mRNA_P-fluviatile_contig8.14681.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14681.1
Unique NamemRNA_P-fluviatile_contig8.14681.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: D8LKW0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKW0_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.770e-78
Identity = 141/188 (75.00%), Postives = 157/188 (83.51%), Query Frame = 1 
Query: 1693 VGVRAELLLSSNVHAGRVAAFAGGSAGALLVSQEFG-------PVRHGVTKISLADPRHRKDLKNLHAAQVRDVKFSEERGGVGYVLSTSFDKTVKVCDLRTDSVVVEYGLEGNGWSCQWSATNPTQMFCGVVDGTRTAALQLFDLRFTSGAVGKLRAAARQRQPIHSICHTADDHLFCATMGGVWAW 2235
            V VR E LLS +V +GRVAAFAGG+AGAL+VSQE G        +RHGVTK SLAD RH K + +LH  QVRDVKFS + G VGY+LSTSFDKT+KVCDLRTDSVVV+Y LEG+GWSCQWS+T PTQMFCGVVDGTRT+A+QLFDLR T+GAV KLRAAA QRQPIHSICHTADD L CATMGGVWAW
Sbjct:  273 VAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSI-HLHREQVRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTAPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAW 459
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A6H5JB60_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB60_9PHAE)

HSP 1 Score: 274 bits (700), Expect = 3.330e-77
Identity = 140/188 (74.47%), Postives = 157/188 (83.51%), Query Frame = 1 
Query: 1693 VGVRAELLLSSNVHAGRVAAFAGGSAGALLVSQEFG-------PVRHGVTKISLADPRHRKDLKNLHAAQVRDVKFSEERGGVGYVLSTSFDKTVKVCDLRTDSVVVEYGLEGNGWSCQWSATNPTQMFCGVVDGTRTAALQLFDLRFTSGAVGKLRAAARQRQPIHSICHTADDHLFCATMGGVWAW 2235
            V VR E LLS +V +GRVAAFAGG+AGAL+VSQE G        +RHGVTK SLAD RH K + +LH  Q+RDVKFS + G VGY+LSTSFDKT+KVCDLRTDSVVV+Y LEG+GWSCQWS+T PTQMFCGVVDGTRT+A+QLFDLR T+GAV KLRAAA QRQPIHSICHTADD L CATMGGVWAW
Sbjct:  348 VAVRFEQLLSRDVLSGRVAAFAGGAAGALVVSQELGIAGGSRGSLRHGVTKFSLADLRHNKSI-HLHREQLRDVKFSADGGSVGYILSTSFDKTLKVCDLRTDSVVVQYELEGSGWSCQWSSTTPTQMFCGVVDGTRTSAVQLFDLRSTAGAVRKLRAAASQRQPIHSICHTADDVLCCATMGGVWAW 534
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A813Y3E3_9BILA (Hypothetical protein n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813Y3E3_9BILA)

HSP 1 Score: 100 bits (248), Expect = 3.150e-18
Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 2 
Query:  635 GDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQNASLKDQLAL 973
            GD E CSICL+ WT+ G HR+  L CGHLFG+ CIERWLK    CPQC          R+    L+ +   DT EL+ A   LE+ER+LRK+CE E   + ++   ++D+L++
Sbjct:   90 GDEETCSICLEPWTNSGIHRLVCLKCGHLFGEGCIERWLKTNPKCPQCNRPSKRSDIRRIYARALKVI---DTAELDKALKDLEDERQLRKKCEIETSEIKLRFQIVRDELSI 199
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A267GDQ9_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GDQ9_9PLAT)

HSP 1 Score: 97.1 bits (240), Expect = 8.620e-18
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = 2 
Query:  617 SPQRPPGDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQNASLKDQ-LALARQ 982
            SP +P  +G  C+IC + WTS G+HR+C L CGHLFG+SC+ERWL+ R+ CPQC         H V+PL++ NL A D  E E  +  +++ +R +   E E   + ++   L+D+   L+RQ
Sbjct:  238 SPPQPADEG--CTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRR---HEVLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRLSRQ 355
