mRNA_P-fluviatile_contig8.14656.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig8.14656.1
Unique NamemRNA_P-fluviatile_contig8.14656.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: D8LL04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL04_ECTSI)

HSP 1 Score: 616 bits (1589), Expect = 4.460e-212
Identity = 345/538 (64.13%), Postives = 378/538 (70.26%), Query Frame = 1
Query:   82 QGRATTDVEKHAQLLRGLGSKLRHRNLKQTSAFKDVFEAHKGLLHINEKLRQQTIRQDQDIIILRHKLTEGLSQGESSEALRTIQGEMQRLQVQISDKYRSSAEAASEQLRLMKEAQLLQDQLKHCNQRLERLQAEHGLSMSRCTSLEHDNAALESALASLRKETESLRKLLGSKEADVVVFREQARKEREELVSRLLNDKRSMLEEMNKMNEDNAALREEKKTFLARLXXXXXXXXXXXXXXQVRQRATSGAMGGDDERTEAGTAPAWLSQGKQKQGGAGGDSAAFANXXXXXXXXXXACSASSFGGRNKVGPASAELPSRCFQAIEAHSSGVNDVAFERGGVLLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKV 1695
            +G +T    +H  LLR L SKL  RNL+++  FKDVF AH+GLLHINEKL QQ ++QD+DIIILRHKLTEGLSQGESSEALR +Q E+QRLQVQ+SDKYRSSAE+ASEQLRLMKEAQLLQDQLKH N+R                                                                          MLEEMNKMNE+N+ LR++KK   A+L              Q R+RATSG MGGD+ER EAGTAPAWLSQ +Q      GD     +          A S +S   +   GPAS  LPSRCFQAIEAHSSGVN V FE+GGVLLATAGDDSYVKVWDP SGRQRA LKGAAHKG+AAMITVDIH D VCGG SDGSCTVW+LRT REQARLTGHQQKVCAV+FCD GQRLVTGSQDCSIKVWDLHRGQWNA T AMRATSKCNAVDVSHSWKDSKGTNAVVVSGHM+GAVRLWDMRSGSCAHQL+GLH D VTSVRFAPGR NLLLTNSKDS+LKV
Sbjct:    7 KGDSTAADSRHKGLLRSLASKLARRNLEESVPFKDVFLAHQGLLHINEKLTQQMLQQDKDIIILRHKLTEGLSQGESSEALRRMQDELQRLQVQVSDKYRSSAESASEQLRLMKEAQLLQDQLKHSNER--------------------------------------------------------------------------MLEEMNKMNEENSTLRQDKKDLAAKLQQQEKGIQDTTTAAQARRRATSGVMGGDNERPEAGTAPAWLSQEQQV-----GDDP---SQQPQGEGDMPASSWASGLRKKNAGPASTGLPSRCFQAIEAHSSGVNGVVFEKGGVLLATAGDDSYVKVWDPGSGRQRAALKGAAHKGMAAMITVDIHGDLVCGGASDGSCTVWSLRTSREQARLTGHQQKVCAVSFCDTGQRLVTGSQDCSIKVWDLHRGQWNAMTTAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMDGAVRLWDMRSGSCAHQLKGLHTDHVTSVRFAPGRANLLLTNSKDSSLKV 462          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A836CNH8_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH8_9STRA)

HSP 1 Score: 278 bits (710), Expect = 1.610e-80
Identity = 216/611 (35.35%), Postives = 288/611 (47.14%), Query Frame = 1
Query:  220 NEKLRQQTIRQDQDIIILRHKLTEGLSQG-ESSEALRTIQGEMQRLQVQISDKYRSSAEAASEQLRLMKEAQLLQDQLKHCNQRLERLQAEHGLSMSRCTSLEHDNAALESALASLRKETESLRKLLGSKEADVVVFREQARKEREELVSRLLNDKRSMLEEMNKMNEDNAALREEKKTFLARLXXXXXXXXXXXXXXQVRQRATSGAMGGDDERTEAGTAPAWLSQGKQKQGGAGGDSAAFANXXXXXXXXXXACSASSFGGRNKVGPASAELPSRCFQAIEAHSSGVNDVAFERGGVLLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQ-----ARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAAANGNVYVWDIIANSXXXXXXXXXXXXXXXXXXXXXXXVATVLQTHGVAATGCDWCLNMPSKLASCDSKGGLRVW 2034
            N  LRQ +I  D+++IILRHK++EGL  G + SEA+R +QGE+ RL  Q+SDKYR  AE  SEQLRL+   Q L+  L+     LERLQ EHG +M+R                                          +  E E L+SR+L DK+             A LRE +   L                    +R T  A+G          A A  + G++   G+G  S+A                      R  V  + A +PSRC   + AH+SG+NDV F   G L+A+ GDD  VKVWD ASG+QRA L  A   G++A                                    A LTGHQQKVCAV +   G+ L TGS DCSIKVWDL R QW++T   MRA SK NA+D   S     G ++ +VSGH +G++R WD R+ +  H + GLH DQ+TSV+ +   G  +LT S+D+TLKV+D R Y+  AC++H  +R A+ F RAC SP A YAAA + +  VYVWD+                           +   L+TH  A   CDW      +L SCD  G + +W
Sbjct:    6 NADLRQHSIAADRELIILRHKVSEGLGGGGQDSEAMRAMQGELSRLHEQVSDKYRGQAEYVSEQLRLVMRVQELEAALRQSASALERLQVEHGETMARGAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRATRA----STAESESLLSRVLEDKQXXXXXXXXXXXXLATLRESRAAAL--------------------RRHTDPALG----------AIAAAADGRR---GSGSGSSA----------------------RGSV--SGATVPSRCRHRLPAHASGINDVVFSESGALIASGGDDGCVKVWDTASGQQRAKLSAA---GVSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAHLTGHQQKVCAVVWWGDGRHLATGSHDCSIKVWDLER-QWSSTPQLMRAPSKVNALD---SGAGGSG-DSTLVSGHFDGSLRFWDPRAAAKMHTITGLHSDQITSVQCS---GMNVLTASRDNTLKVLDVRSYETTACVSHDYYRAAAHFGRACLSPDATYAAAGSGDRLVYVWDLAGGR-----------------------LVAQLETHTAAVIACDWSPARGGQLVSCDRDGWMAIW 521          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A7R9WGS3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WGS3_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.650e-50
Identity = 169/573 (29.49%), Postives = 258/573 (45.03%), Query Frame = 1
Query:  145 LRHRNLKQTSAFKDVFEAHKGLLHINEKLRQQTIRQDQDII---ILRHKLT-EGLSQGESSEALRTIQGEMQRLQVQISDKYRSSAEAASEQLRLMKEAQLLQDQLKHCNQRLERLQAEHGLSMSRCTSLEHDNAALESALASLRKETESLRKLLGSKEADVVVFREQARKEREELVSRLLNDKRSMLEEMNKMNEDNAALREEKKTFLARLXXXXXXXXXXXXXXQVRQRATSGAMGGDDERTEAGTAPAWLSQGKQKQGGAGGDSAAFANXXXXXXXXXXACSASSFGGRNKVGPASAELPSRCFQAIEAHSSGVNDVAFERGGV-LLATAGDDSYVKVWDPASGRQRAVLKGA-AHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAAAN-GNVYVWDI 1842
