mRNA_P-fluviatile_contig8.14700.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14700.1
Unique NamemRNA_P-fluviatile_contig8.14700.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: A0A6H5K108_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K108_9PHAE)

HSP 1 Score: 573 bits (1476), Expect = 2.140e-191
Identity = 325/597 (54.44%), Postives = 405/597 (67.84%), Query Frame = 3 
Query:  822 PGGRTGLLRSIHTEAEVIDREDGY---------QHSSRRESTRPSEAMLKAMELWFDETGVDRQSGN-GTPSVKLRHFPGRGIGLEAMVELDRDSIVASIPHRVCLSSAAEDAPARTLRARAHAIMSSILPSVAAACYDEGIAFETDVVAVTLQLFFEHAAGARSAFAPWMVLLTGQGHLNLPALWPVGDLDGLKGTLVLQEVKGCLSRAAKEREIVVAATKKGVRVTEETGQEMVEEGDESLEIHFLNSMGKDARPTYAEWLHARCTVQSRAYRVGPKYLLIPLVDFANHDDDVAFAVCPGDGVFTSSDEVVFAADRSYRPGQEICTSYGDMDNAKRLFSFGFVTLSQPYQHPGSS--PADLLALPTEAFCDVAFEAKSTDRLRKFKQGVLQEHATAESGASFFKQSAVFTLTQCRPSVSELVEGPARSFVEAIMPVMRFVALTLEELASDEDLKGLLLPLQDSLNDGVECDVVHDGKGAVIALKSGEGSRVLARLGSRISLENERKALRVLQEQCSSHLSAIDLNSSDVEALRAAVSNFSNEAGVFSASSPRALLCATVRVGEAIAWYSLLEACKIRTDGSATGRREEQTWAAWV 2576
            P   T LLR    ++  + RE            + + R ES R S++ LK MELW DE GVDR+ G  G P+ +L    G+GIGL A VEL+RDS VASIP ++C SS A DAPA TLRA AH + +SI  S AAAC ++ ++FE DV  VTLQ+F E AAGA S  APWM +L  +GHLNLPALWP  DL+GLKGTLVLQ+V+ CL+RA  ER  V +A   G+R     G     E     E  +L+    + RPT+AEWLHARCTVQSRAYRVG +YLLIPLVDFANHDDDVAFAVCPGDGVFT SDEVVF ADR+YRPG+E+CT+YGDMDNAKRLFSFGFVTL Q    P       ++LALPTEAFCDV     +TD LR  K+ V +E    +  +S    SAVF LT   P VS+LV+GPAR FVE+++PV+R VALT +EL   E   G     + +L    E  V          L +G+G +VLA LGSR+SL+NE++ALR+L EQC + L +++L +SDVEAL +AV++ S+E+  F+A  PR+LLCATVRVGEAIAWY+LL+AC  + +G  TG REEQTWA+W+
Sbjct:   21 PSPSTALLRYCCCQSASLAREGAIDCTNVAAAEETNGRCESPRSSKSSLKEMELWLDEIGVDRRGGGCGPPAARLTWVSGKGIGLTAAVELERDSTVASIPRKICFSSDAADAPAGTLRAWAHDLFASIPSSAAAACSEKHLSFERDVAVVTLQVFLERAAGASSTCAPWMAMLNRKGHLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVASAMVTGLRGDFGAGGREGGEAGGFPECTWLDPSNMEGRPTFAEWLHARCTVQSRAYRVGRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGDMDNAKRLFSFGFVTLKQHAAQPFQRRLTGNMLALPTEAFCDVELTIAATDALRVVKETVFRERRAGDDLSSP-SLSAVFPLT---PFVSQLVDGPARLFVESVLPVLRLVALTPDELTGGEAF-GDAFDTRSALGTIFESMVTDTSSDRCPVLAAGKGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNLTTSDVEAL-SAVADDSHESKAFAACGPRSLLCATVRVGEAIAWYALLKACDEKMEG-CTGVREEQTWASWM 610
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BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: D7G231_ECTSI (SET domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G231_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 9.560e-190
Identity = 333/612 (54.41%), Postives = 408/612 (66.67%), Query Frame = 3 
Query:  753 AVLVLVLLSSANAFT-WKFCGRRAPGGRTGLLRSIHTEAEVIDREDGYQHSSRRESTRPSEAMLKAMELWFDETGVDRQSGN-GTPSVKLRHFPGRGIGLEAMVELDRDSIVASIPHRVCLSSAAEDAPARTLRARAHAIMSSILPSVAAACYDEGIAFETDVVAVTLQLFFEHAAGARSAFAPWMVLLTGQGHLNLPALWPVGDLDGLKGTLVLQEVKGCLSRAAKEREIVVAATKKGVRVTEETGQEMVEEGDESLEIHFLNSMGKDARPTYAEWLHARCTVQSRAYRVGPKYLLIPLVDFANHDDDVAFAVCPGDGVFTSSDEVVFAADRSYRPGQEICTSYGDMDNAKRLFSFGFVTLSQPYQHPGSS-PA-DLLALPTEAFCDVAFEAKSTDRLRKFKQGVLQEHATAESGASFFKQSAVFTLTQCRPSVSELVEGPARSFVEAIMPVMRFVALTLEELASDEDLKGLLLPLQDSLNDGVECDVVHDGKGAVIALKSGEGSRVLARLGSRISLENERKALRVLQEQCSSHLSAIDLNSSDVEALRAAVSNFSNEAGVFSASSPRALLCATVRVGEAIAWYSLLEACKIRTDGSATGRREEQTWAAWV 2576