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: UPI00193A6C01 (E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A6C01)

HSP 1 Score: 97.8 bits (242), Expect = 2.090e-17
Identity = 49/102 (48.04%), Postives = 65/102 (63.73%), Query Frame = 2 
Query:  638 DGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQ 943
            DG+ C IC + W++ GKHR+ +L CGHLFGQSCIERW+K  + CPQC  K   K   RV  L+ + L A DT EL  A T  E E++LR+  E E  ++ +Q
Sbjct:  161 DGDCCPICFEHWSNSGKHRLSSLKCGHLFGQSCIERWMKGAKKCPQCNTKA-RKADIRV--LYAKKLTAVDTTELTEATTAFEHEKKLRRNKEMELAKVQMQ 259
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A8D0B1V4_9SAUR (Ring finger and WD repeat domain 3 n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0B1V4_9SAUR)

HSP 1 Score: 97.8 bits (242), Expect = 2.500e-17
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 2 
Query:  614 PSPQRPPGDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLK-ERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQNASLKDQLALARQ 982
            P+P      GE CSIC +EWT+ G+HR+  L CGHLFG +CIERWLK +   CPQC  K  +K S  V+ L+ + L A DT E E  ++ LE+E+ LR++ E E  +  +Q   L D+ +  RQ
Sbjct:  217 PNPSEEEESGETCSICFEEWTNAGEHRLSALRCGHLFGYNCIERWLKGQAGKCPQCNKK--AKRSDIVV-LYARTLKALDTSEKEHMKSSLEKEQMLRRKAELESAQSRLQLQVLTDECSKLRQ 337
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A1I8IIU3_9PLAT (RING-type domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8IIU3_9PLAT)

HSP 1 Score: 97.1 bits (240), Expect = 2.570e-17
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = 2 
Query:  617 SPQRPPGDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQNASLKDQ-LALARQ 982
            SP +P  +G  C+IC + WTS G+HR+C L CGHLFG+SC+ERWL+ R+ CPQC         H V+PL++ NL A D  E E  +  +++ +R +   E E   + ++   L+D+   L+RQ
Sbjct:  238 SPPQPADEG--CTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRR---HEVLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRLSRQ 355
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A851UBM4_9PASS (RFWD3 ligase (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A851UBM4_9PASS)

HSP 1 Score: 97.8 bits (242), Expect = 2.630e-17
Identity = 52/116 (44.83%), Postives = 75/116 (64.66%), Query Frame = 2 
Query:  638 DGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLK-ERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQNASLKDQLALARQ 982
            +G+ C+IC ++WT+ G+HR+C L CGHLFG +CIERWLK +   CPQC  K  +K S  V+ L+ + L A DT E E  R+ LE+E+ LR+Q E E  +  +Q   L D+ +  R+
Sbjct:  255 EGDTCAICFEQWTNAGEHRLCALRCGHLFGYTCIERWLKGQAGKCPQCNKK--AKRSDIVV-LYARTLKALDTSEQERMRSSLEKEQMLRRQAELESAQSRLQLQVLTDECSKLRK 367
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A8C8ZVZ8_PROSS (Ring finger and WD repeat domain 3 n=2 Tax=Lemuridae TaxID=9445 RepID=A0A8C8ZVZ8_PROSS)

HSP 1 Score: 97.8 bits (242), Expect = 2.690e-17
Identity = 52/104 (50.00%), Postives = 69/104 (66.35%), Query Frame = 2 
Query:  614 PSPQRPPGDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLK-ERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAE 922