            L HRN  +T  FK VF+++  L  + +  + +    DQ +I   +   KL+ E   +G S   +R  + ++++LQ Q+++K RS  EA++  L+   E   L+D        +  L+ E+       T L    A  ES      K+   L+  + S + +     ++ +K   ELV R + +K  M++++NKMNE                XX             +       +   D+E+                                                  + G      PS     I+AH      V ++  G  L+ATA  DS VK+WD ++G+ RA L+G   H     M+ VDI      G GSD +C VWNLRT R   +L GH  K+  V      + ++TGS D S+KVWD+ R  +  TT  +R +S  N+VDVS     S       VSGHM+G +R WD+RSG     +Q LH+  VTSV+F+P     +LTN +DSTLK+VD R    +    HP+FRT  +++    SP   YAAA + + G+V+VW +
Sbjct:   19 LLHRNTVETEPFKSVFQSNLALQSLVDDFQYRCEILDQKVIEQSVEIDKLSAEAGGKGPSKNEIRQRE-KIEKLQEQLNEKLRSEVEASAAALKSATEVSDLKDLNTSQQATISNLREENARVEKNITHLNSKLADAESVARLAEKQYMGLKDTIRSLQEE----NDELKKVNHELVKRTVTEKEGMVDQINKMNEXXXXXXXXXXXXXXXXXXEDRRPGWLRKRMVIASPTKEESTSKDEEKDNH---------------------------------------------SRRWGAMGVICPSEPKHIIQAHPQEATAVKYDGTGTDLVATASSDSNVKIWDTSNGQVRATLRGGNGHP----MLGVDISGGLAVGCGSDKTCRVWNLRTQRMIHQLAGHSHKITCVRLFHTEKEIITGSADRSLKVWDITRSTYRQTT-TLRHSSTSNSVDVSSDAMTS-------VSGHMDGGIRFWDVRSGERTLDIQSLHQGGVTSVQFSPNNSTQILTNGRDSTLKLVDMRTCATLQVFQHPEFRTLLNYASCSLSPDGMYAAAGSTSTGDVFVWKV 529          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A7S2XSX3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XSX3_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.780e-50
Identity = 110/271 (40.59%), Postives = 153/271 (56.46%), Query Frame = 1
Query: 1036 LPSRCFQAIEAHSSGVNDVAFER-GGVLLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAAAN-GNVYVWDI 1842
            +P+     I+AHSS V  V ++  G  L+AT+ +DS V+VWD +SG  RA L+G +     AM+  DI    V G  SD SC VW L T R   +L GH  KV        G+ ++T S D SIK+WD+ R  +  TT  +R +S  N +DVS+  K        VVSGHM+G VR WD+RSG    +++ LH   VT     P  G  +LTN +DS LK+VD RM  V++ +TH DFRT  ++S   +SP   YAAA +   G++ +W +
Sbjct:   76 IPTEAKHVIQAHSSEVTSVRYDGVGSDLVATSSNDSTVRVWDTSSGAMRATLRGGSGH---AMMGCDIVGGLVVGCASDKSCRVWKLSTQRMIHQLVGHGNKVTCARLISGGKEVLTASADRSIKLWDISRNTYRQTT-TLRHSSTANCLDVSYDTK-------TVVSGHMDGGVRFWDIRSGEKTAEIETLHTGGVTCAHLHPTNGTQILTNGRDSVLKLVDIRMGSVISTMTHKDFRTPFNWSACSYSPDGVYAAAGSGTTGDIMIWRV 335          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A7S3XT70_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XT70_HETAK)

HSP 1 Score: 172 bits (436), Expect = 2.450e-45
Identity = 95/260 (36.54%), Postives = 147/260 (56.54%), Query Frame = 1
Query: 1255 GGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAAANGNVYVWDIIANSXXXXXXXXXXXXXXXXXXXXXXXVATVLQTHGVAATGCDWCLNMPSKLASCDSKGGLRVW 2034
            G  +D +  VW+  + R    L GH  ++ AV      + ++T S D  +KVWD+ R +  A T  +RATS CNA DV+          A V++GH +G +R WD+RSG+  + ++ LH+ Q+TSV ++P   + +LTNS+D+TLK+VDAR Y+V+  ++HP +RT+ ++SR  FSP+ AYAAA + +G+V+V+D+   S                       V T+L  H  A + C W     S+L SCD +G L +W
Sbjct:    2 GASTDRTGFVWSAASGRRAHHLQGHGARLHAVRLFPGARTVLTASGDRCVKVWDIAR-EMCACTTTLRATSSCNAADVAPD-------GAAVLTGHQDGGLRFWDVRSGAKVNDIKSLHQSQITSVMYSPDNASTILTNSRDNTLKLVDARTYEVITTMSHPSYRTSYNWSRTTFSPNGAYAAAGSGDGSVFVFDVYDGS-----------------------VKTILTHHRSAVSSCYW---SSSQLMSCDREGFLTLW 227          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A7S2AAH2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2AAH2_TRICV)

HSP 1 Score: 181 bits (458), Expect = 7.400e-45
Identity = 105/263 (39.92%), Postives = 147/263 (55.89%), Query Frame = 1
Query: 1060 IEAHSSGVNDVAFERGGV-LLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAAA-NGNVYVWDI 1842
            ++AH+     V ++  G  L+ATA  DS VK+WD  SG+ RA L+G +      M+ VDI      G GSD +C VWNLRT R   +L GH QK+         + ++TGS D S+KVWD+ R  +  TT  MR +S  N++DVS+           VVSGHM+G +R WDMR+      +  LH   +TSV F+P     LLT+ +DSTLK+VD R    +    H DFRT  +++    SP   YAAA +  +G+V+VW +
Sbjct:  279 LQAHAQEATAVRYDGTGTDLVATASSDSTVKIWDTGSGQVRATLRGGSGY---PMLGVDISGGLAVGCGSDKTCRVWNLRTQRMIHQLAGHSQKITCCRLFQNEKGVITGSADRSLKVWDISRSTYRQTT-TMRHSSTSNSLDVSNDA-------VTVVSGHMDGGLRFWDMRTADRTADISSLHEGGITSVYFSPSNNTHLLTSGRDSTLKLVDMRTCTTLQTFFHGDFRTLVNYASCSLSPDGVYAAAGSGTSGDVFVWRV 530          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A7S2Y1Y4_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y1Y4_9STRA)

HSP 1 Score: 172 bits (435), Expect = 8.330e-42
Identity = 97/248 (39.11%), Postives = 136/248 (54.84%), Query Frame = 1