            A+++L L S A A   + +C R A   R G +    T     +  DG     R ES R S++ LK +ELW DE GVDR+ G  G P+ +L    G+GIGL A VEL+RDS VASIP R+C SS A DAPA TLRA AH + +SI  S AAAC ++ ++FE DV  VTLQ+F E AAG RS  APWM +L  +G LNLPALWP  DL+GLKGTLVLQ+V+ CL+RA  ER  V AA  KG+R     G     EG    E  +L++   + RPT+AEWLHARCTVQSRAYRV  +YLLIPLVDFANHDDDVAFAVCPGDGVFT SDEVVF ADR+YRPG+E+CT+YGDMDNAKRLFSFGFVTL Q    P    PA ++L LPTEAFCDV     +TD LR FK+ VL+E    E   S     A+F LT   P VS+LVEGPAR FVE+++PVMR VALT EEL    D  G     +       +  +          L +G G +VLA LGSR+SL+NE++ALR+L EQC + L +++    DVE LRA V++ S+E+  F+A  PR+LLCATVRVGEAIAWY+LL+AC  + +G  TG REEQTWA+W 
Sbjct:   14 ALVLLQLPSPATALVRYSWC-RSALLAREGAIGC--TNVATAEETDG-----RCESPRSSKSSLKEIELWLDEVGVDRRGGGCGPPAARLTSVSGKGIGLTASVELERDSTVASIPRRICFSSDAADAPAGTLRAWAHDLFASIPSSAAAACSEKHLSFEGDVAVVTLQVFLESAAGERSTCAPWMAMLNRKGSLNLPALWPDSDLEGLKGTLVLQDVEACLARAKSERVAVAAAMVKGLRGELGGGGRAGGEGGGFPECPWLDTSNMEGRPTFAEWLHARCTVQSRAYRVRRRYLLIPLVDFANHDDDVAFAVCPGDGVFTGSDEVVFVADRTYRPGEEVCTTYGDMDNAKRLFSFGFVTLKQHAAQPSQRRPAGNMLPLPTEAFCDVELTIAATDELRVFKEAVLRERQAGEDLVSP-NLGAMFPLT---PFVSQLVEGPARLFVESVLPVMRLVALTPEELTGG-DAFGDACDTRSVFGTSFDSRMTDTSSDKCPVLAAGTGRQVLAHLGSRLSLQNEQQALRLLAEQCRTRLGSLNPTFGDVETLRA-VADDSHESKTFAACGPRSLLCATVRVGEAIAWYALLKACAEKMEGG-TGVREEQTWASWT 610
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BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: D7G230_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G230_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 4.630e-42
Identity = 78/108 (72.22%), Postives = 91/108 (84.26%), Query Frame = 2 
Query:  272 TLLLSPQASKRFLLIQEAWETLRDDDLREEYDSRLDLQARNVVASDEVSLSEMHYDETNGGSFSYECRCGEEYVVSWAELCEGFEVLDCPGCSLYLRVIGVTAETIAA 595
            T  L  QAS+RFLLIQ AWETLRD+DLR+EYD RLDLQARN+V SDEV++ +MH+DE +GGSFS+ECRCGE YVV+  EL EGFEVLDCPGCSLY+RV+G  AE  AA
Sbjct:   39 TAELKAQASQRFLLIQAAWETLRDEDLRQEYDCRLDLQARNIVVSDEVNVDDMHFDEADGGSFSHECRCGEAYVVTRDELNEGFEVLDCPGCSLYIRVLGKLAEPAAA 146
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: W7TVF3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVF3_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.300e-13
Identity = 100/367 (27.25%), Postives = 148/367 (40.33%), Query Frame = 3 
Query:  930 EAMLKAMELWFDETGVDRQSGNGTPSVKLRH----FPGRG-IGLEAMVELDRDSIVASIPHRVCLSSAAEDAPARTLRARAHAIMSSILPSVAAACYDE------GIAFETDVVAVTLQLFFEHAAGA---------RSAFAPWMVLLTGQGHLNLPALWPVGDLDGLKGTLVLQEVKGCLSRAAKEREIVVAATKKG----VRVTEETGQEMVEEGDESLEIHFLNSMGKDARPT------YAEWLHARCTVQSRAYRV------------------GPKYLLIPLVDFANHDDDVAFAVCPGDGVFTSSDEVVFAADRSY-RPGQEICTSYGDMDNAKRLFSFGFV-TLSQPYQHPGSSPADLLA 1880
            +A L A   W +  G    S +     +L H     PG   + L     +++D I+ +IP  + L+S   + P+  LR  A       +  +A     E      G +F+         L F HA  +          S + P++ +L  +  ++LP LW     +G  G     E   C    +++  + + A        V + EE   E+     ESL    L        PT      +  W  AR    SR Y +                   P   L+PL+D ANHDD + +AV PGDGVFTS +EV   ADR Y   G    +SYG + +A + +SFGF+ TLS P     S P+ L A
