mRNA_P-fluviatile_contig8.14691.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: A0A6H5L2D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2D8_9PHAE) HSP 1 Score: 197 bits (502), Expect = 2.430e-55 Identity = 114/146 (78.08%), Postives = 123/146 (84.25%), Query Frame = 1
Query: 559 RMDGEEIALAGSKTICKVDSLQDLVNEEEPRFILLRQDASKVLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKEQSAGGRGLAGDAVGGEH--ISSTVPAVSRPSRPGRGRARLTKRS 990
RMDGEEIAL G+KTI +V L++L++EEEPRFILLR+D SK LVYSCPEESAVRLKMTYSSSKASVVAAAAEAGV VDHMVEIRAANEIDEAV HAV G KE +AG G VGGE IS VPAV+RPSRPGRGRARLTKRS
Sbjct: 115 RMDGEEIALVGAKTIAEVADLEELIDEEEPRFILLRRDHSKFLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVTVDHMVEIRAANEIDEAVAHAVRGSKEHAAGREG----GVGGEGTTISPPVPAVARPSRPGRGRARLTKRS 256
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: A0A835YYH4_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH4_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 6.060e-15 Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 577 IALAGSKTICKVDSLQDLVNEEEPRFILLRQDASKVLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKE-QSAGGRGLAGDAVGGEHISSTVPAVSRPSRPGRGRARLT 981
I L ++T+ SL V+ EPRF LL+ + VYSCPE + VRLKMTYS+++ASVVAA A AG E EI+EA+ + + G + +AG A DA P S+PSRPGRGR RLT
Sbjct: 91 IGLGEARTVDVKSSLAPHVDAAEPRFYLLQHGDTAFFVYSCPEGAPVRLKMTYSTARASVVAAVAAAGTDCSKSFECGGPEEIEEALAYELKGVADGANAGALSAAADA----------PLPSKPSRPGRGRGRLT 216
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: A0A835YV51_9STRA (ADF-H domain-containing protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV51_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 3.960e-14 Identity = 59/136 (43.38%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 577 IALAGSKTICKVDSLQDLVNEEEPRFILLRQDASKVLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKE-QSAGGRGLAGDAVGGEHISSTVPAVSRPSRPGRGRARLT 981
I L ++T+ SL V+ EPRF LL+ + VYSCPE + VRLKMTYS+++ASVVAA A AG E EI+EA+ + + G + +AG A DA P S+PSRPGRGR RLT
Sbjct: 207 IGLGEARTVDVKSSLAPHVDAAEPRFYLLQHGDTAFFVYSCPEGAPVRLKMTYSTARASVVAAVAAAGTDCSKSFECGGPEEIEEALAYELKGVADGANAGALSAAADA----------PLPSKPSRPGRGRGRLT 332
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: A0A7S2HAE2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HAE2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 7.740e-12 Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = 1
Query: 619 LQDLVNEEEPRFILLRQD--------ASKVLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKEQSAGGRGLAGDAVGGEHISSTVPAVSRPSRPGRGRARLT 981
+ +LV+ EPRF+L++ S VYSCPEE+A+R+KMTYSS+K++++A AE G+ +D +E+ +I+ A+ + + +GG +H +S S+P RPG+GRARL+
Sbjct: 237 ISELVSNTEPRFLLVKHPNSSSDVAPTSTFFVYSCPEEAALRMKMTYSSAKSTIIAETAEEGIKIDKALEVNDTKDIEAAISSEATAQSADDSGGNAPL------KHAASE----SKPRRPGKGRARLS 355
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: A0A7S3HH81_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HH81_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 2.910e-11 Identity = 54/137 (39.42%), Postives = 75/137 (54.74%), Query Frame = 1
Query: 571 EEIALAGSKTICKVDSLQDLVNEEEPRFILLRQDASK------VLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKEQSAGGRGLAGDAVGGEHISSTVPAVSRPSRPGR 963
E I+L G +++ DSLQ ++ E FI L+ + + ++SCPE S VR+KMT SSSKASV+AAA + G+ D +EIR A+E+DEAV A R S GG S+ + +P RPGR
Sbjct: 209 EIISLVGFRSVTADDSLQSFIDTENASFIALKLPKGEESGDISLFIFSCPENSPVRVKMTMSSSKASVLAAAQQLGITFDKTLEIRDADEVDEAVRSARFPRATDS--------PVPGGS--SAAAGSHGKPQRPGR 335
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: W4H6K0_9STRA (ADF-H domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6K0_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 2.530e-9 Identity = 50/144 (34.72%), Postives = 72/144 (50.00%), Query Frame = 1
Query: 559 RMDGEEIALAGSKTICKVDSLQDLVNEEEPRFILLRQ-----DASKVLVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKEQSAGGRGLAGDAVGGEHISSTVPAVSRPSRPGRGRAR 975
RM EE+ + S I + D + LV++E+P F+L R + VY CPE + VRLKMTYS++KAS++ G+ VD +E+ A + EA L G++ EH +RP+ PGRGRAR
Sbjct: 198 RMTNEELVVDASVHITRDDQINALVDKEQPSFVLYRSLVDDPTPTTFFVYICPEAANVRLKMTYSTAKASLLHDLQRRGILVDSTIEVTDAWNVLEA-----------------LQGNSSKHEHDDGHPKVFARPAAPGRGRAR 324
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Match: A0A485LD04_9STRA (Aste57867_19609 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD04_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 8.530e-7 Identity = 47/145 (32.41%), Postives = 74/145 (51.03%), Query Frame = 1
Query: 559 RMDGEEIALAGSKTICKVDSLQDLVNEEEPRFILLRQDASKV------LVYSCPEESAVRLKMTYSSSKASVVAAAAEAGVAVDHMVEIRAANEIDEAVEHAVSGRKEQSAGGRGLAGDAVGGEHISSTVPAVSRPSRPGRGRAR 975
R+ EE+ + S D + V ++ P F++ R S V +Y CPEE+ VRLKMTYS++KAS+++ + G+ VD M+EI + + +++ HA A AV + + + SRP+ PGRGR R
Sbjct: 197 RIKDEELTVGSSIPNMHEDQVNSAVEKQTPSFVVYRYTGSAVDGPTTLFLYVCPEEANVRLKMTYSTAKASLLSDLQQRGIKVDKMIEITDTSNVLDSI-HA------------DFASAAVTADE-DNRPKSFSRPAAPGRGRGR 327 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14691.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14691.1 >prot_P-fluviatile_contig8.14691.1 ID=prot_P-fluviatile_contig8.14691.1|Name=mRNA_P-fluviatile_contig8.14691.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=144bp MDGEEIALAGSKTICKVDSLQDLVNEEEPRFILLRQDASKVLVYSCPEESback to top mRNA from alignment at P-fluviatile_contig8:3855720..3859646- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14691.1 ID=mRNA_P-fluviatile_contig8.14691.1|Name=mRNA_P-fluviatile_contig8.14691.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3927bp|location=Sequence derived from alignment at P-fluviatile_contig8:3855720..3859646- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3855720..3859646- >mRNA_P-fluviatile_contig8.14691.1 ID=mRNA_P-fluviatile_contig8.14691.1|Name=mRNA_P-fluviatile_contig8.14691.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=864bp|location=Sequence derived from alignment at P-fluviatile_contig8:3855720..3859646- (Porterinema fluviatile SAG_2381)back to top |