Query: 1105 GGVLLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAA-ANGNVYVWDII 1845
            G  L+ TAG DS VKVWD  SG  R  L G+       M+  D++   V G  SD +C VWN+RT R    L GHQ K+     C  G+ ++TGS D S+KVWD+ R  +  TT  +R  S  + +DV     DS       VSGHM+G +R WD+R+G    +++ +H   + SV+F+P     +LTN  DS +K+VD R    V    H +F T  +FS A  SP   YAAA + +NG +++WD +
Sbjct:  296 GNDLVVTAGSDSSVKVWDTNSGSARVTLHGSPGH---TMMACDMYGSVVIGASSDKTCRVWNMRTERMLHHLVGHQHKISCARLCAQGEAVLTGSADRSLKVWDISRQTYKQTT-TLRHGSTAHCLDVG---SDSFSA----VSGHMDGGLRFWDLRTGDRTTEIREMHDGGICSVQFSPVSSTQVLTNGLDSCVKLVDIRTGTAVHTFRHAEFSTVQAFSAAVLSPDGKYAAAGSNSNGTIFIWDAV 532          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A2P6VHV3_9CHLO (Autophagy-related 16 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VHV3_9CHLO)

HSP 1 Score: 162 bits (411), Expect = 1.330e-37
Identity = 115/338 (34.02%), Postives = 167/338 (49.41%), Query Frame = 1
Query: 1033 ELPSRCFQAIE-AHSSGVNDVAFERGGVLLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLV-TGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAAANGNVYVWDIIANSXXXXXXXXXXXXXXXXXXXXXXXVATVLQTHGVAATGCDWC-LNMPSKLASCDSKGGLRVWG 2037
            ELP+   ++I  AH+ G   +AF R G  LA+ G D  VK+W+P++    A L G+     A   T D  A  V    +  +   W++ + R +  LTGHQ KV  VA   A   +V T + D +IK+W L +G    T   +   S CN + +S          A++ SGH +GA+R WD+RSG  AH++ GLH  Q+TSV      G+++LT  KD+ L+ VD R ++V   L+ P F    +++ AC SPS   AAA +A+G +++WD+   S                            Q H  +A  C WC L +P  L S D  GGL  WG
Sbjct:  593 ELPTAVVKSIAGAHAGGCYGLAFSRTGAQLASGGADKTVKIWEPSTATPLATLHGSFEGINAVAFTSD--ARLVLAAENKLAVRAWDVSSGRLRLSLTGHQNKVTGVACSPADANVVATCAADRTIKLWGLEKGFAVRT---LMHHSTCNTLALS-------SDGALIASGHFDGALRFWDVRSGRQAHEVAGLHSQQITSVCLGAS-GSMVLTCGKDNLLRCVDVRRFEVRHTLSAPAFTVGGAWTSACLSPSEQQAAAGSADGTIFLWDVPKGSVAARLREPK-------------------QAH--SAVACAWCPLGLP--LVSSDKAGGLTFWG 894          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A1Z5KI13_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI13_FISSO)

HSP 1 Score: 157 bits (398), Expect = 3.700e-37
Identity = 106/313 (33.87%), Postives = 151/313 (48.24%), Query Frame = 1
Query: 1105 GGVLLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYAAAAA-ANGNVYVWDIIANSXXXXXXXXXXXXXXXXXXXXXXXVATVLQTHGVAATGCDWCLNMPS--KLASCDSKGGLRVW 2034
            G  L+AT G DS VKVWD  +G  RA L G+    I   ++ D++ + V G  +D +C VWN+RT R    L GHQ KV  V    + + ++T S D SIKVWD++R  +  +T  +R +S  N +D++            + SGHM+GAVR WD+RSGS       LH   VTS+ F       +LTN  DS LK++D R    +    H DF T+ S+S    SP   +A AA+  +G +++W     S                       +   L  H       DW    PS  ++A+ D KG L +W
Sbjct:  265 GNDLVATCGMDSTVKVWDAGTGALRATLHGSTSYPI---LSCDVYDNLVAGASTDKTCRVWNVRTQRMLHHLVGHQHKVNCVRLNGSEKSVITASSDRSIKVWDINRTTYRQST-TLRHSSTTNCLDIASDPN-------TLCSGHMDGAVRGWDLRSGSRCFDFTELHGGGVTSIHFNLANSTEVLTNGLDSCLKLIDVRTGMPLQTFRHKDFVTSQSWSSGVLSPDGKFAVAASNESGALFIWYTNDGS-----------------------LRAKLDNHQSGVCAIDWNQGGPSGQQVATMDRKGSLILW 543          
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Match: A0A6V2HHW2_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HHW2_9STRA)

HSP 1 Score: 155 bits (392), Expect = 4.850e-36
Identity = 103/271 (38.01%), Postives = 140/271 (51.66%), Query Frame = 1
Query: 1036 LPSRCFQAIEAHSSGVNDVAFERGGV-LLATAGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGSCTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHRGQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMRSGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVACLTHPDFRTASSFSRACFSPSAAYA-AAAAANGNVYVWDI 1842
            LP+     I+AH      V ++  G+ L+AT   DS VKVWD  +G+ +A L+G +      M+ VD+    V G G+D +C VWN+RT R   +L GH  KV  V   +  + ++TGS D SIKVWD+ R  +  TT   R +S  N +DVS    DS      V             +RSG     +  +H   VTSV+  P  GN +LTN +DS L+VVD R    V  L H DFRTA ++S    SP  AYA A +   G V+VW +
Sbjct:  304 LPTTPKHVIQAHPIEATSVRYDGTGLDLIATGSSDSTVKVWDTNNGQVKATLRGGSGH---PMLGVDLSGGLVVGCGADKTCRVWNIRTQRMIHQLAGHSTKVTCVRLLNNEKGVITGSADRSIKVWDISRSTYKQTT-TFRHSSTSNCMDVS---LDS----LTVFXXXXXXXXXXXXVRSGKRVLDVLSMHEGGVTSVQCHPMNGNQILTNGRDSVLRVVDVRTCTAVQSLGHEDFRTAFNYSSCGISPDGAYALAGSGTTGEVFVWGL 563          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig8.14656.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL04_ECTSI4.460e-21264.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CNH8_9STRA1.610e-8035.35WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7R9WGS3_9STRA1.650e-5029.49Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2XSX3_9STRA2.780e-5040.59Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S3XT70_HETAK2.450e-4536.54Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2AAH2_TRICV7.400e-4539.92Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2Y1Y4_9STRA8.330e-4239.11Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A2P6VHV3_9CHLO1.330e-3734.02Autophagy-related 16 n=1 Tax=Micractinium conductr... [more]