            PSP     +GE C+ICL++WT+ G HR+  L CGHLFG SCI +WLK + R CPQC  K  +K S  V+ L+ + L A DT E E A++ L++E+ LRKQ E E
Sbjct:  265 PSPSMNEEEGETCTICLEQWTNAGDHRLSALRCGHLFGYSCISKWLKGQARKCPQCNRK--AKHSDIVV-LYARTLRALDTSEQELAKSSLQKEQMLRKQAEVE 365
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BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Match: A0A267DN52_9PLAT (RING-type domain-containing protein n=4 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267DN52_9PLAT)

HSP 1 Score: 97.1 bits (240), Expect = 4.630e-17
Identity = 50/123 (40.65%), Postives = 75/123 (60.98%), Query Frame = 2 
Query:  617 SPQRPPGDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCIERWLKERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEEERRLRKQCEAERRRLSVQNASLKDQ-LALARQ 982
            SP +P  +G  C+IC + WTS G+HR+C L CGHLFG+SC+ERWL+ R+ CPQC         H V+PL++ NL A D  E E  +  +++ +R +   E E   + ++   L+D+   L+RQ
Sbjct:  238 SPPQPADEG--CTICFEPWTSSGEHRVCALRCGHLFGKSCVERWLETRQQCPQCNRNCRR---HEVLPLYVTNLRAVDNSENEALKLEIDKIKRAKLTAEQEAGDMRLRLDMLRDENRRLSRQ 355
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14681.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKW0_ECTSI1.770e-7875.00RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB60_9PHAE3.330e-7774.47RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A813Y3E3_9BILA3.150e-1844.25Hypothetical protein n=1 Tax=Brachionus calyciflor... [more]
A0A267GDQ9_9PLAT8.620e-1840.65RING-type domain-containing protein n=1 Tax=Macros... [more]
UPI00193A6C012.090e-1748.04E3 ubiquitin-protein ligase RFWD3-like n=1 Tax=Sty... [more]
A0A8D0B1V4_9SAUR2.500e-1744.35Ring finger and WD repeat domain 3 n=1 Tax=Salvato... [more]
A0A1I8IIU3_9PLAT2.570e-1740.65RING-type domain-containing protein n=1 Tax=Macros... [more]
A0A851UBM4_9PASS2.630e-1744.83RFWD3 ligase (Fragment) n=2 Tax=Passeriformes TaxI... [more]
A0A8C8ZVZ8_PROSS2.690e-1750.00Ring finger and WD repeat domain 3 n=2 Tax=Lemurid... [more]
A0A267DN52_9PLAT4.630e-1740.65RING-type domain-containing protein n=4 Tax=Macros... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3766434..3772329 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score207.2
Seed ortholog evalue1.8e-50
Seed eggNOG ortholog2880.D8LKW0
KEGG koko:K15691
GOsGO:0000075,GO:0000077,GO:0000278,GO:0000724,GO:0000725,GO:0002039,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006302,GO:0006310,GO:0006464,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0007093,GO:0007346,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0010564,GO:0010948,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0022402,GO:0031297,GO:0031570,GO:0031571,GO:0031974,GO:0031981,GO:0032446,GO:0033554,GO:0034641,GO:0034645,GO:0036211,GO:0036297,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045005,GO:0045786,GO:0045930,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051726,GO:0065007,GO:0070013,GO:0070647,GO:0071704,GO:0080134,GO:0080135,GO:0090304,GO:0090734,GO:0097371,GO:0140096,GO:1901360,GO:1901564,GO:1901576,GO:1901976,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902806,GO:1902807,GO:1903047,GO:2000001,GO:2000045,GO:2000134,GO:2001020