Sbjct:   72 DAALDAFRHWLNVKGGIDLSASSLGLRRLAHDDENSPGNADLELFTTRPIEKDQILLAIPPSIVLTS---ELPSPALRDLAGDAALDDMGRLALRLLHEVSQAGAGSSFQP--------LLFSHATSSSSFPTLPLDNSGWLPYVRVLPSRNQMDLPFLWEEDGREG--GGEDEGEEDSCGPEDSRDSLLALLAPSPLYDDIVALREEMRGEL-----ESLRKAVLAHRTLPTSPTILSCLTWENWSWARAVAMSRPYVLKSRPSRSTEEAGRPDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTSREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSSLFA 420
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: DPH4_DICDI (DPH4 homolog n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=DPH4_DICDI)

HSP 1 Score: 78.6 bits (192), Expect = 4.360e-13
Identity = 43/92 (46.74%), Postives = 61/92 (66.30%), Query Frame = 2 
Query:  296 SKRFLLIQEAWETLRDDDLREEYDSRLDLQARNVVA-SDEVSLSEMHYDETNGGSFSYECRCGEEYVVSWAELCEGFEVLDCPGCSLYLRVI 568
            +K F  IQ AWETL+DD LR++YDS L  Q R   + SDE+ L +M + E N   + Y CRCG+ Y+++  +L EG +V+ C GCSL ++VI
Sbjct:   76 TKDFNDIQIAWETLKDDLLRKQYDSLLLEQKRQKYSVSDEIDLDDMEFIEENS-EYVYPCRCGDHYIITEDQLSEGSDVVCCSGCSLSIKVI 166
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: A0A4D9DE75_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DE75_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.780e-12
Identity = 101/371 (27.22%), Postives = 152/371 (40.97%), Query Frame = 3 
Query:  930 EAMLKAMELWFDETGVDRQSGNGTPSVKLRH----FPGRG-IGLEAMVELDRDSIVASIPHRVCLSSAAEDAPARTLRARAHAIMSSILPSVAAACYDE------GIAFETDVVAVTLQLFFEHAAGA---------RSAFAPWMVLLTGQGHLNLPALWPVGDLDGLKGTLVLQEVKGCLSRAAKE--REIVVAATKKG------VRVTEETGQEMVEEGDESLEIHFLNSMGKDARPT------YAEWLHARCTVQSRAYRV------------------GPKYLLIPLVDFANHDDDVAFAVCPGDGVFTSSDEVVFAADRSY-RPGQEICTSYGDMDNAKRLFSFGFV-TLSQPYQHPGSSPADLLA 1880
            +A L A   W +  G    S +     +L H     PG   + L     +++D I+ +IP  + L+S   + P+  LR  A       +  +A     E      G +F+         L F HA  +          S + P++ +L  +  ++LP LW   + DG +G     E +G    +  E   + ++A           V + EE   E+     ESL    L +      PT      +  W  AR    SR Y +                   P   L+PL+D ANHDD + +AV PGDGVFT+ +EV   ADR Y   G    +SYG + +A + +SFGF+ TLS P     S P+  LA
Sbjct:   72 DAALDAFRHWLNVKGGIDLSASSLGLRRLAHDEENSPGNADLELFTTRPIEKDQILLAIPPSIVLTS---ELPSPALRDLAGDAALDDMSRLALRLLHEVSQAGAGSSFQP--------LLFSHATSSSSFSTLPLDNSGWLPYVRVLPSRNQMDLPFLW---EEDGREGG---GENEGEEDSSGPEDSHDSLLALLAPSPLYDDIVALREEMRGEL-----ESLRKAVLANRTLSTSPTLLSCLTWENWSWARAIAMSRPYVLESRPSRSTEAAGRSDFFGDPVLQLLPLLDMANHDDAIHYAVQPGDGVFTAREEVQLVADRDYPEVGAPFLSSYGPLSSATKFYSFGFLDTLSLPPSARSSPPSSPLA 420
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: A0A8J4PM90_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PM90_9MYCE)

HSP 1 Score: 76.6 bits (187), Expect = 4.750e-12
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 2 
Query:  281 LSPQASKRFLLIQEAWETLRDDDLREEYDSRLDLQARNVVA-SDEVSLSEMHY--DETNGGSF-SYECRCGEEYVVSWAELCEGFEVLDCPGCSLYLRVI 568
            L  +   ++L IQ+AWE LRDDD R++YDS L  Q R   + SDEV + +M    DE +G  + SY CRCG +Y ++  +L +  ++  C GCSL +RV+
Sbjct:   70 LDDKDKNKYLEIQKAWEVLRDDDKRKQYDSELLEQGRQKYSVSDEVDIDDMELVMDEEDGCDYYSYPCRCGSKYTITEDDLLDNLDIAWCTGCSLTIRVL 169
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: H3H5A6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H5A6_PHYRM)

HSP 1 Score: 74.3 bits (181), Expect = 8.540e-12
Identity = 47/136 (34.56%), Postives = 75/136 (55.15%), Query Frame = 2 
Query:  197 DVIRGFIS*RCRRCRNEGWSTHEGPTLLLSPQASKRFLLIQEAWETLRDDDLREEYDSRL---DLQARN----VVASDEVSLSEMHYDETNGGS-----FSYECRCGEEYVVSWAELCEGFEVLDCPGCSLYLRVI 568