A0A1Z5KI13_FISSO3.700e-3733.87Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A6V2HHW2_9STRA4.850e-3638.01Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig8contigP-fluviatile_contig8:3578944..3587553 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score621.3
Seed ortholog evalue5.1e-175
Seed eggNOG ortholog2880.D8LL04
KEGG koko:K17890
KEGG Pathwayko04136,ko04138,ko04140,ko04621,map04136,map04138,map04140,map04621
GOsGO:0000045,GO:0000421,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005776,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006897,GO:0006907,GO:0006909,GO:0006914,GO:0006950,GO:0006952,GO:0006996,GO:0007033,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0010498,GO:0016020,GO:0016043,GO:0016192,GO:0016236,GO:0016740,GO:0019538,GO:0019776,GO:0019941,GO:0022607,GO:0030163,GO:0030587,GO:0031090,GO:0031154,GO:0032502,GO:0032991,GO:0034274,GO:0035973,GO:0042742,GO:0043161,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043632,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0048856,GO:0050830,GO:0050896,GO:0051179,GO:0051234,GO:0051603,GO:0051703,GO:0051704,GO:0051707,GO:0061912,GO:0061919,GO:0070925,GO:0071704,GO:0071840,GO:0090382,GO:0090702,GO:0098542,GO:0098588,GO:0098657,GO:0098805,GO:0099120,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905037,GO:1990234
EggNOG free text desc.negative stranded viral RNA replication
EggNOG OGsKOG0288@1,KOG0288@2759
Ec32 orthologEc-11_006240.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03029,ko04131
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionWD40-repeat-containing domain
Ec32 orthologEc-11_006240.3
Exons13
Model size2472
Cds size1965
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817261.8246186-UTR-P-fluviatile_contig8:3578943..35793751622817261.8246186-UTR-P-fluviatile_contig8:3578943..3579375Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3578944..3579375 -
1693571792.0900352-UTR-P-fluviatile_contig8:3578943..35793751693571792.0900352-UTR-P-fluviatile_contig8:3578943..3579375Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3578944..3579375 -
1622817261.984731-UTR-P-fluviatile_contig8:3587478..35875531622817261.984731-UTR-P-fluviatile_contig8:3587478..3587553Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3587479..3587553 -
1693571792.4775891-UTR-P-fluviatile_contig8:3587478..35875531693571792.4775891-UTR-P-fluviatile_contig8:3587478..3587553Porterinema fluviatile SAG_2381UTRP-fluviatile_contig8 3587479..3587553 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817261.8400204-CDS-P-fluviatile_contig8:3579375..35797231622817261.8400204-CDS-P-fluviatile_contig8:3579375..3579723Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3579376..3579723 -
1693571792.1108375-CDS-P-fluviatile_contig8:3579375..35797231693571792.1108375-CDS-P-fluviatile_contig8:3579375..3579723Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3579376..3579723 -
1622817261.850546-CDS-P-fluviatile_contig8:3580308..35803801622817261.850546-CDS-P-fluviatile_contig8:3580308..3580380Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3580309..3580380 -
1693571792.127009-CDS-P-fluviatile_contig8:3580308..35803801693571792.127009-CDS-P-fluviatile_contig8:3580308..3580380Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3580309..3580380 -
1622817261.8609989-CDS-P-fluviatile_contig8:3580687..35807471622817261.8609989-CDS-P-fluviatile_contig8:3580687..3580747Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3580688..3580747 -
1693571792.1389945-CDS-P-fluviatile_contig8:3580687..35807471693571792.1389945-CDS-P-fluviatile_contig8:3580687..3580747Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3580688..3580747 -
1622817261.872146-CDS-P-fluviatile_contig8:3581123..35812761622817261.872146-CDS-P-fluviatile_contig8:3581123..3581276Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3581124..3581276 -
1693571792.3660343-CDS-P-fluviatile_contig8:3581123..35812761693571792.3660343-CDS-P-fluviatile_contig8:3581123..3581276Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3581124..3581276 -
1622817261.8828068-CDS-P-fluviatile_contig8:3582432..35825011622817261.8828068-CDS-P-fluviatile_contig8:3582432..3582501Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3582433..3582501 -
