mRNA_P-fluviatile_contig8.14699.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: D7G229_ECTSI (Proton gradient regulation n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G229_ECTSI) HSP 1 Score: 176 bits (446), Expect = 3.010e-51 Identity = 97/147 (65.99%), Postives = 115/147 (78.23%), Query Frame = 1
Query: 40 MWSFVCSFLFALVSLLQSEAFVVAPVRAGVSTVPSIREGSFVSSVQAMTSPISGAAEINVAMPLPR-TARGQLSMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFLW 477
M S +C L + + S+AFVVAP RAG+ST+PS+REGSFV S+ + S NVA+ PR T+RG+L M KVSKFG+FSPAV+AAKV+LGE+RLNKIRGK IALHSQVI EYCRWVGAP KVRG+LIRKAK NGDDLGFL+
Sbjct: 1 MRSILCILLACVAA---SQAFVVAPARAGLSTMPSLREGSFVCSLPSTASLTVAQGGGNVAVSRPRRTSRGELRMGKVSKFGIFSPAVVAAKVILGESRLNKIRGKGIALHSQVIQEYCRWVGAPPKVRGMLIRKAKGNGDDLGFLF 144
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A836CLY1_9STRA (Proton gradient regulation n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLY1_9STRA) HSP 1 Score: 125 bits (313), Expect = 1.160e-31 Identity = 60/75 (80.00%), Postives = 65/75 (86.67%), Query Frame = 1
Query: 253 LSMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFLW 477
L M KVSKFG+FSPAVIAAKVVLGE RLNKIRGKAIALHSQ IT +C WVGA K+RGLLI+KAK GD+LGFLW
Sbjct: 55 LHMGKVSKFGLFSPAVIAAKVVLGEARLNKIRGKAIALHSQTITSFCDWVGADSKMRGLLIKKAKTTGDELGFLW 129
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A7S2RGK8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGK8_9STRA) HSP 1 Score: 115 bits (288), Expect = 4.280e-28 Identity = 64/102 (62.75%), Postives = 76/102 (74.51%), Query Frame = 1
Query: 169 SVQAMTSPISGAAEINVAMPLPRTARGQLSMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
SVQA T+P SGA + A +ARG + M KVSKFG+FSPAV AAK VLGE LNKIRG+ I LHSQ ITE+C +VGA K+RG+LI+KAK GD+LGFL
Sbjct: 21 SVQAFTAP-SGAMTVT-ASSRRVSARGPIHMGKVSKFGIFSPAVYAAKTVLGEKNLNKIRGQGITLHSQAITEFCVYVGASPKMRGMLIKKAKTTGDELGFL 120
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: W7TSN1_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSN1_9STRA) HSP 1 Score: 112 bits (280), Expect = 7.980e-27 Identity = 60/102 (58.82%), Postives = 73/102 (71.57%), Query Frame = 1
Query: 181 MTSPISGAAEINVAMPLPR-TARGQLSM--AKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFLW 477
M +P+ A LPR +G +SM KV+KFG FSPAVI AK+VLGE +LNK+RGKAI+LHSQ ITE+C +VGA K R LI+KAK NGD+LGFLW
Sbjct: 28 MAAPLRPPASTPAPYGLPRGRQQGAMSMMGGKVAKFGFFSPAVIVAKIVLGEKKLNKVRGKAISLHSQAITEFCTFVGAQGKTRNRLIKKAKTNGDELGFLW 129
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A7S2XY75_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY75_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.570e-25 Identity = 57/88 (64.77%), Postives = 69/88 (78.41%), Query Frame = 1
Query: 217 VAMPLPRTA-RGQLSM-AKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
VA +P TA RGQ SM AKV+KFGVFSPAV AAKVVLG+ LNK+RGK IALHSQ ITE+C+++G ++R +I+ AK NGD LGFL
Sbjct: 37 VAPTVPVTATRGQYSMMAKVAKFGVFSPAVFAAKVVLGDKELNKVRGKGIALHSQAITEFCQYIGTSTQLRSRIIKLAKTNGDTLGFL 124
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A7S0B1V4_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0B1V4_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.070e-22 Identity = 49/77 (63.64%), Postives = 61/77 (79.22%), Query Frame = 1