            D +R       RRC       H       + +  +RFL +QEA+ETLR ++ R +YD++L   +L  R     V+ SDEV L++M  +   G       F+++CRCG+ Y ++  EL +G +V+ C GCSL++RV+
Sbjct:   19 DDVRRAYHQAARRC-------HPDKRSAATEEDEQRFLRVQEAYETLRTEEQRRQYDAKLLQDELVRRREQELVMVSDEVPLADMKREILPGDDDDEVLFTHQCRCGDLYEITEDELQDGVDVVPCTGCSLHIRVL 147
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: A0A3R7KH33_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KH33_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 2.460e-11
Identity = 39/104 (37.50%), Postives = 67/104 (64.42%), Query Frame = 2 
Query:  299 KRFLLIQEAWETLRDDDLREEYDSRLDLQARN-------VVASDEVSLSEMHYD-------ETNGGSFSYECRCGEEYVVSWAELCEGFEVLDCPGCSLYLRVI 568
            ++FL +QEA+ETLR+ DLR++YD+++     N       +V SD ++L++M  +       E +   F+++CRCG+ Y +S  EL +G +V+ C GCSL++RV+
Sbjct:  119 QQFLQVQEAYETLRNADLRQQYDAKMTQDELNRKREEEVIVVSDIIALNDMQREVIGSEDGEDDEVLFTHQCRCGDLYEISEGELLDGVDVVPCTGCSLHIRVL 222
[Close]
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Match: M4BX93_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX93_HYAAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.560e-11
Identity = 43/104 (41.35%), Postives = 65/104 (62.50%), Query Frame = 2 
Query:  290 QASKRFLLIQEAWETLRDDDLREEYDSRL--DLQARN-----VVASDEVSLSEMH----YDETNGGSFSYECRCGEEYVVSWAELCEGFEVLDCPGCSLYLRVI 568
            Q  + FL +QEA+ETLR+ +LR +YD++L  D+  R      VV SDEV+LS M       E +   +++ CRCG+ Y +S  E+ +G  V+ C GCSL++RV+
Sbjct:   54 QQQQLFLCVQEAYETLRNTELRRQYDAKLQQDVLVRKREHEVVVVSDEVALSAMQRVYLQGEDDDVVYTHTCRCGDVYEISDIEIRDGVGVVPCSGCSLHIRVL 157
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14700.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K108_9PHAE2.140e-19154.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G231_ECTSI9.560e-19054.41SET domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G230_ECTSI4.630e-4272.22Heat shock protein 40 like protein/ DnaJ domain co... [more]
W7TVF3_9STRA1.300e-1327.25Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
DPH4_DICDI4.360e-1346.74DPH4 homolog n=1 Tax=Dictyostelium discoideum TaxI... [more]
A0A4D9DE75_9STRA3.780e-1227.22Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J4PM90_9MYCE4.750e-1242.00Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
H3H5A6_PHYRM8.540e-1234.56Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3R7KH33_9STRA2.460e-1137.50Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
M4BX93_HYAAE2.560e-1141.35Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3929747..3934022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score575.5
Seed ortholog evalue3.2e-161
Seed eggNOG ortholog2880.D7G231
EggNOG OGs2D17T@1,2SH13@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionSET domain and Rubisco LSMT substrate-binding domain protein
Ec32 orthologEc-11_003630.1
Exons5
Model size2805
Cds size1947
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817267.1076686-UTR-P-fluviatile_contig8:3929746..39301581622817267.1076686-UTR-P-fluviatile_contig8:3929746..3930158Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3929747..3930158 +
