mRNA_P-fluviatile_contig8.14658.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: A0A6H5LM37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM37_9PHAE) HSP 1 Score: 254 bits (648), Expect = 8.880e-75 Identity = 145/224 (64.73%), Postives = 167/224 (74.55%), Query Frame = 1
Query: 1291 MATFAQQS---------SPEEVLKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQT---RTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLRRERVGGDG 1926
M+TF Q SPEE L+K+L++L+AQRDALEL +AIA EL S GANGEAPVG+KG LVD++G+P AG DL NVR KRHRFNCIQTDHKAVMS+IE SLHALH+ R AR T S TA +PPA + AAA +S++PIAKVNQVSEGSPA+ AGL VGDLVLRFG +DISHPKGLGG+VDVVREKEGQEVPVTVLR V G+G
Sbjct: 1 MSTFPDQPQQPQQQAIPSPEEALRKELVVLQAQRDALELEADAIASELKSPGANGEAPVGVKGALVDADGFPLAGFDLFNVREKRHRFNCIQTDHKAVMSRIEKSLHALHDARLARPTPLPTAFSVTAATPPASSLIGMDSAA-----AAADMSLAPIAKVNQVSEGSPASAAGLAVGDLVLRFGHVDISHPKGLGGVVDVVREKEGQEVPVTVLRTTSVSGEG 219
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: A0A7S3HBQ7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBQ7_9STRA) HSP 1 Score: 130 bits (328), Expect = 8.360e-31 Identity = 80/205 (39.02%), Postives = 118/205 (57.56%), Query Frame = 1
Query: 1291 MATFAQQSSPEEVLKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALH-ELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLR 1902
M ++ S E+L+ L L AQRDALE +AI EL S G NGE P G+K P VD+EGYPR +D++NV+ KR R I TD+KA+M +IE ++ LH EL PP P + A T + A L P+AK++++ GSPAA AG+++ DL+++FG++ + L +V++V + Q +P+ VLR
Sbjct: 1 MEFTSESKSRMEILRGTLNNLSAQRDALEAEADAIHSELTSPGINGEPPAGIKTPFVDAEGYPRGDIDIINVKDKRRRLAEINTDYKALMKQIEQTMLQLHNEL---------------PPVPTSVPTASENTDSNTTVAPLK--PMAKLDEIFPGSPAATAGIQLNDLLMQFGTVTSNTNNFLKSIVELVGKNVNQPIPMVVLR 188
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: A0A834CI79_ORYME (26S proteasome non-ATPase regulatory subunit 9 n=3 Tax=Oryzias TaxID=8089 RepID=A0A834CI79_ORYME) HSP 1 Score: 118 bits (296), Expect = 1.440e-26 Identity = 72/203 (35.47%), Postives = 111/203 (54.68%), Query Frame = 1
Query: 1300 FAQQSSPE--EVLKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLR 1902
+++SPE + D+ L ++D +E A L G VG++GPLVD+EGYPRA V+L +R+ RH +C+Q DHKA+M++IE +LH LH A++ + + T+ P P P A+V+ V+EGSPA+ AGL VGD V+ FGS++ + + L + VV+ EG+ + V V+R
Sbjct: 3 MTEENSPEMSNITIDDVNALIKKKDEIEEQIKAYFDVLEDQG------VGIEGPLVDAEGYPRADVNLYQIRTARHNISCLQNDHKAIMAEIEEALHKLHACEKAKREQDQAETSEEPMEQEVTLPP----------------PFARVDTVTEGSPASAAGLRVGDEVIEFGSVNTKNFQNLQNIASVVQHSEGKALRVGVIR 183
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: A0A7S2WPH7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPH7_9STRA) HSP 1 Score: 119 bits (297), Expect = 4.410e-26 Identity = 81/216 (37.50%), Postives = 113/216 (52.31%), Query Frame = 1
Query: 1330 LKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALH-----------------------ELRAAR-QTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLRR 1905
L+K LL L+ +R ++E AI EL S G NG G+ PLVD EG+PRA +D+ NVR KRHR C++TDH VM +IE SLHALH E+ + R Q S+TA A+ P ++P A P A++ +V+ GSP+++ G+ GD +L FG++ + + L GL D V GQEV V V R+