EggNOG free text desc.MDM2/MDM4 family protein binding
EggNOG OGsKOG1645@1,KOG1645@2759
Ec32 ortholog descriptionWD40/YVTN repeat-like-containing domain
Ec32 orthologEc-11_005750.1
EC2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko04121
Hectar predicted targeting categoryother localisation
Exons8
Model size2236
Cds size1530
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14681.1prot_P-fluviatile_contig8.14681.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3766723..3769960 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817217.2753394-UTR-P-fluviatile_contig8:3766433..37667221622817217.2753394-UTR-P-fluviatile_contig8:3766433..3766722Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3766434..3766722 +
1693571542.4151673-UTR-P-fluviatile_contig8:3766433..37667221693571542.4151673-UTR-P-fluviatile_contig8:3766433..3766722Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3766434..3766722 +
1622817217.3490412-UTR-P-fluviatile_contig8:3769960..37699651622817217.3490412-UTR-P-fluviatile_contig8:3769960..3769965Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3769961..3769965 +
1693571542.6355934-UTR-P-fluviatile_contig8:3769960..37699651693571542.6355934-UTR-P-fluviatile_contig8:3769960..3769965Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3769961..3769965 +
1622817217.3603384-UTR-P-fluviatile_contig8:3770726..37708611622817217.3603384-UTR-P-fluviatile_contig8:3770726..3770861Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3770727..3770861 +
1693571542.646927-UTR-P-fluviatile_contig8:3770726..37708611693571542.646927-UTR-P-fluviatile_contig8:3770726..3770861Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3770727..3770861 +
1622817217.3720238-UTR-P-fluviatile_contig8:3771424..37715171622817217.3720238-UTR-P-fluviatile_contig8:3771424..3771517Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3771425..3771517 +
1693571542.6552646-UTR-P-fluviatile_contig8:3771424..37715171693571542.6552646-UTR-P-fluviatile_contig8:3771424..3771517Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3771425..3771517 +
1622817217.3829978-UTR-P-fluviatile_contig8:3772145..37723291622817217.3829978-UTR-P-fluviatile_contig8:3772145..3772329Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3772146..3772329 +
1693571542.961862-UTR-P-fluviatile_contig8:3772145..37723291693571542.961862-UTR-P-fluviatile_contig8:3772145..3772329Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3772146..3772329 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817217.2861826-CDS-P-fluviatile_contig8:3766722..37670701622817217.2861826-CDS-P-fluviatile_contig8:3766722..3767070Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3766723..3767070 +
1693571542.5878363-CDS-P-fluviatile_contig8:3766722..37670701693571542.5878363-CDS-P-fluviatile_contig8:3766722..3767070Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3766723..3767070 +