1693571847.5034568-UTR-P-fluviatile_contig8:3929746..39301581693571847.5034568-UTR-P-fluviatile_contig8:3929746..3930158Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3929747..3930158 +
1622817267.1229715-UTR-P-fluviatile_contig8:3930898..39311421622817267.1229715-UTR-P-fluviatile_contig8:3930898..3931142Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3930899..3931142 +
1693571847.5169933-UTR-P-fluviatile_contig8:3930898..39311421693571847.5169933-UTR-P-fluviatile_contig8:3930898..3931142Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3930899..3931142 +
1622817267.185853-UTR-P-fluviatile_contig8:3933820..39340221622817267.185853-UTR-P-fluviatile_contig8:3933820..3934022Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3933821..3934022 +
1693571847.5720081-UTR-P-fluviatile_contig8:3933820..39340221693571847.5720081-UTR-P-fluviatile_contig8:3933820..3934022Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3933821..3934022 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817267.1358647-CDS-P-fluviatile_contig8:3931142..39315651622817267.1358647-CDS-P-fluviatile_contig8:3931142..3931565Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3931143..3931565 +
1693571847.536102-CDS-P-fluviatile_contig8:3931142..39315651693571847.536102-CDS-P-fluviatile_contig8:3931142..3931565Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3931143..3931565 +
1622817267.14615-CDS-P-fluviatile_contig8:3931867..39324151622817267.14615-CDS-P-fluviatile_contig8:3931867..3932415Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3931868..3932415 +
1693571847.547305-CDS-P-fluviatile_contig8:3931867..39324151693571847.547305-CDS-P-fluviatile_contig8:3931867..3932415Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3931868..3932415 +
1622817267.1587527-CDS-P-fluviatile_contig8:3932541..39326381622817267.1587527-CDS-P-fluviatile_contig8:3932541..3932638Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3932542..3932638 +
1693571847.5561104-CDS-P-fluviatile_contig8:3932541..39326381693571847.5561104-CDS-P-fluviatile_contig8:3932541..3932638Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3932542..3932638 +
1622817267.171918-CDS-P-fluviatile_contig8:3932941..39338201622817267.171918-CDS-P-fluviatile_contig8:3932941..3933820Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3932942..3933820 +
1693571847.5643094-CDS-P-fluviatile_contig8:3932941..39338201693571847.5643094-CDS-P-fluviatile_contig8:3932941..3933820Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3932942..3933820 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14700.1prot_P-fluviatile_contig8.14700.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3931143..3933820 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14700.1

>prot_P-fluviatile_contig8.14700.1 ID=prot_P-fluviatile_contig8.14700.1|Name=mRNA_P-fluviatile_contig8.14700.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=649bp
MKKAGDTSRWASGEAKGAISFRNTLVARGKIAAVLVLVLLSSANAFTWKF
CGRRAPGGRTGLLRSIHTEAEVIDREDGYQHSSRRESTRPSEAMLKAMEL
WFDETGVDRQSGNGTPSVKLRHFPGRGIGLEAMVELDRDSIVASIPHRVC
LSSAAEDAPARTLRARAHAIMSSILPSVAAACYDEGIAFETDVVAVTLQL
FFEHAAGARSAFAPWMVLLTGQGHLNLPALWPVGDLDGLKGTLVLQEVKG
CLSRAAKEREIVVAATKKGVRVTEETGQEMVEEGDESLEIHFLNSMGKDA