Sbjct: 18 LRKALLDLDKRRASIEEEAQAIEEELESPGPNGAPCPGVHSPLVDQEGFPRADIDVYNVRHKRHRLACLRTDHSTVMREIERSLHALHAATTGGVGGTEEPLDIPGPHGEAEIGSGRNQASRGSNTAPEVSGTASSSPQLRQSSPAFIA------PFARIGEVTGGSPSSLGGIREGDELLEFGTVTAHNHRDLHGLADFVAGHVGQEVHVVVRRQ 227
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: UPI0019555146 (26S proteasome non-ATPase regulatory subunit 9 isoform X1 n=3 Tax=Pimephales promelas TaxID=90988 RepID=UPI0019555146) HSP 1 Score: 116 bits (290), Expect = 1.010e-25 Identity = 74/193 (38.34%), Postives = 106/193 (54.92%), Query Frame = 1
Query: 1327 VLKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMS-PIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLR 1902
V ++D+ +L ++D +E A L + + VG+ GPLVD EG+PRA VDL VRS RH +C+Q DHKAVM +IE +LH LH A A R + T + + T+S+S P A V+ V++GSPA AGL VGD ++ FGS+ + + L + VV+ EG+ + V VLR
Sbjct: 14 VAERDVRLLMKRKDEIEEQIKAYYDMLQTKPFLQQEGVGMDGPLVDVEGFPRADVDLYKVRSARHSISCLQNDHKAVMVEIEEALHTLH-------------------ATARVREGKDETKMEASGQTVSLSSPFALVDTVTQGSPAFQAGLRVGDEIMEFGSVKTQNFRNLRDIASVVQHSEGKSLRVGVLR 187
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: A0A2I4BYJ6_9TELE (26S proteasome non-ATPase regulatory subunit 9 n=3 Tax=Rivulidae TaxID=28771 RepID=A0A2I4BYJ6_9TELE) HSP 1 Score: 114 bits (286), Expect = 3.950e-25 Identity = 72/201 (35.82%), Postives = 111/201 (55.22%), Query Frame = 1
Query: 1306 QQSSPE--EVLKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLR 1902
+++SPE EV D+ L ++D +E A L G VG++GPLVD EGYPRA V+L +R+ RH +C+Q DHKA+M++IE +LH LH A++ + ++ + T P P A+V+ V+EGSPA+ AGL VGD ++ FGS++ + + L + VV+ EG+ + V V+R
Sbjct: 15 RENSPEGSEVTMDDVKNLIKKKDEIEEQIKAYYDVLEDQG------VGVEGPLVDEEGYPRADVNLYQIRTARHNISCLQNDHKAIMAEIEEALHKLHARDKAKREQDATEAQEAMEQQITLPP-----------------PFARVDAVTEGSPASGAGLRVGDEIIEFGSVNTGNFQNLQNIASVVQHSEGKPLRVGVIR 192
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: H2LN00_ORYLA (26S proteasome non-ATPase regulatory subunit 9 n=7 Tax=Oryzias TaxID=8089 RepID=H2LN00_ORYLA) HSP 1 Score: 114 bits (285), Expect = 4.260e-25 Identity = 62/155 (40.00%), Postives = 93/155 (60.00%), Query Frame = 1
Query: 1438 VGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLR 1902
VG++GPLVD+EGYPRA V+L +R+ RH +C+Q DHKA+M++IE +LH LH A++ + + P P P A+V+ V+EGSPA+ AGL+VGD V+ FGS++ + + L + VV+ EG+ + VTV+R
Sbjct: 45 VGVEGPLVDAEGYPRADVNLYQIRTARHNISCLQNDHKAIMAEIEEALHKLHAREKAKREQDQAEATEEPMEQQVTLPP----------------PFAQVDTVTEGSPASAAGLKVGDEVIEFGSVNTKNFQNLQNIASVVQHSEGKALRVTVVR 183
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: UPI001455599A (26S proteasome non-ATPase regulatory subunit 9-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001455599A) HSP 1 Score: 114 bits (284), Expect = 4.450e-25 Identity = 73/182 (40.11%), Postives = 100/182 (54.95%), Query Frame = 1
Query: 1357 AQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLR 1902
A++D++E + L S G VG+ GPL+DSEGYPR +D+ + R+ RHR C+Q DHKA+M IE SLH LH RQ R + + A + A +++ P A ++ VSEGSPAA AGL VGD ++ FGSI S+ K L + VVR +G+ V V LR