1622817217.297562-CDS-P-fluviatile_contig8:3767439..37674951622817217.297562-CDS-P-fluviatile_contig8:3767439..3767495Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3767440..3767495 +
1693571542.599171-CDS-P-fluviatile_contig8:3767439..37674951693571542.599171-CDS-P-fluviatile_contig8:3767439..3767495Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3767440..3767495 +
1622817217.3101063-CDS-P-fluviatile_contig8:3767898..37679591622817217.3101063-CDS-P-fluviatile_contig8:3767898..3767959Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3767899..3767959 +
1693571542.6079848-CDS-P-fluviatile_contig8:3767898..37679591693571542.6079848-CDS-P-fluviatile_contig8:3767898..3767959Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3767899..3767959 +
1622817217.3249109-CDS-P-fluviatile_contig8:3768194..37683501622817217.3249109-CDS-P-fluviatile_contig8:3768194..3768350Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3768195..3768350 +
1693571542.616204-CDS-P-fluviatile_contig8:3768194..37683501693571542.616204-CDS-P-fluviatile_contig8:3768194..3768350Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3768195..3768350 +
1622817217.3372068-CDS-P-fluviatile_contig8:3769051..37699601622817217.3372068-CDS-P-fluviatile_contig8:3769051..3769960Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3769052..3769960 +
1693571542.6262832-CDS-P-fluviatile_contig8:3769051..37699601693571542.6262832-CDS-P-fluviatile_contig8:3769051..3769960Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3769052..3769960 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14681.1

>prot_P-fluviatile_contig8.14681.1 ID=prot_P-fluviatile_contig8.14681.1|Name=mRNA_P-fluviatile_contig8.14681.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=510bp
MESASNVIDLTRLAEAAAVGDSGVGLGNTDSSHGGNPIAPALLVPQASAA
PGAPSASEAVTDSTSAVQVAAAAAAAAARPRPTGKSDDADNGQSAASPAS
KKRKAAPPPSPQRPPGDGEHCSICLDEWTSKGKHRICTLLCGHLFGQSCI
ERWLKERRSCPQCGAKVGSKGSHRVIPLFLQNLVAKDTGELETARTLLEE
ERRLRKQCEAERRRLSVQNASLKDQLALARQASRGDGGGGSGCKPAPPGR
SSASKDLPFDGFSANRAVHETWLPWSAPGGSATGLRHAETSSPRQASFPS
LLEYRVSNGVPLVQTFASPRAEEHAQAGASSSPPGGPGARGISPAPRRPP
RGGRSCRLRVPGGSTAAAPFPDRRARRRRRRLRPYFHRHRGANPSAPAPR
VRRRRRQDKPRSPLLGPELWAELFWTGEGAWRRLRRCRRTARCSTARRCA
GKGVTPRWRRRWRRRTGGSGCGRSCCSRATCTPGEWQRLRGDRQEPCWSR
KSLGRCGTV*
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mRNA from alignment at P-fluviatile_contig8:3766434..3772329+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14681.1 ID=mRNA_P-fluviatile_contig8.14681.1|Name=mRNA_P-fluviatile_contig8.14681.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5896bp|location=Sequence derived from alignment at P-fluviatile_contig8:3766434..3772329+ (Porterinema fluviatile SAG_2381)
CCCTAGGAGCTGCTCGGTCGTAGCGCTTCATAGAGTCAGACAGCAGGGTT
GGGTGATCGATTGCGACTTCCTCGCTGCAGCATTGTCGGGACGGATGAAT
CGCTGATCTCAAGGTGGCCGTTCGAAGTGAAGCAGCGCTGAGGCAGCGCT
GCAAGTGGGTTCTTCCATCTCACTGACCGAAGCCGTCTCACACACAGCCA
GCGTACCCGTCCACAGATGCTTTGACCCTCGCACACACGCAGGAGGCGTG
AACGTGGAATCTACTGCGGCATGTAATACATTTCTGGCGATGGAATCAGC
TTCGAACGTCATCGATCTCACTCGTCTAGCGGAAGCAGCAGCCGTCGGCG
ACTCTGGGGTCGGACTGGGAAACACCGACAGCAGCCACGGCGGCAATCCC