RPTYAEWLHARCTVQSRAYRVGPKYLLIPLVDFANHDDDVAFAVCPGDGV
FTSSDEVVFAADRSYRPGQEICTSYGDMDNAKRLFSFGFVTLSQPYQHPG
SSPADLLALPTEAFCDVAFEAKSTDRLRKFKQGVLQEHATAESGASFFKQ
SAVFTLTQCRPSVSELVEGPARSFVEAIMPVMRFVALTLEELASDEDLKG
LLLPLQDSLNDGVECDVVHDGKGAVIALKSGEGSRVLARLGSRISLENER
KALRVLQEQCSSHLSAIDLNSSDVEALRAAVSNFSNEAGVFSASSPRALL
CATVRVGEAIAWYSLLEACKIRTDGSATGRREEQTWAAWVSSHHELIG*
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mRNA from alignment at P-fluviatile_contig8:3929747..3934022+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14700.1 ID=mRNA_P-fluviatile_contig8.14700.1|Name=mRNA_P-fluviatile_contig8.14700.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4276bp|location=Sequence derived from alignment at P-fluviatile_contig8:3929747..3934022+ (Porterinema fluviatile SAG_2381)
AGATTAAGGGTGCCTACCAGGCGGCGGCACTAGCAACGCATCCCGATAAG
CAGGCCAGTCTTGCCACCGACGCGAAGGAGCAGGTGTGAGGGTTCAACAC
CATCTCTCCCTCCCGTGCGATGCCTCTCTGTCTGGGTTTCTTGTTTGCCA
TTGATCCCCACCATCGAGATTTTTCCATCTGTACTTTCCCTGCCTGGATG
TAATTCGAGGCTTCATATCGTGACGCTGCCGTAGATGCAGGAACGAGGGA
TGGTCCACACACGAAGGTCCAACGCTCTTGCTTTCCCCACAGGCGTCAAA
GCGGTTTCTGCTGATCCAGGAGGCGTGGGAGACCCTCCGGGACGACGATC
TCCGAGAAGAATACGACAGCCGATTGGATTTACAAGCCAGGAATGTGGTC
GCGTCGGATGAGGTGCGAGGAATCCGCCATAATGCAAATCATGCAATGCA
ATTGTTGCTGTTGAAAGTCAAATTTCAATCCGGTCGTGGTGGATCTTTGT
GTCTTACCAGCCTAAGCCTCTGTCGCATTCGACCTCGGTTCTCCGTTGTG
CCCTGCAAGCCTGCCCACAGTACTTGCACACATGGAAACCCAACAATTCT
GCTTTGGAGATCTACGCTAGATACCAGAGAGCAATGGATTCCCAAATCTT
CGAGCGATGCAATTATCCATTTCTCCAATCCCCGAGGGTGCCATGTGAAG
TACAAGGTTGGTAGCACGTGACTCCGCTGCAAATTAGTTGGAGCGGAGAG
AGAGAGAGAGAGCGCGCGCCCGCGCTCAAAATCGCTTTTCTAGGAAAATA
CCCGCATCAAGAACAGCTTTTCGAGTGGAAATGTGAACAAACAGGTTTTG
TAAAGGGTATCAGCTGTCCGTCCCAGGACCGATGAGTGAGTGAGTGATGC
GGCGTAGCTACCGTCTCGCGCCATATGAAGTATTGGCGTGTGCCCTGGAG
CTCGCAGGGCAGGCATAAAAAGAAGCCATGAAAGCACCCTACTCAACCAT
GAAAACACCCCGCCGAATTGTCGCTCCTACCGAATTCAGTAGTGGGGTAT
CTCCCTGTGCGGAATAAACCGTGCTAACACCGCCCCAAATGACCTGATGT
ACTTCTCGATCTCCTGCGCTCTTTGTGCTGCGAATGTGCTTCCTCAAAAC
AGGTTAGCTTGAGCGAAATGCACTACGACGAAACAAACGGCGGCAGTTTC
TCGTATGAGTGCCGTTGCGGGGAGGAGTACGTGGTATCCTGGGCAGAACT
TTGCGAAGGTTTCGAAGTCCTTGACTGCCCGGGGTGCAGTCTTTACCTGC
GTGTGATCGGGGTGACAGCCGAAACTATAGCTGCCAGAGCACCATCAGGT
TCAGAGTCTGCGGGTACCCGGTAGCGCCAGACAACGCTTATTAGCAATGA
AGAAGGCTGGTGATACCAGCCGCTGGGCGAGCGGGGAGGCGAAAGGTGCC
ATATCCTTCCGCAACACTCTGGTTGCAAGGGGTAAGATTGCAGCAGTGCT
GGTGTTGGTGCTCTTGTCGTCCGCGAATGCGTTCACGTGGAAGTTCTGTG
GTCGACGAGCTCCGGGAGGGCGGACGGGGCTACTGCGAAGCATTCACACG
GAAGCAGAGGTGATTGATCGAGAGGACGGGTATCAACACAGCAGCAGAAG
GGAATCCACAAGACCCAGCGAAGCGATGCTCAAGGCGATGGAGTTGTGGT
TTGATGAGACCGGGGTCGACCGGCAAAGTGGGAACGGAACCCCGTCGGTT
AAACTACGTCACTTCCCTGGGAGAGGAATCGGGTTGGAAGCTATGGTGGA
GCTCGATCGTGATTCGATTGTGAGGGCGTGAAATGTTTTGAACGCCAAAT
CTGCAAACTCTGTCTCACAGATATTGCAAAAGCTCTCTTACCGGACAGCT
GTCAAGTTTGAAGGAATTCACGAAGTACCCACATCCGTTTAGCGCGTCAT
TTTGACAGTTTTGGCAAACCAGTTAGTACCCTGCGCCTTCGTTTTCTTTC
TAGGAGAAGATCGTCCTTGCGTTTTTAACGATGAATGTGCTGGACCGGTT
GCGTCTCCGCTTGCGGCCCACAGGAGTGACCCCTTGCATAATCTCCTCAT
TTCGTTTTTTTCTTTGTTTAGGTTGCGAGCATACCACACCGAGTATGCCT
ATCGTCGGCAGCCGAAGACGCGCCGGCTCGGACGCTGAGAGCGCGGGCGC
ATGCCATTATGTCGTCAATCCTGCCAAGTGTTGCCGCCGCATGCTACGAC
GAAGGAATCGCGTTCGAGACGGACGTGGTCGCCGTTACCCTCCAGCTCTT
CTTCGAGCATGCAGCGGGCGCACGCTCTGCTTTTGCGCCTTGGATGGTGC