Sbjct: 14 AEKDSIEREIKELYDVLESQGN-----VGMDGPLIDSEGYPRNDIDVYSARTARHRIICLQNDHKALMVNIENSLHDLHSYE--RQQREQGESLPTNGA---------------STAAIALIPFASIDLVSEGSPAANAGLLVGDEIIEFGSICTSNFKSLQDIATVVRHSQGRSVRVVTLR 173
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: UPI0003F0E6C4 (26S proteasome non-ATPase regulatory subunit 9 isoform X1 n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F0E6C4) HSP 1 Score: 113 bits (283), Expect = 9.440e-25 Identity = 75/189 (39.68%), Postives = 105/189 (55.56%), Query Frame = 1
Query: 1339 DLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHELRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLRR 1905
D+ L ++D +E A L S + VG+ PLVD E YPRA VDL VR+ RH C+Q DHKA+M ++E +LH LH +Q R A + A+CRP + P A A AKVN +S GSPA+ AGL+V D ++ FGS++ + + L + DVV+ EG+ + VTV+RR
Sbjct: 22 DVKELMRRKDEIEAQIKANYDVLES-----QKGVGMNEPLVDGEDYPRADVDLYQVRTARHNIVCLQNDHKAIMKQVEEALHQLHARDKEKQAR---DMAEAQSEAASCRPDQ---GPHPAQA------FAKVNSISPGSPASTAGLQVDDEIVEFGSVNTQNFQSLQNVGDVVQHSEGKPLNVTVIRR 193
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Match: Q6GLK7_XENLA (26S proteasome non-ATPase regulatory subunit 9 n=3 Tax=Xenopus TaxID=262014 RepID=Q6GLK7_XENLA) HSP 1 Score: 112 bits (281), Expect = 1.310e-24 Identity = 70/205 (34.15%), Postives = 115/205 (56.10%), Query Frame = 1
Query: 1303 AQQSSPEEVLKKDLLMLEAQRDALELXXNAIAGELNSSGANGEAPVGLKGPLVDSEGYPRAGVDLLNVRSKRHRFNCIQTDHKAVMSKIETSLHALHE-LRAARQTRTSSSTARSPPAPATCRPARTTTAPDIAAATLSMSPIAKVNQVSEGSPAAIAGLEVGDLVLRFGSIDISHPKGLGGLVDVVREKEGQEVPVTVLRRERV 1914
A++ +V +D+ +L +++D +E A+ L + +G+ GPLVD EGYPRA VD+ VR+ RH C+Q DHKA+M KIE SLH LH + R+ + +S A + AA AKV+ V+ GSPA+++GL+VGD ++ FG+++ + + L + +VV+ EG+ + V+V+R E++
Sbjct: 4 AEELCESDVTVRDVQLLISKKDEMEAEIKALYDLLQD-----QKGIGMDGPLVDREGYPRADVDIYQVRTARHNIICLQNDHKAIMKKIEQSLHILHAGEKEKREVEAQAEALQSHQA--------------LPAA------FAKVDVVTPGSPASMSGLQVGDEIIAFGTVNTRNFQSLQNIAEVVQHSEGKPLSVSVVRNEKL 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14658.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14658.1 >prot_P-fluviatile_contig8.14658.1 ID=prot_P-fluviatile_contig8.14658.1|Name=mRNA_P-fluviatile_contig8.14658.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=213bp MATFAQQSSPEEVLKKDLLMLEAQRDALELEANAIAGELNSSGANGEAPVback to top mRNA from alignment at P-fluviatile_contig8:3597632..3601159- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14658.1 ID=mRNA_P-fluviatile_contig8.14658.1|Name=mRNA_P-fluviatile_contig8.14658.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3528bp|location=Sequence derived from alignment at P-fluviatile_contig8:3597632..3601159- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3597632..3601159- >mRNA_P-fluviatile_contig8.14658.1 ID=mRNA_P-fluviatile_contig8.14658.1|Name=mRNA_P-fluviatile_contig8.14658.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1278bp|location=Sequence derived from alignment at P-fluviatile_contig8:3597632..3601159- (Porterinema fluviatile SAG_2381)back to top |