ATAGCACCGGCACTTCTCGTGCCGCAAGCTTCAGCGGCACCAGGAGCACC
ATCAGCGTCCGAAGCTGTCACCGATTCAACATCAGCAGTACAAGTGGCGG
CAGCCGCGGCGGCGGCGGCGGCGAGACCGAGGCCAACGGGGAAAAGCGAC
GACGCCGACAACGGACAAAGCGCAGCTTCTCCGGCGAGTAAGAAGAGGAA
GGCCGCACCACCACCCTCGCCGCAACGTCCTCCGGGGGTGAGGAGTGGCA
GGAGAGCTGCCGATTTGTCTCCCCCCACAATGCACGTTTATTTCCAGAGT
ATTGCAGATTGTTTGCTGCGTCTCGACGTTTGTCATGAAGGTAGGCAGCC
GGGCCGTCAGATTCGGACATGAAGTATGCGGAAACTGTACGGAACTACCA
TAACACCAACGATTAAACGTTTGTACGGGTGGGACAGCAAAAGGACGGCG
GAAGGCCGAGGGGGAAAGTGATCGGAAAACATGGTAGTAACGCCAAACGG
CTTCCCCTTTCCAGATTGTTAGCGAGTCCGTTCCAACGCTTGACATCGAC
TGCTCGACCTGTCTGCTCGATGGCGGTTTGCCGACCTCCCCGTTTGCCCC
ACCCAGGACGGCGAGCACTGCAGCATCTGCTTGGACGAATGGACGTCTAA
AGGCAAACATAGGTGTGGTAAAATAGGCGCGCGACGGGCCTCTTCCGCAA
GACCGGCGGTGTAGAAAATGTTCGGGCGGACGTCCCACCGGTGTCTTCCT
CCTACGCCTGTCTCCCAGCCCCTGCCCTGCATCAAACGCAAGCCGATATT
TTGAAAAGGGGTATCCACCGCTCCATTTGGGTGATTCAGTCGCCGCTGCT
TTGCATGCGTCCGCATCTCGTTTACGCTCGTATCAGAGTCCTAAGGGGTA
ATTTTAAGGTGCAGCGAAAATACCAACCAGAGATGCCCCTCTTTCAGGTT
AAGAGATTGCACACAAGCGTGGGCGGAAGGATCTCGTTGTCTTGAGGACG
CACGGCATGCTACGTAGATCGACCCTGACTGAGACTGATGTTGTGCTGCT
CGACCGCTCCCTCAGGATCTGCACCCTCCTCTGCGGGCATCTCTTTGGGC
AGTCGTGCATCGAGAGGTGGCTAAAGGTGAGCGGGCTTTGCAGTCTGTCG
CTTGATCTGAAGCACTCGCCGTTGAAGGCGCTTCCACTCCTCGTTAATGC
TGCGGGGGGAAGCCGCCATGTAGACAAACTGCCGCCGCCGGTACGCGGAG
AGCTCATACCTCGGGACAGGTTTCATCTCGGGCACATTCTTCTCAAAATC
CTGACGCTCCCTGGGCCCCGTTCCTCTCTTGTTCTTGTTCGCCCCGCGGG
ATCTCGTGCAGGAGAGGCGCAGCTGCCCACAATGCGGTGCGAAAGTGGGT
TCGAAGGGTAGCCACAGGGTCATCCCACTGTTTCTGCAGAATCTCGTCGC
GAAGGACACGGGCGAGCTGGAAACCGCGCGAACGCTCCTCGAAGAAGAGA
GGCGGCTTCGGAAACAGGTGAAGATACTTTATCGTTCTCGGATGTCCAAC
CTTCCTTTGCAGGCTTCGACGTTTCTCCCATCATTCTGGTGGCTTGTTGC
ACTCTCGAGAATCTGACACCCAGCGTACTCCGTGCAAATCTCACTTACCG
CCGTTCGCTGCATTCGAAAACTGAACCAGATGAAAGCGCTTTGGAACAGT
TCTTGCGCGCAATCAGACCCTGCCCGCTCCTCTTCTAAAGCCTAGTACAC
GGCGGCTTTGTTCGGACCTCGTATGTAGAACGGCCTGAGCCGAAAACGAG
CCAGGCGCGCAAGGTGGAGCAGCCTTGCTATGGACTCTTGGGGTTTTCAT
GTATCTTTTCCGATTTTCCGCGGAGCCAGTCGGTGCTTTTGCTAGGCATA
CATAGGGCGATACACGATACAGACACAATTCATCGACAAACGCCACCGAT
GTTGTCTTTGAATTTTCCACGTGGCGGGGCTCGTGTCTTAGTTTTTGCCT
CACTCGCCCATGTGTTCCGTGCAGTACCGCGTCTTCAAGGGCAAAAAAAG
CACACTGTCGTATCTGCGTTGCCGAGCGCTCTCGGCTTTTCTTGAGTTCG
CTCTTCTTGTTTGAGCATATCCACGAAGCACGCGCTCGTATCTCTCAGTC
CCCTTTCCTCGATGCTCGCGCCTGGCATCGCTGCTCCATGTCGATGCTCG
ATGCGAAAACATCGCTAGTGCGAGGCTGAGAGAAGGCGGCTGTCGGTCCA
GAACGCGAGCTTGAAGGACCAGCTTGCCCTCGCTCGTCAGGCCAGCAGGG
GCGATGGCGGTGGCGGCAGTGGGTGCAAGCCCGCTCCGCCGGGTAGATCT
AGCGCCTCTAAAGATCTGCCCTTCGATGGCTTCAGCGCGAATCGTGCCGT
TCATGAAACGTGGTTACCGTGGTCGGCACCGGGGGGATCCGCGACGGGGT
TGCGCCATGCGGAGACCTCATCACCAAGGCAGGCGTCCTTCCCGTCGCTC
CTAGAGTATAGGGTCTCGAACGGCGTACCACTTGTGCAGACGTTCGCTTC
ACCGCGAGCTGAGGAACATGCTCAGGCTGGTGCCTCCTCGTCGCCCCCGG
GAGGGCCCGGGGCGCGAGGCATCAGTCCAGCCCCCAGGCGTCCTCCCCGA
GGCGGTCGTTCCTGCCGTCTTCGGGTGCCGGGGGGTTCGACGGCGGCGGC
ACCCTTTCCCGACAGGCGGGCTCGCCGTCGACGGCGTCGATTGAGGCCTT
ATTTTCATCGCCACCGCGGCGCGAATCCCTCGGCGCCGGCGCCCCGCGTT
CGCCGGCGTCGTCGCCAAGACAAGCCTCGTTCTCCGCTGTTGGGGCCGGA
GCTCTGGGCGGAGCTGTTTTGGACAGGAGAAGGGGCGTGGCGTCGACTCC
GACGATGCCGCCGGACCGCTCGCTGCAGCACGGCTCGCCGCTGCGCAGGG
AAAGGCGTGACGCCGCGATGGCGGCGGCGGTGGCGGAGGCGGACAGGGGG