Query: 244 RGQLSMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
+G + M K++KFG+FSPAV A+K+VLGE RLNKIRGKAI+LHSQ I ++C W GA +R LI+KAK NGD LGFL
Sbjct: 58 KGDMRMGKMAKFGIFSPAVYASKIVLGEARLNKIRGKAISLHSQYIGDFCTWAGA-YHLRTRLIKKAKTNGDILGFL 133
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A7S3EBI0_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EBI0_9RHOD) HSP 1 Score: 102 bits (254), Expect = 1.540e-22 Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 256 SMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
SMAKV+KFGVFSP VIAA+VV+GE R NK+RGK IALHSQVI ++C+++GA KVR LI AK NG+ LGFL
Sbjct: 99 SMAKVAKFGVFSPIVIAARVVIGEKRFNKVRGKGIALHSQVIGDFCKYIGAEPKVRTGLIGLAKNNGNTLGFL 171
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: B8C035_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C035_THAPS) HSP 1 Score: 100 bits (249), Expect = 2.530e-22 Identity = 51/85 (60.00%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 220 AMPLPRTARGQLSMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
A P+ RT++ L M +KFG+FSPAV AK+ LG RLNKIRGKAI+LHSQ I E+C W GA +R LI+KAK NGD LGFL
Sbjct: 45 AAPVARTSKTSLQMGSQAKFGIFSPAVYVAKIGLGNDRLNKIRGKAISLHSQYIGEFCEWAGA-YHLRTRLIKKAKTNGDTLGFL 128
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A6U0UVH1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0UVH1_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.580e-22 Identity = 48/70 (68.57%), Postives = 54/70 (77.14%), Query Frame = 1
Query: 265 KVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
KV+KFG FSPAV AAK+VLGE RLNKIRGK IALHSQ IT +C W G K+R +I+ AK NGD LGFL
Sbjct: 48 KVAKFGPFSPAVYAAKIVLGEQRLNKIRGKGIALHSQAITYFCNWAGTQGKMRNRVIKLAKTNGDRLGFL 117
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Match: A0A7S2CST4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CST4_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.980e-22 Identity = 52/94 (55.32%), Postives = 66/94 (70.21%), Query Frame = 1
Query: 193 ISGAAEINVAMPLPRTARGQLSMAKVSKFGVFSPAVIAAKVVLGETRLNKIRGKAIALHSQVITEYCRWVGAPQKVRGLLIRKAKKNGDDLGFL 474
+S AA VA+ R L M +KFG+FSPAV+AA+ VLG+ LNK+RGK I+LHSQ ITE+ +VGA RG+LI+KAK NGD+LGFL
Sbjct: 29 MSQAAAAPVALRRVPNQRSALQMGNNAKFGIFSPAVVAARAVLGDKTLNKLRGKGISLHSQAITEWTVYVGASSYQRGMLIKKAKNNGDELGFL 122 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14699.1 >prot_P-fluviatile_contig8.14699.1 ID=prot_P-fluviatile_contig8.14699.1|Name=mRNA_P-fluviatile_contig8.14699.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=147bp MWSFVCSFLFALVSLLQSEAFVVAPVRAGVSTVPSIREGSFVSSVQAMTSback to top mRNA from alignment at P-fluviatile_contig8:3927202..3929498- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14699.1 ID=mRNA_P-fluviatile_contig8.14699.1|Name=mRNA_P-fluviatile_contig8.14699.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2297bp|location=Sequence derived from alignment at P-fluviatile_contig8:3927202..3929498- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3927202..3929498- >mRNA_P-fluviatile_contig8.14699.1 ID=mRNA_P-fluviatile_contig8.14699.1|Name=mRNA_P-fluviatile_contig8.14699.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=882bp|location=Sequence derived from alignment at P-fluviatile_contig8:3927202..3929498- (Porterinema fluviatile SAG_2381)back to top |