1693571792.382957-CDS-P-fluviatile_contig8:3582432..35825011693571792.382957-CDS-P-fluviatile_contig8:3582432..3582501Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3582433..3582501 -
1622817261.8956006-CDS-P-fluviatile_contig8:3582968..35831151622817261.8956006-CDS-P-fluviatile_contig8:3582968..3583115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3582969..3583115 -
1693571792.394431-CDS-P-fluviatile_contig8:3582968..35831151693571792.394431-CDS-P-fluviatile_contig8:3582968..3583115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3582969..3583115 -
1622817261.9066105-CDS-P-fluviatile_contig8:3583543..35839011622817261.9066105-CDS-P-fluviatile_contig8:3583543..3583901Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3583544..3583901 -
1693571792.4049573-CDS-P-fluviatile_contig8:3583543..35839011693571792.4049573-CDS-P-fluviatile_contig8:3583543..3583901Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3583544..3583901 -
1622817261.9176333-CDS-P-fluviatile_contig8:3584601..35847451622817261.9176333-CDS-P-fluviatile_contig8:3584601..3584745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3584602..3584745 -
1693571792.413731-CDS-P-fluviatile_contig8:3584601..35847451693571792.413731-CDS-P-fluviatile_contig8:3584601..3584745Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3584602..3584745 -
1622817261.929776-CDS-P-fluviatile_contig8:3585119..35852371622817261.929776-CDS-P-fluviatile_contig8:3585119..3585237Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3585120..3585237 -
1693571792.4223921-CDS-P-fluviatile_contig8:3585119..35852371693571792.4223921-CDS-P-fluviatile_contig8:3585119..3585237Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3585120..3585237 -
1622817261.9406433-CDS-P-fluviatile_contig8:3586165..35862691622817261.9406433-CDS-P-fluviatile_contig8:3586165..3586269Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3586166..3586269 -
1693571792.4326437-CDS-P-fluviatile_contig8:3586165..35862691693571792.4326437-CDS-P-fluviatile_contig8:3586165..3586269Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3586166..3586269 -
1622817261.9506319-CDS-P-fluviatile_contig8:3586504..35866081622817261.9506319-CDS-P-fluviatile_contig8:3586504..3586608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3586505..3586608 -
1693571792.4461186-CDS-P-fluviatile_contig8:3586504..35866081693571792.4461186-CDS-P-fluviatile_contig8:3586504..3586608Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3586505..3586608 -
1622817261.9632711-CDS-P-fluviatile_contig8:3586761..35868661622817261.9632711-CDS-P-fluviatile_contig8:3586761..3586866Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3586762..3586866 -
1693571792.4581542-CDS-P-fluviatile_contig8:3586761..35868661693571792.4581542-CDS-P-fluviatile_contig8:3586761..3586866Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3586762..3586866 -
1622817261.9740376-CDS-P-fluviatile_contig8:3587295..35874781622817261.9740376-CDS-P-fluviatile_contig8:3587295..3587478Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3587296..3587478 -
1693571792.4691684-CDS-P-fluviatile_contig8:3587295..35874781693571792.4691684-CDS-P-fluviatile_contig8:3587295..3587478Porterinema fluviatile SAG_2381CDSP-fluviatile_contig8 3587296..3587478 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig8.14656.1prot_P-fluviatile_contig8.14656.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig8 3579376..3587478 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig8.14656.1

>prot_P-fluviatile_contig8.14656.1 ID=prot_P-fluviatile_contig8.14656.1|Name=mRNA_P-fluviatile_contig8.14656.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=655bp
MSQGRATTDVEKHAQLLRGLGSKLRHRNLKQTSAFKDVFEAHKGLLHINE
KLRQQTIRQDQDIIILRHKLTEGLSQGESSEALRTIQGEMQRLQVQISDK
YRSSAEAASEQLRLMKEAQLLQDQLKHCNQRLERLQAEHGLSMSRCTSLE
HDNAALESALASLRKETESLRKLLGSKEADVVVFREQARKEREELVSRLL
NDKRSMLEEMNKMNEDNAALREEKKTFLARLQQQQQQQQDTTTAAQVRQR
ATSGAMGGDDERTEAGTAPAWLSQGKQKQGGAGGDSAAFANATATSFSSS
SACSASSFGGRNKVGPASAELPSRCFQAIEAHSSGVNDVAFERGGVLLAT
AGDDSYVKVWDPASGRQRAVLKGAAHKGIAAMITVDIHADTVCGGGSDGS
CTVWNLRTCREQARLTGHQQKVCAVAFCDAGQRLVTGSQDCSIKVWDLHR
GQWNATTCAMRATSKCNAVDVSHSWKDSKGTNAVVVSGHMNGAVRLWDMR
SGSCAHQLQGLHRDQVTSVRFAPGRGNLLLTNSKDSTLKVVDARMYQVVA
CLTHPDFRTASSFSRACFSPSAAYAAAAAANGNVYVWDIIANSSSSGGGC
AAAAAAVSGAGSSSSSVATVLQTHGVAATGCDWCLNMPSKLASCDSKGGL
RVWG*
back to top