GTCGGGGTGCGGGCGGAGCTGCTGCTCTCGAGCAACGTGCACGCCGGGAG
AGTGGCAGCGTTTGCGGGGGGATCGGCAGGAGCCTTGCTGGTCTCGCAAG
AGTTTGGGCCGGTGCGGCACGGTGTGACTAAGGTGGGATGGGATGAGATG
GGGTAGGATGGGGTTGGATGGGACGACACCGATGGGGTGGTGATGGGGAT
GGGGATGGGGATGGGGATGGGGATGGGGATGGGATGGGATGGAATTGGAC
GGGATGGGATGGGATGGGATGGGACTACCACTGCTCTTGCGGCTTCAGCT
GAGATCGACTCATGTCCGCAGCCACACTCGTTTGAAAATTGACTGCTGTT
TTCGGCGATGTTGGTGAAGAAGAAATGTCCCGGCATCAAGCCCCCCACGC
CCGGTCGAAACCAGGGACGAAATGTTTTGTTGTGTGCTCCTGCCTATTCT
AGCCTTGCCGTCTCCCCGCCATAGCTTTTAACTCATCAGTCACTCAACCC
CAGCCTCGGAACTCGATATATGCGGCGACGTCTTTCGTGCTCTTGAGCCC
GTGACCTTCGCTTTCTTCGTTTCCCACCGTTTCATTCCCTGGAATGCATC
TTGTTGCTGCTGTGATGTAAAATGTGGCTGCTACAGTCGGGTTGTAAATA
TGCCGGTCCCGAGATACGCGATCAGCCAGTAGTGTACAACCTCCTGAGGC
CAAAGGCTCAGCACGAGAAAGAACACGGAACGGCAATAGGACAAGCGCTT
TGCCTGACGCAAGGAGGCGCGGAGGCACGGAGGCACGGAGGCACGAGGAC
GTCTTACCATTTGATCACCCCCCTGCTATCCTACGGTGCCCCCGCTGCCC
ACCCGCCCGCCACTCGCCTCGTTGTTGTCGTCATTTTGACCAGATCAGCC
TCGCAGATCCCCGGCACCGCAAGGATCTGAAAAATCTTCACGCAGCGCAG
GTCAGGGACGTAAAGTTTTCGGAGGAAAGGGGCGGCGTTGGGTACGTTCT
AAGCACGTCGTTCGACAAGACCGTCAAGGTGAGGAAGGAGGTGGTCATGG
TGTTAGCAGACGATTTACAGAAGAAAATGCCCGATTATTTCTGGCCTAGG
GCCGTTGAGGTTGCTGCTCAAAGCACTCGGGATTTTAGGTCACCGCCCTT
CGCGATTCGGCCCATGATGTCTTTCATGTCGGTGCCTTTTTTTTTTTTTT
TTTTTTTTTTGCGGTATGCGTCTCTTGTTGTACCCGTACCGTGCCTTCCT
ACACGAGACACATCCACCCTCGTCTGGAAATCCCTTTCCGTAGCGGAGTG
ATATCTGCATCCCTCGTCTACTGAGCTGTTCCGAATTATTTCTTCTGGAA
GAGAGTGGAGAGCGCTGCTTCGAAATCGGGGATGTGCGGGGTATCCCGCA
TGAATAATTACACCAACGCTGGTGTATCTTGGTACTAGACAAGTGGCGCC
ACATGAAGTCAGATATCGTACTCCACTGATGCCCAAGTTCATCCACTAGG
TCGTTCTTGAATTTGTTTACTTTTCGCACGATTCTACTTGCAGCCCTTGT
GTCCTTGGCAGCATTGATGCATATTCGCCAACTGTTGGCAGGTTTGTGAC
CTGCGGACGGACAGCGTGGTTGTCGAATACGGGCTAGAGGGGAACGGTTG
GTCGTGCCAGTGGAGTGCGACGAACCCTACCCAGGTGCGCTGCAACCTAC
GCCAGACGAACAATTCTGTGCAAGCCCCCCTGCTGCTACTCTCGTCAGCA
GAATTGGACGTTTTCGCTTTCGTGTCGCCGCTGCTTCTTCTTCTGATGCT
GTTGCCGCCGCTCCTGGTGCTCAAATGACGCCGGCGTTAAGGCGACGTTC
CATGCTGCTGTTGTCCTACCGCGAACGACCGTTACGTTGAATACTGCACA
ACCCAGCCGTCGGATCTGACTCTGTCAGCATACTTCTCTGGAGTTCGTCT
CCCCTGATGAATGTGGCTCAAGCACTGTCATCCTCAAAAAGGCCCCACCT
TTCAGAGAATTCGTCTCGATGCTATGAGAAAAACGTCTTTGCTCGTTCTA
CGGATCGGACACATTCAGCATCCCTCGTCGGTCGTAGGATACTGTTGAGA
GATGCCAAGGTGACGCTATTTGTGCGCCATTTTTTATCGTGGTTTGCTCG
AGGCGCATCCATGCGGGTTCAAATGACCCCTTTCAGGTGTCCCGGATGAG
TATGAACGCAGAACCCAAAGTGTTTTGTACCTTTGTAATGGTCCTCACTT
ATCCCCTCCTTTCTATCCCCTTCGCCCCCTCAACTTCTCCTACGAATCGA
ATATGCGTCCAGATGTTTTGTGGCGTCGTCGACGGGACCAGGACAGCAGC
CCTCCAGCTCTTCGACCTTCGCTTCACGTCGGGGGCCGTCGGCAAGCTAC
GCGCAGCGGCGCGGCAGAGGCAGCCTATCCACAGCATCTGTCACACCGCC
GACGATCACCTTTTTTGCGCCACCATGGGAGGCGTTTGGGCTTGGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig8:3766434..3772329+

>mRNA_P-fluviatile_contig8.14681.1 ID=mRNA_P-fluviatile_contig8.14681.1|Name=mRNA_P-fluviatile_contig8.14681.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3060bp|location=Sequence derived from alignment at P-fluviatile_contig8:3766434..3772329+ (Porterinema fluviatile SAG_2381)
ATGGAATCAGCTTCGAACGTCATCGATCTCACTCGTCTAGCGGAAGCAGC
AGCCGTCGGCGACTCTGGGGTCGGACTGGGAAACACCGACAGCAGCCACG
GCGGCAATCCCATAGCACCGGCACTTCTCGTGCCGCAAGCTTCAGCGGCA