TACTAACCGGACAGGGCCACCTGAATTTGCCGGCTCTGTGGCCGGTAGGC
GATCTTGACGGCCTCAAGGGAACGCTTGTGTTGCAGGAGGTAAAGGGGTG
TTTGTCCAGGGCCGCGAAGGAGCGCGAAATCGTGGTAGCTGCGACTAAGA
AGGGAGTCAGAGTGACGGAGGAGACGGGACAGGAAATGGTCGAAGAAGGG
GACGAATCTTTGGAAATTCATTTTTTGAACTCCATGGGAAAGGACGCAAG
ACCGACGTACGCGGAATGGCTACATGCACGGTGCACGGTACAGTCCAGGG
CATACCGTGTCGGGCCAAAGTGAGTGGGGTGATCCGCTCATGTTATGAGT
GTAACAACAGCGATACATGCACTTTTTTTATTTTCATTCTACCACAAAAA
CCACCAAGTTGACACCTATTCGTTTCCGTTGTGCCCCGTGTCCAGATACC
TACTCATCCCCCTGGTCGACTTCGCCAACCACGATGATGATGTCGCCTTT
GCCGTGTGTCCCGGCGACGGCGTTTTCACTAGCTCAGATGAGGTGAGCAA
GTCTCCTTTGCCGTGTGTCCCGGCGACGGCGTTTTGACTAGCTCAGATGA
AACGAGCAAGTATCTTCTGGCTGATGCATTTGCCGTGGTGAGCTTGATGT
TCTCTTCAACTCAATGAGTAAGTCTGCATGACACTCGACAAAAACAAAAT
ACTCGCGCAGATGCATGGAAGATTTTGGGTGAGAGGGCGTAATGGTGTGT
TATGCTTCACCCCTTTCAGCCAATGGTTGTGCTGTTTTTGACCAGCTTCA
GCGGCGCGGTGCGCTTTTGCTCCCACCATGGCTTGGCCGTTGAAGGTGGT
GTTCGCGGCAGACCGAAGTTACCGTCCAGGCCAAGAGATCTGCACCAGTT
ATGGGGACATGGACAATGCAAAGCGGCTCTTCTCGTTCGGCTTCGTCACC
CTGTCTCAGCCGTATCAACATCCGGGATCCAGCCCAGCCGACCTGCTAGC
TCTACCGACAGAGGCTTTCTGCGACGTTGCGTTTGAAGCGAAGTCAACAG
ACAGGTTGAGGAAATTCAAGCAGGGCGTTCTTCAAGAGCATGCGACAGCT
GAGAGCGGCGCGTCATTCTTCAAGCAAAGCGCGGTGTTCACTTTGACGCA
GTGTCGACCGTCGGTTTCGGAGCTAGTGGAAGGCCCTGCTCGGTCCTTCG
TCGAGGCAATCATGCCTGTGATGCGCTTCGTCGCACTCACTCTCGAAGAG
CTTGCTAGCGACGAGGATTTGAAGGGGTTGCTTCTGCCGCTGCAAGACTC
CTTGAATGACGGCGTTGAATGCGATGTGGTTCACGATGGAAAAGGCGCGG
TTATCGCACTCAAATCTGGGGAAGGGAGTCGGGTTCTAGCACGATTGGGC
AGCCGAATTTCGCTTGAGAACGAACGGAAGGCGCTACGTGTTCTCCAAGA
GCAGTGCTCCAGTCATTTGAGCGCAATCGACCTAAACTCTAGTGATGTTG
AAGCTTTGAGAGCGGCCGTCAGCAATTTTTCGAACGAAGCCGGAGTATTT
TCTGCTTCGTCACCTCGGGCCTTGCTCTGTGCAACGGTGCGGGTAGGGGA
AGCAATAGCCTGGTACTCACTTTTAGAGGCATGCAAGATCAGGACAGATG
GGTCCGCAACAGGTCGACGCGAGGAGCAGACTTGGGCGGCATGGGTGTCT
AGTCATCACGAGTTGATTGGATAGCCCATCAGCGGTCCTGAAATCAAACA
AAAGCTGGACATGGGGTGAAAGAAGACTGAAGCGGATCGAATTCCACCTG
TGCTTCTTTTCGAGGTCGTTCCCGACTTGCTCTAATTCTGCTTCTTTTCC
CCTTGAAGCGGTGCCTGACTTGTGCTATTTCCGCTTGTCAGGTTCGTGTA
CCGCGTGAGCGCCATGAAAAGGGGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3929747..3934022+

>mRNA_P-fluviatile_contig8.14700.1 ID=mRNA_P-fluviatile_contig8.14700.1|Name=mRNA_P-fluviatile_contig8.14700.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3894bp|location=Sequence derived from alignment at P-fluviatile_contig8:3929747..3934022+ (Porterinema fluviatile SAG_2381)
ATGAAGAAGGCTGGTGATACCAGCCGCTGGGCGAGCGGGGAGGCGAAAGG
TGCCATATCCTTCCGCAACACTCTGGTTGCAAGGGGTAAGATTGCAGCAG
TGCTGGTGTTGGTGCTCTTGTCGTCCGCGAATGCGTTCACGTGGAAGTTC
TGTGGTCGACGAGCTCCGGGAGGGCGGACGGGGCTACTGCGAAGCATTCA
CACGGAAGCAGAGGTGATTGATCGAGAGGACGGGTATCAACACAGCAGCA
GAAGGGAATCCACAAGACCCAGCGAAGCGATGCTCAAGGCGATGGAGTTG
TGGTTTGATGAGACCGGGGTCGACCGGCAAAGTGGGAACGGAACCCCGTC
GGTTAAACTACGTCACTTCCCTGGGAGAGGAATCGGGTTGGAAGCTATGG
TGGAGCTCGATCGTGATTCGATTATGAAGAAGGCTGGTGATACCAGCCGC
TGGGCGAGCGGGGAGGCGAAAGGTGCCATATCCTTCCGCAACACTCTGGT
TGCAAGGGGTAAGATTGCAGCAGTGCTGGTGTTGGTGCTCTTGTCGTCCG
CGAATGCGTTCACGTGGAAGTTCTGTGGTCGACGAGCTCCGGGAGGGCGG
ACGGGGCTACTGCGAAGCATTCACACGGAAGCAGAGGTGATTGATCGAGA
GGACGGGTATCAACACAGCAGCAGAAGGGAATCCACAAGACCCAGCGAAG
CGATGCTCAAGGCGATGGAGTTGTGGTTTGATGAGACCGGGGTCGACCGG
CAAAGTGGGAACGGAACCCCGTCGGTTAAACTACGTCACTTCCCTGGGAG
AGGAATCGGGTTGGAAGCTATGGTGGAGCTCGATCGTGATTCGATTGTTG