mRNA from alignment at P-fluviatile_contig8:3578944..3587553-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig8.14656.1 ID=mRNA_P-fluviatile_contig8.14656.1|Name=mRNA_P-fluviatile_contig8.14656.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8610bp|location=Sequence derived from alignment at P-fluviatile_contig8:3578944..3587553- (Porterinema fluviatile SAG_2381)
GTGATGTCCAGTGCAATGTGATGTTCGTGTGGTGTCTGGTGGCATGGGAT GAGCCAAAGTCGACAGTGAAATAAGATGAGCCAAGGCAGGGCGACTACCG ATGTAGAGAAGCACGCGCAGTTACTGCGCGGTCTCGGTTCCAAGCTGCGA CATCGGAACCTGAAGCAAACGTCGGCGTTCAAGGATGTGTTCGAAGCTCA CAAGGGTCTGCTCCACATCAACGAGAAGCTCCGGCAACAAACGATTCGAC AAGACCAGGTAGCTGAACCGAGGGGCGGACTCAAGTTTTGTCTTTCTGCA CATGAAGATGGTCGTCGATTTCTTGGCATTAGCACACTGCGTGTGCCTGA ACGAGAGCTACACTCCTTTCACAACTGAGAACACCAAGCGCGGACATTCG AAAAATAGTCCGCCTGAGTGGAACTCTGTCTTCTGTTATCGTGGGAAGGG TACAGCAGCTTGCATATGGCGCGGAGTAAAGCAGAGGTAGGTTCCGGACT GGTCAGAAATTGCATGAATATCCCCTCTGCTGGTTTATCATTGGGTGCTT GGCGCCCGTGAAACTTGAAGTTTGCATGTGAAATTGTGAGTTATCAGACC TCTGCCCTGTGGTCGATAACCACACACGAAACATCGGACTCGAGGGTAGA GGCTGGTAATATCTTCCGTTTTGCCACAAACCCACAGGACATCATTATTC TGAGGCACAAGCTCACGGAGGGCCTGTCTCAGGGAGAGAGCTCAGAAGCT CTACGAACAATCCAGGGCGAGATGCAGCGCCTTCAAGTGCAGGTGAATCC GTGTCTGCTTATGCTTATACCCCGGGCTAGTATTGCAAGGAAGGGCGTTT TCTCTGGTATCCCCGCACATGTACACGTCTCGGCGGCGGCTTCGCCCGTG ACATCCTATCATGCTAAACTCAGACATAAACTTGCTCCGAACCAGATTTC CGACAAGTACCGCAGCAGCGCCGAGGCTGCCTCCGAGCAGCTGAGGCTCA TGAAGGAGGCACAGCTGCTGCAGGACCAGCTCAAGCATTGCAACCAGCGG TGAGCGAGAGTTAGGGTGTTGTAAGGAAAATGGTGCACTGAGAGCGCTTG AGCAACCGCGCAGTGGATACTTTCATCGTAGTGAGCAACACCCTGGAAAT CCGATTTGAAGAAAATCCAGCGCCCGACGAGCGCGTCCCTAGCTCCGATG TAATTCTTCCGTCTCGTGGTCCCGTCCTTTCCTTCCCCGTAGGCCTCACC CGTGCGGGTTTGTCTCCGCCCCCATTCCCTTCAGATTGGAGAGACTCCAA GCAGAGCACGGCCTGTCGATGTCGAGGTGCACAAGCCTGGAGCACGATAA CGCCGCGTTAGAATCGGCTCTCGCTTCGCTACGTAAAGGTGACGGTAAAC CAGCAACGACCCTAGTTTTTCTGCTGTCCTGGACCACTGCTGTTTTTCCC ACGCCACATGACATGGGTTGGCCACATGCTCATTTCGAGCCCTCACGTCT TTCGTGCCACGAGGATTGAGGGGCACCTCGGGGCGGGACAGGTTTGGACC GCACCCTTACTCAACACTCGTGCCTAGAAGCAACAAGGTCCTAACGATCC CTCTCGTAGGAATGTCCCCTTGATTTTTGTTTGTTGTAGCTGTCATTCGC GTCAATCGATCAACAGATAGAGCTACATGCCGGCTTTCCGGCTTGTGTCT CTCGGCTCGCTTTTGGTGCGTATTTGCAGAGTTCGTCCTGGTCATGTGAG AGTTATCTACTCATCGCGCGCGCTCTTTCACGGTGATTTCGACGCTTGCG TAGATAGCACCCTGGTGCTGCGATACTCCGTCCTCGAGATGCGCTCGGTC GACGAACGACACCGCTCGCCGACGATCAACGCTTTCTTGCTTCGTACCAA CGAGATCGTGCTTTCGTACCGGAGAATATGACCGTGCGATGGATTTCTGT TCGCTCCCCGGCCCGAGGGCATGGAGGGTTGGGGTTTCTCGCGCCAGGGC ATTGCGCCCCCTCTCGTTGATTCAAATGCGAAGGTGTTGATTCGAACGCA AAGAAGGAGTTGGTTCTAATGCGAAGACGGCGTTGATTCTAGGAAGTGCA TTACATTGTACCAGGATTGTGTCTCGCTCTCTCATTGACTCCCCTGTCTT GGTGTGATTTTTCGGCTGCATGCTTTGCTCTCCGGAAAGTATGTAGAAGA TCAACATCATCAACGGCAGCGCCAGCAGAGGTTGTCACAACCACAACAAC AGAAGCAGCAGCAGCAGCAGCAAAAACTTTTTTGACCTCTCTTATACTTC ATGTTTCCCGTTGCAGAGACTGAATCGCTGAGGAAGCTGCTCGGAAGCAA GGAGGCGGATGTGGTTGTTTTCAGAGAGCAGGCGAGGAAGGAAAGGGAGG AGCTAGTGTCCCGCCTTCTGAACGATAAAAGAAGGTGAGATTCCTGTTGT TGTACACTGCTTGTGTTCCAGTGGAAAGACGGGCGAGAGAGTGCGGGAGG CCACGTCATGGTTTCGAACTTCAGGATGTATGGATTATATTCTTCGTGCA CTGCATGTTGAAAGGCGGGGGGAATCGACTGTCCCACTTGGCTTTCAGAA CTTATGCCCTCCACAAAAATGCATACAACACGTGATGAGACACGTGTGCG TTCCTATTAGCACCCATGCCGGCGATTTTCATTGTGCAGTCATCATAAAG TGCAGGGTGCTATGCGCGGGCAACACCCACAAAGTTTGCGTCTCGCCTTT GGCCTCCTTCACGAAATGCGGCGTGATCATCCCGGTGCCCGCGTCTGTAT CGTGGTAGCATGCTGGAGGAGATGAACAAGATGAATGAGGACAACGCCGC CCTCAGAGAGGAAAAGAAAACCTTCCTAGCCAGATTGCAGCAGCAGCAGC AGCAACAACAAGACACCACGACTGCGGCACAAGTACGGCAGAGAGCTACG AGGTACGGAGGGATTCACGTACGGTATGTCGTGTAGGGGGCGCGACACCT CTTCCTTCATTGCCACAAATTACCGCGGAGGAGAGCGATCCTTGGCTCGG CTTGTGCGAGGAGTATTAACTTGTGCACTGCCAACCTAATTTTCCCCCTA ATAAATCACCACGGGCTCAGCCGTGTCTTTTGCTAACCTTTCACCTCAGT ACTGGTGCCCGCATTCAAACATAGATCCCCGCCCCCCACGAGCATAGACT GTTTGTTGTTCCCCGGACGTCTGTTTTTGAGCGGAGTGTGCCTCCTGCCT TTCCGAAAGGCCGCCGTCCGCCGCGTTGTGTGGTAGTCTTGAGACTGGTT GAAATCAACCGCGCTGCCGTCTAGTGTAGCGCAGAAGGGCCGCTTAACGC ATGAGAGTCCAGGCCATACCTACAATTCTTGCTTCCAACGAGTGGCCGCG CTGTTCACGCTGTTACAAAAATTCACGAACGAAGACTTCCCGTCAAACGG TCTTCTCCGGCTGGCCAATCGCCGTTCCTTGAAGAACGCGGCCGGTATTG CGCTCCTTTTGTCCGCACACATTCACGACACCACCAAAACCACTGCGGCG TAGAAACTCGAAAGCGCTGACAAGGCTAAAGCAATACGGCTTGCCCACAA ACCGCATCGAACCACGCCCCTGCTTCGCCTCTACCTCGCGTCGGCGGCGC AGCGGTGCCATGGGTGGCGACGACGAGCGGACGGAGGCCGGGACAGCGCC AGCGTGGCTGTCGCAGGGGAAACAAAAACAGGGCGGCGCGGGCGGCGACA GCGCCGCTTTCGCCAATGCTACTGCGACTTCGTTCTCCTCCTCCTCCGCC TGCTCTGCATCGTCTTTTGGGGGCCGGAACAAGGTCGGGCCGGCCTCCGC GGAGCTCCCGAGCCGTTGCTTTCAGGCGATAGAGGCGCACTCTTCCGGCG TAAACGACGTGGCGTTCGAGAGGGGGGGCGTGTTGCTGGCTACGGCCGGG GACGACTCGTACGTCAAGGTGTGGGACCCCGCATCAGGGCGGCAGAGGGC GGTGCTCAAGGTGAGGGAAGGCTTGGGGTAAGCGATGTGATCGCGATTTT TGGACGTGTGTGCGTGCAGATGTGGCCGCCCGCTGTACGATTGCACAAAT