CCAGGAGCACCATCAGCGTCCGAAGCTGTCACCGATTCAACATCAGCAGT
ACAAGTGGCGGCAGCCGCGGCGGCGGCGGCGGCGAGACCGAGGCCAACGG
GGAAAAGCGACGACGCCGACAACGGACAAAGCGCAGCTTCTCCGGCGAGT
AAGAAGAGGAAGGCCGCACCACCACCCTCGCCGCAACGTCCTCCGGGGAT
GGAATCAGCTTCGAACGTCATCGATCTCACTCGTCTAGCGGAAGCAGCAG
CCGTCGGCGACTCTGGGGTCGGACTGGGAAACACCGACAGCAGCCACGGC
GGCAATCCCATAGCACCGGCACTTCTCGTGCCGCAAGCTTCAGCGGCACC
AGGAGCACCATCAGCGTCCGAAGCTGTCACCGATTCAACATCAGCAGTAC
AAGTGGCGGCAGCCGCGGCGGCGGCGGCGGCGAGACCGAGGCCAACGGGG
AAAAGCGACGACGCCGACAACGGACAAAGCGCAGCTTCTCCGGCGAGTAA
GAAGAGGAAGGCCGCACCACCACCCTCGCCGCAACGTCCTCCGGGGGACG
GCGAGCACTGCAGCATCTGCTTGGACGAATGGACGTCTAAAGGCAAACAT
AGGACGGCGAGCACTGCAGCATCTGCTTGGACGAATGGACGTCTAAAGGC
AAACATAGGATCTGCACCCTCCTCTGCGGGCATCTCTTTGGGCAGTCGTG
CATCGAGAGGTGGCTAAAGGATCTGCACCCTCCTCTGCGGGCATCTCTTT
GGGCAGTCGTGCATCGAGAGGTGGCTAAAGGAGAGGCGCAGCTGCCCACA
ATGCGGTGCGAAAGTGGGTTCGAAGGGTAGCCACAGGGTCATCCCACTGT
TTCTGCAGAATCTCGTCGCGAAGGACACGGGCGAGCTGGAAACCGCGCGA
ACGCTCCTCGAAGAAGAGAGGCGGCTTCGGAAACAGGAGAGGCGCAGCTG
CCCACAATGCGGTGCGAAAGTGGGTTCGAAGGGTAGCCACAGGGTCATCC
CACTGTTTCTGCAGAATCTCGTCGCGAAGGACACGGGCGAGCTGGAAACC
GCGCGAACGCTCCTCGAAGAAGAGAGGCGGCTTCGGAAACAGTGCGAGGC
TGAGAGAAGGCGGCTGTCGGTCCAGAACGCGAGCTTGAAGGACCAGCTTG
CCCTCGCTCGTCAGGCCAGCAGGGGCGATGGCGGTGGCGGCAGTGGGTGC
AAGCCCGCTCCGCCGGGTAGATCTAGCGCCTCTAAAGATCTGCCCTTCGA
TGGCTTCAGCGCGAATCGTGCCGTTCATGAAACGTGGTTACCGTGGTCGG
CACCGGGGGGATCCGCGACGGGGTTGCGCCATGCGGAGACCTCATCACCA
AGGCAGGCGTCCTTCCCGTCGCTCCTAGAGTATAGGGTCTCGAACGGCGT
ACCACTTGTGCAGACGTTCGCTTCACCGCGAGCTGAGGAACATGCTCAGG
CTGGTGCCTCCTCGTCGCCCCCGGGAGGGCCCGGGGCGCGAGGCATCAGT
CCAGCCCCCAGGCGTCCTCCCCGAGGCGGTCGTTCCTGCCGTCTTCGGGT
GCCGGGGGGTTCGACGGCGGCGGCACCCTTTCCCGACAGGCGGGCTCGCC
GTCGACGGCGTCGATTGAGGCCTTATTTTCATCGCCACCGCGGCGCGAAT
CCCTCGGCGCCGGCGCCCCGCGTTCGCCGGCGTCGTCGCCAAGACAAGCC
TCGTTCTCCGCTGTTGGGGCCGGAGCTCTGGGCGGAGCTGTTTTGGACAG
GAGAAGGGGCGTGGCGTCGACTCCGACGATGCCGCCGGACCGCTCGCTGC
AGCACGGCTCGCCGCTGCGCAGGGAAAGGCGTGACGCCGCGATGGCGGCG
GCGGTGGCGGAGGCGGACAGGGGGGTCGGGGTGCGGGCGGAGCTGCTGCT
CTCGAGCAACGTGCACGCCGGGAGAGTGGCAGCGTTTGCGGGGGGATCGG
CAGGAGCCTTGCTGGTCTCGCAAGAGTTTGGGCCGGTGCGGCACGGTGTG
ATGCGAGGCTGAGAGAAGGCGGCTGTCGGTCCAGAACGCGAGCTTGAAGG
ACCAGCTTGCCCTCGCTCGTCAGGCCAGCAGGGGCGATGGCGGTGGCGGC
AGTGGGTGCAAGCCCGCTCCGCCGGGTAGATCTAGCGCCTCTAAAGATCT
GCCCTTCGATGGCTTCAGCGCGAATCGTGCCGTTCATGAAACGTGGTTAC
CGTGGTCGGCACCGGGGGGATCCGCGACGGGGTTGCGCCATGCGGAGACC
TCATCACCAAGGCAGGCGTCCTTCCCGTCGCTCCTAGAGTATAGGGTCTC
GAACGGCGTACCACTTGTGCAGACGTTCGCTTCACCGCGAGCTGAGGAAC
ATGCTCAGGCTGGTGCCTCCTCGTCGCCCCCGGGAGGGCCCGGGGCGCGA
GGCATCAGTCCAGCCCCCAGGCGTCCTCCCCGAGGCGGTCGTTCCTGCCG
TCTTCGGGTGCCGGGGGGTTCGACGGCGGCGGCACCCTTTCCCGACAGGC
GGGCTCGCCGTCGACGGCGTCGATTGAGGCCTTATTTTCATCGCCACCGC
GGCGCGAATCCCTCGGCGCCGGCGCCCCGCGTTCGCCGGCGTCGTCGCCA
AGACAAGCCTCGTTCTCCGCTGTTGGGGCCGGAGCTCTGGGCGGAGCTGT
TTTGGACAGGAGAAGGGGCGTGGCGTCGACTCCGACGATGCCGCCGGACC
GCTCGCTGCAGCACGGCTCGCCGCTGCGCAGGGAAAGGCGTGACGCCGCG
ATGGCGGCGGCGGTGGCGGAGGCGGACAGGGGGGTCGGGGTGCGGGCGGA
GCTGCTGCTCTCGAGCAACGTGCACGCCGGGAGAGTGGCAGCGTTTGCGG
GGGGATCGGCAGGAGCCTTGCTGGTCTCGCAAGAGTTTGGGCCGGTGCGG
CACGGTGTGA
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