mRNA_P-fluviatile_contig8.14657.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig8.14657.1 vs. uniprot
Match: D8LKZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKZ1_ECTSI) HSP 1 Score: 792 bits (2045), Expect = 2.990e-280 Identity = 423/623 (67.90%), Postives = 463/623 (74.32%), Query Frame = 2
Query: 20 LDRMLRRLGLA---------TEVGTNGVGK-DVVRVSSDPFVSQSRFFKVVYPGRVAVRSSPSEPALPQSQSFGRGDVLEVKGLAIAVPEGVVVELKQPQGGYVFQKHGDRTLLEEVEGLKVEEGDWWYRVVHPAGARFVKIPSLQPNAPRHTPSVPQHTVVHACRRHTPPGSIVSFVELSGNKGWIVESAKDGAVLEKSADGHFMVENITGDYRDDSEAWYEVVAEGGVELLQEPDQSTGRMLELFLPGKAFCSAQRFQPPGQAATYLKVKGRGAWVLQRLGSDGEEACKKLPPPMDEAVKQWYRVLYPGGVRLRASPAFEHTDSSLGVLVCGWIFLATRRYRAPGSSHMMLQVATPEGVVKDA--EEGN-LGGXXXXXXXXXXXGRGALEQARRAARRQCGWVPSTSNGMEVVEETQEPWIERGRFAYQVVVDETLSATTGPHENAPGIMQQLPPYSVVAAATFLETGDGREGFVQLEGDGSWVCTRRGQKNNMVRLPALPNVDKTPRRFVVAAPGGVETVVGPSPLAPPTGQLLPPGTEGRSEMVWSVEGWPGDRGVGDSKFVLLEGMGWVQVNAGKEGGAALLREVDIPPPV--PSPPNGG-----ELQPQPQENGSST 1828
L +ML+RLGL TE G NG K +VV V Q+RF K SFG GDV+EV+GLA+AVPEGVVVELKQPQ G+VFQKHGDRTLLEEVE LKVEEGDWWYRVVHPAGARF KIPSL P PRHT +VPQ+TVVHACRRHTPPGS V+FVELS NKGWIVES K+ AVLE+S+DG +MVENITG YRDDSEAWY+VV E GVELL+ PD + RMLELFLPGKAFC ++RFQPP Q +T+LKVKGR AWV+QR SDGEEACKKLPPPMDEAV+QWYRV YPGGVRLRASPAFEHTD SLGVLVCGW+FLATRRYRAPGSSHM+LQVATPEGVV+D+ E G + LEQARR ARR CGWVPSTSNG EVV VDETL A TGPH NAPG QQLPPYSV AAATFLETGDG EGFVQL G GSWV +RRGQ MVRLPA P VDKTPRRFVV+APGGVETVVGPSP AP TGQLLP G EG SEMVWSV+GWPGDRGVGD +FVLLEGMGWVQ++AG E LRE+ PPP PSP +G + Q Q +ENGSS+
Sbjct: 31 LHKMLQRLGLTKASVNGANGTE-GANGEAKREVVSVPPVEEFEQARFLK----------------------SFGFGDVVEVRGLAVAVPEGVVVELKQPQSGFVFQKHGDRTLLEEVEALKVEEGDWWYRVVHPAGARFAKIPSLLPQTPRHTIAVPQNTVVHACRRHTPPGSSVTFVELSDNKGWIVESTKEKAVLEQSSDGKYMVENITGHYRDDSEAWYQVVDESGVELLEAPDAGSTRMLELFLPGKAFCVSERFQPPEQGSTFLKVKGREAWVVQRAESDGEEACKKLPPPMDEAVEQWYRVQYPGGVRLRASPAFEHTDPSLGVLVCGWVFLATRRYRAPGSSHMLLQVATPEGVVRDSSSEYGETVDVYGSSSDDSDWDNEDELEQARRGARRHCGWVPSTSNGEEVV------------------VDETLLANTGPHVNAPGSPQQLPPYSVAAAATFLETGDGLEGFVQLAGTGSWVLSRRGQDTKMVRLPAFPRVDKTPRRFVVSAPGGVETVVGPSPSAPRTGQLLPLGAEGSSEMVWSVKGWPGDRGVGDRRFVLLEGMGWVQLDAGTEQEGGPLREIGAPPPXXQPSPFDGTREGAVDEQRQQEENGSSS 612
BLAST of mRNA_P-fluviatile_contig8.14657.1 vs. uniprot
Match: A0A7S2UXS7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS7_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 8.960e-8 Identity = 78/316 (24.68%), Postives = 140/316 (44.30%), Query Frame = 2
Query: 122 SRFFKVVYPGRVAVRSSPSEPALPQSQSFGRGDVLEVKGLAIAVPEGVVV----ELKQP--QGGYVFQK----HGDRTLLEEVEGL------KVEEGDWWYRVVHPAGARFVKIPSLQPNAPRHTPSVPQHTVVHACRRHTP-PGSIVSFVELSGNKGWIVES-------------AKDGAVLEKSADGHFM--VENITGD--YRDDSEA--WYEVVAEGGVELLQEPD---QSTGRMLELFLPGKAFCSAQRFQPPGQAATYLKVKGRGAWVLQRLGSDGEEACKKLPPPMDEAVKQWYRVLYPGGVRLRASPAF 952
S F++VV+P VAVR +P G+V+E+ + + + P + G+VF++ + + + +EEV+ L KV++ D++YRV+H GA+ + + + RH +P TVV A RR P S + ++ ++G+I+E+ + D A E S G + +E ++D+E +++VV E GV + +E QST +L+ + C P ++ + WV R+ +++P ++ YRV+Y GGV +R P F
Sbjct: 20 SFFYRVVHPKGVAVRETPDVEGRKTGTCLFYGEVVEISQKVKLLDDDTTYLRMDHFRDPWMRKGWVFERVRALNPETSRMEEVQALEPMKPPKVQQDDFFYRVIHQDGAQLA-VKARMDSELRHE-RLPFGTVVEASRRVKPFEASDILYLRPDSHEGFILETPGGEMLLKAPPPASVDPAAEEASQRGEMLPTLERFEPQPAEQEDNEGTFFFQVVCEPGVFVRKEAKLCAQSTRTLLKAETTFTSTCLRTLKYPGLGEVSFARCDAARGWV--RIQKHKIPIIREVPDAVENGPFN-YRVVYEGGVSVRTEPRF 330 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14657.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig8.14657.1 >prot_P-fluviatile_contig8.14657.1 ID=prot_P-fluviatile_contig8.14657.1|Name=mRNA_P-fluviatile_contig8.14657.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=602bp MLRRLGLATEVGTNGVGKDVVRVSSDPFVSQSRFFKVVYPGRVAVRSSPSback to top mRNA from alignment at P-fluviatile_contig8:3587652..3597709+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig8.14657.1 ID=mRNA_P-fluviatile_contig8.14657.1|Name=mRNA_P-fluviatile_contig8.14657.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10058bp|location=Sequence derived from alignment at P-fluviatile_contig8:3587652..3597709+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig8:3587652..3597709+ >mRNA_P-fluviatile_contig8.14657.1 ID=mRNA_P-fluviatile_contig8.14657.1|Name=mRNA_P-fluviatile_contig8.14657.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3612bp|location=Sequence derived from alignment at P-fluviatile_contig8:3587652..3597709+ (Porterinema fluviatile SAG_2381)back to top |