ACGCGCGAAGTAGGACACGGAAGCGGCCGAACACGCAGATGAAAGCGGTG GTGTACTCTTTTTTTGCGTCATACTGCGTGCTTCGAGGTTTGCCATGGTG TGGGATTTGTGCTGAGTGGGGCGTCCTCTCCACAGTGCCGGGTGACGGTT TTGGTCCTTGAGTCTCTCCCAACCTTGTCTGCAATTAGTCGTGGGCCTAC TTTCCTCAGTTTCTCCTTCACTGAATAGGGTACCCTGAGCAGTACACTTG CAAACTACCGCTTCTATCCCGGCAATCGCTTCCCACTCATATTCAGTCTC CAACCACGCGCGTCGACTTGCTTCCCTACCGTTCCCAGGGTGCCGCTCAC AAGGGGATAGCTGCCATGATCACCGTGGACATTCACGCGGACACGGTGTG CGGGGGGGGCTCCGACGGCAGCTGCACCGTGTGGAACCTCAGGACCTGCA GAGAGCAGGCCCGGCTCACGGGGCACCAGCAGAAGGTCGGTGTGTCTGGC ATTTCGGTGTCGCTTTGTGACTTCTCGTCGTCTGAAGTGCCGCGCAGTCA TGGCCAGGCGTGCCCGGCGCTAGATGGGAGCCTGCAAAACGCCGGGAAAT ATCCGGGTCACGCGAGGATCTACGCCGCAACTTGTTGCGTTTGCTGCAGT GGGAGTGGTATCCTCGCACGAGCATACGATGCGGGTTTTTATATTTTGTG GTGGTTCGCGTGATTTCCTGTCGTGCATTTTGAGAGGGCGGCTTTTCTCT GGAGTTGGTTCGTTCACGACATCGACCATGACGGTGTCGACACTCCGAGT TGTTGGCGTAATACCACCGACGTAGTGAACCAACCGCTCTGAAACCGTGG GTGCAGACAGAACGGGAGGACGCAAGGGATGAAACTGCCGCAAAGCCGTC ATTTTTTCCACTGTTCACACGAAGAGCAAAAATTTCTCCACATTTTTCAC AGGTTTGCGCGGTGGCATTCTGCGACGCTGGACAGCGTCTGGTTACCGGG AGCCAGGACTGCTCCATCAAGGTGTGGATTTACGCCATATAGTATTAATT ACCCTGGAAGCCCCGTATCGTTGCCAGAGTTGGCTTGCCGTTGTCGCCCT TCTGTCGCAAAGGGGAATTCTCTTGTTCTGTCGTTTGCCATGCAGCCCCT GCTGCTTACGACGCTATTGCGTGCCGGGAAAATGTGTTCTATCGCCTTGA TGCGTGTGTGACGTGCGCGGTGTTTTATATTCCCGCTCCGCTCGATGCTT TTGTATTTGAAATGATTCATCGACGAGATGATGGTTTTCTTGGAATATCT ATGTCGCAGCTTGGATCAGGTGCTAGGCCCGCCGGCAACAGTCAACATGT TTGGCCTTGTTGTGCGCAACCGTGTGCATCAGCCGTAAGCCGTGAGGTCG ATAGCCTTGTATGTATTTTTTTTATTATGTGGAACCTTCAATATCTTTCG AATCTCGCTCAACCGGGCGCAAGAAGAAGGCGATGGCCGATGGAAACAAA GACCGCCGTTTGAGCATGTGCTCATCAGGCGGAGGGCTCTCGCCGACAAC AGACTGGTGATTTCTGGTCTTCGTGTGCGCCATAGTGGACATGAGCCATT ATGGACATGAGCCATAGTGGACATGAGCCATTATGGACATGAGCCATTGT GGACATGAGCCATTATGGACATGAGCCATTATGGACATGAGCCATTGTGG ACATGAGCCATTATGGACATGAGCCATTGTGGACATGAGCCATAGTGGAC ATGAGCCATTATGGACATGAGCCATTGTGGACATGAGCCGAGCGCCCGGT AGCCCCGAAAGGATTTCATTTCGGGCGTGTTGGACCTCTTCAAAGTCTTT AGAATCGCGCTTTCGCGGGTGTAAGACCTTTGTCGAAGGCGATGGGCGAC ACAAGCACGAATACCACCACCGTTGCTGCCGCTGTCCCCGCCGCCAATGA CCATCACGAGCGAATTGATGTTCTCATTCGCCGCGAAACACCCAGATTCT CTTCAGGATAAGAATGCTTCCTGCTATCTGGGATTGGGAAAAGGGTAATA CGAGCTTCAGCACAAGAGCAAACAATGTTGCGGAGCGATTGCCCCGTGCT ACACCGGACAGTGGACTCAACCGGCGGATTTGAGGGCCAATGATCTGGAC TGCCCGTTCTCCTGGTTTCCTTGCCAGGTGTGGGATCTTCACCGAGGACA GTGGAACGCCACGACTTGCGCCATGCGGGCAACCTCTAAGTGCAACGCCG TCGACGTCAGCCACAGCTGGAAGGACTCCAAGGGCACCAACGCCGTGGTA GTGTCGGGGCACATGAACGGCGCTGTGCGGGTAGGTGGTGCACGTGTGTA GTACCAGAGCCTTAGGTGACCCGGCACTGCCCTTCGGCGTGGGGGAGGCA GGCGTGGTTGGATTTTGAACCGAAACACTGTTGTTGAAGATGGCGGCCCT TTGTGGTAGTGCTGCAGATTTTATTGTGTCTTGATTTCTCCTTGCGGATG GTTGCTCTGGATACGGCGGCATATCGCTAGCTACTCTCGACGGTGGGTGT TGGCTTGACGTTAGATATTCACGACACGTGTTTCATGATAGCAAGAAGGC GACGGTCCCCTTTGATAATTGAAGAGAGGGTTGAACCCCACACATTTTTG TGCGTTCCTTCCTTGCCGCCCTCTTGCTCGGCTTTTTGGACACGATCGGT CCATAGCTCTGGGACATGCGATCTGGCAGCTGTGCGCATCAACTACAGGG GTTGCACAGAGACCAAGTGAGACAGAGAGTCGTCAAATCGTATGGCATGC AGGAAAAAGAGGAATGGCGTATCGCGAGTAAGTCATGCACTATGTGGTAT ACGGTTTTGATGTTTTGGGTTTCCCTTGATGGGCGCGTTCATTGCCCTCC TTTTGCTGCCTTCCTCTCTCAATTGGTGATTTCCTGTCTAGTCGTCTCCA TGCCTTCCCTTCCCTTCTCGCCATGGTTATCTCTCCCCCTATCTGTGTCT TTGTCTCCTCTACGTTGCCCCCCCTTGCGCTCCCTCTGATTCGTCCTTGG ACCTGTCCTGTCGTCCATCGCAGGTCACGTCCGTCCGGTTCGCTCCAGGC AGGGGAAACCTCCTTCTTACCAACTCCAAAGACAGTACGCTGAAGGTGGG ATGCAAGTGAACCAAGCGTGGCTCGTGCCTAGAGCTATTCGTGAGCAAAA AGTTGAGATGGACTTCTATCCTCGCGTGATATGATGTGGTTTTAGATGGC GACGACGGTTGTTGTATTCTCATCCCCCCCCCTGTCTTCCTGCGGGAACA ATGCTCCGTCCTCTCGAGGACGCGTGGTCGATGGTCTAACAACTACGGCA TGCAAAACATGAGTACGCCCCCCCATGTCTTGCTCTACAATCCAACGGTA GACGAGTTCCCAGAGTGAGGGGAGCGGGCGGCTGGCAGCCGGCACTAATC GGTCGCGCGCAACAGTCAGTTACCCGTGTGCCACACATTTTTGCCATTCC GAGGCGCAGCATCTTCGGCGCGAAGTACCACATATTGACGGTGCAGCTCC CAAACGATATTTCCTCTCACGCTACCTTCTCTCAAGTAAAGACTTCCGCG TCCTCACTGCTCTAATCTTGCTCGCTTTCTTTCTCCCCGTCCCTGCCTAT CTGTCTGTCTGTCTCTCTCGTTGCGGGTGTGTCTCTCCCTTCTGCCCCCC CACCCCCTACTTCGTTCTTCTAATCTACAGGTGGTGGACGCGCGGATGTA CCAGGTGGTAGCATGCCTCACCCACCCCGACTTCCGCACCGCATCCAGCT TTTCCCGTGCCTGCTTTAGCCCCTCCGCTGCTTACGCCGCGGCCGCGGCG GCGAACGGCAACGTTTACGTGTGGGACATCATAGCGAACAGCAGCAGCAG TGGTGGTGGTTGTGCTGCTGCAGCCGCGGCGGTCTCAGGCGCGGGATCTT CGTCGTCTTCGGTGGCGACGGTATTGCAGACTCACGGGGTGGCGGCGACG GGGTGCGACTGGTGCCTCAACATGCCGAGCAAGCTAGCGTCGTGTGATTC CAAGGGCGGACTGCGCGTTTGGGGCTGAATGAAGCTGCACGCTGACGGTG ACGACCACTGGAGGGTCTTACAGCGGTTCGTTGACCCCTCCTATACTGCA TTTTCACATGCTGTGTAGGATGAGCTTGGTATGGCGGAACACCTTTCATG GATCGCCTCGGCAAGAAGACCTTACTTGGCAACGTCCAGTCTACTAAATG TTGCGATGCAATGCATCAAAGCGGCCATTATCCCGATATTTGAATGTTTT CGAATCTTGTAACAGGATTGAGTGGTTCGTATGATACGGCATCTCAAACA ACGGTCTGTTGAGTTTTGTAGGCGTGGTGCAGGCGTGCCTTTTGTGTTAA TATTCCATTAAATTTTGTCCTGTGCGTCGGCTTCGCTTGACTTTATACAC CATCCGTTCACTTTGATAACGATGGCTTTCCTCACCTCCCCCAGGTGGAC CGTGCAGCCG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig8:3578944..3587553-

