGCACGTGTTCTCCTTTGTCGTGGCG
GAGCTGGGAACGGAAGGTTCCATCGACGGGAACCAGCGCTTGGTGTTGCG
AGACCTTGTGGGCAAACTTCCAGGACATTTGTCAGCTGATGAAGAGGCAG
CCGGAGCACGTGTTCTCCTTTGTCGTGGCGGAGCTGGGAACGGAAGGTTC
CATCGACGGGAACCAGCGCTTGGTGTTGCGAGGCAAGTACGTGCCCAAGT
ACATCGAGTCGCTCCTGCGGAAATACATCGTGGAGTATGTGACGTGCCAG
ATGTGCCGCAGCCCCAACACAACCCTCACCAGGGACCCTGTGTCGCGTCT
CTTCTTCGTGCACTGCCAGGCAAGTACGTGCCCAAGTACATCGAGTCGCT
CCTGCGGAAATACATCGTGGAGTATGTGACGTGCCAGATGTGCCGCAGCC
CCAACACAACCCTCACCAGGGACCCTGTGTCGCGTCTCTTCTTCGTGCAC
TGCCAGGACTGTGGCTCAAGCCGCTCCGTTGCGCCTATCCGCTCCGGATT
CCACGCGCAGACGAGGAAGGACAGGATTGCGCTGCGGAATGCCGTCAAGT
AGGACTGTGGCTCAAGCCGCTCCGTTGCGCCTATCCGCTCCGGATTCCAC
GCGCAGACGAGGAAGGACAGGATTGCGCTGCGGAATGCCGTCAAGTAG
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