CGAGCATACCACACCGAGTATGCCTATCGTCGGCAGCCGAAGACGCGCCG
GCTCGGACGCTGAGAGCGCGGGCGCATGCCATTATGTCGTCAATCCTGCC
AAGTGTTGCCGCCGCATGCTACGACGAAGGAATCGCGTTCGAGACGGACG
TGGTCGCCGTTACCCTCCAGCTCTTCTTCGAGCATGCAGCGGGCGCACGC
TCTGCTTTTGCGCCTTGGATGGTGCTACTAACCGGACAGGGCCACCTGAA
TTTGCCGGCTCTGTGGCCGGTAGGCGATCTTGACGGCCTCAAGGGAACGC
TTGTGTTGCAGGAGGTAAAGGGGTGTTTGTCCAGGGCCGCGAAGGAGCGC
GAAATCGTGGTAGCTGCGACTAAGAAGGGAGTCAGAGTGACGGAGGAGAC
GGGACAGGAAATGGTCGAAGAAGGGGACGAATCTTTGGAAATTCATTTTT
TGAACTCCATGGGAAAGGACGCAAGACCGACGTACGCGGAATGGCTACAT
GCACGGTGCACGGTACAGTCCAGGGCATACCGTGTCGGGCCAAAGTTGCG
AGCATACCACACCGAGTATGCCTATCGTCGGCAGCCGAAGACGCGCCGGC
TCGGACGCTGAGAGCGCGGGCGCATGCCATTATGTCGTCAATCCTGCCAA
GTGTTGCCGCCGCATGCTACGACGAAGGAATCGCGTTCGAGACGGACGTG
GTCGCCGTTACCCTCCAGCTCTTCTTCGAGCATGCAGCGGGCGCACGCTC
TGCTTTTGCGCCTTGGATGGTGCTACTAACCGGACAGGGCCACCTGAATT
TGCCGGCTCTGTGGCCGGTAGGCGATCTTGACGGCCTCAAGGGAACGCTT
GTGTTGCAGGAGGTAAAGGGGTGTTTGTCCAGGGCCGCGAAGGAGCGCGA
AATCGTGGTAGCTGCGACTAAGAAGGGAGTCAGAGTGACGGAGGAGACGG
GACAGGAAATGGTCGAAGAAGGGGACGAATCTTTGGAAATTCATTTTTTG
AACTCCATGGGAAAGGACGCAAGACCGACGTACGCGGAATGGCTACATGC
ACGGTGCACGGTACAGTCCAGGGCATACCGTGTCGGGCCAAAATACCTAC
TCATCCCCCTGGTCGACTTCGCCAACCACGATGATGATGTCGCCTTTGCC
GTGTGTCCCGGCGACGGCGTTTTCACTAGCTCAGATGAGATACCTACTCA
TCCCCCTGGTCGACTTCGCCAACCACGATGATGATGTCGCCTTTGCCGTG
TGTCCCGGCGACGGCGTTTTCACTAGCTCAGATGAGGTGGTGTTCGCGGC
AGACCGAAGTTACCGTCCAGGCCAAGAGATCTGCACCAGTTATGGGGACA
TGGACAATGCAAAGCGGCTCTTCTCGTTCGGCTTCGTCACCCTGTCTCAG
CCGTATCAACATCCGGGATCCAGCCCAGCCGACCTGCTAGCTCTACCGAC
AGAGGCTTTCTGCGACGTTGCGTTTGAAGCGAAGTCAACAGACAGGTTGA
GGAAATTCAAGCAGGGCGTTCTTCAAGAGCATGCGACAGCTGAGAGCGGC
GCGTCATTCTTCAAGCAAAGCGCGGTGTTCACTTTGACGCAGTGTCGACC
GTCGGTTTCGGAGCTAGTGGAAGGCCCTGCTCGGTCCTTCGTCGAGGCAA
TCATGCCTGTGATGCGCTTCGTCGCACTCACTCTCGAAGAGCTTGCTAGC
GACGAGGATTTGAAGGGGTTGCTTCTGCCGCTGCAAGACTCCTTGAATGA
CGGCGTTGAATGCGATGTGGTTCACGATGGAAAAGGCGCGGTTATCGCAC
TCAAATCTGGGGAAGGGAGTCGGGTTCTAGCACGATTGGGCAGCCGAATT
TCGCTTGAGAACGAACGGAAGGCGCTACGTGTTCTCCAAGAGCAGTGCTC
CAGTCATTTGAGCGCAATCGACCTAAACTCTAGTGATGTTGAAGCTTTGA
GAGCGGCCGTCAGCAATTTTTCGAACGAAGCCGGAGTATTTTCTGCTTCG
TCACCTCGGGCCTTGCTCTGTGCAACGGTGCGGGTAGGGGAAGCAATAGC
CTGGTACTCACTTTTAGAGGCATGCAAGATCAGGACAGATGGGTCCGCAA
CAGGTCGACGCGAGGAGCAGACTTGGGCGGCATGGGTGTCTAGTCATCAC
GAGTTGATTGGATAGGTGGTGTTCGCGGCAGACCGAAGTTACCGTCCAGG
CCAAGAGATCTGCACCAGTTATGGGGACATGGACAATGCAAAGCGGCTCT
TCTCGTTCGGCTTCGTCACCCTGTCTCAGCCGTATCAACATCCGGGATCC
AGCCCAGCCGACCTGCTAGCTCTACCGACAGAGGCTTTCTGCGACGTTGC
GTTTGAAGCGAAGTCAACAGACAGGTTGAGGAAATTCAAGCAGGGCGTTC
TTCAAGAGCATGCGACAGCTGAGAGCGGCGCGTCATTCTTCAAGCAAAGC
GCGGTGTTCACTTTGACGCAGTGTCGACCGTCGGTTTCGGAGCTAGTGGA
AGGCCCTGCTCGGTCCTTCGTCGAGGCAATCATGCCTGTGATGCGCTTCG
TCGCACTCACTCTCGAAGAGCTTGCTAGCGACGAGGATTTGAAGGGGTTG
CTTCTGCCGCTGCAAGACTCCTTGAATGACGGCGTTGAATGCGATGTGGT
TCACGATGGAAAAGGCGCGGTTATCGCACTCAAATCTGGGGAAGGGAGTC
GGGTTCTAGCACGATTGGGCAGCCGAATTTCGCTTGAGAACGAACGGAAG
GCGCTACGTGTTCTCCAAGAGCAGTGCTCCAGTCATTTGAGCGCAATCGA
CCTAAACTCTAGTGATGTTGAAGCTTTGAGAGCGGCCGTCAGCAATTTTT
CGAACGAAGCCGGAGTATTTTCTGCTTCGTCACCTCGGGCCTTGCTCTGT
GCAACGGTGCGGGTAGGGGAAGCAATAGCCTGGTACTCACTTTTAGAGGC
ATGCAAGATCAGGACAGATGGGTCCGCAACAGGTCGACGCGAGGAGCAGA
CTTGGGCGGCATGGGTGTCTAGTCATCACGAGTTGATTGGATAG
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