>mRNA_P-fluviatile_contig8.14656.1 ID=mRNA_P-fluviatile_contig8.14656.1|Name=mRNA_P-fluviatile_contig8.14656.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3930bp|location=Sequence derived from alignment at P-fluviatile_contig8:3578944..3587553- (Porterinema fluviatile SAG_2381)
ATGAGCCAAGGCAGGGCGACTACCGATGTAGAGAAGCACGCGCAGTTACT
GCGCGGTCTCGGTTCCAAGCTGCGACATCGGAACCTGAAGCAAACGTCGG
CGTTCAAGGATGTGTTCGAAGCTCACAAGGGTCTGCTCCACATCAACGAG
AAGCTCCGGCAACAAACGATTCGACAAGACCAGATGAGCCAAGGCAGGGC
GACTACCGATGTAGAGAAGCACGCGCAGTTACTGCGCGGTCTCGGTTCCA
AGCTGCGACATCGGAACCTGAAGCAAACGTCGGCGTTCAAGGATGTGTTC
GAAGCTCACAAGGGTCTGCTCCACATCAACGAGAAGCTCCGGCAACAAAC
GATTCGACAAGACCAGGACATCATTATTCTGAGGCACAAGCTCACGGAGG
GCCTGTCTCAGGGAGAGAGCTCAGAAGCTCTACGAACAATCCAGGGCGAG
ATGCAGCGCCTTCAAGTGCAGGACATCATTATTCTGAGGCACAAGCTCAC
GGAGGGCCTGTCTCAGGGAGAGAGCTCAGAAGCTCTACGAACAATCCAGG
GCGAGATGCAGCGCCTTCAAGTGCAGATTTCCGACAAGTACCGCAGCAGC
GCCGAGGCTGCCTCCGAGCAGCTGAGGCTCATGAAGGAGGCACAGCTGCT
GCAGGACCAGCTCAAGCATTGCAACCAGCGATTTCCGACAAGTACCGCAG
CAGCGCCGAGGCTGCCTCCGAGCAGCTGAGGCTCATGAAGGAGGCACAGC
TGCTGCAGGACCAGCTCAAGCATTGCAACCAGCGATTGGAGAGACTCCAA
GCAGAGCACGGCCTGTCGATGTCGAGGTGCACAAGCCTGGAGCACGATAA
CGCCGCGTTAGAATCGGCTCTCGCTTCGCTACGTAAAGATTGGAGAGACT
CCAAGCAGAGCACGGCCTGTCGATGTCGAGGTGCACAAGCCTGGAGCACG
ATAACGCCGCGTTAGAATCGGCTCTCGCTTCGCTACGTAAAGAGACTGAA
TCGCTGAGGAAGCTGCTCGGAAGCAAGGAGGCGGATGTGGTTGTTTTCAG
AGAGCAGGCGAGGAAGGAAAGGGAGGAGCTAGTGTCCCGCCTTCTGAACG
ATAAAAGAAGAGACTGAATCGCTGAGGAAGCTGCTCGGAAGCAAGGAGGC
GGATGTGGTTGTTTTCAGAGAGCAGGCGAGGAAGGAAAGGGAGGAGCTAG
TGTCCCGCCTTCTGAACGATAAAAGAAGCATGCTGGAGGAGATGAACAAG
ATGAATGAGGACAACGCCGCCCTCAGAGAGGAAAAGAAAACCTTCCTAGC
CAGATTGCAGCAGCAGCAGCAGCAACAACAAGACACCACGACTGCGGCAC
AAGTACGGCAGAGAGCTACGAGCATGCTGGAGGAGATGAACAAGATGAAT
GAGGACAACGCCGCCCTCAGAGAGGAAAAGAAAACCTTCCTAGCCAGATT
GCAGCAGCAGCAGCAGCAACAACAAGACACCACGACTGCGGCACAAGTAC
GGCAGAGAGCTACGAGCGGTGCCATGGGTGGCGACGACGAGCGGACGGAG
GCCGGGACAGCGCCAGCGTGGCTGTCGCAGGGGAAACAAAAACAGGGCGG
CGCGGGCGGCGACAGCGCCGCTTTCGCCAATGCTACTGCGACTTCGTTCT
CCTCCTCCTCCGCCTGCTCTGCATCGTCTTTTGGGGGCCGGAACAAGGTC
GGGCCGGCCTCCGCGGAGCTCCCGAGCCGTTGCTTTCAGGCGATAGAGGC
GCACTCTTCCGGCGTAAACGACGTGGCGTTCGAGAGGGGGGGCGTGTTGC
TGGCTACGGCCGGGGACGACTCGTACGTCAAGGTGTGGGACCCCGCATCA
GGGCGGCAGAGGGCGGTGCTCAAGCGGTGCCATGGGTGGCGACGACGAGC
GGACGGAGGCCGGGACAGCGCCAGCGTGGCTGTCGCAGGGGAAACAAAAA
CAGGGCGGCGCGGGCGGCGACAGCGCCGCTTTCGCCAATGCTACTGCGAC
TTCGTTCTCCTCCTCCTCCGCCTGCTCTGCATCGTCTTTTGGGGGCCGGA
ACAAGGTCGGGCCGGCCTCCGCGGAGCTCCCGAGCCGTTGCTTTCAGGCG
ATAGAGGCGCACTCTTCCGGCGTAAACGACGTGGCGTTCGAGAGGGGGGG
CGTGTTGCTGGCTACGGCCGGGGACGACTCGTACGTCAAGGTGTGGGACC
CCGCATCAGGGCGGCAGAGGGCGGTGCTCAAGGGTGCCGCTCACAAGGGG
ATAGCTGCCATGATCACCGTGGACATTCACGCGGACACGGTGTGCGGGGG
GGGCTCCGACGGCAGCTGCACCGTGTGGAACCTCAGGACCTGCAGAGAGC
AGGCCCGGCTCACGGGGCACCAGCAGAAGGGTGCCGCTCACAAGGGGATA
GCTGCCATGATCACCGTGGACATTCACGCGGACACGGTGTGCGGGGGGGG
CTCCGACGGCAGCTGCACCGTGTGGAACCTCAGGACCTGCAGAGAGCAGG
CCCGGCTCACGGGGCACCAGCAGAAGGTTTGCGCGGTGGCATTCTGCGAC
GCTGGACAGCGTCTGGTTACCGGGAGCCAGGACTGCTCCATCAAGGTTTG
CGCGGTGGCATTCTGCGACGCTGGACAGCGTCTGGTTACCGGGAGCCAGG
ACTGCTCCATCAAGGTGTGGGATCTTCACCGAGGACAGTGGAACGCCACG
ACTTGCGCCATGCGGGCAACCTCTAAGTGCAACGCCGTCGACGTCAGCCA
CAGCTGGAAGGACTCCAAGGGCACCAACGCCGTGGTAGTGTCGGGGCACA
TGAACGGCGCTGTGCGGGTGTGGGATCTTCACCGAGGACAGTGGAACGCC
ACGACTTGCGCCATGCGGGCAACCTCTAAGTGCAACGCCGTCGACGTCAG
CCACAGCTGGAAGGACTCCAAGGGCACCAACGCCGTGGTAGTGTCGGGGC
ACATGAACGGCGCTGTGCGGCTCTGGGACATGCGATCTGGCAGCTGTGCG
CATCAACTACAGGGGTTGCACAGAGACCAACTCTGGGACATGCGATCTGG
CAGCTGTGCGCATCAACTACAGGGGTTGCACAGAGACCAAGTCACGTCCG
TCCGGTTCGCTCCAGGCAGGGGAAACCTCCTTCTTACCAACTCCAAAGAC
AGTACGCTGAAGGTCACGTCCGTCCGGTTCGCTCCAGGCAGGGGAAACCT
CCTTCTTACCAACTCCAAAGACAGTACGCTGAAGGTGGTGGACGCGCGGA
TGTACCAGGTGGTAGCATGCCTCACCCACCCCGACTTCCGCACCGCATCC
AGCTTTTCCCGTGCCTGCTTTAGCCCCTCCGCTGCTTACGCCGCGGCCGC
GGCGGCGAACGGCAACGTTTACGTGTGGGACATCATAGCGAACAGCAGCA
GCAGTGGTGGTGGTTGTGCTGCTGCAGCCGCGGCGGTCTCAGGCGCGGGA
TCTTCGTCGTCTTCGGTGGCGACGGTATTGCAGACTCACGGGGTGGCGGC
GACGGGGTGCGACTGGTGCCTCAACATGCCGAGCAAGCTAGCGTCGTGTG
ATTCCAAGGGCGGACTGCGCGTTTGGGGCTGAGTGGTGGACGCGCGGATG
TACCAGGTGGTAGCATGCCTCACCCACCCCGACTTCCGCACCGCATCCAG
CTTTTCCCGTGCCTGCTTTAGCCCCTCCGCTGCTTACGCCGCGGCCGCGG
CGGCGAACGGCAACGTTTACGTGTGGGACATCATAGCGAACAGCAGCAGC
AGTGGTGGTGGTTGTGCTGCTGCAGCCGCGGCGGTCTCAGGCGCGGGATC
TTCGTCGTCTTCGGTGGCGACGGTATTGCAGACTCACGGGGTGGCGGCGA
CGGGGTGCGACTGGTGCCTCAACATGCCGAGCAAGCTAGCGTCGTGTGAT
TCCAAGGGCGGACTGCGCGTTTGGGGCTGA
back to top